Query 000517
Match_columns 1449
No_of_seqs 938 out of 4814
Neff 7.6
Searched_HMMs 46136
Date Mon Apr 1 17:38:43 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000517.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000517hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 2E-252 5E-257 2329.5 96.6 1342 48-1449 12-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 9E-238 2E-242 2363.3 144.3 1426 20-1449 8-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 6E-186 1E-190 1872.0 134.2 1282 112-1444 2-1389(1394)
4 PLN03211 ABC transporter G-25; 100.0 1.9E-94 4.2E-99 914.7 64.8 584 845-1446 36-659 (659)
5 KOG0061 Transporter, ABC super 100.0 3.3E-94 7.2E-99 902.8 58.3 579 845-1448 22-611 (613)
6 TIGR00955 3a01204 The Eye Pigm 100.0 7.2E-94 1.6E-98 911.7 61.8 567 872-1449 36-617 (617)
7 TIGR00956 3a01205 Pleiotropic 100.0 9.4E-91 2E-95 942.7 64.5 564 872-1446 72-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 8E-90 1.7E-94 928.2 61.4 566 872-1445 176-789 (1470)
9 KOG0061 Transporter, ABC super 100.0 1.8E-81 4E-86 787.7 59.1 583 133-793 21-609 (613)
10 KOG0065 Pleiotropic drug resis 100.0 8.3E-83 1.8E-87 800.8 40.7 566 872-1447 126-732 (1391)
11 PLN03211 ABC transporter G-25; 100.0 5.4E-79 1.2E-83 773.7 65.9 609 132-792 34-658 (659)
12 TIGR00955 3a01204 The Eye Pigm 100.0 1.8E-79 4E-84 779.8 60.3 569 181-792 35-613 (617)
13 KOG0055 Multidrug/pheromone ex 100.0 2.6E-72 5.5E-77 709.2 57.8 213 847-1086 986-1208(1228)
14 TIGR01257 rim_protein retinal- 100.0 4.9E-69 1.1E-73 724.4 79.1 802 184-1097 943-2161(2272)
15 KOG0054 Multidrug resistance-a 100.0 2.9E-68 6.2E-73 689.3 56.3 735 184-1087 534-1358(1381)
16 PLN03130 ABC transporter C fam 100.0 2.3E-65 5E-70 701.2 67.6 211 848-1087 1237-1457(1622)
17 PLN03232 ABC transporter C fam 100.0 1.2E-64 2.5E-69 695.3 63.2 210 848-1086 1234-1453(1495)
18 COG1123 ATPase components of v 100.0 3E-64 6.5E-69 599.5 49.8 474 184-1086 22-514 (539)
19 PTZ00265 multidrug resistance 100.0 7E-63 1.5E-67 670.7 65.3 216 848-1086 1165-1447(1466)
20 PRK13549 xylose transporter AT 100.0 1.6E-63 3.5E-68 623.1 51.1 458 185-1089 19-492 (506)
21 PRK10762 D-ribose transporter 100.0 2.2E-63 4.8E-68 621.2 50.0 450 185-1089 18-482 (501)
22 PRK09700 D-allose transporter 100.0 2E-63 4.3E-68 623.4 49.2 457 185-1086 19-493 (510)
23 TIGR00957 MRP_assoc_pro multi 100.0 8.4E-62 1.8E-66 667.9 69.0 211 848-1087 1284-1504(1522)
24 PRK10261 glutathione transport 100.0 3.9E-63 8.5E-68 630.9 49.6 488 184-1087 29-549 (623)
25 PRK15134 microcin C ABC transp 100.0 1.3E-62 2.9E-67 618.1 49.6 464 184-1086 22-510 (529)
26 PRK15439 autoinducer 2 ABC tra 100.0 1.4E-62 3.1E-67 614.1 49.3 454 184-1088 24-489 (510)
27 TIGR03269 met_CoM_red_A2 methy 100.0 2.5E-62 5.3E-67 614.9 50.8 445 184-1086 13-512 (520)
28 TIGR02633 xylG D-xylose ABC tr 100.0 5.3E-62 1.1E-66 609.5 51.5 460 184-1087 14-488 (500)
29 PRK11288 araG L-arabinose tran 100.0 4.1E-62 8.9E-67 609.8 49.7 452 185-1090 18-484 (501)
30 PTZ00243 ABC transporter; Prov 100.0 4.2E-60 9.2E-65 648.9 68.9 210 848-1086 1308-1528(1560)
31 TIGR01271 CFTR_protein cystic 100.0 5.9E-60 1.3E-64 647.6 68.2 209 848-1086 1217-1435(1490)
32 PRK10982 galactose/methyl gala 100.0 5.8E-61 1.3E-65 598.4 47.8 451 184-1088 11-477 (491)
33 PRK10938 putative molybdenum t 100.0 7.1E-60 1.5E-64 588.9 43.9 447 185-1084 17-485 (490)
34 COG4172 ABC-type uncharacteriz 100.0 2.1E-57 4.6E-62 506.1 44.0 469 183-1086 22-511 (534)
35 PRK11819 putative ABC transpor 100.0 2.7E-57 5.8E-62 571.9 50.8 201 848-1085 324-527 (556)
36 PRK15064 ABC transporter ATP-b 100.0 2.8E-57 6.1E-62 570.0 49.9 198 848-1086 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 8.4E-57 1.8E-61 567.4 50.6 201 848-1085 322-525 (552)
38 PRK10636 putative ABC transpor 100.0 2.2E-54 4.8E-59 550.8 52.3 197 848-1086 312-512 (638)
39 PRK13409 putative ATPase RIL; 100.0 3.6E-55 7.7E-60 549.7 42.5 197 876-1100 354-554 (590)
40 PRK11147 ABC transporter ATPas 100.0 3.6E-54 7.8E-59 550.5 50.8 202 848-1086 319-523 (635)
41 COG1129 MglA ABC-type sugar tr 100.0 1.4E-53 3.1E-58 505.3 44.3 452 182-1087 19-486 (500)
42 COG0488 Uup ATPase components 100.0 9.1E-52 2E-56 504.5 43.5 220 183-432 15-239 (530)
43 PLN03073 ABC transporter F fam 100.0 7.7E-51 1.7E-55 518.6 53.9 200 848-1086 508-709 (718)
44 COG3845 ABC-type uncharacteriz 100.0 5.8E-50 1.3E-54 463.0 41.3 457 183-1088 16-489 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 1.6E-44 3.5E-49 377.3 21.2 207 869-1086 10-220 (240)
46 KOG0927 Predicted transporter 100.0 9.9E-42 2.1E-46 394.7 31.0 200 848-1086 389-591 (614)
47 COG1126 GlnQ ABC-type polar am 100.0 3.5E-42 7.6E-47 359.8 20.0 221 183-454 14-238 (240)
48 COG1131 CcmA ABC-type multidru 100.0 1.3E-41 2.9E-46 392.9 23.9 213 870-1098 13-229 (293)
49 COG1127 Ttg2A ABC-type transpo 100.0 9.5E-42 2.1E-46 362.0 20.7 222 870-1102 17-250 (263)
50 COG1135 AbcC ABC-type metal io 100.0 1.3E-41 2.9E-46 372.8 18.8 203 873-1087 18-227 (339)
51 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 6.9E-41 1.5E-45 367.7 23.4 218 848-1088 4-224 (254)
52 COG1120 FepC ABC-type cobalami 100.0 2.7E-41 5.8E-46 373.1 20.1 209 871-1088 12-225 (258)
53 COG1135 AbcC ABC-type metal io 100.0 2.9E-41 6.3E-46 370.1 19.6 223 183-456 18-246 (339)
54 TIGR01257 rim_protein retinal- 100.0 3.7E-36 8.1E-41 407.1 73.1 216 847-1086 927-1144(2272)
55 COG1125 OpuBA ABC-type proline 100.0 3.3E-41 7.1E-46 358.3 17.6 207 869-1087 9-221 (309)
56 COG1116 TauB ABC-type nitrate/ 100.0 7.6E-41 1.6E-45 361.7 19.9 192 873-1077 15-207 (248)
57 COG3638 ABC-type phosphate/pho 100.0 7E-41 1.5E-45 354.5 18.1 214 872-1094 15-240 (258)
58 COG4555 NatA ABC-type Na+ tran 100.0 9.7E-41 2.1E-45 343.2 16.0 201 875-1087 16-218 (245)
59 COG1136 SalX ABC-type antimicr 100.0 4.8E-40 1E-44 356.3 21.9 193 874-1079 18-219 (226)
60 COG1131 CcmA ABC-type multidru 100.0 5.3E-40 1.1E-44 379.7 22.9 212 183-437 17-230 (293)
61 COG1120 FepC ABC-type cobalami 100.0 3E-40 6.5E-45 364.8 18.9 209 184-432 15-227 (258)
62 COG1118 CysA ABC-type sulfate/ 100.0 3.8E-40 8.2E-45 360.1 18.8 207 871-1087 12-223 (345)
63 COG3839 MalK ABC-type sugar tr 100.0 9.1E-40 2E-44 374.3 20.2 217 186-453 18-235 (338)
64 COG3839 MalK ABC-type sugar tr 100.0 8.2E-40 1.8E-44 374.7 19.5 206 871-1088 13-220 (338)
65 COG1125 OpuBA ABC-type proline 100.0 1.2E-39 2.5E-44 346.5 19.0 208 183-433 13-225 (309)
66 COG3842 PotA ABC-type spermidi 100.0 5.9E-40 1.3E-44 377.8 18.1 223 183-455 17-240 (352)
67 COG1117 PstB ABC-type phosphat 100.0 1.8E-39 3.9E-44 337.3 19.5 218 848-1087 7-233 (253)
68 COG2884 FtsE Predicted ATPase 100.0 2.6E-39 5.6E-44 330.4 20.1 200 874-1086 15-221 (223)
69 COG3638 ABC-type phosphate/pho 100.0 1.3E-39 2.8E-44 344.8 18.6 216 183-433 16-237 (258)
70 COG1118 CysA ABC-type sulfate/ 100.0 1.9E-39 4.1E-44 354.6 19.3 223 183-454 14-240 (345)
71 COG1116 TauB ABC-type nitrate/ 100.0 2.6E-39 5.6E-44 349.8 19.4 192 184-420 16-207 (248)
72 COG1127 Ttg2A ABC-type transpo 100.0 5.8E-39 1.2E-43 340.8 21.4 209 183-433 20-235 (263)
73 COG1136 SalX ABC-type antimicr 100.0 5.6E-39 1.2E-43 348.0 21.3 195 184-422 18-220 (226)
74 COG3842 PotA ABC-type spermidi 100.0 1.7E-39 3.7E-44 374.0 17.7 208 870-1088 14-223 (352)
75 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.5E-38 3.3E-43 349.2 24.3 208 185-433 18-227 (254)
76 PRK13537 nodulation ABC transp 100.0 3.2E-38 6.8E-43 368.5 26.1 214 848-1086 7-222 (306)
77 COG4555 NatA ABC-type Na+ tran 100.0 5.1E-39 1.1E-43 330.5 16.6 207 183-433 14-222 (245)
78 COG1117 PstB ABC-type phosphat 100.0 1.2E-38 2.6E-43 331.1 17.3 222 184-453 20-249 (253)
79 COG1137 YhbG ABC-type (unclass 100.0 7E-39 1.5E-43 329.2 14.4 213 866-1088 9-225 (243)
80 TIGR02314 ABC_MetN D-methionin 100.0 1.1E-37 2.4E-42 366.5 26.0 202 874-1087 18-226 (343)
81 cd03261 ABC_Org_Solvent_Resist 100.0 1.4E-37 2.9E-42 351.4 23.5 202 874-1086 13-221 (235)
82 PRK11650 ugpC glycerol-3-phosp 100.0 1.2E-37 2.6E-42 369.3 23.7 202 874-1087 17-220 (356)
83 TIGR03265 PhnT2 putative 2-ami 100.0 1.8E-37 4E-42 367.3 23.7 214 849-1087 5-220 (353)
84 TIGR01188 drrA daunorubicin re 100.0 2.2E-37 4.8E-42 361.8 23.9 202 873-1086 5-208 (302)
85 PRK13536 nodulation factor exp 100.0 2.4E-37 5.2E-42 364.6 24.0 214 848-1086 41-256 (340)
86 PRK11432 fbpC ferric transport 100.0 2.4E-37 5.3E-42 365.6 23.6 215 848-1087 6-222 (351)
87 TIGR02314 ABC_MetN D-methionin 100.0 2.4E-37 5.2E-42 363.6 23.3 206 184-432 18-229 (343)
88 TIGR03265 PhnT2 putative 2-ami 100.0 3.8E-37 8.3E-42 364.6 24.9 205 185-432 18-223 (353)
89 COG3840 ThiQ ABC-type thiamine 100.0 1.5E-37 3.2E-42 314.4 18.1 201 189-432 17-218 (231)
90 TIGR03258 PhnT 2-aminoethylpho 100.0 3E-37 6.5E-42 365.9 23.5 215 848-1087 5-224 (362)
91 PRK11432 fbpC ferric transport 100.0 5.5E-37 1.2E-41 362.6 25.1 206 184-432 19-225 (351)
92 COG3840 ThiQ ABC-type thiamine 100.0 1.4E-37 3E-42 314.6 17.0 196 879-1086 17-214 (231)
93 cd03259 ABC_Carb_Solutes_like 100.0 5.1E-37 1.1E-41 341.5 23.0 199 874-1084 13-213 (213)
94 cd03293 ABC_NrtD_SsuB_transpor 100.0 9E-37 2E-41 341.2 24.3 200 874-1086 17-218 (220)
95 PRK13537 nodulation ABC transp 100.0 1E-36 2.2E-41 355.8 25.7 206 184-433 20-227 (306)
96 TIGR00960 3a0501s02 Type II (G 100.0 7.3E-37 1.6E-41 341.0 23.4 195 874-1080 16-216 (216)
97 PRK09452 potA putrescine/sperm 100.0 8.5E-37 1.8E-41 363.2 25.4 217 185-452 28-245 (375)
98 PRK11650 ugpC glycerol-3-phosp 100.0 4.9E-37 1.1E-41 364.1 23.2 206 184-432 17-223 (356)
99 PRK10851 sulfate/thiosulfate t 100.0 5.4E-37 1.2E-41 363.4 23.4 205 874-1087 15-222 (353)
100 COG1124 DppF ABC-type dipeptid 100.0 2.9E-37 6.2E-42 330.2 18.9 199 875-1087 21-227 (252)
101 TIGR01186 proV glycine betaine 100.0 8.5E-37 1.8E-41 360.7 24.6 204 872-1087 4-215 (363)
102 cd03265 ABC_DrrA DrrA is the A 100.0 7.9E-37 1.7E-41 341.7 22.9 202 873-1086 12-216 (220)
103 TIGR01288 nodI ATP-binding ABC 100.0 8E-37 1.7E-41 357.2 24.0 214 848-1086 4-219 (303)
104 TIGR03258 PhnT 2-aminoethylpho 100.0 1E-36 2.3E-41 361.2 25.0 205 185-432 19-227 (362)
105 KOG0058 Peptide exporter, ABC 100.0 2.9E-37 6.3E-42 372.3 20.5 216 175-433 473-691 (716)
106 cd03269 ABC_putative_ATPase Th 100.0 9.3E-37 2E-41 338.7 22.9 198 874-1084 13-210 (210)
107 TIGR01186 proV glycine betaine 100.0 1E-36 2.2E-41 360.0 24.3 207 184-433 6-219 (363)
108 PRK09452 potA putrescine/sperm 100.0 9.3E-37 2E-41 362.9 23.7 214 849-1087 15-230 (375)
109 COG1122 CbiO ABC-type cobalt t 100.0 6.8E-37 1.5E-41 339.0 20.8 214 849-1086 4-223 (235)
110 PRK11607 potG putrescine trans 100.0 2.7E-36 5.9E-41 359.6 27.2 215 848-1087 19-235 (377)
111 cd03219 ABC_Mj1267_LivG_branch 100.0 1.4E-36 3.1E-41 343.5 23.6 204 874-1086 13-227 (236)
112 cd03301 ABC_MalK_N The N-termi 100.0 1.8E-36 3.9E-41 337.1 23.3 199 874-1084 13-213 (213)
113 cd03234 ABCG_White The White s 100.0 3.7E-36 8.1E-41 337.6 25.6 205 874-1084 20-226 (226)
114 cd03266 ABC_NatA_sodium_export 100.0 1.7E-36 3.7E-41 338.6 22.7 198 875-1084 19-218 (218)
115 cd03218 ABC_YhbG The ABC trans 100.0 2E-36 4.3E-41 341.4 23.4 203 873-1087 12-218 (232)
116 TIGR03522 GldA_ABC_ATP gliding 100.0 1.6E-36 3.5E-41 354.1 23.4 201 873-1086 14-216 (301)
117 PRK11153 metN DL-methionine tr 100.0 1.9E-36 4.2E-41 358.7 24.2 218 849-1087 2-226 (343)
118 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.4E-36 5.2E-41 347.4 24.2 209 866-1086 29-245 (269)
119 cd03261 ABC_Org_Solvent_Resist 100.0 3.5E-36 7.6E-41 339.9 25.1 206 185-432 14-225 (235)
120 PRK11000 maltose/maltodextrin 100.0 1.7E-36 3.7E-41 362.0 23.7 202 874-1087 16-219 (369)
121 cd03296 ABC_CysA_sulfate_impor 100.0 2.2E-36 4.8E-41 342.3 23.5 216 849-1086 3-221 (239)
122 cd03226 ABC_cobalt_CbiO_domain 100.0 1.3E-36 2.9E-41 336.0 20.9 192 874-1081 13-205 (205)
123 PRK09536 btuD corrinoid ABC tr 100.0 1.3E-36 2.9E-41 363.3 22.5 206 873-1087 15-224 (402)
124 cd03260 ABC_PstB_phosphate_tra 100.0 2E-36 4.2E-41 340.2 22.4 204 873-1087 12-225 (227)
125 cd03268 ABC_BcrA_bacitracin_re 100.0 1.8E-36 3.9E-41 335.9 21.7 195 874-1084 13-208 (208)
126 COG0410 LivF ABC-type branched 100.0 1.9E-36 4.1E-41 321.9 20.8 206 184-433 16-226 (237)
127 COG0411 LivG ABC-type branched 100.0 1E-36 2.2E-41 326.3 18.7 212 868-1088 11-236 (250)
128 COG0410 LivF ABC-type branched 100.0 1.3E-36 2.8E-41 323.1 19.1 206 870-1088 12-223 (237)
129 PRK10851 sulfate/thiosulfate t 100.0 3.8E-36 8.2E-41 356.2 25.3 209 185-432 16-225 (353)
130 KOG0058 Peptide exporter, ABC 100.0 2.2E-37 4.8E-42 373.3 15.0 214 848-1086 465-686 (716)
131 cd03256 ABC_PhnC_transporter A 100.0 2.8E-36 6.2E-41 342.2 22.5 205 874-1087 14-230 (241)
132 cd03263 ABC_subfamily_A The AB 100.0 2.8E-36 6E-41 337.4 22.1 200 874-1086 15-216 (220)
133 cd03258 ABC_MetN_methionine_tr 100.0 3.7E-36 8.1E-41 339.3 23.1 200 875-1086 19-225 (233)
134 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 2.5E-36 5.4E-41 337.3 21.5 193 874-1079 17-217 (218)
135 COG1124 DppF ABC-type dipeptid 100.0 1.9E-36 4.2E-41 323.8 19.5 205 184-433 20-231 (252)
136 PRK11607 potG putrescine trans 100.0 5E-36 1.1E-40 357.4 25.2 205 185-432 33-238 (377)
137 COG2274 SunT ABC-type bacterio 100.0 7.5E-35 1.6E-39 367.1 37.0 213 846-1086 469-691 (709)
138 COG0411 LivG ABC-type branched 100.0 1.1E-36 2.4E-41 326.1 17.1 221 182-433 15-239 (250)
139 PRK13536 nodulation factor exp 100.0 5.4E-36 1.2E-40 353.0 24.5 206 184-433 54-261 (340)
140 COG1122 CbiO ABC-type cobalt t 100.0 2.4E-36 5.2E-41 334.6 20.1 207 184-433 17-228 (235)
141 COG2274 SunT ABC-type bacterio 100.0 2.3E-36 4.9E-41 380.8 22.6 207 185-433 487-696 (709)
142 TIGR01188 drrA daunorubicin re 100.0 3.9E-36 8.4E-41 351.3 22.7 206 184-433 6-213 (302)
143 PRK11000 maltose/maltodextrin 100.0 7.4E-36 1.6E-40 356.5 25.5 205 185-432 17-222 (369)
144 COG4559 ABC-type hemin transpo 100.0 3.7E-36 8E-41 311.8 19.7 217 849-1088 2-227 (259)
145 COG1137 YhbG ABC-type (unclass 100.0 5.2E-37 1.1E-41 315.4 13.3 209 183-433 16-228 (243)
146 PRK09493 glnQ glutamine ABC tr 100.0 6.4E-36 1.4E-40 338.9 23.5 202 874-1086 14-220 (240)
147 PRK11629 lolD lipoprotein tran 100.0 8.6E-36 1.9E-40 336.2 24.4 216 849-1086 6-229 (233)
148 PRK11264 putative amino-acid A 100.0 6.9E-36 1.5E-40 340.8 23.8 214 849-1086 4-228 (250)
149 TIGR02315 ABC_phnC phosphonate 100.0 3.4E-36 7.5E-41 341.9 20.9 205 874-1087 15-231 (243)
150 cd03295 ABC_OpuCA_Osmoprotecti 100.0 7.4E-36 1.6E-40 338.7 23.2 201 874-1086 14-220 (242)
151 PRK11248 tauB taurine transpor 100.0 9.3E-36 2E-40 339.6 24.0 200 874-1086 14-215 (255)
152 COG2884 FtsE Predicted ATPase 100.0 4.4E-36 9.6E-41 306.7 19.0 200 184-427 15-220 (223)
153 PRK13637 cbiO cobalt transport 100.0 8.2E-36 1.8E-40 345.8 23.7 218 849-1086 3-229 (287)
154 cd03224 ABC_TM1139_LivF_branch 100.0 6.4E-36 1.4E-40 335.0 22.0 199 874-1086 13-216 (222)
155 TIGR02673 FtsE cell division A 100.0 6.8E-36 1.5E-40 332.8 21.6 192 874-1076 15-212 (214)
156 COG4152 ABC-type uncharacteriz 100.0 3.4E-36 7.5E-41 318.0 18.1 208 867-1087 8-215 (300)
157 PRK11153 metN DL-methionine tr 100.0 8.9E-36 1.9E-40 353.1 23.8 206 184-432 18-229 (343)
158 cd03235 ABC_Metallic_Cations A 100.0 6.5E-36 1.4E-40 332.6 21.2 199 874-1084 12-213 (213)
159 PRK13647 cbiO cobalt transport 100.0 1.4E-35 3E-40 341.9 24.6 214 849-1086 5-222 (274)
160 PRK13634 cbiO cobalt transport 100.0 1.3E-35 2.9E-40 344.6 24.6 218 849-1086 3-230 (290)
161 PRK11831 putative ABC transpor 100.0 1.2E-35 2.6E-40 341.8 23.9 216 848-1087 7-229 (269)
162 cd03292 ABC_FtsE_transporter F 100.0 8.2E-36 1.8E-40 332.2 21.7 194 874-1079 14-213 (214)
163 cd03264 ABC_drug_resistance_li 100.0 8.6E-36 1.9E-40 331.2 21.8 197 874-1084 13-211 (211)
164 PRK13651 cobalt transporter AT 100.0 1.6E-35 3.4E-40 345.1 24.8 219 849-1087 3-250 (305)
165 cd03259 ABC_Carb_Solutes_like 100.0 1.3E-35 2.8E-40 330.2 23.1 200 184-426 13-213 (213)
166 PRK10895 lipopolysaccharide AB 100.0 1E-35 2.2E-40 337.5 22.1 203 874-1087 16-222 (241)
167 PRK13643 cbiO cobalt transport 100.0 2E-35 4.3E-40 342.8 24.8 218 849-1087 2-229 (288)
168 cd03262 ABC_HisP_GlnQ_permease 100.0 1E-35 2.2E-40 331.1 21.3 195 874-1079 13-212 (213)
169 cd03257 ABC_NikE_OppD_transpor 100.0 1.5E-35 3.4E-40 333.3 23.0 200 875-1084 19-228 (228)
170 PRK13631 cbiO cobalt transport 100.0 2.1E-35 4.6E-40 345.9 24.9 219 848-1087 21-261 (320)
171 cd03296 ABC_CysA_sulfate_impor 100.0 2.8E-35 6.1E-40 333.3 25.0 209 185-432 16-225 (239)
172 cd03265 ABC_DrrA DrrA is the A 100.0 1.9E-35 4.1E-40 330.5 23.3 205 184-431 13-219 (220)
173 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.9E-35 4.1E-40 334.1 23.4 200 874-1086 14-216 (236)
174 PRK15079 oligopeptide ABC tran 100.0 4.2E-35 9.2E-40 344.6 27.1 204 874-1087 34-247 (331)
175 PRK10908 cell division protein 100.0 2E-35 4.3E-40 330.9 22.9 196 874-1081 15-216 (222)
176 cd03225 ABC_cobalt_CbiO_domain 100.0 1.4E-35 3E-40 329.6 21.5 192 874-1076 14-209 (211)
177 TIGR03740 galliderm_ABC gallid 100.0 2.6E-35 5.6E-40 330.2 23.7 198 874-1088 13-210 (223)
178 TIGR00972 3a0107s01c2 phosphat 100.0 2.5E-35 5.4E-40 335.4 23.6 202 874-1086 14-227 (247)
179 PRK13650 cbiO cobalt transport 100.0 2.4E-35 5.3E-40 340.7 23.8 216 849-1087 5-225 (279)
180 PRK13646 cbiO cobalt transport 100.0 3E-35 6.5E-40 341.2 24.5 217 849-1086 3-230 (286)
181 PRK10619 histidine/lysine/argi 100.0 3.2E-35 6.8E-40 336.5 24.1 214 849-1086 6-236 (257)
182 KOG0057 Mitochondrial Fe/S clu 100.0 1.7E-35 3.6E-40 345.0 21.9 229 129-433 343-574 (591)
183 PRK10070 glycine betaine trans 100.0 4.3E-35 9.2E-40 350.1 25.8 206 184-432 41-253 (400)
184 PRK13636 cbiO cobalt transport 100.0 4.6E-35 9.9E-40 339.1 25.3 216 848-1087 5-227 (283)
185 cd03301 ABC_MalK_N The N-termi 100.0 3.8E-35 8.2E-40 326.6 23.7 199 185-426 14-213 (213)
186 PRK11247 ssuB aliphatic sulfon 100.0 2.1E-35 4.5E-40 336.3 22.0 206 848-1086 12-218 (257)
187 PRK11300 livG leucine/isoleuci 100.0 2.4E-35 5.2E-40 337.4 22.7 217 849-1087 6-239 (255)
188 TIGR02211 LolD_lipo_ex lipopro 100.0 2.7E-35 5.9E-40 329.6 22.6 195 874-1081 18-220 (221)
189 KOG0062 ATPase component of AB 100.0 5.2E-35 1.1E-39 337.4 25.2 181 875-1082 378-559 (582)
190 cd03258 ABC_MetN_methionine_tr 100.0 3E-35 6.5E-40 332.0 22.7 205 185-432 19-229 (233)
191 TIGR01978 sufC FeS assembly AT 100.0 3.6E-35 7.8E-40 333.6 23.3 207 874-1086 13-229 (243)
192 PRK14268 phosphate ABC transpo 100.0 7.1E-35 1.5E-39 333.7 25.8 214 848-1086 12-237 (258)
193 PRK13641 cbiO cobalt transport 100.0 3.5E-35 7.7E-40 340.7 23.4 202 874-1087 20-230 (287)
194 TIGR01288 nodI ATP-binding ABC 100.0 5.2E-35 1.1E-39 342.0 25.0 205 185-433 18-224 (303)
195 PRK11124 artP arginine transpo 100.0 3.8E-35 8.3E-40 333.0 23.1 201 874-1086 15-225 (242)
196 COG4559 ABC-type hemin transpo 100.0 2.1E-35 4.7E-40 306.1 18.9 206 185-432 15-229 (259)
197 COG4175 ProV ABC-type proline/ 100.0 1.2E-35 2.5E-40 324.5 17.8 222 183-455 40-268 (386)
198 PRK14273 phosphate ABC transpo 100.0 8.1E-35 1.8E-39 332.6 25.7 215 848-1086 7-233 (254)
199 PRK11174 cysteine/glutathione 100.0 2.6E-35 5.7E-40 376.5 24.2 206 185-433 364-572 (588)
200 TIGR03005 ectoine_ehuA ectoine 100.0 4.6E-35 9.9E-40 334.3 23.6 202 874-1086 13-231 (252)
201 cd03294 ABC_Pro_Gly_Bertaine T 100.0 4.9E-35 1.1E-39 336.6 24.0 207 183-432 36-249 (269)
202 PRK14247 phosphate ABC transpo 100.0 4.8E-35 1E-39 333.8 23.7 204 874-1086 16-229 (250)
203 COG4988 CydD ABC-type transpor 100.0 3.5E-35 7.5E-40 348.9 23.3 206 185-433 335-543 (559)
204 COG4988 CydD ABC-type transpor 100.0 4.8E-34 1E-38 339.2 32.8 214 845-1087 317-539 (559)
205 PRK13634 cbiO cobalt transport 100.0 8E-35 1.7E-39 338.1 25.7 206 184-432 20-234 (290)
206 PRK10070 glycine betaine trans 100.0 4.4E-35 9.6E-40 350.0 24.1 204 872-1087 39-250 (400)
207 PRK11614 livF leucine/isoleuci 100.0 3.3E-35 7.2E-40 332.4 21.9 213 848-1087 5-222 (237)
208 COG4525 TauB ABC-type taurine 100.0 2.7E-35 5.9E-40 300.7 18.9 200 874-1086 18-219 (259)
209 PRK13643 cbiO cobalt transport 100.0 8.4E-35 1.8E-39 337.6 25.7 222 185-450 20-253 (288)
210 cd03218 ABC_YhbG The ABC trans 100.0 5.8E-35 1.2E-39 329.5 23.7 204 185-432 14-221 (232)
211 PRK13637 cbiO cobalt transport 100.0 6.3E-35 1.4E-39 338.4 24.6 217 184-443 20-247 (287)
212 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.1E-35 1.1E-39 327.0 22.7 200 184-428 17-218 (220)
213 PRK09984 phosphonate/organopho 100.0 4.3E-35 9.3E-40 336.4 22.6 220 849-1088 5-239 (262)
214 TIGR03415 ABC_choXWV_ATP choli 100.0 6.5E-35 1.4E-39 346.1 24.7 208 182-432 35-253 (382)
215 PRK13652 cbiO cobalt transport 100.0 9E-35 1.9E-39 335.9 25.2 201 875-1087 18-223 (277)
216 PRK13548 hmuV hemin importer A 100.0 5E-35 1.1E-39 334.6 22.8 202 874-1087 15-226 (258)
217 TIGR03411 urea_trans_UrtD urea 100.0 6.2E-35 1.3E-39 331.3 23.3 204 874-1087 15-227 (242)
218 PRK13644 cbiO cobalt transport 100.0 4.6E-35 1E-39 337.5 22.5 201 874-1087 15-220 (274)
219 PRK14267 phosphate ABC transpo 100.0 6.5E-35 1.4E-39 333.3 23.6 216 849-1086 5-232 (253)
220 cd03219 ABC_Mj1267_LivG_branch 100.0 7E-35 1.5E-39 329.7 23.4 214 185-432 14-231 (236)
221 PRK13635 cbiO cobalt transport 100.0 7.1E-35 1.5E-39 336.6 23.9 215 849-1087 6-225 (279)
222 TIGR03522 GldA_ABC_ATP gliding 100.0 8.1E-35 1.8E-39 339.8 24.4 205 184-433 15-221 (301)
223 cd03233 ABC_PDR_domain1 The pl 100.0 1.1E-34 2.4E-39 319.4 23.9 196 848-1084 3-202 (202)
224 cd03298 ABC_ThiQ_thiamine_tran 100.0 5.1E-35 1.1E-39 324.9 21.4 194 879-1084 16-211 (211)
225 COG4181 Predicted ABC-type tra 100.0 3.3E-35 7.1E-40 294.1 17.7 199 871-1082 20-226 (228)
226 PRK14241 phosphate transporter 100.0 8.3E-35 1.8E-39 333.2 23.7 216 849-1086 5-237 (258)
227 TIGR01184 ntrCD nitrate transp 100.0 7.2E-35 1.6E-39 327.7 22.7 198 877-1086 1-199 (230)
228 PRK13638 cbiO cobalt transport 100.0 6.7E-35 1.4E-39 336.2 23.0 201 874-1086 14-220 (271)
229 TIGR00960 3a0501s02 Type II (G 100.0 6.1E-35 1.3E-39 325.6 21.9 194 185-422 17-216 (216)
230 TIGR03415 ABC_choXWV_ATP choli 100.0 8.3E-35 1.8E-39 345.1 24.3 205 871-1087 34-250 (382)
231 PRK13650 cbiO cobalt transport 100.0 1.1E-34 2.3E-39 335.4 24.6 204 185-432 21-228 (279)
232 PRK11231 fecE iron-dicitrate t 100.0 5.3E-35 1.2E-39 334.2 21.7 206 873-1087 14-223 (255)
233 PRK11831 putative ABC transpor 100.0 1.5E-34 3.3E-39 332.7 25.6 206 185-432 21-232 (269)
234 PRK10253 iron-enterobactin tra 100.0 9.2E-35 2E-39 333.9 23.6 218 848-1087 7-229 (265)
235 cd03267 ABC_NatA_like Similar 100.0 1.2E-34 2.6E-39 327.2 24.2 202 871-1084 31-236 (236)
236 PRK10575 iron-hydroxamate tran 100.0 5.9E-35 1.3E-39 335.5 21.9 218 848-1087 11-233 (265)
237 PRK11629 lolD lipoprotein tran 100.0 7.9E-35 1.7E-39 328.4 22.3 201 184-428 22-229 (233)
238 cd03269 ABC_putative_ATPase Th 100.0 9.4E-35 2E-39 322.6 22.5 197 185-426 14-210 (210)
239 TIGR03410 urea_trans_UrtE urea 100.0 8.3E-35 1.8E-39 327.7 22.3 201 873-1088 12-218 (230)
240 PRK00635 excinuclease ABC subu 100.0 3.4E-33 7.4E-38 372.8 41.3 135 945-1087 759-902 (1809)
241 PRK10744 pstB phosphate transp 100.0 1.8E-34 4E-39 330.6 25.3 216 847-1086 12-239 (260)
242 PRK13647 cbiO cobalt transport 100.0 2.1E-34 4.5E-39 332.1 25.8 203 185-431 19-225 (274)
243 PRK09536 btuD corrinoid ABC tr 100.0 1.1E-34 2.4E-39 346.8 24.3 209 184-432 16-227 (402)
244 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.6E-35 1E-39 327.0 19.7 195 184-422 17-218 (218)
245 PRK13649 cbiO cobalt transport 100.0 1.2E-34 2.5E-39 336.0 23.6 200 874-1086 20-229 (280)
246 cd03232 ABC_PDR_domain2 The pl 100.0 1.5E-34 3.3E-39 315.8 23.2 190 848-1084 3-192 (192)
247 TIGR03873 F420-0_ABC_ATP propo 100.0 9E-35 1.9E-39 332.6 22.1 206 873-1087 13-222 (256)
248 PRK10584 putative ABC transpor 100.0 1.7E-34 3.7E-39 324.7 23.8 213 848-1082 6-226 (228)
249 TIGR03608 L_ocin_972_ABC putat 100.0 1E-34 2.2E-39 321.4 21.5 190 873-1074 10-206 (206)
250 cd03224 ABC_TM1139_LivF_branch 100.0 1.3E-34 2.7E-39 324.5 22.5 202 185-432 14-220 (222)
251 cd03234 ABCG_White The White s 100.0 1.5E-34 3.3E-39 324.5 23.1 203 184-426 20-226 (226)
252 PRK11022 dppD dipeptide transp 100.0 3.1E-34 6.8E-39 337.2 26.7 221 849-1087 4-239 (326)
253 PRK13639 cbiO cobalt transport 100.0 2.2E-34 4.7E-39 332.3 24.9 202 874-1087 15-222 (275)
254 PRK14242 phosphate transporter 100.0 2.9E-34 6.3E-39 328.0 25.7 219 848-1086 6-232 (253)
255 COG1245 Predicted ATPase, RNas 100.0 1.4E-33 3E-38 319.9 30.7 170 880-1075 360-530 (591)
256 cd03268 ABC_BcrA_bacitracin_re 100.0 1.4E-34 2.9E-39 320.8 22.2 195 184-426 13-208 (208)
257 PRK13549 xylose transporter AT 100.0 9.2E-35 2E-39 364.0 23.5 221 849-1089 6-230 (506)
258 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.6E-34 3.4E-39 327.9 23.1 206 184-432 14-224 (242)
259 cd03256 ABC_PhnC_transporter A 100.0 1.4E-34 3E-39 328.4 22.7 214 184-432 14-233 (241)
260 PRK14269 phosphate ABC transpo 100.0 1.5E-34 3.3E-39 328.7 23.0 203 874-1086 15-225 (246)
261 PRK13632 cbiO cobalt transport 100.0 2.3E-34 5E-39 331.6 24.8 216 848-1087 7-227 (271)
262 TIGR02769 nickel_nikE nickel i 100.0 1.7E-34 3.7E-39 331.7 23.5 203 874-1087 24-236 (265)
263 PRK13646 cbiO cobalt transport 100.0 2.3E-34 5.1E-39 333.7 24.9 205 184-432 20-234 (286)
264 TIGR01277 thiQ thiamine ABC tr 100.0 2.5E-34 5.5E-39 319.7 24.0 198 876-1085 13-212 (213)
265 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.9E-34 6.3E-39 324.4 24.8 206 184-433 14-221 (236)
266 cd03297 ABC_ModC_molybdenum_tr 100.0 1.9E-34 4.2E-39 321.0 22.9 196 872-1084 11-214 (214)
267 PRK14245 phosphate ABC transpo 100.0 1.9E-34 4.2E-39 328.8 23.4 215 848-1086 3-229 (250)
268 COG4525 TauB ABC-type taurine 100.0 1.5E-34 3.3E-39 295.3 20.0 206 184-434 18-225 (259)
269 PRK13635 cbiO cobalt transport 100.0 2.8E-34 6.1E-39 331.6 25.0 204 185-432 21-228 (279)
270 cd03263 ABC_subfamily_A The AB 100.0 1.2E-34 2.6E-39 324.2 21.2 203 184-431 15-219 (220)
271 PRK13648 cbiO cobalt transport 100.0 3E-34 6.4E-39 330.4 25.1 216 848-1087 7-227 (269)
272 PRK14256 phosphate ABC transpo 100.0 2.6E-34 5.7E-39 328.1 24.4 215 849-1086 5-231 (252)
273 PRK09493 glnQ glutamine ABC tr 100.0 3.4E-34 7.5E-39 324.7 25.1 204 185-432 15-224 (240)
274 TIGR02142 modC_ABC molybdenum 100.0 1.6E-34 3.4E-39 344.2 23.4 194 879-1086 15-216 (354)
275 cd03300 ABC_PotA_N PotA is an 100.0 2.5E-34 5.4E-39 324.0 23.8 201 874-1086 13-215 (232)
276 TIGR00968 3a0106s01 sulfate AB 100.0 2.2E-34 4.7E-39 325.4 23.3 201 874-1086 13-215 (237)
277 KOG0057 Mitochondrial Fe/S clu 100.0 2.1E-35 4.6E-40 344.2 15.3 209 848-1086 351-569 (591)
278 PRK11308 dppF dipeptide transp 100.0 2.3E-34 4.9E-39 338.3 23.9 225 849-1087 6-240 (327)
279 PRK13633 cobalt transporter AT 100.0 2.8E-34 6E-39 332.3 24.3 219 849-1087 5-229 (280)
280 PRK14235 phosphate transporter 100.0 2.4E-34 5.2E-39 330.7 23.5 216 848-1086 19-246 (267)
281 PRK13640 cbiO cobalt transport 100.0 2.9E-34 6.3E-39 332.3 24.3 217 848-1086 5-227 (282)
282 PRK13651 cobalt transporter AT 100.0 2.7E-34 5.9E-39 334.6 24.1 204 185-432 21-253 (305)
283 PRK13547 hmuV hemin importer A 100.0 1.6E-34 3.4E-39 331.7 21.7 208 873-1087 13-240 (272)
284 PRK09473 oppD oligopeptide tra 100.0 4.7E-34 1E-38 336.0 26.2 225 848-1087 12-247 (330)
285 cd03260 ABC_PstB_phosphate_tra 100.0 1.5E-34 3.2E-39 325.0 21.0 203 185-430 14-226 (227)
286 PRK10771 thiQ thiamine transpo 100.0 1.9E-34 4E-39 325.1 21.6 197 879-1087 17-215 (232)
287 PRK13631 cbiO cobalt transport 100.0 4.3E-34 9.3E-39 334.9 25.4 216 184-444 39-279 (320)
288 PRK14259 phosphate ABC transpo 100.0 3.3E-34 7.2E-39 329.7 24.0 214 848-1086 13-248 (269)
289 cd03267 ABC_NatA_like Similar 100.0 2.8E-34 6.1E-39 324.2 22.9 201 183-426 33-236 (236)
290 PRK14237 phosphate transporter 100.0 6E-34 1.3E-38 327.4 26.0 221 846-1086 18-246 (267)
291 PRK13645 cbiO cobalt transport 100.0 2.3E-34 5.1E-39 334.6 22.7 219 848-1086 6-235 (289)
292 PRK11144 modC molybdate transp 100.0 2.3E-34 5E-39 342.2 23.1 191 879-1087 16-214 (352)
293 PRK00349 uvrA excinuclease ABC 100.0 6.3E-33 1.4E-37 358.3 38.2 123 948-1086 791-922 (943)
294 KOG0055 Multidrug/pheromone ex 100.0 3.7E-35 8E-40 372.7 17.2 219 842-1087 344-572 (1228)
295 PRK15093 antimicrobial peptide 100.0 5.7E-34 1.2E-38 336.2 26.1 223 849-1087 4-244 (330)
296 PRK14250 phosphate ABC transpo 100.0 1.8E-34 3.9E-39 326.9 21.0 208 849-1086 4-216 (241)
297 TIGR02315 ABC_phnC phosphonate 100.0 2E-34 4.3E-39 327.4 21.4 213 184-431 15-233 (243)
298 cd03299 ABC_ModC_like Archeal 100.0 4.1E-34 8.8E-39 322.8 23.7 199 876-1086 14-214 (235)
299 cd03257 ABC_NikE_OppD_transpor 100.0 3.1E-34 6.8E-39 322.7 22.5 201 185-426 19-228 (228)
300 PRK11264 putative amino-acid A 100.0 5.9E-34 1.3E-38 324.9 25.1 205 185-432 17-232 (250)
301 PRK11248 tauB taurine transpor 100.0 5.5E-34 1.2E-38 325.1 24.7 200 185-429 15-216 (255)
302 PRK13632 cbiO cobalt transport 100.0 4.6E-34 9.9E-39 329.1 24.3 205 184-432 22-230 (271)
303 PRK15112 antimicrobial peptide 100.0 2.9E-34 6.4E-39 330.0 22.6 223 849-1086 5-234 (267)
304 PRK11247 ssuB aliphatic sulfon 100.0 3.8E-34 8.1E-39 325.9 23.2 194 185-429 26-219 (257)
305 PRK15079 oligopeptide ABC tran 100.0 4.1E-34 8.8E-39 336.3 24.2 208 184-432 34-250 (331)
306 cd03266 ABC_NatA_sodium_export 100.0 1.9E-34 4.1E-39 322.1 20.4 198 185-426 19-218 (218)
307 cd03226 ABC_cobalt_CbiO_domain 100.0 2.1E-34 4.5E-39 318.6 20.3 192 184-423 13-205 (205)
308 PRK14244 phosphate ABC transpo 100.0 3.9E-34 8.4E-39 326.5 23.2 207 874-1086 18-232 (251)
309 TIGR03410 urea_trans_UrtE urea 100.0 4E-34 8.7E-39 322.1 23.0 201 185-431 14-219 (230)
310 TIGR02770 nickel_nikD nickel i 100.0 4.4E-34 9.4E-39 321.6 23.2 201 876-1086 1-210 (230)
311 PRK11174 cysteine/glutathione 100.0 1.3E-34 2.7E-39 370.3 21.2 209 848-1086 349-567 (588)
312 COG4175 ProV ABC-type proline/ 100.0 1E-34 2.2E-39 317.2 16.9 202 875-1088 42-251 (386)
313 PRK13636 cbiO cobalt transport 100.0 5.6E-34 1.2E-38 330.1 24.2 206 185-433 20-231 (283)
314 PRK14270 phosphate ABC transpo 100.0 5E-34 1.1E-38 325.5 23.3 215 849-1087 5-231 (251)
315 PRK14257 phosphate ABC transpo 100.0 8E-34 1.7E-38 333.5 25.7 222 848-1087 80-309 (329)
316 KOG0066 eIF2-interacting prote 100.0 6.1E-34 1.3E-38 318.1 23.2 208 847-1094 585-794 (807)
317 PRK14274 phosphate ABC transpo 100.0 4.7E-34 1E-38 327.2 23.1 215 848-1086 12-238 (259)
318 cd03264 ABC_drug_resistance_li 100.0 3.8E-34 8.2E-39 318.0 21.5 196 185-426 14-211 (211)
319 TIGR02211 LolD_lipo_ex lipopro 100.0 3E-34 6.6E-39 321.2 20.9 196 184-423 18-220 (221)
320 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 6.8E-34 1.5E-38 318.3 23.6 197 867-1084 28-224 (224)
321 PRK14239 phosphate transporter 100.0 5.7E-34 1.2E-38 325.4 23.4 214 849-1086 6-231 (252)
322 cd03213 ABCG_EPDR ABCG transpo 100.0 8E-34 1.7E-38 310.6 23.5 190 848-1084 3-194 (194)
323 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.4E-34 7.4E-39 371.9 24.3 205 184-433 466-673 (686)
324 cd03233 ABC_PDR_domain1 The pl 100.0 3.9E-34 8.5E-39 315.1 21.0 179 183-426 19-202 (202)
325 PRK14240 phosphate transporter 100.0 7E-34 1.5E-38 324.2 23.6 214 849-1086 4-229 (250)
326 PRK14260 phosphate ABC transpo 100.0 6.2E-34 1.3E-38 326.1 23.2 216 848-1086 7-238 (259)
327 PRK13642 cbiO cobalt transport 100.0 7.9E-34 1.7E-38 328.0 24.3 216 848-1086 4-224 (277)
328 PRK13548 hmuV hemin importer A 100.0 9.5E-34 2.1E-38 324.1 24.5 205 185-432 16-229 (258)
329 PRK13633 cobalt transporter AT 100.0 1E-33 2.2E-38 327.6 25.0 206 184-433 23-233 (280)
330 PRK10762 D-ribose transporter 100.0 4E-34 8.6E-39 357.9 23.2 219 849-1089 5-228 (501)
331 PRK13648 cbiO cobalt transport 100.0 1.4E-33 3.1E-38 324.8 25.9 204 185-432 23-230 (269)
332 PRK10418 nikD nickel transport 100.0 1.5E-33 3.2E-38 322.0 25.8 213 848-1086 4-225 (254)
333 TIGR03005 ectoine_ehuA ectoine 100.0 1E-33 2.2E-38 323.3 24.2 205 185-432 14-235 (252)
334 PRK14253 phosphate ABC transpo 100.0 7.8E-34 1.7E-38 323.7 23.2 215 848-1086 3-228 (249)
335 TIGR00972 3a0107s01c2 phosphat 100.0 1.4E-33 3E-38 321.2 25.0 206 185-432 15-231 (247)
336 PRK14272 phosphate ABC transpo 100.0 1E-33 2.2E-38 323.3 24.0 216 848-1086 4-231 (252)
337 PRK11144 modC molybdate transp 100.0 6.1E-34 1.3E-38 338.6 22.8 195 189-432 16-217 (352)
338 PRK11614 livF leucine/isoleuci 100.0 8.2E-34 1.8E-38 321.1 22.8 202 185-432 19-225 (237)
339 TIGR03411 urea_trans_UrtD urea 100.0 1.3E-33 2.7E-38 320.6 24.4 211 185-432 16-230 (242)
340 PRK14254 phosphate ABC transpo 100.0 2.2E-33 4.7E-38 325.1 26.7 214 848-1086 39-264 (285)
341 PRK13649 cbiO cobalt transport 100.0 1.9E-33 4.2E-38 325.7 26.3 205 184-432 20-233 (280)
342 PRK14262 phosphate ABC transpo 100.0 9.7E-34 2.1E-38 323.1 23.3 214 849-1086 4-229 (250)
343 PRK09700 D-allose transporter 100.0 4.9E-34 1.1E-38 358.0 22.8 218 849-1088 6-231 (510)
344 PRK13652 cbiO cobalt transport 100.0 1.5E-33 3.3E-38 325.7 24.8 205 185-432 18-226 (277)
345 PRK14236 phosphate transporter 100.0 2.2E-33 4.7E-38 323.7 26.1 215 848-1086 25-251 (272)
346 TIGR02673 FtsE cell division A 100.0 9.1E-34 2E-38 315.7 22.1 194 184-421 15-214 (214)
347 PRK14250 phosphate ABC transpo 100.0 1.3E-33 2.8E-38 319.9 23.7 200 185-432 17-220 (241)
348 cd03300 ABC_PotA_N PotA is an 100.0 1.8E-33 3.9E-38 317.0 24.8 205 185-432 14-219 (232)
349 PRK11300 livG leucine/isoleuci 100.0 1.9E-33 4.2E-38 321.6 25.4 220 185-432 19-242 (255)
350 TIGR02770 nickel_nikD nickel i 100.0 9.2E-34 2E-38 319.0 22.1 204 186-432 1-214 (230)
351 PRK11701 phnK phosphonate C-P 100.0 1.2E-33 2.6E-38 323.7 23.4 215 848-1086 6-236 (258)
352 PRK11308 dppF dipeptide transp 100.0 1.2E-33 2.6E-38 332.2 23.9 208 184-433 28-244 (327)
353 PRK14248 phosphate ABC transpo 100.0 1E-33 2.3E-38 325.9 22.8 215 848-1086 21-247 (268)
354 TIGR02982 heterocyst_DevA ABC 100.0 1.1E-33 2.5E-38 316.1 22.4 195 874-1080 18-219 (220)
355 COG4618 ArpD ABC-type protease 100.0 6.1E-34 1.3E-38 328.5 20.5 235 128-435 325-562 (580)
356 PRK09473 oppD oligopeptide tra 100.0 1.3E-33 2.8E-38 332.3 23.8 214 184-433 29-251 (330)
357 PRK15056 manganese/iron transp 100.0 1.3E-33 2.9E-38 325.4 23.4 219 848-1088 6-227 (272)
358 PRK14263 phosphate ABC transpo 100.0 1.4E-33 3E-38 322.9 23.4 206 873-1086 20-240 (261)
359 PRK11022 dppD dipeptide transp 100.0 1.5E-33 3.2E-38 331.5 24.2 210 184-432 20-242 (326)
360 PRK13538 cytochrome c biogenes 100.0 6.7E-34 1.4E-38 314.1 20.0 187 874-1074 14-202 (204)
361 TIGR01184 ntrCD nitrate transp 100.0 1.3E-33 2.7E-38 317.6 22.5 202 187-431 1-202 (230)
362 PRK13638 cbiO cobalt transport 100.0 2.7E-33 5.8E-38 322.9 25.7 204 185-432 15-224 (271)
363 PRK13543 cytochrome c biogenes 100.0 1E-33 2.2E-38 314.9 21.4 201 848-1075 11-211 (214)
364 COG0444 DppD ABC-type dipeptid 100.0 1.8E-33 4E-38 314.5 23.4 210 873-1087 17-239 (316)
365 PRK13640 cbiO cobalt transport 100.0 1.9E-33 4.2E-38 325.4 24.5 208 185-433 21-232 (282)
366 PRK10584 putative ABC transpor 100.0 1.1E-33 2.3E-38 318.3 21.7 197 185-425 24-227 (228)
367 COG4181 Predicted ABC-type tra 100.0 6.5E-34 1.4E-38 284.8 17.5 202 179-424 18-226 (228)
368 PRK14249 phosphate ABC transpo 100.0 1.7E-33 3.6E-38 321.3 23.5 214 849-1086 5-230 (251)
369 PRK14273 phosphate ABC transpo 100.0 2.7E-33 5.8E-38 320.2 25.1 206 185-432 21-237 (254)
370 PRK14275 phosphate ABC transpo 100.0 1.5E-33 3.2E-38 326.8 23.3 215 848-1086 39-265 (286)
371 PRK14261 phosphate ABC transpo 100.0 1.6E-33 3.5E-38 321.8 23.2 215 848-1086 6-232 (253)
372 cd03231 ABC_CcmA_heme_exporter 100.0 7.5E-34 1.6E-38 312.9 19.6 185 873-1074 12-198 (201)
373 PRK14251 phosphate ABC transpo 100.0 1.7E-33 3.7E-38 321.3 23.2 215 848-1086 4-230 (251)
374 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 6.3E-34 1.4E-38 371.1 22.4 206 184-433 492-700 (710)
375 PRK14258 phosphate ABC transpo 100.0 1.9E-33 4.1E-38 322.3 23.6 221 848-1086 7-240 (261)
376 TIGR02769 nickel_nikE nickel i 100.0 2E-33 4.3E-38 322.9 23.8 207 184-432 24-239 (265)
377 PRK10771 thiQ thiamine transpo 100.0 2.5E-33 5.4E-38 316.0 24.1 201 189-432 17-218 (232)
378 PRK10619 histidine/lysine/argi 100.0 2.8E-33 6.1E-38 320.4 24.8 204 185-432 19-240 (257)
379 PRK10895 lipopolysaccharide AB 100.0 1.4E-33 3E-38 320.0 22.0 206 184-432 16-225 (241)
380 TIGR02633 xylG D-xylose ABC tr 100.0 1.3E-33 2.8E-38 353.7 23.9 209 873-1088 13-227 (500)
381 TIGR02142 modC_ABC molybdenum 100.0 1.5E-33 3.3E-38 335.8 23.3 199 189-432 15-220 (354)
382 COG4987 CydC ABC-type transpor 100.0 4.7E-34 1E-38 332.9 18.5 212 848-1087 336-557 (573)
383 COG4598 HisP ABC-type histidin 100.0 3E-34 6.4E-39 288.8 14.5 212 865-1087 10-237 (256)
384 PRK13641 cbiO cobalt transport 100.0 1.2E-33 2.7E-38 327.9 21.9 205 184-432 20-233 (287)
385 PRK10419 nikE nickel transport 100.0 1.7E-33 3.6E-38 323.7 22.8 204 874-1088 25-238 (268)
386 COG1132 MdlB ABC-type multidru 100.0 1E-33 2.2E-38 360.0 23.1 208 184-433 342-552 (567)
387 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 6.9E-34 1.5E-38 369.1 21.9 208 848-1086 451-668 (686)
388 PRK14265 phosphate ABC transpo 100.0 3E-33 6.5E-38 322.5 24.8 214 848-1086 20-253 (274)
389 TIGR01166 cbiO cobalt transpor 100.0 1.2E-33 2.7E-38 308.5 20.5 179 873-1061 4-188 (190)
390 PRK10575 iron-hydroxamate tran 100.0 1.8E-33 3.8E-38 323.3 22.7 209 185-432 25-236 (265)
391 PRK14255 phosphate ABC transpo 100.0 2.5E-33 5.4E-38 320.1 23.8 214 849-1086 6-231 (252)
392 PRK10908 cell division protein 100.0 2.2E-33 4.7E-38 314.4 22.8 196 184-423 15-216 (222)
393 cd03292 ABC_FtsE_transporter F 100.0 1.1E-33 2.3E-38 315.2 20.2 195 184-422 14-214 (214)
394 PRK13644 cbiO cobalt transport 100.0 1.4E-33 3.1E-38 325.1 21.8 203 185-432 16-223 (274)
395 PRK03695 vitamin B12-transport 100.0 2.3E-33 5E-38 319.0 23.2 198 876-1087 11-218 (248)
396 PRK14271 phosphate ABC transpo 100.0 2.3E-33 5.1E-38 323.5 23.6 219 848-1086 21-246 (276)
397 TIGR03740 galliderm_ABC gallid 100.0 1.8E-33 3.9E-38 315.3 22.0 197 184-429 13-209 (223)
398 PRK10982 galactose/methyl gala 100.0 1.3E-33 2.8E-38 352.6 23.1 208 873-1089 10-221 (491)
399 TIGR01193 bacteriocin_ABC ABC- 100.0 2.6E-31 5.7E-36 346.2 45.5 210 848-1086 473-692 (708)
400 PRK11176 lipid transporter ATP 100.0 1.9E-33 4.1E-38 359.2 25.0 209 184-433 356-567 (582)
401 TIGR00968 3a0106s01 sulfate AB 100.0 3.5E-33 7.7E-38 315.6 24.2 205 185-432 14-219 (237)
402 COG4604 CeuD ABC-type enteroch 100.0 1.5E-34 3.3E-39 296.0 11.8 213 866-1088 6-222 (252)
403 PRK13645 cbiO cobalt transport 100.0 2.3E-33 5E-38 326.3 23.3 205 185-432 25-239 (289)
404 cd03299 ABC_ModC_like Archeal 100.0 2.8E-33 6E-38 316.0 23.2 204 186-432 14-218 (235)
405 TIGR03375 type_I_sec_LssB type 100.0 1.5E-33 3.2E-38 366.5 23.9 208 184-433 478-688 (694)
406 PRK14247 phosphate ABC transpo 100.0 4.8E-33 1E-37 317.4 25.1 208 185-432 17-233 (250)
407 PRK14268 phosphate ABC transpo 100.0 4.5E-33 9.8E-38 318.8 24.9 205 185-432 26-241 (258)
408 PRK15439 autoinducer 2 ABC tra 100.0 1.4E-33 3.1E-38 353.1 22.6 211 849-1088 12-226 (510)
409 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.9E-33 4.2E-38 312.3 21.2 195 189-426 16-211 (211)
410 CHL00131 ycf16 sulfate ABC tra 100.0 3.5E-33 7.6E-38 318.9 23.8 221 848-1087 7-237 (252)
411 PRK14267 phosphate ABC transpo 100.0 4.3E-33 9.4E-38 318.3 24.6 208 185-432 18-236 (253)
412 PRK14238 phosphate transporter 100.0 2.4E-33 5.1E-38 323.0 22.5 215 848-1086 24-250 (271)
413 PRK11124 artP arginine transpo 100.0 2.8E-33 6E-38 317.8 22.8 203 185-431 16-228 (242)
414 TIGR00630 uvra excinuclease AB 100.0 6.7E-32 1.5E-36 348.2 38.4 123 948-1086 789-920 (924)
415 PRK10253 iron-enterobactin tra 100.0 2.8E-33 6.2E-38 321.6 23.1 208 185-432 21-232 (265)
416 PRK10418 nikD nickel transport 100.0 7.2E-33 1.6E-37 316.4 26.3 206 185-432 17-229 (254)
417 cd03252 ABCC_Hemolysin The ABC 100.0 7.2E-34 1.6E-38 321.6 17.8 196 874-1086 15-220 (237)
418 COG1132 MdlB ABC-type multidru 100.0 5.4E-34 1.2E-38 362.5 18.7 210 848-1086 328-547 (567)
419 PRK10247 putative ABC transpor 100.0 1.4E-33 3E-38 316.3 19.9 209 848-1084 7-220 (225)
420 PRK11176 lipid transporter ATP 100.0 1.4E-33 3E-38 360.5 22.6 212 848-1086 341-562 (582)
421 PRK10790 putative multidrug tr 100.0 2.2E-33 4.9E-38 358.8 24.5 206 185-433 355-563 (592)
422 TIGR01978 sufC FeS assembly AT 100.0 4.5E-33 9.8E-38 316.4 24.3 212 185-432 14-233 (243)
423 PRK14242 phosphate transporter 100.0 5.9E-33 1.3E-37 317.2 25.3 203 185-432 20-236 (253)
424 PRK09984 phosphonate/organopho 100.0 2.8E-33 6.1E-38 321.3 22.6 215 185-431 18-240 (262)
425 PRK13546 teichoic acids export 100.0 7.3E-33 1.6E-37 316.4 25.8 194 872-1087 35-228 (264)
426 PRK13639 cbiO cobalt transport 100.0 5E-33 1.1E-37 321.0 24.6 204 185-432 16-225 (275)
427 PRK14246 phosphate ABC transpo 100.0 4.4E-33 9.6E-38 318.0 23.8 204 873-1086 22-236 (257)
428 PRK11288 araG L-arabinose tran 100.0 2.2E-33 4.8E-38 351.1 23.0 216 849-1086 5-224 (501)
429 PRK15112 antimicrobial peptide 100.0 4E-33 8.7E-38 320.5 23.1 207 184-432 26-238 (267)
430 PRK15093 antimicrobial peptide 100.0 7.4E-33 1.6E-37 326.8 25.9 214 184-432 20-247 (330)
431 COG4987 CydC ABC-type transpor 100.0 1.1E-33 2.3E-38 330.0 18.1 217 173-433 342-561 (573)
432 cd03225 ABC_cobalt_CbiO_domain 100.0 2.3E-33 5E-38 311.7 20.1 194 184-421 14-211 (211)
433 TIGR02323 CP_lyasePhnK phospho 100.0 4.2E-33 9.2E-38 318.4 22.7 202 874-1086 16-233 (253)
434 PRK10790 putative multidrug tr 100.0 2E-33 4.2E-38 359.4 22.1 209 848-1086 340-558 (592)
435 cd03262 ABC_HisP_GlnQ_permease 100.0 3.2E-33 6.9E-38 311.1 20.9 194 185-422 14-213 (213)
436 PRK11231 fecE iron-dicitrate t 100.0 3.6E-33 7.8E-38 319.2 21.9 207 185-432 16-226 (255)
437 PRK13539 cytochrome c biogenes 100.0 2.1E-33 4.4E-38 310.8 19.2 185 874-1075 15-199 (207)
438 PRK14243 phosphate transporter 100.0 3.9E-33 8.5E-38 320.1 22.2 214 848-1086 10-243 (264)
439 PRK13642 cbiO cobalt transport 100.0 9.1E-33 2E-37 319.2 25.1 204 185-432 21-228 (277)
440 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.4E-33 3E-38 367.9 20.5 209 848-1086 477-695 (710)
441 cd03235 ABC_Metallic_Cations A 100.0 2.4E-33 5.3E-38 312.0 19.4 200 184-426 12-213 (213)
442 TIGR01193 bacteriocin_ABC ABC- 100.0 2.3E-33 5.1E-38 365.4 22.4 207 185-433 488-697 (708)
443 PRK14266 phosphate ABC transpo 100.0 8.8E-33 1.9E-37 315.2 24.4 206 874-1086 16-229 (250)
444 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.6E-33 5.7E-38 321.1 20.0 210 849-1087 3-221 (275)
445 TIGR00958 3a01208 Conjugate Tr 100.0 2.5E-33 5.5E-38 363.6 22.4 206 184-433 494-702 (711)
446 TIGR01277 thiQ thiamine ABC tr 100.0 7.2E-33 1.6E-37 308.1 22.9 199 186-427 13-212 (213)
447 PRK11701 phnK phosphonate C-P 100.0 1.1E-32 2.4E-37 315.7 25.0 206 185-432 20-240 (258)
448 PRK14235 phosphate transporter 100.0 1E-32 2.2E-37 317.2 24.7 207 185-432 33-250 (267)
449 PRK11160 cysteine/glutathione 100.0 2.2E-33 4.7E-38 356.4 21.1 211 848-1086 338-557 (574)
450 COG0444 DppD ABC-type dipeptid 100.0 1.1E-32 2.4E-37 308.3 24.0 215 183-432 17-242 (316)
451 TIGR01189 ccmA heme ABC export 100.0 3.2E-33 7E-38 307.2 19.5 184 873-1073 12-197 (198)
452 PRK14274 phosphate ABC transpo 100.0 1.1E-32 2.5E-37 315.8 24.8 206 185-432 26-242 (259)
453 PRK14264 phosphate ABC transpo 100.0 6.7E-33 1.4E-37 324.1 23.3 221 848-1086 45-284 (305)
454 PRK09580 sufC cysteine desulfu 100.0 7.3E-33 1.6E-37 315.6 23.0 207 874-1086 14-230 (248)
455 cd03230 ABC_DR_subfamily_A Thi 100.0 3E-33 6.6E-38 300.5 18.8 158 874-1079 13-172 (173)
456 cd03213 ABCG_EPDR ABCG transpo 100.0 1.2E-32 2.5E-37 301.4 23.6 171 184-426 22-194 (194)
457 PRK11160 cysteine/glutathione 100.0 4.1E-33 8.9E-38 353.8 22.9 206 185-433 354-562 (574)
458 COG1129 MglA ABC-type sugar tr 100.0 5E-33 1.1E-37 330.6 22.1 222 868-1098 15-243 (500)
459 PRK14270 phosphate ABC transpo 100.0 1.6E-32 3.5E-37 313.2 25.4 206 185-432 18-234 (251)
460 COG4148 ModC ABC-type molybdat 100.0 9E-34 2E-38 304.6 14.0 196 189-433 16-218 (352)
461 TIGR03873 F420-0_ABC_ATP propo 100.0 7.4E-33 1.6E-37 316.8 22.5 207 185-432 15-225 (256)
462 PRK14257 phosphate ABC transpo 100.0 1.3E-32 2.8E-37 323.4 25.1 210 185-432 96-312 (329)
463 TIGR01846 type_I_sec_HlyB type 100.0 2.5E-31 5.4E-36 345.4 39.7 211 848-1086 455-675 (694)
464 PRK13545 tagH teichoic acids e 100.0 1E-32 2.2E-37 331.3 24.5 192 874-1087 37-228 (549)
465 PRK10744 pstB phosphate transp 100.0 1.4E-32 3E-37 315.1 24.7 206 185-432 27-243 (260)
466 COG4152 ABC-type uncharacteriz 100.0 2.6E-33 5.7E-38 296.2 17.1 209 182-435 13-221 (300)
467 TIGR00958 3a01208 Conjugate Tr 100.0 2.1E-33 4.6E-38 364.2 20.2 210 848-1086 478-697 (711)
468 PRK14241 phosphate transporter 100.0 1.3E-32 2.9E-37 315.0 24.5 207 185-432 18-241 (258)
469 cd03245 ABCC_bacteriocin_expor 100.0 3.2E-33 7E-38 312.6 18.6 195 874-1084 17-220 (220)
470 TIGR03375 type_I_sec_LssB type 100.0 3E-33 6.5E-38 363.6 21.2 211 848-1086 463-683 (694)
471 PRK14237 phosphate transporter 100.0 2.5E-32 5.4E-37 314.0 26.4 206 185-432 34-250 (267)
472 cd03251 ABCC_MsbA MsbA is an e 100.0 1.4E-33 3E-38 318.6 15.8 195 875-1086 16-220 (234)
473 TIGR01842 type_I_sec_PrtD type 100.0 1.3E-32 2.8E-37 347.9 26.2 209 184-433 331-542 (544)
474 PRK14256 phosphate ABC transpo 100.0 2.2E-32 4.9E-37 312.2 25.6 207 185-432 18-235 (252)
475 PRK14269 phosphate ABC transpo 100.0 1.7E-32 3.7E-37 311.9 24.4 207 185-432 16-229 (246)
476 PRK14239 phosphate transporter 100.0 2.5E-32 5.4E-37 311.9 25.6 206 185-432 19-235 (252)
477 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.4E-33 5.3E-38 317.5 17.1 196 874-1086 16-221 (238)
478 TIGR03771 anch_rpt_ABC anchore 100.0 1.1E-32 2.3E-37 308.6 22.0 195 882-1088 1-198 (223)
479 TIGR02982 heterocyst_DevA ABC 100.0 1.6E-32 3.4E-37 306.9 23.3 196 184-422 18-219 (220)
480 cd03254 ABCC_Glucan_exporter_l 100.0 2.8E-33 6.1E-38 315.1 17.4 196 875-1086 17-221 (229)
481 PRK14252 phosphate ABC transpo 100.0 1.3E-32 2.8E-37 316.3 23.2 215 848-1086 16-244 (265)
482 PRK13547 hmuV hemin importer A 100.0 1.3E-32 2.8E-37 316.0 23.0 212 185-432 15-243 (272)
483 PRK14245 phosphate ABC transpo 100.0 2E-32 4.2E-37 312.3 24.3 205 185-432 17-233 (250)
484 KOG0056 Heavy metal exporter H 100.0 1.9E-33 4.1E-38 318.7 15.0 208 184-433 551-761 (790)
485 cd03252 ABCC_Hemolysin The ABC 100.0 1E-32 2.2E-37 312.2 20.8 206 184-433 15-225 (237)
486 PRK14259 phosphate ABC transpo 100.0 1.5E-32 3.3E-37 315.9 22.5 205 185-433 27-253 (269)
487 cd03297 ABC_ModC_molybdenum_tr 100.0 1.6E-32 3.4E-37 305.7 21.8 192 189-426 16-214 (214)
488 COG1123 ATPase components of v 100.0 2.8E-32 6E-37 326.2 25.3 207 874-1087 22-240 (539)
489 PRK14240 phosphate transporter 100.0 3.4E-32 7.3E-37 310.4 24.8 206 185-432 17-233 (250)
490 cd03215 ABC_Carb_Monos_II This 100.0 1.2E-32 2.6E-37 298.3 20.0 160 876-1079 15-181 (182)
491 TIGR02324 CP_lyasePhnL phospho 100.0 1.5E-32 3.2E-37 308.1 21.3 191 874-1075 21-223 (224)
492 TIGR03269 met_CoM_red_A2 methy 100.0 1.5E-32 3.2E-37 345.6 23.6 204 873-1086 12-253 (520)
493 PRK14248 phosphate ABC transpo 100.0 5.1E-32 1.1E-36 311.9 26.1 203 185-432 35-251 (268)
494 PTZ00265 multidrug resistance 100.0 7E-33 1.5E-37 377.9 22.3 213 184-433 1181-1452(1466)
495 PRK13540 cytochrome c biogenes 100.0 8.5E-33 1.8E-37 304.3 18.7 182 874-1072 14-197 (200)
496 PRK14262 phosphate ABC transpo 100.0 4.1E-32 8.9E-37 309.7 24.9 206 185-432 17-233 (250)
497 cd03229 ABC_Class3 This class 100.0 7.7E-33 1.7E-37 298.8 17.8 158 874-1076 13-176 (178)
498 COG4161 ArtP ABC-type arginine 100.0 8.6E-33 1.9E-37 273.4 16.3 205 871-1086 12-225 (242)
499 TIGR02203 MsbA_lipidA lipid A 100.0 1.1E-32 2.5E-37 351.6 22.1 209 184-433 345-556 (571)
500 PRK14272 phosphate ABC transpo 100.0 5.1E-32 1.1E-36 309.3 25.2 207 185-432 18-235 (252)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-252 Score=2329.46 Aligned_cols=1342 Identities=51% Similarity=0.873 Sum_probs=1255.3
Q ss_pred cchhhhhhHHHHhhCCchhhhhhccccccCCCCcccCCCceeecccCCChhhhhHHHHHHHhhhccchHHHHHHHHHHHh
Q 000517 48 TDVEHALLWAEIERLPTYDRLKASLFDVNSHGNLVDNQGKLVIDVTKLGALERHVFIEKLIKHIEHDNLQLLWKIRKRVD 127 (1449)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (1449)
+||||+|||||+|||||++| +++.+..++ ++|+.+++..+++.++++..+..++|+++++.++|+|+|
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~~---------~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~ 79 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFES---------EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERID 79 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhccC---------cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcC
Confidence 45999999999999999999 665432111 499999999999999999999999999999999999999
Q ss_pred hcCCCCCCceEEEeeeEEEEEeeecCCCCCCCchhhhhhhhhccccccCccccccccccccceeeEEeCCeEEEEEcCCC
Q 000517 128 KVGIKLPTIEVRYKNLCVEAKCEVVHGKPLPTLWNSFKGMISVLPKLSGYKSLEAKINILNHVSGILKPGRMTLLLGPPG 207 (1449)
Q Consensus 128 ~~g~~~p~v~v~~~~L~v~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~G 207 (1449)
++ ++|.++++++++.+++++ ..| ||++|...+.++......+.. ++.+..||+|+||.++||+|++++||||
T Consensus 80 ~~--~~p~~~~~~~~~gv~a~~-~~~----~t~~n~~~~~~~~~~~~~~~~-~~~~~~il~~~sg~~~pg~m~lvLG~pg 151 (1391)
T KOG0065|consen 80 RV--ELPTIEVRFSALGVEADV-TYG----PTLVNILSNPLESILRMLGKR-KKKKIQILKDISGIIKPGEMTLVLGPPG 151 (1391)
T ss_pred cc--cCCceEEEeeeccccccc-ccc----hhhhhhhhhHHHHHhhhcccc-ccccceeecCcceeEcCCceEEEecCCC
Confidence 98 899999999999999999 444 999999999888766555433 4456789999999999999999999999
Q ss_pred CcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCCCHHHHHHHHHHccCCCCchhhhhHhcH
Q 000517 208 CGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTVRETVDFSARCQGVGSREETMMEVSR 287 (1449)
Q Consensus 208 sGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~ 287 (1449)
|||||||++|+|.++...+..|+|+|||++.+++.+++.++|++|+|.|+|+|||||||+|+++|++++.+++ +++|
T Consensus 152 sG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R 228 (1391)
T KOG0065|consen 152 SGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSR 228 (1391)
T ss_pred CchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccH
Confidence 9999999999999998777789999999999999999999999999999999999999999999999998876 6667
Q ss_pred HHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCChhhhhhHHHHHHHhCCCcEEEEe
Q 000517 288 REKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMD 367 (1449)
Q Consensus 288 ~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLD 367 (1449)
+|+++ ..+|++++++||++|+||+|||++.||+||||||||+||+++++++++++||
T Consensus 229 ~e~~~-----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 229 REKLA-----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred HHHHH-----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 76642 2579999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCC
Q 000517 368 EITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVYHGPQDHVLAFFEDCGFRCPERKG 447 (1449)
Q Consensus 368 EPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~ 447 (1449)
|+|+||||+|+.+|+++||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||++++
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~ 365 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKG 365 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhHhHHHHhcCcccCCCCCCCccccCcccccHHHHHHHH
Q 000517 448 VSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDEELLVPYDKSKSPKNAISFSVYSLSRWELFKAC 527 (1449)
Q Consensus 448 ~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l 527 (1449)
+|||++++++++++.++|..++.|+.+.++.++++.|.+++.++++..+++.++++.+.++.+...++|.+++|+|+++|
T Consensus 366 ~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c 445 (1391)
T KOG0065|consen 366 TADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKAC 445 (1391)
T ss_pred HHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhhhHHHHHHHHHHHHhhHHHHHHHHhhhhhHHHh
Q 000517 528 MSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYYMGSLYFSLVVLLVDGMPELSMTIQRLEVFYKQ 607 (1449)
Q Consensus 528 ~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~ 607 (1449)
+.|++++++||.+++++++++.+++|+++|++|+++.+ .+..++..+.|++||++++.++++++++++.++++|+|+||
T Consensus 446 ~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~-~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Kh 524 (1391)
T KOG0065|consen 446 TIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM-STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKH 524 (1391)
T ss_pred HHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC-cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHh
Confidence 99999999999999999999999999999999999885 44447889999999999999999999999999999999999
Q ss_pred hcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHH
Q 000517 608 QELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQFILLFASHFTSISMFRFMASVFQTEFAAMT 687 (1449)
Q Consensus 608 r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l~l~l~~~~~~sl~~~i~a~~~~~~~a~~ 687 (1449)
|+..||++|+++++.+++++|..++++.+|.+|+||++|+.+++++||++++++++.++++.++|++++++++++..|++
T Consensus 525 r~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~ 604 (1391)
T KOG0065|consen 525 RDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANL 604 (1391)
T ss_pred hcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHHHhhcCCccccc------------CCC----Cccchh
Q 000517 688 AGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFLAPRWQKM------------LPT----NTTIGQ 751 (1449)
Q Consensus 688 ~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~------------~~~----~~~~G~ 751 (1449)
+|++.++++++++||+|++++||+||+|++|++|++|+++++++|||++.+|.|. ... ..+.|.
T Consensus 605 ~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~ 684 (1391)
T KOG0065|consen 605 IGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGN 684 (1391)
T ss_pred HhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCc
Confidence 9999999999999999999999999999999999999999999999999999997 111 346799
Q ss_pred hhhccCCcc-----cccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhhhhhhcccccCCCCCCcccCCC
Q 000517 752 EILESRGLN-----FDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQESEDSSYGEPVKENSR 826 (1449)
Q Consensus 752 ~~L~~~g~~-----~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 826 (1449)
++++.+++. ....|+|+++|+++||+++|++.+++++.|+++..+.+.++..++..++..... .......+.
T Consensus 685 ~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~-- 761 (1391)
T KOG0065|consen 685 DYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKS-AGSSSEIEK-- 761 (1391)
T ss_pred eEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchh-ccccccccc--
Confidence 999999887 788899999999999999999999999999999988888876655433221110 000000000
Q ss_pred CCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhh
Q 000517 827 STPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDV 906 (1449)
Q Consensus 827 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~ 906 (1449)
....+...+++++.++.+.+++++||.|.+++|-+++.+| +++++|+|||+.++||.++||||+||||||||||+
T Consensus 762 --~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdv 836 (1391)
T KOG0065|consen 762 --LDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDV 836 (1391)
T ss_pred --cccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCCCCchHHHHHH
Confidence 0011111356788899999999999999999998887666 67889999999999999999999999999999999
Q ss_pred hcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc
Q 000517 907 LAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD 986 (1449)
Q Consensus 907 L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~ 986 (1449)
||||++.|.++|+|.+||.|.+++.++|.+|||+|+|.|.+.+||+|.|.|+|+||++.+++.+++.++|+++++.++|+
T Consensus 837 LA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~ 916 (1391)
T KOG0065|consen 837 LAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELK 916 (1391)
T ss_pred HhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCch
Confidence 99999999999999999999988999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHHHHHhhCC-CEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHH
Q 000517 987 AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANP-SIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIF 1065 (1449)
Q Consensus 987 ~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p-~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~ 1065 (1449)
+++|.+||.|| +|||++|||||+||++|++|| .||||||||||||++++..|++.+|+++++|+|||||+||||.+++
T Consensus 917 ~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~if 995 (1391)
T KOG0065|consen 917 EYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIF 995 (1391)
T ss_pred hhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHH
Confidence 99999999999 899999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred HhcCeEEEEecCcEEEEecCCCCChhHHHHHHhcCCCCCCCCCCCCCCcceeeccCchhhhhhhhHHHHHHHhcHHHHHH
Q 000517 1066 EAFDELILLKTGGRIIYCGPLGKHSSQVIEYFEGISGVPKIRNNYNPATWVIEVTSTSAEAELCVDFAQIFRESVLYENN 1145 (1449)
Q Consensus 1066 ~~~d~~~~l~~gG~~v~~G~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~ 1145 (1449)
+.||++++|++||++||+||+|++++++++||++++|++ |++..||||||||+++.+.+...+.||++.|++|++|+++
T Consensus 996 e~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~w~~S~e~k~~ 1074 (1391)
T KOG0065|consen 996 EAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEIWKNSEEYKRN 1074 (1391)
T ss_pred HHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhcccccccccCccHHHHHhccHHHHHH
Confidence 999999999999999999999999999999999998885 5555699999999999998888889999999999999999
Q ss_pred HHHHHhhCCCCCC-CCCCCCCCccCcchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhh
Q 000517 1146 RELVKQLNTPPPG-SKDLHFPTRFSRNFWGQFKSCLWKLHLSYWRSPSYNLMRIMHTATASLLFGVLFWDHGQKLDNQQD 1224 (1449)
Q Consensus 1146 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~ 1224 (1449)
+++++++++++++ +.+..++++|++|+|.|++.|+||++++|||+|+|+++|++++++.||++|++||++|+ ++||
T Consensus 1075 ~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~~g~---~~q~ 1151 (1391)
T KOG0065|consen 1075 KELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWKVGH---NVQG 1151 (1391)
T ss_pred HHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeeecCC---cHHH
Confidence 9999999999998 78888899999999999999999999999999999999999999999999999999994 6899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhHHHhhHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccc
Q 000517 1225 LFNIVGSSYLAVVFLGINNCSSVIPNVARERTVMYREGFAGMYSPWAYALAQVTVEIPYLLIQALSYVIIGYPMIGYYWS 1304 (1449)
Q Consensus 1225 ~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~m~g~~~~ 1304 (1449)
++|.+|++|+++++.+..++..++|.+..||.++|||+++||||+.||++||+++|+||.++++++|++|+|+|+||+++
T Consensus 1152 lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~~Y~~iGF~~~ 1231 (1391)
T KOG0065|consen 1152 LQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLITYYPIGFYWT 1231 (1391)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhheeeeeeccchhh
Confidence 99999999999999999999889999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhCHHHHHHHHHH
Q 000517 1305 AYKLFWNFYGMFCTMMFYNYLGMLLVSLTPNSMIASILSSVCYTLFNLFAGFLIPGPKIPKWWIWMYYMMPTSWALNAMV 1384 (1449)
Q Consensus 1305 ~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~ 1384 (1449)
+.+|+||+++++++.+|++++|||+++++||.++|+++++++++++++||||++|++.||.||+||||+||++|.++|++
T Consensus 1232 a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~lsP~ty~l~gli 1311 (1391)
T KOG0065|consen 1232 ASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLSPVTYTLEGLI 1311 (1391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCccceeecC-------CCccHHHHHHhhcC----CccCChhhhHHHHHHHHHHHHHHHHHHHHhccccCC
Q 000517 1385 TSQYGDIDKEMIVFG-------ETKKLSSFIQDYFG----FHHDRLPITAAVLIIYPLVLAFLFAFCIERLNFLRR 1449 (1449)
Q Consensus 1385 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~g----~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1449 (1449)
..++||.+..|...+ .+.|+++|+++++| |.+|.......+..+|.+++.+++.+++|+.|+|||
T Consensus 1312 ~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~~~~l~~f~~~y~~~wrn 1387 (1391)
T KOG0065|consen 1312 SSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLATTACVYCAYTVADAFLAAFNIKYLNFWRN 1387 (1391)
T ss_pred HHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcceeEEEEeeeehHHHHHHHHHHHHHHHHHh
Confidence 999999988775433 23799999999999 999999888888899999999999999999999987
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=8.8e-238 Score=2363.34 Aligned_cols=1426 Identities=55% Similarity=0.979 Sum_probs=1276.3
Q ss_pred hhcccccccCCCCCcc--cccccccC-C-C---CCcchhhhhhHHHHhhCCchhhhhhccccccCCCCcccC--CCceee
Q 000517 20 IGRSLRSSFRLPTSSY--RSSSAISS-R-K---EDTDVEHALLWAEIERLPTYDRLKASLFDVNSHGNLVDN--QGKLVI 90 (1449)
Q Consensus 20 ~~~~~~~~~~~~~~~~--~~~~~~~~-~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 90 (1449)
++|+++++.. +++| +++|++.+ + + ..|||||+|+|||+||||||+|+|++++.+..+|+..+. ..+ ++
T Consensus 8 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 84 (1470)
T PLN03140 8 MRRSISRSVS--RSSRNMEDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHK-EV 84 (1470)
T ss_pred HHHHHHHHhh--hhhhhhhhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhccccccccccccccc-cc
Confidence 3455555443 5567 78886532 2 1 367899999999999999999999999954311111001 122 59
Q ss_pred cccCCChhhhhHHHHHHHhhhccchHHHHHHHHHHHhhcCCCCCCceEEEeeeEEEEEeeecCCCCCCCchhhhhhhhhc
Q 000517 91 DVTKLGALERHVFIEKLIKHIEHDNLQLLWKIRKRVDKVGIKLPTIEVRYKNLCVEAKCEVVHGKPLPTLWNSFKGMISV 170 (1449)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~v~v~~~~L~v~~~~~~~~~~~~~t~~~~~~~~~~~ 170 (1449)
|+++|+.++++.+++++++++++|+++|++++++|+|++|+++|++||+|+||+|++++ .++++.+||++|.+.+.++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~-~~~~~~~~t~~~~~~~~~~~ 163 (1470)
T PLN03140 85 DVTKLDGNDRQKFIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADC-YIGSRALPTLPNAARNIAES 163 (1470)
T ss_pred ccccCChHHHHHHHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEe-cCCcccCCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998 78999999999999998876
Q ss_pred cccccCc-cccccccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEE
Q 000517 171 LPKLSGY-KSLEAKINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAY 249 (1449)
Q Consensus 171 ~~~~~~~-~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~y 249 (1449)
.....+. .+++.+++||+|+||.++|||+++|+||||||||||||+|+|+++|+.+++|+|+|||+++++..+++.++|
T Consensus 164 ~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~y 243 (1470)
T PLN03140 164 ALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAY 243 (1470)
T ss_pred HHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEE
Confidence 5543332 233346789999999999999999999999999999999999999877789999999999887766788999
Q ss_pred EcCCCccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc
Q 000517 250 ISQNDLHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV 329 (1449)
Q Consensus 250 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~ 329 (1449)
|+|+|.|++++||+|||.|+++|++.+.+.++..+.+++++++++.|+.++|.|||+....+.+.+..++++|+.+||++
T Consensus 244 v~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~ 323 (1470)
T PLN03140 244 ISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDI 323 (1470)
T ss_pred ecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCcc
Confidence 99999999999999999999999877665555566778888888888889999999988888888888999999999999
Q ss_pred cccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHh
Q 000517 330 CADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFD 409 (1449)
Q Consensus 330 ~~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~ 409 (1449)
|+||.||+.+.|||||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++..++|+|+++|||.+++++
T Consensus 324 ~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~ 403 (1470)
T PLN03140 324 CKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFD 403 (1470)
T ss_pred ccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999887789999999999999999
Q ss_pred hcCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChh
Q 000517 410 LFDDIILMAEGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPL 489 (1449)
Q Consensus 410 ~fD~v~lL~~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 489 (1449)
+||+|++|++|+++|+||++++.+||+++||+||+++|+|||+++++++++++++|.....|+++.++++++++|++++.
T Consensus 404 lfD~vilL~~G~ivy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~ 483 (1470)
T PLN03140 404 LFDDIILLSEGQIVYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHV 483 (1470)
T ss_pred HhheEEEeeCceEEEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHH
Confidence 99999999999999999999999999999999999999999999999998888888776778888899999999999999
Q ss_pred hHhHHHHhcCcccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccc
Q 000517 490 VKKLDEELLVPYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDV 569 (1449)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~ 569 (1449)
++.+.+++..+.+++..++.....+.|..++|+|+++|++|++++++||+..+++++++.+++|+++|++|++++++...
T Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~ 563 (1470)
T PLN03140 484 GMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRN 563 (1470)
T ss_pred HHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCc
Confidence 88888887776666555665566678999999999999999999999999999999999999999999999998765433
Q ss_pred -cchhhhhHHHHHHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCc
Q 000517 570 -FHGNYYMGSLYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYS 648 (1449)
Q Consensus 570 -~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~ 648 (1449)
.+++.+.|++||++++.++++++++++++.++|+|+|||+.+||++|+|+++++++++|+.++++++|++++|||+|+.
T Consensus 564 ~~~~~~~~g~lff~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~ 643 (1470)
T PLN03140 564 EEDGALYIGALLFSMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFA 643 (1470)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCC
Confidence 3677889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHH
Q 000517 649 PEVWRFFRQFILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIG 728 (1449)
Q Consensus 649 ~~~~~f~~~~l~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~a 728 (1449)
+++++||.+++++++.++++.++|++++++++++.+|+.+++++++++++|+||++++++||+||+|++|+||++|++++
T Consensus 644 ~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~ea 723 (1470)
T PLN03140 644 PEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNA 723 (1470)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcCCcccccC--CCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhhh
Q 000517 729 LSVNEFLAPRWQKML--PTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKL 806 (1449)
Q Consensus 729 l~~nef~~~~~~~~~--~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~ 806 (1449)
+++|||.+.+|.+.. .+..+.|+.+|+.+|+..++.|+|++++++++++++|+++++++|++.++..+.....+.+..
T Consensus 724 l~~NEf~~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~ 803 (1470)
T PLN03140 724 LAVNEMFAPRWMNKMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETA 803 (1470)
T ss_pred HHHHhccCccccCcccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccch
Confidence 999999998886432 224578999999999999899999999999999999999999999999866555444332221
Q ss_pred hhhcccc----------cCCC---CC---Cc-ccC----CCCC-CCCCcccccCCccccCCCcEEEEecceeeeecccch
Q 000517 807 AKMQESE----------DSSY---GE---PV-KEN----SRST-PMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEM 864 (1449)
Q Consensus 807 ~~~~~~~----------~~~~---~~---~~-~~~----~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 864 (1449)
.+..... +... .. +. ... .... .........+++.+|+.|++++|+|++|+|+.+.+.
T Consensus 804 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~ 883 (1470)
T PLN03140 804 EEMEGEEDSIPRSLSSADGNNTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEM 883 (1470)
T ss_pred hhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccc
Confidence 1100000 0000 00 00 000 0000 000011223456788999999999999999988877
Q ss_pred hccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCC
Q 000517 865 RERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDI 944 (1449)
Q Consensus 865 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~ 944 (1449)
++.+..++++++|+|||++++|||++||||||||||||||++|+|+.++|..+|+|.+||.+.....+++.+|||+|+|.
T Consensus 884 ~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~ 963 (1470)
T PLN03140 884 KEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDI 963 (1470)
T ss_pred cccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccc
Confidence 66666666778999999999999999999999999999999999998766789999999988655556778999999999
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 945 HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 945 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
+++.+||+|+|.|++.+|.+.+.+.+++.++++++++.+||.+++|+.+|.+++++|||||||||+||++|+.+|+||||
T Consensus 964 ~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~L 1043 (1470)
T PLN03140 964 HSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFM 1043 (1470)
T ss_pred cCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEE
Confidence 99999999999999988876655666677889999999999999999999888889999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCCChhHHHHHHhcCCCCC
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKHSSQVIEYFEGISGVP 1104 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~~~~~~~~~f~~~~~~~ 1104 (1449)
||||||||+.++..+++.|++++++|+|||||+|||+.++++.||++++|++||+++|+||.+++++++++||++++|.|
T Consensus 1044 DEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~ 1123 (1470)
T PLN03140 1044 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVP 1123 (1470)
T ss_pred eCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCC
Confidence 99999999999999999999999889999999999998889999999999878999999999988889999999998888
Q ss_pred CCCCCCCCCcceeeccCchhhhhhhhHHHHHHHhcHHHHHHHHHHHhhCCCCCCCCCCCCCCccCcchHHHHHHHHHHHH
Q 000517 1105 KIRNNYNPATWVIEVTSTSAEAELCVDFAQIFRESVLYENNRELVKQLNTPPPGSKDLHFPTRFSRNFWGQFKSCLWKLH 1184 (1449)
Q Consensus 1105 ~~~~~~npa~~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~ 1184 (1449)
+||+++|||||++|+++.+.+.....||++.|++|++++++++.++++..+.++.++..++++|++|+|+|+++|+||++
T Consensus 1124 ~~p~~~NPAd~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~ 1203 (1470)
T PLN03140 1124 KIKEKYNPATWMLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQW 1203 (1470)
T ss_pred CCCCCCCchhhhhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHH
Confidence 89999999999999998766655667999999999999999888888877766666666678899999999999999999
Q ss_pred HHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhHHhhHHHhhHHHHHHccC
Q 000517 1185 LSYWRSPSYNLMRIMHTATASLLFGVLFWDHGQKLDNQQDLFNIVGSSYLAVVFLGINNCSSVIPNVARERTVMYREGFA 1264 (1449)
Q Consensus 1185 ~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~ 1264 (1449)
+++||||.|+++|+++++++|+++|++||+++++..+++++++++|++|++++|+++.++++++|.+..||+||+|||++
T Consensus 1204 ~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~ 1283 (1470)
T PLN03140 1204 WTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAA 1283 (1470)
T ss_pred HHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999887778999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q 000517 1265 GMYSPWAYALAQVTVEIPYLLIQALSYVIIGYPMIGYYWSAYKLFWNFYGMFCTMMFYNYLGMLLVSLTPNSMIASILSS 1344 (1449)
Q Consensus 1265 ~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~ 1344 (1449)
|+|++++|++|++++|+|+.++++++|++|+|||+||++++.+||||+++++++.++++++|+++++++||.++|+++++
T Consensus 1284 ~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~ 1363 (1470)
T PLN03140 1284 GMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAA 1363 (1470)
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccccCCCCcchhhhhhhhhCHHHHHHHHHHHHHhCCCccceeecC--CCccHHHHHHhhcCCccCChhhh
Q 000517 1345 VCYTLFNLFAGFLIPGPKIPKWWIWMYYMMPTSWALNAMVTSQYGDIDKEMIVFG--ETKKLSSFIQDYFGFHHDRLPIT 1422 (1449)
Q Consensus 1345 ~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~ 1422 (1449)
+++++|++||||++|+++||+||+|+||+||++|+++||++|||+|.+.+|.++| ...++++|++++|||+++++|++
T Consensus 1364 ~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 1443 (1470)
T PLN03140 1364 AFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPV 1443 (1470)
T ss_pred HHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccch
Confidence 9999999999999999999999999999999999999999999999988777776 23689999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccCC
Q 000517 1423 AAVLIIYPLVLAFLFAFCIERLNFLRR 1449 (1449)
Q Consensus 1423 ~~il~~~~~~f~~~~~~~l~~~~~~~r 1449 (1449)
++++++|+++|++++++++|++|||||
T Consensus 1444 ~~il~~~~~~f~~~~~~~~~~~~~q~r 1470 (1470)
T PLN03140 1444 AAVLVGFTVFFAFIFAFCIRTLNFQTR 1470 (1470)
T ss_pred hhhHHHHHHHHHHHHHHHHHHhhcccC
Confidence 999999999999999999999999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=5.9e-186 Score=1872.02 Aligned_cols=1282 Identities=30% Similarity=0.518 Sum_probs=1062.6
Q ss_pred ccchHHHHHHHHHHHhhcCCCCC--CceEEEeeeEEEEEeeecCCCCCCCchhhhhhhhhccccccCccccccccccccc
Q 000517 112 EHDNLQLLWKIRKRVDKVGIKLP--TIEVRYKNLCVEAKCEVVHGKPLPTLWNSFKGMISVLPKLSGYKSLEAKINILNH 189 (1449)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~g~~~p--~v~v~~~~L~v~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 189 (1449)
+.|++++++.++++.++.+...| +++|+|+||+|++.. .+....||++|.+.+..........-++++.+++||+|
T Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~--~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 79 (1394)
T TIGR00956 2 EFNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYGVA--ADSDYQPTFPNALLKILTRGFRKLKKFRDTKTFDILKP 79 (1394)
T ss_pred CCCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEEEe--ccccccCchHHHHHHHHHHHHHHhcccCCCCcceeeeC
Confidence 36788888877777777776666 999999999999944 55567899999887766522211111223345779999
Q ss_pred eeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CeeeEEEECCccCCCCC--CCceEEEEcCCCccCCCCCHHHHH
Q 000517 190 VSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSL-KVTGEVSYNGYKLEEFV--PPKTSAYISQNDLHIAEMTVRETV 266 (1449)
Q Consensus 190 vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~-~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l 266 (1449)
||+.++|||+++|+||||||||||||+|+|+.++.. ..+|+|.+||+++++.. .++.++||+|+|.|++++||+|||
T Consensus 80 vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l 159 (1394)
T TIGR00956 80 MDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETL 159 (1394)
T ss_pred CEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHH
Confidence 999999999999999999999999999999974321 24999999999875432 245699999999999999999999
Q ss_pred HHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCChh
Q 000517 267 DFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGISGG 346 (1449)
Q Consensus 267 ~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlSGG 346 (1449)
.|+++++.+..... ...++++ .+...+.+++.+||++++||+||+...||||||
T Consensus 160 ~f~~~~~~~~~~~~---~~~~~~~-----------------------~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 213 (1394)
T TIGR00956 160 DFAARCKTPQNRPD---GVSREEY-----------------------AKHIADVYMATYGLSHTRNTKVGNDFVRGVSGG 213 (1394)
T ss_pred HHHHHhCCCCCCCC---CCCHHHH-----------------------HHHHHHHHHHHcCcccccCceeCCCcCCCCCcc
Confidence 99988764321100 0111111 011246689999999999999999999999999
Q ss_pred hhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEEec
Q 000517 347 QKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVYHG 426 (1449)
Q Consensus 347 qrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~~G 426 (1449)
|||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..++|+|+++|||+++++++||+|++|++|+++|+|
T Consensus 214 erkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G 293 (1394)
T TIGR00956 214 ERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFG 293 (1394)
T ss_pred cchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEEC
Confidence 99999999999999999999999999999999999999999987668999999999999999999999999999999999
Q ss_pred ChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhHhHHHHhcCcccCC--
Q 000517 427 PQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDEELLVPYDKS-- 504 (1449)
Q Consensus 427 ~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~-- 504 (1449)
+++++.+||+++||+||++.|+|||+++++++.++ +++...+. ....+++++++.|++++.++++.++++.+.++.
T Consensus 294 ~~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~e~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 371 (1394)
T TIGR00956 294 PADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGYEK-KVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSE 371 (1394)
T ss_pred CHHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccccc-cCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccc
Confidence 99999999999999999999999999999987543 22222111 123578899999999987776666554322110
Q ss_pred -------------CCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccc
Q 000517 505 -------------KSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFH 571 (1449)
Q Consensus 505 -------------~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~ 571 (1449)
...+.....+.|..++|+|++.|++|+++.++||+..+..++++.+++|+++|++|++.+ .+..+
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~--~~~~~ 449 (1394)
T TIGR00956 372 SDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLP--KNTSD 449 (1394)
T ss_pred hhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCC--CCchh
Confidence 001112234568889999999999999999999999999999999999999999999765 34446
Q ss_pred hhhhhHHHHHHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccH
Q 000517 572 GNYYMGSLYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEV 651 (1449)
Q Consensus 572 ~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~ 651 (1449)
.+.+.|++||++++.++.++.+++.++.+|++|+|||..++|++++|+++++++++|+.++.+++|++++|||+|+.+++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 77889999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHH
Q 000517 652 WRFFRQFILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSV 731 (1449)
Q Consensus 652 ~~f~~~~l~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 731 (1449)
.+|+.+++++++.++++.++++++++++++...|+.+++++++++++|+||++++++||+||+|++|+||+.|++++++.
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCcccccC--C-----------C------------CccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHH
Q 000517 732 NEFLAPRWQKML--P-----------T------------NTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTL 786 (1449)
Q Consensus 732 nef~~~~~~~~~--~-----------~------------~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~l 786 (1449)
|||.+..+.|.. | + ..+.|+++|+. ++.....|+|.+++++++++++|.+++++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999998887741 1 0 12468888885 44455678999999999999999999999
Q ss_pred HHHhccccCCCccccchhhhhh----hcccccCC---CCCCcccCC-CCCCCCCcc-cccCCccccCCCcEEEEecceee
Q 000517 787 ALTFLKSSGSSRVMISHEKLAK----MQESEDSS---YGEPVKENS-RSTPMTNKE-SYKGRMVLPFEPLTVAFQDLKYY 857 (1449)
Q Consensus 787 aL~~~~~~~~~~~~~s~~~~~~----~~~~~~~~---~~~~~~~~~-~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~ 857 (1449)
++++.++..........++... ....+.+. ..+...... ...+.+.+. ..............++|+|++|.
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~nl~~~ 768 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEKESGEDIFHWRNLTYE 768 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchhhcccccccccccccccccCCCCccccccccccccccccccCCCceEEEEeeEEE
Confidence 9999885444322221111000 00000000 000000000 000000000 00000000011235789999987
Q ss_pred eecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC-eeEEEEEEcCccCccccccceE
Q 000517 858 VDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG-YVEGEIKISGYPKVQETFARVS 936 (1449)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~G~~~~~~~~~~~~ 936 (1449)
++.+ .+++.+|+|||++++|||++||||||||||||||++|+|+.+++ ..+|+|.+||.+.. ..+++.+
T Consensus 769 ~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~-~~~~~~i 838 (1394)
T TIGR00956 769 VKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD-SSFQRSI 838 (1394)
T ss_pred ecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC-hhhhcce
Confidence 6422 23467999999999999999999999999999999999987644 35699999999864 3467889
Q ss_pred EEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHh
Q 000517 937 GYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELV 1016 (1449)
Q Consensus 937 gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~ 1016 (1449)
|||+|+|.+++.+||+|+|.|++.+|.+.+.+.++++++++++++.++|.+++|+.+|.++. +|||||||||+||+||+
T Consensus 839 ~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl~Ia~aL~ 917 (1394)
T TIGR00956 839 GYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRLTIGVELV 917 (1394)
T ss_pred eeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHHHHHHHHH
Confidence 99999999999999999999999888765556667778899999999999999999987654 79999999999999999
Q ss_pred hCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCCChhHHHH
Q 000517 1017 ANPS-IIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKHSSQVIE 1095 (1449)
Q Consensus 1017 ~~p~-illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~~~~~~~~ 1095 (1449)
.+|+ ||||||||||||+.++..+++.|++++++|+|||+|+|||+..+++.||++++|++||+++|+|++++.++++++
T Consensus 918 ~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~~~~~~~ 997 (1394)
T TIGR00956 918 AKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGENSHTIIN 997 (1394)
T ss_pred cCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccccchHHH
Confidence 9997 999999999999999999999999998889999999999997778899999999987799999999988889999
Q ss_pred HHhcCCCCCCCCCCCCCCcceeeccCchhhhhhhhHHHHHHHhcHHHHHHHHHHHhhCCCCCCCC---CCCCCCccCcch
Q 000517 1096 YFEGISGVPKIRNNYNPATWVIEVTSTSAEAELCVDFAQIFRESVLYENNRELVKQLNTPPPGSK---DLHFPTRFSRNF 1172 (1449)
Q Consensus 1096 ~f~~~~~~~~~~~~~npa~~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 1172 (1449)
||+.+ |.++||+++|||||++|+++...+.....||.+.|++|+++++..+.++++..+..... +....++|++|+
T Consensus 998 yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 1076 (1394)
T TIGR00956 998 YFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDALSKYAASL 1076 (1394)
T ss_pred HHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccccccCCCH
Confidence 99987 66689999999999999998655444456899999999988877666655433322111 111224789999
Q ss_pred HHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhHHhhHH
Q 000517 1173 WGQFKSCLWKLHLSYWRSPSYNLMRIMHTATASLLFGVLFWDHGQKLDNQQDLFNIVGSSYLAVVFLGINNCSSVIPNVA 1252 (1449)
Q Consensus 1173 ~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~ 1252 (1449)
|+|+++|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|+++++.++. +.+++|.|.
T Consensus 1077 ~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~-~~~~~~~f~ 1152 (1394)
T TIGR00956 1077 WYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPL-IQQYLPPFV 1152 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHH-HHHhhhhHH
Confidence 999999999999999999999999999999999999999999986 4789999999999988887776 456678888
Q ss_pred HhhHHH-HHHccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccchhH-------HHHHHHHHHHHHHHHHH
Q 000517 1253 RERTVM-YREGFAGMYSPWAYALAQVTVEIPYLLIQALSYVIIGYPMIGYYWSAYK-------LFWNFYGMFCTMMFYNY 1324 (1449)
Q Consensus 1253 ~er~v~-~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~m~g~~~~~~~-------f~~~~~~~~~~~~~~~~ 1324 (1449)
.||.+| +|||++|+|++.+|++|++++|+|+.++.+++|++|+|||+||++++.. |++|+++++++.+++++
T Consensus 1153 ~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~~~~~~~s 1232 (1394)
T TIGR00956 1153 AQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTMFFLYFST 1232 (1394)
T ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHHHHHHHHH
Confidence 888886 8999999999999999999999999999999999999999999988876 99999999999999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhCHHHHHHHHHHHHHhCCCccceee-------
Q 000517 1325 LGMLLVSLTPNSMIASILSSVCYTLFNLFAGFLIPGPKIPKWWIWMYYMMPTSWALNAMVTSQYGDIDKEMIV------- 1397 (1449)
Q Consensus 1325 ~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~~------- 1397 (1449)
+|+++++++||..+|+.+++++++++++||||++|+++||+||+|+||+||++|+++|++.|||+|.+..|..
T Consensus 1233 ~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~~~e~~~f~ 1312 (1394)
T TIGR00956 1233 LGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCKVKELLTFN 1312 (1394)
T ss_pred HHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecCccccceec
Confidence 9999999999999999999999999999999999999999999999999999999999999999998754421
Q ss_pred -c-C----------------------C---C-----ccHHHHHHhhcCCccCChhhhHHHHHHHHHHHHHHHHHHHHhc
Q 000517 1398 -F-G----------------------E---T-----KKLSSFIQDYFGFHHDRLPITAAVLIIYPLVLAFLFAFCIERL 1444 (1449)
Q Consensus 1398 -~-~----------------------~---~-----~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~ 1444 (1449)
| | . + .++.+|+. .+|+++++.|+|++++++|++++ +++++++.+.
T Consensus 1313 pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~-~~~~~~~~~w~~~~i~~~~~~~~-~~~~~~l~~~ 1389 (1394)
T TIGR00956 1313 PPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLE-PISSKYSGRWRNFGIFIAFIFFN-IIATVFFYWL 1389 (1394)
T ss_pred CCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHH-HcCCcccccccchhhhhHHHHHH-HHHHHhhheE
Confidence 1 1 0 0 13445544 57999999999999999999988 8888888775
No 4
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=1.9e-94 Score=914.70 Aligned_cols=584 Identities=24% Similarity=0.427 Sum_probs=487.6
Q ss_pred CCcEEEEecceeeeeccc----------------chhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhc
Q 000517 845 EPLTVAFQDLKYYVDTPL----------------EMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLA 908 (1449)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~ 908 (1449)
.++++.|.|++|.++... ..++..+.++++.+|+|||+++++||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 367899999999986542 1122233455678999999999999999999999999999999999
Q ss_pred CCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc
Q 000517 909 GRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI 988 (1449)
Q Consensus 909 g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~ 988 (1449)
|+..++..+|+|.+||.+... ..++.+|||+|++.+++.+||+|++.|++.++.+.....++++++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~-~~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTK-QILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECch-hhccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 987654468999999987643 3345689999999999999999999999887765445555667789999999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhc
Q 000517 989 KDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAF 1068 (1449)
Q Consensus 989 ~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~ 1068 (1449)
+|+.+|+...++||||||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999987788999999999999999999999999999999999999999999999998889999999999987789999
Q ss_pred CeEEEEecCcEEEEecCCCCChhHHHHHHhcCCCCCCCCCCCCCCcceeeccCchhhh---------hhhhHHHHHHHhc
Q 000517 1069 DELILLKTGGRIIYCGPLGKHSSQVIEYFEGISGVPKIRNNYNPATWVIEVTSTSAEA---------ELCVDFAQIFRES 1139 (1449)
Q Consensus 1069 d~~~~l~~gG~~v~~G~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~v~~~~~~~---------~~~~~~~~~~~~s 1139 (1449)
|++++|+ +|+++|.|+. +++.+||+++ |. +||+++|||||++|+++...+. .......+.|+++
T Consensus 275 D~iilL~-~G~iv~~G~~----~~~~~~f~~~-G~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLS-EGRCLFFGKG----SDAMAYFESV-GF-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEec-CCcEEEECCH----HHHHHHHHHC-CC-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 9999997 5899999997 6899999998 44 5999999999999998753210 0011233445432
Q ss_pred HHHHHHHHHHHhh--CC-CCC-----CCCCCC-CCCccCcchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHH
Q 000517 1140 VLYENNRELVKQL--NT-PPP-----GSKDLH-FPTRFSRNFWGQFKSCLWKLHLSYWRSPSYNLMRIMHTATASLLFGV 1210 (1449)
Q Consensus 1140 ~~~~~~~~~~~~~--~~-~~~-----~~~~~~-~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~ 1210 (1449)
. .++..+..+.. .. +.+ ..+... ....+..+||+|+++|++|++++ |||+.++.+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111110 00 000 001000 11235678999999999999998 99999999999999999999999
Q ss_pred HhcCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhHHhhHHHhhHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 000517 1211 LFWDHGQKLDNQQDLFNIVGSSYLAVVFLGINNCSSVIPNVARERTVMYREGFAGMYSPWAYALAQVTVEIPYLLIQALS 1290 (1449)
Q Consensus 1211 ~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~ 1290 (1449)
+||+++ ..+++++.|++|++++++++.+++.+++.|+.||+||+||+++|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999984 467999999999999999988888899999999999999999999999999999999999999999999
Q ss_pred HhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhh
Q 000517 1291 YVIIGYPMIGYYWSAYKLFWNFYGMFCTMMFYNYLGMLLVSLTPNSMIASILSSVCYTLFNLFAGFLIPGPKIPKWWIWM 1370 (1449)
Q Consensus 1291 ~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~ 1370 (1449)
|++|+|||+|+++++.+||+|+++++++.++++++|+++++++||..+|+.++++++.++++||||+++ +||+||+|+
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~ 578 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWI 578 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799999999
Q ss_pred hhhCHHHHHHHHHHHHHhCCCcc-----ceeecCC-CccHHHHHHhhcCCccCChhhhHHHHHHHHHHHHHHHHHHHHhc
Q 000517 1371 YYMMPTSWALNAMVTSQYGDIDK-----EMIVFGE-TKKLSSFIQDYFGFHHDRLPITAAVLIIYPLVLAFLFAFCIERL 1444 (1449)
Q Consensus 1371 ~~isp~~y~~~~l~~~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~ 1444 (1449)
+|+||++|++++++.|||++... +|..+.. ......++. ..++++...|.++++|++|+++|++++|++|+++
T Consensus 579 ~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~~ 657 (659)
T PLN03211 579 KYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE-EDVAGQISPATSVSVLIFMFVGYRLLAYLALRRI 657 (659)
T ss_pred HHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch-hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999987542 2321110 001111222 2334455789999999999999999999999998
Q ss_pred cc
Q 000517 1445 NF 1446 (1449)
Q Consensus 1445 ~~ 1446 (1449)
||
T Consensus 658 ~~ 659 (659)
T PLN03211 658 KH 659 (659)
T ss_pred cC
Confidence 86
No 5
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.3e-94 Score=902.85 Aligned_cols=579 Identities=31% Similarity=0.564 Sum_probs=504.2
Q ss_pred CCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC-eeEEEEEEc
Q 000517 845 EPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG-YVEGEIKIS 923 (1449)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~ 923 (1449)
.++.+.|+|+++..+.+.. ..+++|+|||++++|||++|||||||||||||||+|+|+...+ ..+|+|++|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 4567899999988764421 3578999999999999999999999999999999999998764 689999999
Q ss_pred CccCccccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000517 924 GYPKVQETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLST 1003 (1449)
Q Consensus 924 G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1003 (1449)
|++...+.+++.+|||+|+|.++|++||+|+|.|+|.+|++.+.+.++++++|+++++.+||.+++|+++|.++.+|+||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98877788999999999999999999999999999999999888899999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000517 1004 EQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYC 1083 (1449)
Q Consensus 1004 GqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~ 1083 (1449)
||||||+||.+|+.||+||||||||||||+.++..+++.|+++|++|+|||||+|||+.+++++||++++|.+ |+++|+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999985 899999
Q ss_pred cCCCCChhHHHHHHhcCCCCCCCCCCCCCCcceeeccCch--hhhhh----hhHHHHHHH-hcHHHHHHHHHHHhhCCCC
Q 000517 1084 GPLGKHSSQVIEYFEGISGVPKIRNNYNPATWVIEVTSTS--AEAEL----CVDFAQIFR-ESVLYENNRELVKQLNTPP 1156 (1449)
Q Consensus 1084 G~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~v~~~~--~~~~~----~~~~~~~~~-~s~~~~~~~~~~~~~~~~~ 1156 (1449)
|++ +++.+||+++ |. +||+++|||||++|+++.. .+... .....+.++ .+...+...+..+.+....
T Consensus 253 G~~----~~~~~ff~~~-G~-~~P~~~Npadf~l~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GF-PCPELENPADFLLDLLSVDSGTRELEEAVRIAKLINKFSQTDNLKKTLEALEKSLSTSK 326 (613)
T ss_pred cCH----HHHHHHHHhC-CC-CCCCcCChHHHHHHHHccCCCchhHHhHHHHHHHhhhccccchhhhhHHHHhhhccccc
Confidence 997 6899999998 55 4999999999999998842 11100 001111111 1111111100011111111
Q ss_pred CCCCCCCCCCccCcchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHHHHHH
Q 000517 1157 PGSKDLHFPTRFSRNFWGQFKSCLWKLHLSYWRSPSYNLMRIMHTATASLLFGVLFWDHGQKLDNQQDLFNIVGSSYLAV 1236 (1449)
Q Consensus 1157 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~ 1236 (1449)
..+.....+||.|++.+++|.+++.+|||.+...|+++.+++|+++|++||+.+. +..+++++.|++|+.+
T Consensus 327 ------~~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~~ 397 (613)
T KOG0061|consen 327 ------KVEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFIL 397 (613)
T ss_pred ------ccccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHHH
Confidence 1111127899999999999999999999999999999999999999999999975 4567779999999999
Q ss_pred HHHHHHHHHhHHhhHHHhhHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccchhHHHHHHHHHH
Q 000517 1237 VFLGINNCSSVIPNVARERTVMYREGFAGMYSPWAYALAQVTVEIPYLLIQALSYVIIGYPMIGYYWSAYKLFWNFYGMF 1316 (1449)
Q Consensus 1237 ~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~ 1316 (1449)
.++.+..+...++.|+.||++|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++...|++|+++++
T Consensus 398 ~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~ 477 (613)
T KOG0061|consen 398 SFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIIL 477 (613)
T ss_pred HHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Confidence 99989888888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhCHHHHHHHHHHHHHhCCCcccee
Q 000517 1317 CTMMFYNYLGMLLVSLTPNSMIASILSSVCYTLFNLFAGFLIPGPKIPKWWIWMYYMMPTSWALNAMVTSQYGDIDKEMI 1396 (1449)
Q Consensus 1317 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~ 1396 (1449)
+..+.++++|++++++.||...|..+++++...+++|+||+++.++||.||+|++|+|+++|++||++.|||++....|.
T Consensus 478 ~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~ 557 (613)
T KOG0061|consen 478 LSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCF 557 (613)
T ss_pred HHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997333332
Q ss_pred ecC--CC-ccHHHHHHhhcCCccCChhhhHHHHHHHHHHHHHHHHHHHHhccccC
Q 000517 1397 VFG--ET-KKLSSFIQDYFGFHHDRLPITAAVLIIYPLVLAFLFAFCIERLNFLR 1448 (1449)
Q Consensus 1397 ~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~ 1448 (1449)
..+ .+ .+..+ +...++++.+..|.++.++++++++|++++|++|++....+
T Consensus 558 ~~~~~~~~~~~~~-~l~~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~ 611 (613)
T KOG0061|consen 558 LSGNLCCESTGED-VLKQLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRK 611 (613)
T ss_pred cCcCCcccccHHH-HHHhcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 111 11 34444 45668999999999999999999999999999999865443
No 6
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=7.2e-94 Score=911.72 Aligned_cols=567 Identities=30% Similarity=0.495 Sum_probs=500.6
Q ss_pred ccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC-eeEEEEEEcCccCccccccceEEEEccCCCCCCCCC
Q 000517 872 RKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG-YVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNIT 950 (1449)
Q Consensus 872 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lT 950 (1449)
+++.+|+|+|++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+|
T Consensus 36 ~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lT 115 (617)
T TIGR00955 36 PRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLT 115 (617)
T ss_pred CccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCc
Confidence 3567999999999999999999999999999999999987653 358999999998765567788999999999999999
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCC-CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000517 951 VEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPG-VNGLSTEQRKRLTIAVELVANPSIIFMDEPTT 1029 (1449)
Q Consensus 951 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~-~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTs 1029 (1449)
|+|||.|++.++.+.+...++++++++++++.+||.+++|+.+|.++ .++||||||||++||+||+.+|+++||||||+
T Consensus 116 V~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPts 195 (617)
T TIGR00955 116 VREHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTS 195 (617)
T ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCc
Confidence 99999999999887666677778889999999999999999999764 57899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCCChhHHHHHHhcCCCCCCCCCC
Q 000517 1030 GLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKHSSQVIEYFEGISGVPKIRNN 1109 (1449)
Q Consensus 1030 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~~~~~~~~~f~~~~~~~~~~~~ 1109 (1449)
|||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|.|+. +++.+||+++ |. +||++
T Consensus 196 gLD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~-g~-~~p~~ 268 (617)
T TIGR00955 196 GLDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDL-GH-PCPEN 268 (617)
T ss_pred chhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHc-CC-CCCCC
Confidence 9999999999999999998899999999999888999999999998 6899999997 6789999998 44 69999
Q ss_pred CCCCcceeeccCchhhh-----hhhhHHHHHHHhcHHHHHHHHHHHhhCCCCC---CCCCCCCCCccCcchHHHHHHHHH
Q 000517 1110 YNPATWVIEVTSTSAEA-----ELCVDFAQIFRESVLYENNRELVKQLNTPPP---GSKDLHFPTRFSRNFWGQFKSCLW 1181 (1449)
Q Consensus 1110 ~npa~~~l~v~~~~~~~-----~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Q~~~l~~ 1181 (1449)
.|||||++|+++...+. ....++.+.|++|+.+++..+..+....+.+ ........++|..+++.|++.|++
T Consensus 269 ~n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~ 348 (617)
T TIGR00955 269 YNPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLK 348 (617)
T ss_pred CChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHH
Confidence 99999999998754321 1123566778887776655443332211111 111111234678999999999999
Q ss_pred HHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhHHhhHHHhhHHHHHH
Q 000517 1182 KLHLSYWRSPSYNLMRIMHTATASLLFGVLFWDHGQKLDNQQDLFNIVGSSYLAVVFLGINNCSSVIPNVARERTVMYRE 1261 (1449)
Q Consensus 1182 R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE 1261 (1449)
|+++++||||.++.+|+++++++|+++|++||+++. ++++++++.|++|++++++++.++..+.+.++.||++|+||
T Consensus 349 R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE 425 (617)
T TIGR00955 349 RSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRE 425 (617)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999975 46789999999999999999988888899999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHH
Q 000517 1262 GFAGMYSPWAYALAQVTVEIPYLLIQALSYVIIGYPMIGYYWSAYKLFWNFYGMFCTMMFYNYLGMLLVSLTPNSMIASI 1341 (1449)
Q Consensus 1262 ~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~ 1341 (1449)
+.+|+|++.+|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|+++++++.++++++|+++++++|+..+|+.
T Consensus 426 ~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~ 505 (617)
T TIGR00955 426 TRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALT 505 (617)
T ss_pred hcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCCcchhhhhhhhhCHHHHHHHHHHHHHhCCCcc-ceeecCC---C-ccHHHHHHhhcCCcc
Q 000517 1342 LSSVCYTLFNLFAGFLIPGPKIPKWWIWMYYMMPTSWALNAMVTSQYGDIDK-EMIVFGE---T-KKLSSFIQDYFGFHH 1416 (1449)
Q Consensus 1342 ~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~-~~~~~~~---~-~~~~~~~~~~~g~~~ 1416 (1449)
++++++.++++|+||+++.++||+||+|++|+||++|++++++.|||.+... +|...+. + .+ ++++.+.||++.
T Consensus 506 ~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~-g~~~l~~~g~~~ 584 (617)
T TIGR00955 506 VGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSS-GEVILETLSFRN 584 (617)
T ss_pred HHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcC-hHHHHHhcCCCc
Confidence 9999999999999999999999999999999999999999999999998764 3421111 1 23 466778899999
Q ss_pred CChhhhHHHHHHHHHHHHHHHHHHHHhccccCC
Q 000517 1417 DRLPITAAVLIIYPLVLAFLFAFCIERLNFLRR 1449 (1449)
Q Consensus 1417 ~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1449 (1449)
++.|.++++|++++++|+++++++|++-...+|
T Consensus 585 ~~~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 585 ADLYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 999999999999999999999999998766665
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=9.4e-91 Score=942.74 Aligned_cols=564 Identities=24% Similarity=0.396 Sum_probs=494.8
Q ss_pred ccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCC--CeeEEEEEEcCccCcc--ccccceEEEEccCCCCCC
Q 000517 872 RKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTS--GYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHSP 947 (1449)
Q Consensus 872 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~ 947 (1449)
.++.+|+|||+.++|||+++|+||||||||||||+|+|+..+ .+.+|+|.+||.+... ..+++.++||+|+|.|++
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 456799999999999999999999999999999999998532 2368999999987532 235567999999999999
Q ss_pred CCCHHHHHHHHHHhccCC----CCChHHHHH-HHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000517 948 NITVEESVIFSAWLRLAP----EINSKTKAE-FVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSII 1022 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~----~~~~~~~~~-~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~il 1022 (1449)
.+||+|+|.|++.++.+. ....++..+ .++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|+|+
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 999999999998887643 123333333 357789999999999999998888999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCCChhHHHHHHhcCC
Q 000517 1023 FMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKHSSQVIEYFEGIS 1101 (1449)
Q Consensus 1023 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~~~~~~~~~f~~~~ 1101 (1449)
||||||+|||+.++..+++.|++++++ |+|||+++|||+.++++.||++++|. +|+++|+|+. +++.+||+++
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~-~G~iv~~G~~----~~~~~yF~~l- 305 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLY-EGYQIYFGPA----DKAKQYFEKM- 305 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEe-CCeEEEECCH----HHHHHHHHHc-
Confidence 999999999999999999999999874 99999999999888999999999998 5899999996 6899999998
Q ss_pred CCCCCCCCCCCCcceeeccCchhhh----------hhhhHHHHHHHhcHHHHHHHHHHHhhCCCC---------------
Q 000517 1102 GVPKIRNNYNPATWVIEVTSTSAEA----------ELCVDFAQIFRESVLYENNRELVKQLNTPP--------------- 1156 (1449)
Q Consensus 1102 ~~~~~~~~~npa~~~l~v~~~~~~~----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~--------------- 1156 (1449)
|. +||+++|||||++|+++++.+. ....+|++.|++|+.+++..+.+++.....
T Consensus 306 G~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (1394)
T TIGR00956 306 GF-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVA 384 (1394)
T ss_pred CC-CCCCCCChHHHHHhccChhhhhccccccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHh
Confidence 54 6999999999999998764311 123589999999998887766554321110
Q ss_pred CCCCCCCCCCccCcchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHHHHHH
Q 000517 1157 PGSKDLHFPTRFSRNFWGQFKSCLWKLHLSYWRSPSYNLMRIMHTATASLLFGVLFWDHGQKLDNQQDLFNIVGSSYLAV 1236 (1449)
Q Consensus 1157 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~ 1236 (1449)
..++.....+.|..|+|+|+++|++|+++++||||.++++|+++++++|+++|++||+++. ++++++++.|++|+++
T Consensus 385 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~ 461 (1394)
T TIGR00956 385 KQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAI 461 (1394)
T ss_pred hhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHH
Confidence 0011122334688999999999999999999999999999999999999999999999986 4578999999999999
Q ss_pred HHHHHHHHHhHHhhHHHhhHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccchhHHHHHHHHHH
Q 000517 1237 VFLGINNCSSVIPNVARERTVMYREGFAGMYSPWAYALAQVTVEIPYLLIQALSYVIIGYPMIGYYWSAYKLFWNFYGMF 1316 (1449)
Q Consensus 1237 ~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~ 1316 (1449)
++.++.++..+ +.+..||+||+|||.+++|++++|++|++++|+|+.++.+++|++|+|||+||++++++||+|+++++
T Consensus 462 ~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~ 540 (1394)
T TIGR00956 462 LFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILF 540 (1394)
T ss_pred HHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHH
Confidence 99999887665 45567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhCHHHHHHHHHHHHHhCCCcccee
Q 000517 1317 CTMMFYNYLGMLLVSLTPNSMIASILSSVCYTLFNLFAGFLIPGPKIPKWWIWMYYMMPTSWALNAMVTSQYGDIDKEMI 1396 (1449)
Q Consensus 1317 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~ 1396 (1449)
++.++++++|+++++++||..+|+.++++++.++++|+||++|+++||+||+|++|+||++|+++|+++|||++...+|.
T Consensus 541 l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~ 620 (1394)
T TIGR00956 541 ICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECS 620 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998776553
Q ss_pred e--c----------------------CCC-ccHHHHHHhhcCCccCChhhhHHHHHHHHHHHHHHHHHHHHhccc
Q 000517 1397 V--F----------------------GET-KKLSSFIQDYFGFHHDRLPITAAVLIIYPLVLAFLFAFCIERLNF 1446 (1449)
Q Consensus 1397 ~--~----------------------~~~-~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1446 (1449)
. | |.+ +++.+|+...||++++++|+|++++++|+++|++++++++++++.
T Consensus 621 ~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 621 QYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred ccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 0 1 111 356789988899999999999999999999999999999999873
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=8e-90 Score=928.21 Aligned_cols=566 Identities=25% Similarity=0.420 Sum_probs=486.3
Q ss_pred ccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC-eeEEEEEEcCccCccccccceEEEEccCCCCCCCCC
Q 000517 872 RKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG-YVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNIT 950 (1449)
Q Consensus 872 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lT 950 (1449)
.++.+|+|||+.++|||+++|+|||||||||||++|+|+..+. ..+|+|.+||.+......++.++||+|+|.|++.+|
T Consensus 176 ~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lT 255 (1470)
T PLN03140 176 TKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMT 255 (1470)
T ss_pred ccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCc
Confidence 3567999999999999999999999999999999999986542 358999999988654344678999999999999999
Q ss_pred HHHHHHHHHHhccCCC-------CChHHH------------------------HHHHHHHHHHcCCcccccccccCCCCC
Q 000517 951 VEESVIFSAWLRLAPE-------INSKTK------------------------AEFVNEVLETIELDAIKDSLVGIPGVN 999 (1449)
Q Consensus 951 v~e~l~f~~~lr~~~~-------~~~~~~------------------------~~~v~~~l~~l~L~~~~~~~vg~~~~~ 999 (1449)
|+|+|.|++.++.+.. ...+++ +..++++++.+||++++|+.+|+..++
T Consensus 256 V~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~r 335 (1470)
T PLN03140 256 VKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIR 335 (1470)
T ss_pred HHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCcccc
Confidence 9999999988764211 111111 123678999999999999999998889
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000517 1000 GLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGG 1078 (1449)
Q Consensus 1000 ~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG 1078 (1449)
+|||||||||+||++|+.+|+++||||||+|||+.++..+++.|+++++ .|+|||+++|||+.++++.||++++|. +|
T Consensus 336 glSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~-~G 414 (1470)
T PLN03140 336 GISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLS-EG 414 (1470)
T ss_pred CCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEee-Cc
Confidence 9999999999999999999999999999999999999999999999986 589999999999889999999999998 58
Q ss_pred EEEEecCCCCChhHHHHHHhcCCCCCCCCCCCCCCcceeeccCchhh-h-----------hhhhHHHHHHHhcHHHHHHH
Q 000517 1079 RIIYCGPLGKHSSQVIEYFEGISGVPKIRNNYNPATWVIEVTSTSAE-A-----------ELCVDFAQIFRESVLYENNR 1146 (1449)
Q Consensus 1079 ~~v~~G~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~v~~~~~~-~-----------~~~~~~~~~~~~s~~~~~~~ 1146 (1449)
+++|+||. +++.+||+++ |. +||+++|||||++|+++.... . ....+|++.|++|+.+++..
T Consensus 415 ~ivy~G~~----~~~~~yF~~l-Gf-~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~ 488 (1470)
T PLN03140 415 QIVYQGPR----DHILEFFESC-GF-KCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLE 488 (1470)
T ss_pred eEEEeCCH----HHHHHHHHHc-CC-CCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHH
Confidence 99999996 6899999999 54 699999999999999986432 1 12357899999998887665
Q ss_pred HHHHhhCCCCCCCCCCCCCCccCcchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHH
Q 000517 1147 ELVKQLNTPPPGSKDLHFPTRFSRNFWGQFKSCLWKLHLSYWRSPSYNLMRIMHTATASLLFGVLFWDHGQKLDNQQDLF 1226 (1449)
Q Consensus 1147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~ 1226 (1449)
+.++.........+.....++|..++|.|++.|++|+++..||||.++..|+++.+++|+++|++||+++.+..+..+.+
T Consensus 489 ~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~ 568 (1470)
T PLN03140 489 NELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGA 568 (1470)
T ss_pred HHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHH
Confidence 44332110000111111234689999999999999999999999999999999999999999999999986544455667
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHhhHHHhhHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccchh
Q 000517 1227 NIVGSSYLAVVFLGINNCSSVIPNVARERTVMYREGFAGMYSPWAYALAQVTVEIPYLLIQALSYVIIGYPMIGYYWSAY 1306 (1449)
Q Consensus 1227 ~~~g~~f~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~m~g~~~~~~ 1306 (1449)
.+.|++|+++++..++++ ..++.+..||+||+|||.+++|++++|++|++++|+|+.++.+++|++|+|||+||+++++
T Consensus 569 ~~~g~lff~~l~~~~~~~-~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~ 647 (1470)
T PLN03140 569 LYIGALLFSMIINMFNGF-AELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEAS 647 (1470)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchh
Confidence 788999999998887765 4467788899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhCHHHHHHHHHHHH
Q 000517 1307 KLFWNFYGMFCTMMFYNYLGMLLVSLTPNSMIASILSSVCYTLFNLFAGFLIPGPKIPKWWIWMYYMMPTSWALNAMVTS 1386 (1449)
Q Consensus 1307 ~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~ 1386 (1449)
+||.|+++++++.++++++++++++++|+..+|+.++++++.++++|+||+||+++||+||+|++|+||++|+++|+++|
T Consensus 648 ~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~N 727 (1470)
T PLN03140 648 RFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVN 727 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhCCCccc-eeecCCCccHHHHHHhhcCCccC--ChhhhHHHHHHHHHHHHHHHHHHHHhcc
Q 000517 1387 QYGDIDKE-MIVFGETKKLSSFIQDYFGFHHD--RLPITAAVLIIYPLVLAFLFAFCIERLN 1445 (1449)
Q Consensus 1387 ~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~il~~~~~~f~~~~~~~l~~~~ 1445 (1449)
||.+.... +.+.+...+.++.+++.+|+..+ +.|+++++|+||+++|+++++++|++++
T Consensus 728 Ef~~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~ 789 (1470)
T PLN03140 728 EMFAPRWMNKMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLN 789 (1470)
T ss_pred hccCccccCcccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99775432 21222223334444478899765 5699999999999999999999999987
No 9
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-81 Score=787.74 Aligned_cols=583 Identities=30% Similarity=0.517 Sum_probs=491.7
Q ss_pred CCCceEEEeeeEEEEEeeecCCCCCCCchhhhhhhhhccccccCccccccccccccceeeEEeCCeEEEEEcCCCCcHHH
Q 000517 133 LPTIEVRYKNLCVEAKCEVVHGKPLPTLWNSFKGMISVLPKLSGYKSLEAKINILNHVSGILKPGRMTLLLGPPGCGKST 212 (1449)
Q Consensus 133 ~p~v~v~~~~L~v~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 212 (1449)
...++++|+|+++++.. . .+ ..+++|+||||+++|||++|||||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~-~---------------------------~~-~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKE-K---------------------------SK-KTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecC-C---------------------------CC-ccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 45788999999998876 1 01 2357999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhc
Q 000517 213 FLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEA 292 (1449)
Q Consensus 213 LL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 292 (1449)
||++|+|+..+...++|+|++||++.+....++.+|||.|+|.++|++||+|||.|+|.++.+.. +++.++
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~~~~~k-- 142 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------LSKEEK-- 142 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------CCHHHH--
Confidence 99999999987667899999999887766678899999999999999999999999999986542 122222
Q ss_pred CCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCC
Q 000517 293 GIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNG 372 (1449)
Q Consensus 293 ~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsg 372 (1449)
+.++|.+++.|||.+|+||++|+...|||||||||||+||..|+.+|.||||||||||
T Consensus 143 ----------------------~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 143 ----------------------RERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred ----------------------HHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 3468999999999999999999988899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhhHH
Q 000517 373 LDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFL 452 (1449)
Q Consensus 373 LDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl 452 (1449)
|||.++.++++.|+++|+. |+|||+++|||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcChhhhhhhhcccCCCCccCCHHHHHHHHh-cChhhHhHHHHhcCcccCCCCCCCccccCcc-cccHHHHHHHHHHH
Q 000517 453 QEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFK-ESPLVKKLDEELLVPYDKSKSPKNAISFSVY-SLSRWELFKACMSR 530 (1449)
Q Consensus 453 ~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~~~l~~R 530 (1449)
.++.+..++.+.... ........+.++ .....+... ......... . ..+.+ ..++|.|+..+.+|
T Consensus 280 l~l~s~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~----~~~~~~~~s~~~q~~~L~~R 346 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEE------AVRIAKLINKFSQTDNLKKTLE-ALEKSLSTS--K----KVEIGTSPSWWTQFKILLKR 346 (613)
T ss_pred HHHHccCCCchhHHh------HHHHHHHhhhccccchhhhhHH-HHhhhcccc--c----ccccccCCcHHHHHHHHHHH
Confidence 998874311000000 000001111111 000000000 000000000 0 00111 67899999999999
Q ss_pred HHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhhhHHHHHHHHHHHHhhHH-HHHHHHhhhhhHHHhhc
Q 000517 531 ELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYYMGSLYFSLVVLLVDGMP-ELSMTIQRLEVFYKQQE 609 (1449)
Q Consensus 531 ~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~-~~~~~~~~~~vf~k~r~ 609 (1449)
.++..+|++..+..|..|.+++++++|++|++.+ .+........|.+||.+.+..+..+. .++.+.+++++|.||+.
T Consensus 347 ~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~--~~~~~~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~~ 424 (613)
T KOG0061|consen 347 SLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLG--NDAKGIQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRETS 424 (613)
T ss_pred HhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCC--CchHHHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHh
Confidence 9999999999999999999999999999999763 33334447788888888887666554 68899999999999999
Q ss_pred ccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHH
Q 000517 610 LCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQFILLFASHFTSISMFRFMASVFQTEFAAMTAG 689 (1449)
Q Consensus 610 ~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~ 689 (1449)
.+.|+.++|++++.+.++|+.++.+++|.+++|||+|+.++..+|+.+.++.++..+++.+++.+++++.++...|.+++
T Consensus 425 ~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~~ 504 (613)
T KOG0061|consen 425 SGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSLG 504 (613)
T ss_pred cCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeehH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHHHhhcCCcccccCC---CCccchhhhhccCCcccccchh
Q 000517 690 SVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFLAPRWQKMLP---TNTTIGQEILESRGLNFDGFIF 766 (1449)
Q Consensus 690 ~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~---~~~~~G~~~L~~~g~~~~~~~~ 766 (1449)
+++++.+++++||+++.+++|.||+|+.|+|+++|++++++.|||.+....|... .+...|.++++..++...+ .
T Consensus 505 ~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~ 582 (613)
T KOG0061|consen 505 PVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDSS--F 582 (613)
T ss_pred HHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCcccc--c
Confidence 9999999999999999999999999999999999999999999998733333221 2456788899888876544 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc
Q 000517 767 WISLGALFGIALLLNIGFTLALTFLKS 793 (1449)
Q Consensus 767 w~~~~~l~g~~~~f~i~~~laL~~~~~ 793 (1449)
|.++.+++++.++|.++++++|++...
T Consensus 583 ~~~l~~l~~~~~~~~il~y~~L~~~~~ 609 (613)
T KOG0061|consen 583 WLDLLVLLAFIVFFRVLGYLALRFRVK 609 (613)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 889999999999999999999988653
No 10
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.3e-83 Score=800.84 Aligned_cols=566 Identities=27% Similarity=0.478 Sum_probs=499.3
Q ss_pred ccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC-eeEEEEEEcCccCccccccceEEEEccCCCCCCCCC
Q 000517 872 RKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG-YVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNIT 950 (1449)
Q Consensus 872 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lT 950 (1449)
.+..+|+|+|+.++||+++.++||+||||||||++|+|..+.. ...|+|.+||++.+...-++.++|+.|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3457999999999999999999999999999999999965432 235799999998765444788999999999999999
Q ss_pred HHHHHHHHHHhccCCCC----ChHHHH-HHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000517 951 VEESVIFSAWLRLAPEI----NSKTKA-EFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMD 1025 (1449)
Q Consensus 951 v~e~l~f~~~lr~~~~~----~~~~~~-~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLD 1025 (1449)
|+|+|.|+++++.+... .+.++. +..+.+++.+||++++|++||+...+|+||||||||+||.+++.+|+++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 99999999999987322 222222 2678999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCCChhHHHHHHhcCCCCC
Q 000517 1026 EPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKHSSQVIEYFEGISGVP 1104 (1449)
Q Consensus 1026 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~~~~~~~~~f~~~~~~~ 1104 (1449)
|+|+|||+.++.++.+.||++++. +.|+++++|||+.+++++||++++|.+ |+++|+||. +++++||+++ |.
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~-Gf- 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDM-GF- 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhc-Cc-
Confidence 999999999999999999999864 899999999999999999999999985 899999997 6899999998 44
Q ss_pred CCCCCCCCCcceeeccCchhhh-----------h-hhhHHHHHHHhcHHHHHHHHHHHhhCCCCCCCCCCCCCCccCcch
Q 000517 1105 KIRNNYNPATWVIEVTSTSAEA-----------E-LCVDFAQIFRESVLYENNRELVKQLNTPPPGSKDLHFPTRFSRNF 1172 (1449)
Q Consensus 1105 ~~~~~~npa~~~l~v~~~~~~~-----------~-~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1172 (1449)
.||+..++|||+.++++...+. . ...+|.+.|.+|+.+++....++........++.....++|..|+
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~ 438 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPY 438 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccH
Confidence 6999999999999999832211 1 125899999999998877654432211112223333456899999
Q ss_pred HHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHHhHHhhHH
Q 000517 1173 WGQFKSCLWKLHLSYWRSPSYNLMRIMHTATASLLFGVLFWDHGQKLDNQQDLFNIVGSSYLAVVFLGINNCSSVIPNVA 1252 (1449)
Q Consensus 1173 ~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~~f~~~~~~~~~~~~~~~~~~~ 1252 (1449)
|.|++.|+.|.++.+.||..|...++++.+++|+++|++|++.+. .+..+.+.+.|++||++++..++++..+ +...
T Consensus 439 ~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~ 515 (1391)
T KOG0065|consen 439 WEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTF 515 (1391)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHH
Confidence 999999999999999999999999999999999999999999982 5667889999999999999988877665 4455
Q ss_pred HhhHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000517 1253 RERTVMYREGFAGMYSPWAYALAQVTVEIPYLLIQALSYVIIGYPMIGYYWSAYKLFWNFYGMFCTMMFYNYLGMLLVSL 1332 (1449)
Q Consensus 1253 ~er~v~~rE~~~~~Y~~~~y~~a~~~~e~p~~~~~~~~~~~i~Y~m~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~ 1332 (1449)
+.|+||+|||...+|++++|.++..+.++|..++.+++|.+|+||++||.+++++||.|+++++++..++.++.++++++
T Consensus 516 ~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l 595 (1391)
T KOG0065|consen 516 QRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASL 595 (1391)
T ss_pred hhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhCHHHHHHHHHHHHHhCCCccceee---------------
Q 000517 1333 TPNSMIASILSSVCYTLFNLFAGFLIPGPKIPKWWIWMYYMMPTSWALNAMVTSQYGDIDKEMIV--------------- 1397 (1449)
Q Consensus 1333 ~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~~--------------- 1397 (1449)
+++..+|+.++++.+.+..+++||+||.++||+||+|++|+||+.|+++++++|||++.+.+|..
T Consensus 596 ~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c 675 (1391)
T KOG0065|consen 596 SRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVC 675 (1391)
T ss_pred cchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998766641
Q ss_pred ------cCCC-ccHHHHHHhhcCCccCChhhhHHHHHHHHHHHHHHHHHHHHhcccc
Q 000517 1398 ------FGET-KKLSSFIQDYFGFHHDRLPITAAVLIIYPLVLAFLFAFCIERLNFL 1447 (1449)
Q Consensus 1398 ------~~~~-~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~ 1447 (1449)
+|.. +.+.+|++..|++++.+.|++++|++||.++|.++..+++.|+|.-
T Consensus 676 ~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~ 732 (1391)
T KOG0065|consen 676 AATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL 732 (1391)
T ss_pred hhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 1111 3457788888899999999999999999999999999999999853
No 11
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=5.4e-79 Score=773.65 Aligned_cols=609 Identities=23% Similarity=0.372 Sum_probs=473.3
Q ss_pred CCCCceEEEeeeEEEEEeeecCCCCCCCchhhhhhhhhccccccCccccccccccccceeeEEeCCeEEEEEcCCCCcHH
Q 000517 132 KLPTIEVRYKNLCVEAKCEVVHGKPLPTLWNSFKGMISVLPKLSGYKSLEAKINILNHVSGILKPGRMTLLLGPPGCGKS 211 (1449)
Q Consensus 132 ~~p~v~v~~~~L~v~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKS 211 (1449)
..++++++|.|++|.+.. .....+. ..+...+...........+..++++|+|+|++++|||+++|+||||||||
T Consensus 34 ~~~~~~~~~~~~~y~~~~-~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKS 108 (659)
T PLN03211 34 SCYPITLKFMDVCYRVKF-ENMKNKG----SNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKS 108 (659)
T ss_pred CCCceEEEEEeEEEEEcc-CCCcccc----cccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHH
Confidence 346899999999999875 1101000 01111111110000000111235799999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHh
Q 000517 212 TFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKE 291 (1449)
Q Consensus 212 TLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~ 291 (1449)
|||++|+|+++|+ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++.... .++.++
T Consensus 109 TLL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~-------~~~~~~- 178 (659)
T PLN03211 109 TLLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS-------LTKQEK- 178 (659)
T ss_pred HHHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-------CCHHHH-
Confidence 9999999999874 3589999999987542 23568999999999999999999999876542211 011110
Q ss_pred cCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCC
Q 000517 292 AGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITN 371 (1449)
Q Consensus 292 ~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPts 371 (1449)
...++++++.+||++++||.+|+...++|||||||||+||++|+.+|++|+|||||+
T Consensus 179 -----------------------~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPts 235 (659)
T PLN03211 179 -----------------------ILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTS 235 (659)
T ss_pred -----------------------HHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCC
Confidence 123577899999999999999998899999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhhH
Q 000517 372 GLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDF 451 (1449)
Q Consensus 372 gLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adf 451 (1449)
|||+.++.++++.|+++++ .++|+|+++|||..+++++||+|++|++|+++|+|+.+++.+||+++||+||++.|||||
T Consensus 236 gLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf 314 (659)
T PLN03211 236 GLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADF 314 (659)
T ss_pred CcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHH
Confidence 9999999999999999986 589999999999988999999999999999999999999999999999999999999999
Q ss_pred HHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhHhHHHHhcC---cccCCC-----CCCC-ccccCcccccHHH
Q 000517 452 LQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDEELLV---PYDKSK-----SPKN-AISFSVYSLSRWE 522 (1449)
Q Consensus 452 l~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~---~~~~~~-----~~~~-~~~~~~~~~s~~~ 522 (1449)
++++++...+.+.....+.+ ...+.+.+.|++.. .+...+.... ...... ..+. ......+..++|.
T Consensus 315 ~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 390 (659)
T PLN03211 315 LLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLL-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFN 390 (659)
T ss_pred HHHHcCccccCCCccccccc---hHHHHHHHHHHhhc-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHH
Confidence 99998764321100000111 11122333443211 1111111000 000000 0000 0011224567999
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhhhHHHHHHHHHHHH-hhHHHHHHHHhhh
Q 000517 523 LFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYYMGSLYFSLVVLLV-DGMPELSMTIQRL 601 (1449)
Q Consensus 523 ~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~g~lff~~~~~~~-~~~~~~~~~~~~~ 601 (1449)
|+..+++|.++. +|+......|+++.+++|+++|++|++.+ ..+.+.+.|++||++++..+ ..++.++.+..++
T Consensus 391 Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 391 QFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999888 67777778999999999999999999753 23567788999999877554 5567888999999
Q ss_pred hhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 000517 602 EVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQFILLFASHFTSISMFRFMASVFQT 681 (1449)
Q Consensus 602 ~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l~l~l~~~~~~sl~~~i~a~~~~ 681 (1449)
++|+|||..++|++++|++++++.++|+.++.+++|.+++|||+|+.+++.+|+.+++++++..+++.+++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHHHhhcCCc-----ccccCCC-Cccchhhhhc
Q 000517 682 EFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFLAPR-----WQKMLPT-NTTIGQEILE 755 (1449)
Q Consensus 682 ~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~-----~~~~~~~-~~~~G~~~L~ 755 (1449)
...|+.+++++++++++|+||+++ +||+||+|++|+||++|++++++.|||.+.+ ..|..+. ....+..++.
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~ 623 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE 623 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch
Confidence 999999999999999999999997 7999999999999999999999999997653 2343221 1111122333
Q ss_pred cCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000517 756 SRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLK 792 (1449)
Q Consensus 756 ~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~ 792 (1449)
...+. ....|.++++++++.++|.++.+++|++.+
T Consensus 624 ~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 624 EDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33332 234788999999999999999999998653
No 12
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.8e-79 Score=779.76 Aligned_cols=569 Identities=27% Similarity=0.452 Sum_probs=483.2
Q ss_pred ccccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCC
Q 000517 181 EAKINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 181 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 260 (1449)
+.++++|+|+|+.++|||+++|+|||||||||||++|+|+.+++...+|+|.+||.+++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 34567999999999999999999999999999999999999876556899999999876444467899999999999999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccc-
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAM- 339 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~- 339 (1449)
||+|||.|+++++.+... .+.+ .+..++.+++.|||++++||.||++.
T Consensus 115 TV~e~l~f~~~~~~~~~~-------~~~~------------------------~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRV-------TKKE------------------------KRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCC-------CHHH------------------------HHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 999999999887643211 1111 11246789999999999999999863
Q ss_pred cccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeC
Q 000517 340 RRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAE 419 (1449)
Q Consensus 340 ~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~ 419 (1449)
.|||||||||||+||++|+.+|+++||||||+|||+.++.++++.|+++++ .++|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 689999999999999999999999999999999999999999999999986 4899999999999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhHhHHHHhcC
Q 000517 420 GKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDEELLV 499 (1449)
Q Consensus 420 G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 499 (1449)
|+++|+|+++++.+||+++||+||++.||+||+.++++....... ......+++.+.|+.++..++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-------ESRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-------chHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998865322110 0112234556666666555544433321
Q ss_pred cccCCC---CCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhhh
Q 000517 500 PYDKSK---SPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYYM 576 (1449)
Q Consensus 500 ~~~~~~---~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~ 576 (1449)
....+. ..........+..+++.|+..+++|.++..+||+..+..++++.+++++++|++|++.+ .+....+.+.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~--~~~~~~~~~~ 393 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQG--LTQKGVQNIN 393 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCC--CCHHHHHHHH
Confidence 111100 00011122456788999999999999999999999999999999999999999999754 3334566678
Q ss_pred HHHHHHHHHHHHhhH-HHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHHHH
Q 000517 577 GSLYFSLVVLLVDGM-PELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFF 655 (1449)
Q Consensus 577 g~lff~~~~~~~~~~-~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~f~ 655 (1449)
|++|+.++...+.++ ..++.+..++++|+||+..++|++++|++++.+.++|+.++.+++|.+++|||+|+.+++.+|+
T Consensus 394 g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~ 473 (617)
T TIGR00955 394 GALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFL 473 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHH
Confidence 899999887777654 5567788999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHHHhhc
Q 000517 656 RQFILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFL 735 (1449)
Q Consensus 656 ~~~l~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~ 735 (1449)
.+++++++..+++.++++++++++++...|..+++++++++++|+||+++.++||+||+|++|+||++|++++++.|||.
T Consensus 474 ~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~ 553 (617)
T TIGR00955 474 TFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWS 553 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCcc-cccCCC----CccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 000517 736 APRW-QKMLPT----NTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLK 792 (1449)
Q Consensus 736 ~~~~-~~~~~~----~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~ 792 (1449)
+..+ .|...+ +...|..+|+.+|+..+ ++|.++++++++.++|.++++++|++..
T Consensus 554 ~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~~ 613 (617)
T TIGR00955 554 DVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIRI 613 (617)
T ss_pred CCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8776 343211 23458999999998764 4588999999999999999999998753
No 13
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.6e-72 Score=709.23 Aligned_cols=213 Identities=27% Similarity=0.407 Sum_probs=182.0
Q ss_pred cEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000517 847 LTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYP 926 (1449)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 926 (1449)
-.++|+||++.++..+ ...+|+|+|++|++|+.+||+|||||||||.+.+|-+..+ +.+|.|.|||++
T Consensus 986 G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYd--p~~G~V~IDg~d 1053 (1228)
T KOG0055|consen 986 GDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYD--PDAGKVKIDGVD 1053 (1228)
T ss_pred eEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCcc
Confidence 4689999999998654 4679999999999999999999999999999999987544 468999999998
Q ss_pred Ccc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHH-------cCCcccccccccCC
Q 000517 927 KVQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLET-------IELDAIKDSLVGIP 996 (1449)
Q Consensus 927 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~-------l~L~~~~~~~vg~~ 996 (1449)
+++ +.+|+++|.|.|+|.+|. -|++||+.|+ .. +.+.++ +.+.++. .+|.+-.||.||..
T Consensus 1054 ik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG-~~----~vs~~e----Ii~Aak~ANaH~FI~sLP~GyDT~vGer 1123 (1228)
T KOG0055|consen 1054 IKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYG-SE----EVSEEE----IIEAAKLANAHNFISSLPQGYDTRVGER 1123 (1228)
T ss_pred cccCCHHHHHHhcceeccCchhhc-ccHHHHHhcc-CC----CCCHHH----HHHHHHHhhhHHHHhcCcCcccCccCcc
Confidence 654 567899999999999974 7999999997 11 123322 2223322 36777899999988
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 997 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 997 ~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
|. +||||||||++||||+++||+||+|||.||.||+++.+.|+++|.+. ..|+|.|+++|++| ..+.+|.+.+++
T Consensus 1124 G~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a-~~gRT~IvIAHRLS--TIqnaD~I~Vi~- 1198 (1228)
T KOG0055|consen 1124 GV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRA-MEGRTTIVIAHRLS--TIQNADVIAVLK- 1198 (1228)
T ss_pred cC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHh-hcCCcEEEEecchh--hhhcCCEEEEEE-
Confidence 76 69999999999999999999999999999999999999999999996 46999999999986 468899999998
Q ss_pred CcEEEEecCC
Q 000517 1077 GGRIIYCGPL 1086 (1449)
Q Consensus 1077 gG~~v~~G~~ 1086 (1449)
+|++++.|+-
T Consensus 1199 ~G~VvE~GtH 1208 (1228)
T KOG0055|consen 1199 NGKVVEQGTH 1208 (1228)
T ss_pred CCEEEecccH
Confidence 6999999984
No 14
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=4.9e-69 Score=724.38 Aligned_cols=802 Identities=19% Similarity=0.254 Sum_probs=483.3
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC--CCceEEEEcCCCccCCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV--PPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1449)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+|
T Consensus 943 k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~Pt---sG~I~i~G~dI~~~~~~~r~~IG~~pQ~~~L~~~LT 1019 (2272)
T TIGR01257 943 RPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPT---SGTVLVGGKDIETNLDAVRQSLGMCPQHNILFHHLT 1019 (2272)
T ss_pred ceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCC---ceEEEECCEECcchHHHHhhcEEEEecCCcCCCCCC
Confidence 46999999999999999999999999999999999999998 999999999875321 2467999999999999999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+||+.|.++.++.... + .+..++++++.+||++..|+.+++
T Consensus 1020 V~E~L~f~~~lkg~~~~----------~------------------------~~~~v~~lL~~vgL~~~~~~~~~~---- 1061 (2272)
T TIGR01257 1020 VAEHILFYAQLKGRSWE----------E------------------------AQLEMEAMLEDTGLHHKRNEEAQD---- 1061 (2272)
T ss_pred HHHHHHHHHHhcCCCHH----------H------------------------HHHHHHHHHHHcCCchhhcCChhh----
Confidence 99999998776542110 0 011356789999999988888876
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
|||||||||+||+||+++|++++|||||+|||+.++..+++.|+++. .++|+|++. |..+++..++|+|++|++|+
T Consensus 1062 -LSGGqKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~--~g~TIIltT-Hdmdea~~laDrI~iL~~Gk 1137 (2272)
T TIGR01257 1062 -LSGGMQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR--SGRTIIMST-HHMDEADLLGDRIAIISQGR 1137 (2272)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh--CCCEEEEEE-CCHHHHHHhCCEEEEEECCE
Confidence 99999999999999999999999999999999999999999999984 367777665 56788999999999999999
Q ss_pred EEEecChhhHHHHHHhcCCCC-------------------------------CCCC-----------C---hhhHHHHhc
Q 000517 422 IVYHGPQDHVLAFFEDCGFRC-------------------------------PERK-----------G---VSDFLQEVL 456 (1449)
Q Consensus 422 iv~~G~~~~~~~~F~~~Gf~~-------------------------------p~~~-----------~---~adfl~ev~ 456 (1449)
+++.|+.+++.+.|. .||.. |.+. + ..++++...
T Consensus 1138 L~~~Gs~~~Lk~~~g-~gy~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~~~i 1216 (2272)
T TIGR01257 1138 LYCSGTPLFLKNCFG-TGFYLTLVRKMKNIQSQRGGCEGTCSCTSKGFSTRCPARVDEITPEQVLDGDVNELMDLVYHHV 1216 (2272)
T ss_pred EEEecCHHHHHHhcC-CcEEEEEEecccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHhC
Confidence 999999999987663 34421 1000 0 111222111
Q ss_pred Chhhhh---hhhcccCCCCccCCHHHHHHHHhcChhhH--------------------hHHHHhcC--------------
Q 000517 457 SRKDQA---QFWLHTELPYSYFSVDMFSKKFKESPLVK--------------------KLDEELLV-------------- 499 (1449)
Q Consensus 457 s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--------------------~~~~~~~~-------------- 499 (1449)
...... ........|..+.....|...|++-+... ++.++...
T Consensus 1217 P~a~l~~~~g~el~y~LP~~~~~~~~f~~lf~~Le~~~~~lgi~sygis~tTLEeVFlkv~~~~~~~~~~~~~~~~~~~~ 1296 (2272)
T TIGR01257 1217 PEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLSSFGISDTPLEEIFLKVTEDADSGSLFAGGAQQKREN 1296 (2272)
T ss_pred CCcEEEeccCCEEEEEecccccccchHHHHHHHHHhhHhhCCCceEEeecCCHHHHHHHhhhhccccccccccccccccc
Confidence 100000 00000011221111112333322111000 00000000
Q ss_pred ---------cccCCCCCC--------C--------------c---cccCcccccHHHHHHHHHHHHHHHHhhchHHHHHH
Q 000517 500 ---------PYDKSKSPK--------N--------------A---ISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFK 545 (1449)
Q Consensus 500 ---------~~~~~~~~~--------~--------------~---~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~ 545 (1449)
+.+...... . . .....-..-+++|+++++.+.+...+||+..+++.
T Consensus 1297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tg~~L~~qQf~All~KR~~~~~Rd~k~~~~q 1376 (2272)
T TIGR01257 1297 ANLRHPCSGPTEKAGQTPQASHTCSPGQPAAHPEGQPPPEPEDPGVPLNTGARLILQHVQALLVKRFQHTIRSHKDFLAQ 1376 (2272)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 000000000 0 0 00000011357899999999999999999887766
Q ss_pred HHHHHHHHH---HHHHH----------------H------hccc------------------------------------
Q 000517 546 TTQLIMLAT---MAMTV----------------F------LRTR------------------------------------ 564 (1449)
Q Consensus 546 ~~~~~i~al---i~g~v----------------f------~~~~------------------------------------ 564 (1449)
++..+++.+ ++..+ | +...
T Consensus 1377 illPi~fv~lal~~~~~~~~~~~~p~l~Ls~~~Y~~~~~~~s~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 1456 (2272)
T TIGR01257 1377 IVLPATFVFLALMLSIIIPPFGEYPALTLHPWMYGQQYTFFSMDEPNSEHLEVLADVLLNKPGFGNRCLKEEWLPEYPCG 1456 (2272)
T ss_pred HHHHHHHHHHHHHHHhhcccccCCCCeecchhhccCcceeccccccccccccchhhhhhccccccccccccccccccccc
Confidence 654433222 21110 0 0000
Q ss_pred C------C----------------------------------------------------c------cc----cch----
Q 000517 565 M------E----------------------------------------------------I------DV----FHG---- 572 (1449)
Q Consensus 565 ~------~----------------------------------------------------~------~~----~~~---- 572 (1449)
. . . +. ...
T Consensus 1457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~n~sdyll~ 1536 (2272)
T TIGR01257 1457 NSTPWKTPSVSPNITHLFQKQKWTAAHPSPSCRCSTREKLTMLPECPEGAGGLPPPQRTQRSTEILQDLTDRNISDFLVK 1536 (2272)
T ss_pred ccccccccchhHHHHHHHhhccccccccccccccccccccccccccccccccCCCcccccccchhhhhhcccchHHHHhh
Confidence 0 0 0 00 000
Q ss_pred ------------------hhh-------------------hHH-------------------------------------
Q 000517 573 ------------------NYY-------------------MGS------------------------------------- 578 (1449)
Q Consensus 573 ------------------~~~-------------------~g~------------------------------------- 578 (1449)
..+ .++
T Consensus 1537 ~~~~~~~~~~~~~~~~~~~ry~~~s~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1616 (2272)
T TIGR01257 1537 TYPALIRSSLKSKFWVNEQRYGGISIGGKLPAIPITGEALVGFLSDLGQMMNVSGGPVTREASKEMPDFLKHLETEDNIK 1616 (2272)
T ss_pred hhhhhhccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccccccchhhhhhhccccCcceE
Confidence 000 000
Q ss_pred ------------HHHHHHHHHHh-h------------------------------------------------HHHHHHH
Q 000517 579 ------------LYFSLVVLLVD-G------------------------------------------------MPELSMT 597 (1449)
Q Consensus 579 ------------lff~~~~~~~~-~------------------------------------------------~~~~~~~ 597 (1449)
++..++...+. . ++-++..
T Consensus 1617 vwfNn~~~Hs~p~~lN~l~NaiLr~~~~~~~~~~~~~I~v~N~Plp~t~~~~~~~~~~~~~~~~~iai~ii~~~sfi~as 1696 (2272)
T TIGR01257 1617 VWFNNKGWHALVSFLNVAHNAILRASLPKDRDPEEYGITVISQPLNLTKEQLSEITVLTTSVDAVVAICVIFAMSFVPAS 1696 (2272)
T ss_pred EEEcCCcccHHHHHHHHHHHHHHHHhcccccCCccceEEEEecCCCCchhhhhhhhhcccchhHHHHHHHHHHHHHHHHH
Confidence 00000000000 0 0000000
Q ss_pred HhhhhhHHHhhcccc--------cchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc--CCcccHHHHHHHHHHHHHHHHH
Q 000517 598 IQRLEVFYKQQELCF--------YPAWAYAIPATILKVPLSLVASLAWTCLTYYVI--GYSPEVWRFFRQFILLFASHFT 667 (1449)
Q Consensus 598 ~~~~~vf~k~r~~~~--------y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~--gl~~~~~~f~~~~l~l~l~~~~ 667 (1449)
+...+ .+||..+. -++.+|++++.+.++...++..++..++.+..- ++. +...+...++++++..++
T Consensus 1697 fv~~~--V~ER~skaK~lQ~vSGv~~~~YWls~fl~D~~~y~i~~~~~i~i~~~f~~~~~~-~~~~l~~~~lll~lyG~a 1773 (2272)
T TIGR01257 1697 FVLYL--IQERVNKAKHLQFISGVSPTTYWLTNFLWDIMNYAVSAGLVVGIFIGFQKKAYT-SPENLPALVALLMLYGWA 1773 (2272)
T ss_pred Hheee--ehHHhhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhc-CcchHHHHHHHHHHHHHH
Confidence 00000 12222221 256789999999998888777766665554321 222 223444445555666666
Q ss_pred HHHHHHHHHHhhcCHHHHHHHHHHHH---HHHHHhhhccc----c---CCChhHHHHHHHhHcHHHHHHHHH---HHHhh
Q 000517 668 SISMFRFMASVFQTEFAAMTAGSVVI---LFVFLFGGFVI----S---RPSMPAWLKWGFWISPVTYGEIGL---SVNEF 734 (1449)
Q Consensus 668 ~~sl~~~i~a~~~~~~~a~~~~~~~~---l~~~l~~Gf~i----~---~~~ip~~~~W~~~isp~~y~~~al---~~nef 734 (1449)
+..+..+++-++.+...|.....++. .+...+..+++ + ...+...+.|++.+.|..---.++ ..++.
T Consensus 1774 ~ip~tYl~SflF~~~~~A~~~~~~in~~~G~~~~i~~~il~~~~~~~~~~~~~~~l~~if~i~P~f~lg~gl~~l~~~~~ 1853 (2272)
T TIGR01257 1774 VIPMMYPASFLFDVPSTAYVALSCANLFIGINSSAITFVLELFENNRTLLRFNAMLRKLLIVFPHFCLGRGLIDLALSQA 1853 (2272)
T ss_pred HHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHeeCchhhhHHHHHHHHHhHH
Confidence 66666667766666655543322111 11111111211 1 122346788888887754322222 22221
Q ss_pred cCCcccccCCCCccchhhhhccCCcccccchhHHHHH----HHHHHHHHHHHHHHHHHHhccccCCCccccchhhhhhhc
Q 000517 735 LAPRWQKMLPTNTTIGQEILESRGLNFDGFIFWISLG----ALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQ 810 (1449)
Q Consensus 735 ~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~----~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~~~~~ 810 (1449)
....+. ..|... ....|-|-..| .++...++|.++ .+.+.+...... .. ...
T Consensus 1854 ~~~~~~-------~~~~~~-------~~~~~~~~~~g~~ll~m~~~~iv~flL-l~~ie~~~~~~~--~~-------~~~ 1909 (2272)
T TIGR01257 1854 VTDVYA-------QFGEEH-------SANPFQWDLIGKNLVAMAVEGVVYFLL-TLLIQHHFFLSR--WI-------AEP 1909 (2272)
T ss_pred HHHHHH-------hhcccc-------cCCccchhhccHHHHHHHHHHHHHHHH-HHHHHhhhhhhh--hc-------ccc
Confidence 100000 000000 00112222111 111111111111 111111100000 00 000
Q ss_pred ccccCCCCCCcccCCCCCCCCCcccccCCccc--cCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCe
Q 000517 811 ESEDSSYGEPVKENSRSTPMTNKESYKGRMVL--PFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGV 888 (1449)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge 888 (1449)
.. .+...+. . ....++ ..+. ....-.+..+|++..++ .+++.+|+|||+.|++||
T Consensus 1910 ~~-----~~~~~eD--~----DV~~Er-~rV~~~~~~~~~L~v~nLsK~Y~-----------~~~~~aL~~ISf~I~~GE 1966 (2272)
T TIGR01257 1910 AK-----EPIFDED--D----DVAEER-QRIISGGNKTDILRLNELTKVYS-----------GTSSPAVDRLCVGVRPGE 1966 (2272)
T ss_pred Cc-----CcCCCch--h----HHHHHH-HHHhccCCCCceEEEEEEEEEEC-----------CCCceEEEeeEEEEcCCc
Confidence 00 0000000 0 000000 0000 00112367777775542 112569999999999999
Q ss_pred EEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCC
Q 000517 889 LTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPE 966 (1449)
Q Consensus 889 ~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~ 966 (1449)
++||+||||||||||+++|+|...+ .+|+|.++|++... ...++.+|||+|++.+++.+||+|++.+.+.++.
T Consensus 1967 i~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g--- 2041 (2272)
T TIGR01257 1967 CFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSILTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG--- 2041 (2272)
T ss_pred EEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEECcchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---
Confidence 9999999999999999999998765 58999999987632 2345679999999999999999999998777653
Q ss_pred CChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHH
Q 000517 967 INSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNI 1046 (1449)
Q Consensus 967 ~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l 1046 (1449)
.+.++.++.++++++.++|.+.+|+.++ .|||||||||+||+||+.+|+||||||||+|||+.+++.+++.|+++
T Consensus 2042 ~~~~~~~~~v~~lLe~lgL~~~~dk~~~-----~LSGGqKqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l 2116 (2272)
T TIGR01257 2042 VPAEEIEKVANWSIQSLGLSLYADRLAG-----TYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSI 2116 (2272)
T ss_pred CCHHHHHHHHHHHHHHcCCHHHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHH
Confidence 2334445678899999999998888865 79999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCCChhHHHHHH
Q 000517 1047 VNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKHSSQVIEYF 1097 (1449)
Q Consensus 1047 ~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~~~~~~~~~f 1097 (1449)
+++|+|||+|||+++ ++...||++++|. +|+++..|++ +++.+.|
T Consensus 2117 ~~~g~TIILtTH~me-e~e~lcDrV~IL~-~G~i~~~Gs~----q~Lk~~~ 2161 (2272)
T TIGR01257 2117 IREGRAVVLTSHSME-ECEALCTRLAIMV-KGAFQCLGTI----QHLKSKF 2161 (2272)
T ss_pred HhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCH----HHHHHHh
Confidence 878999999999986 6778899999998 5899999986 4454444
No 15
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.9e-68 Score=689.30 Aligned_cols=735 Identities=22% Similarity=0.281 Sum_probs=424.6
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCCCHH
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTVR 263 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 263 (1449)
.+.|+|||++|++|+++||+||.|||||+||.+|.|+++.. +|+|.++| .++||||+++. .+.|||
T Consensus 534 ~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pWI-~ngTvr 599 (1381)
T KOG0054|consen 534 EPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPWI-QNGTVR 599 (1381)
T ss_pred cccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccHh-hCCcHH
Confidence 34899999999999999999999999999999999999875 99999998 58999998875 557999
Q ss_pred HHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccC
Q 000517 264 ETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGI 343 (1449)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGl 343 (1449)
|||.|+.. .|.++|.+++.+|++++|... |+.+..|.||+.. -.|
T Consensus 600 eNILFG~~--------------------------~d~~rY~~Vi~aC~L~~Dle~--------Lp~GD~TeIGErG-inL 644 (1381)
T KOG0054|consen 600 ENILFGSP--------------------------YDEERYDKVIKACALKKDLEI--------LPFGDLTEIGERG-INL 644 (1381)
T ss_pred HhhhcCcc--------------------------ccHHHHHHHHHHccCHhHHhh--------cCCCCcceecCCc-cCC
Confidence 99999742 356789999999999887665 8899999999732 239
Q ss_pred ChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHH-HHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeE
Q 000517 344 SGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIA-CIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKI 422 (1449)
Q Consensus 344 SGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~-~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~i 422 (1449)
|||||||+++|||+++++||++||+|.|++|+++..+|++ |++.+. .++|+|+..|| -+....+|.|++|++|+|
T Consensus 645 SGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L--~~KT~ILVTHq--l~~L~~ad~Iivl~~G~I 720 (1381)
T KOG0054|consen 645 SGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLL--RGKTVILVTHQ--LQFLPHADQIIVLKDGKI 720 (1381)
T ss_pred cHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh--cCCEEEEEeCc--hhhhhhCCEEEEecCCeE
Confidence 9999999999999999999999999999999999999996 776654 46898888774 578899999999999999
Q ss_pred EEecChhhHHH---HHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHH-HHHHH----hcChhhHhHH
Q 000517 423 VYHGPQDHVLA---FFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDM-FSKKF----KESPLVKKLD 494 (1449)
Q Consensus 423 v~~G~~~~~~~---~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~s~~~~~~~ 494 (1449)
+..|+++|+.+ +|+++.-+ +......+ ...++ .+.+......+. ..+.- ++....+..+
T Consensus 721 ~~~Gty~el~~~~~~~~~l~~~-~~~~~~~~-----~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 787 (1381)
T KOG0054|consen 721 VESGTYEELLKSGGDFAELAHE-EESEQEEE-----ASEKD-------LESGESSRESESRSLESLSSEEEKSKDEKEEE 787 (1381)
T ss_pred ecccCHHHHHhcchhHHHHhhc-cchhhccc-----ccccc-------ccccccccchhhhhhhhhcccccccccccchh
Confidence 99999999984 34333100 00000000 00000 000000000000 00000 0000000000
Q ss_pred HHhcCcccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHH-HHHHHHHH-HHHHHHHHHhcccCCcc---c
Q 000517 495 EELLVPYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYV-FKTTQLIM-LATMAMTVFLRTRMEID---V 569 (1449)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~-~~~~~~~i-~ali~g~vf~~~~~~~~---~ 569 (1449)
.++.. .+....+.+..+.| +.++++... ..... +-+.+... +..+.+..|+....+.. .
T Consensus 788 ~~~~~---~ee~~~G~v~~~vY----~~Y~~a~~g---------~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~ 851 (1381)
T KOG0054|consen 788 DKLVQ---EEERETGKVSWSVY----KKYIKAAGG---------FLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNG 851 (1381)
T ss_pred hHHHH---HHHHhcCEeeHHHH----HHHHHhccc---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 00000 00001111222222 334433110 00000 01111111 11111222222111111 0
Q ss_pred ---cchhhhhH----HHHHHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHH------------------------
Q 000517 570 ---FHGNYYMG----SLYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAY------------------------ 618 (1449)
Q Consensus 570 ---~~~~~~~g----~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay------------------------ 618 (1449)
.+...|.+ ..+...+..++.++......+.....++.+...+..++..+
T Consensus 852 ~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~ 931 (1381)
T KOG0054|consen 852 TTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVL 931 (1381)
T ss_pred ccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHh
Confidence 11111221 11111111111221111111111111111111111111100
Q ss_pred -----------------HHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHHHHHHH----HHHHHHHHHHHH----HHH
Q 000517 619 -----------------AIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQF----ILLFASHFTSIS----MFR 673 (1449)
Q Consensus 619 -----------------~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~----l~l~l~~~~~~s----l~~ 673 (1449)
.+..+..-.|+.++..+...++.|++-.+.....|-++.+ ...+..|+...- ..|
T Consensus 932 Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIR 1011 (1381)
T KOG0054|consen 932 LPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIR 1011 (1381)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceee
Confidence 0111111234444444333444443332222222222211 111222221100 000
Q ss_pred -------HHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHH-HHHhHcHHHHHHHHHHHHhhcCCcccccCCC
Q 000517 674 -------FMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLK-WGFWISPVTYGEIGLSVNEFLAPRWQKMLPT 745 (1449)
Q Consensus 674 -------~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~-W~~~isp~~y~~~al~~nef~~~~~~~~~~~ 745 (1449)
|+...... .-.. .-..+.+. ....|+. |.-.++-+.-...++..--....
T Consensus 1012 Af~~~~rf~~~~~~~-----~D~~--~~~~f~~~-------~a~RWla~Rle~ig~~~v~~~al~~vl~~~~-------- 1069 (1381)
T KOG0054|consen 1012 AFGKEERFIQENDEL-----IDEN--SRAFFLSI-------SANRWLAVRLELLGNLVVLIAALFAVLLPSG-------- 1069 (1381)
T ss_pred eccccHHHHHHHHHH-----hhhh--HHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHccCC--------
Confidence 00000000 0000 00000000 0011110 11112111111112111100000
Q ss_pred CccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhc--cccCCCccccchhhhhhhcccccCCCCCCccc
Q 000517 746 NTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFL--KSSGSSRVMISHEKLAKMQESEDSSYGEPVKE 823 (1449)
Q Consensus 746 ~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~ 823 (1449)
... ..++|+++.|.+..+-.+.+. .....++.++|+||+.++.....+.+....
T Consensus 1070 ------------~~~----------~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~-- 1125 (1381)
T KOG0054|consen 1070 ------------LIS----------PGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIE-- 1125 (1381)
T ss_pred ------------CCC----------cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCc--
Confidence 000 134555555555444444333 344557788999999987654322110000
Q ss_pred CCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHH
Q 000517 824 NSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTL 903 (1449)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTL 903 (1449)
. . .+++.||.++ .++|+|++.++.. +-..+|||||++|+|||++||+|++|||||||
T Consensus 1126 ~--~---~pp~~WP~~G-------~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL 1182 (1381)
T KOG0054|consen 1126 E--S---RPPPSWPSKG-------EIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSL 1182 (1381)
T ss_pred C--C---CCCCCCCCCC-------eEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHH
Confidence 0 1 1345576655 4666665544321 22359999999999999999999999999999
Q ss_pred HhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 000517 904 MDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVL 980 (1449)
Q Consensus 904 l~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l 980 (1449)
+++|.+...+ .+|+|.|||.++.+ .++|++++.+||||.+|. -|+|.|| |+..+..++.++++|
T Consensus 1183 ~~aLFRl~e~--~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFs-GTvR~NL----------DPf~e~sD~~IW~AL 1249 (1381)
T KOG0054|consen 1183 ILALFRLVEP--AEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFS-GTVRFNL----------DPFDEYSDDEIWEAL 1249 (1381)
T ss_pred HHHHHHhcCc--cCCeEEEcCeecccccHHHHHhcCeeeCCCCceec-Ccccccc----------CcccccCHHHHHHHH
Confidence 9999987654 58999999998754 468889999999999875 5888886 455666778899999
Q ss_pred HHcCCcccc-------cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEE
Q 000517 981 ETIELDAIK-------DSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTI 1053 (1449)
Q Consensus 981 ~~l~L~~~~-------~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tv 1053 (1449)
|..+|.+.. |+.|...| .++|.||||.+|+||||+++++||+|||+|+++|++|...|+++||+-. +++||
T Consensus 1250 e~~~Lk~~v~~~p~~Ld~~v~egG-~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F-~dcTV 1327 (1381)
T KOG0054|consen 1250 ERCQLKDVVSSLPGGLDSEVSEGG-ENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEF-KDCTV 1327 (1381)
T ss_pred HHhChHHHHhhCCcCCCceecCCC-ccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHh-cCCeE
Confidence 999886643 44454444 5699999999999999999999999999999999999999999999965 58999
Q ss_pred EEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1054 VCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1054 i~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
|++.|+.+ ....+|+|++|+ .|+++++|++.
T Consensus 1328 ltIAHRl~--TVmd~DrVlVld-~G~v~EfdsP~ 1358 (1381)
T KOG0054|consen 1328 LTIAHRLN--TVMDSDRVLVLD-AGRVVEFDSPA 1358 (1381)
T ss_pred EEEeeccc--hhhhcCeEEEee-CCeEeecCChH
Confidence 99999976 345689999998 58999999984
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.3e-65 Score=701.22 Aligned_cols=211 Identities=22% Similarity=0.308 Sum_probs=178.3
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++|+|++++++. +...+|+|||++|+|||++||+|+||||||||+++|.|...+ .+|+|.|||.++
T Consensus 1237 ~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p--~~G~I~IDG~dI 1303 (1622)
T PLN03130 1237 SIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVEL--ERGRILIDGCDI 1303 (1622)
T ss_pred cEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCEec
Confidence 5889999887632 123599999999999999999999999999999999997665 589999999986
Q ss_pred cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000517 928 VQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-------IKDSLVGIPG 997 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 997 (1449)
.+ ..+|+.++||||++.+|.. |++|||.+.. . ..++.++++++..++.+ -.|+.+|..|
T Consensus 1304 ~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~----~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G 1372 (1622)
T PLN03130 1304 SKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------E----HNDADLWESLERAHLKDVIRRNSLGLDAEVSEAG 1372 (1622)
T ss_pred ccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------C----CCHHHHHHHHHHcCcHHHHHhCccccCccccCCC
Confidence 43 5678899999999998864 9999996531 1 12355777888777643 4577787655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
. .||||||||++|||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....+|+|++|+ +
T Consensus 1373 ~-nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd-~ 1447 (1622)
T PLN03130 1373 E-NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLD-A 1447 (1622)
T ss_pred C-CCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEE-C
Confidence 4 699999999999999999999999999999999999999999999975 5899999999975 456799999998 5
Q ss_pred cEEEEecCCC
Q 000517 1078 GRIIYCGPLG 1087 (1449)
Q Consensus 1078 G~~v~~G~~~ 1087 (1449)
|++++.|++.
T Consensus 1448 G~IvE~Gt~~ 1457 (1622)
T PLN03130 1448 GRVVEFDTPE 1457 (1622)
T ss_pred CEEEEeCCHH
Confidence 9999999874
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.2e-64 Score=695.32 Aligned_cols=210 Identities=20% Similarity=0.289 Sum_probs=177.6
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++|+|++++++. +...+|+|+|++|+|||.+||+|+||||||||+++|.|..++ .+|+|.+||.++
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEL--EKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcC--CCceEEECCEEh
Confidence 5889999887731 123599999999999999999999999999999999998765 589999999986
Q ss_pred cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000517 928 VQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-------IKDSLVGIPG 997 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 997 (1449)
.+ ..+|+.++||||++.+++ -|++|||.+.. + ..++.++++++..++.+ -.|+.+|..|
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~-gTIr~NL~~~~------~----~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G 1369 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFS-GTVRFNIDPFS------E----HNDADLWEALERAHIKDVIDRNPFGLDAEVSEGG 1369 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeC-ccHHHHcCCCC------C----CCHHHHHHHHHHcCCHHHHHhCcCCCCceecCCC
Confidence 43 567889999999999886 49999996421 1 12345777888877754 3467777655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
. +||||||||++|||||+++|+||+||||||+||+.+.+.|++.|++.. +++|+|+++|+++ ....+|++++|+ +
T Consensus 1370 ~-~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~-~ 1444 (1495)
T PLN03232 1370 E-NFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLS-S 1444 (1495)
T ss_pred C-CCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEE-C
Confidence 4 699999999999999999999999999999999999999999999874 5899999999975 456799999998 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|++++.|++
T Consensus 1445 G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 GQVLEYDSP 1453 (1495)
T ss_pred CEEEEECCH
Confidence 899999986
No 18
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3e-64 Score=599.48 Aligned_cols=474 Identities=26% Similarity=0.341 Sum_probs=357.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-CCeeeEEEECCccCCCCCC-------CceEEEEcCCC-
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPS-LKVTGEVSYNGYKLEEFVP-------PKTSAYISQND- 254 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 254 (1449)
..+++||||++.+||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++||+|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 46999999999999999999999999999999999999886 4568999999997654432 36799999996
Q ss_pred -ccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccc
Q 000517 255 -LHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADT 333 (1449)
Q Consensus 255 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 333 (1449)
.+-|-+||.+.+.-..+..+...+ .+ ...++.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~~---------~e------------------------a~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGSR---------AE------------------------ARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhccccH---------HH------------------------HHHHHHHHHHHcCCCChhhh
Confidence 466779999988776665432211 00 11235678999999987655
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
+.+.+.|||||||||.||+||+.+|++|++|||||+||+.++.+|++.|+++.++.| +.++.++|+..-+.++||+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g-~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELG-MAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcC-cEEEEEcCCHHHHHHhcCe
Confidence 445667999999999999999999999999999999999999999999999987655 5555677888899999999
Q ss_pred EEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhHhH
Q 000517 414 IILMAEGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKL 493 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 493 (1449)
|++|.+|++++.|+++++.+- | .+||.. .+
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p-------------------------~hpYT~-----------------~L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------P-------------------------QHPYTR-----------------GL 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------c-------------------------CCcccH-----------------HH
Confidence 999999999999999988641 1 111110 00
Q ss_pred HHHhcCcccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccchh
Q 000517 494 DEELLVPYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGN 573 (1449)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~ 573 (1449)
.+. .|.....
T Consensus 255 l~a--~p~~~~~-------------------------------------------------------------------- 264 (539)
T COG1123 255 LAA--VPRLGDE-------------------------------------------------------------------- 264 (539)
T ss_pred Hhh--CCCcccc--------------------------------------------------------------------
Confidence 000 0000000
Q ss_pred hhhHHHHHHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHH
Q 000517 574 YYMGSLYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWR 653 (1449)
Q Consensus 574 ~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~ 653 (1449)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHHHh
Q 000517 654 FFRQFILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNE 733 (1449)
Q Consensus 654 f~~~~l~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ne 733 (1449)
T Consensus 265 -------------------------------------------------------------------------------- 264 (539)
T COG1123 265 -------------------------------------------------------------------------------- 264 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCCcccccCCCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhhhhhhcccc
Q 000517 734 FLAPRWQKMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQESE 813 (1449)
Q Consensus 734 f~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~~~~~~~~ 813 (1449)
..
T Consensus 265 ------~~------------------------------------------------------------------------ 266 (539)
T COG1123 265 ------KI------------------------------------------------------------------------ 266 (539)
T ss_pred ------cc------------------------------------------------------------------------
Confidence 00
Q ss_pred cCCCCCCcccCCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEe
Q 000517 814 DSSYGEPVKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALM 893 (1449)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 893 (1449)
.... . . ... .. ..-++.+|++-++..+..+. ....+...+++||||++++||++||+
T Consensus 267 ---~~~~---~--~----~~~--~~-------~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~~GE~lglV 323 (539)
T COG1123 267 ---IRLP---R--R----GPL--RA-------EPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLREGETLGLV 323 (539)
T ss_pred ---cccc---c--c----ccc--cc-------CceeEeeeeeeeeccccccc--cccccceeeeeeeeeEecCCCEEEEE
Confidence 0000 0 0 000 00 00123333332222211000 00123456899999999999999999
Q ss_pred cCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC--c---cccccceEEEEccCC--CCCCCCCHHHHHHHHHHhccCCC
Q 000517 894 GVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK--V---QETFARVSGYCEQTD--IHSPNITVEESVIFSAWLRLAPE 966 (1449)
Q Consensus 894 G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~--~---~~~~~~~~gyv~Q~d--~~~~~lTv~e~l~f~~~lr~~~~ 966 (1449)
|+||||||||.++|+|...+ .+|+|.++|.+. . ....++.+-+++|++ .+.|.+||++.+.-.......
T Consensus 324 GeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~-- 399 (539)
T COG1123 324 GESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGG-- 399 (539)
T ss_pred CCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcc--
Confidence 99999999999999998776 589999999762 1 123445566666665 678999999999876544332
Q ss_pred CChHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 000517 967 INSKTKAEFVNEVLETIELDA-IKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKN 1045 (1449)
Q Consensus 967 ~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~ 1045 (1449)
....++++++.++++.++|.. ..++. +.+||||||||++|||||+.+|++|++|||||.||+..+..|.++|++
T Consensus 400 ~~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~ 474 (539)
T COG1123 400 GSGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKD 474 (539)
T ss_pred cchHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHH
Confidence 224566778999999999986 45555 358999999999999999999999999999999999999999999999
Q ss_pred HHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1046 IVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1046 l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
+.++ |.|.|++|||.+. +...|||+++|. .|++|+.||.
T Consensus 475 lq~e~g~t~lfISHDl~v-V~~i~drv~vm~-~G~iVE~G~~ 514 (539)
T COG1123 475 LQEELGLTYLFISHDLAV-VRYIADRVAVMY-DGRIVEEGPT 514 (539)
T ss_pred HHHHhCCEEEEEeCCHHH-HHhhCceEEEEE-CCeEEEeCCH
Confidence 9765 9999999999874 778899999998 5999999975
No 19
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=7e-63 Score=670.70 Aligned_cols=216 Identities=22% Similarity=0.342 Sum_probs=178.5
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC-------------
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG------------- 914 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~------------- 914 (1449)
.++|+||+|+++.. .+..+|+|+||+|+||+++||+||||||||||+++|.|...+.
T Consensus 1165 ~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~ 1234 (1466)
T PTZ00265 1165 KIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTN 1234 (1466)
T ss_pred eEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccc
Confidence 58999999987532 1246999999999999999999999999999999999976641
Q ss_pred ---------------------------------------eeEEEEEEcCccCcc---ccccceEEEEccCCCCCCCCCHH
Q 000517 915 ---------------------------------------YVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSPNITVE 952 (1449)
Q Consensus 915 ---------------------------------------~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~ 952 (1449)
+.+|+|.+||.++.+ ..+|+.+|||+|++.+| +.|++
T Consensus 1235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIr 1313 (1466)
T PTZ00265 1235 DMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIY 1313 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHH
Confidence 148999999998643 56788999999999887 57999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHHHcCC-------cccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000517 953 ESVIFSAWLRLAPEINSKTKAEFVNEVLETIEL-------DAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMD 1025 (1449)
Q Consensus 953 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L-------~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLD 1025 (1449)
|||.|+. ++.+ ++.++++++..++ .+-.||.+|..|. .||||||||++|||||+++|+||+||
T Consensus 1314 eNI~~g~-----~~at----~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~-~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1314 ENIKFGK-----EDAT----REDVKRACKFAAIDEFIESLPNKYDTNVGPYGK-SLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred HHHhcCC-----CCCC----HHHHHHHHHHcCCHHHHHhCccccCCccCCCCC-cCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 9998851 1222 2345666666554 4456899997654 59999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHH-hcCCEEEEEecCccHHHHHhcCeEEEEecC---cEE-EEecCC
Q 000517 1026 EPTTGLDARAAAIVMRAVKNIV-NTGRTIVCTIHQPSIDIFEAFDELILLKTG---GRI-IYCGPL 1086 (1449)
Q Consensus 1026 EPTsgLD~~~~~~i~~~l~~l~-~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g---G~~-v~~G~~ 1086 (1449)
||||+||+.+.+.|++.|+++. .+++|+|+++|+++ ..+.+|++++|+++ |++ ++.|+-
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 9999999999999999999986 36899999999975 56789999999852 774 488874
No 20
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-63 Score=623.14 Aligned_cols=458 Identities=22% Similarity=0.322 Sum_probs=348.4
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDP--SLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIA 258 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 258 (1449)
++|+|+|+++++|++++|+|||||||||||++|+|.++| + +|+|.++|+++..... ++.++||+|++.+++
T Consensus 19 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 95 (506)
T PRK13549 19 KALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTY---EGEIIFEGEELQASNIRDTERAGIAIIHQELALVK 95 (506)
T ss_pred EeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHHCCeEEEEeccccCC
Confidence 599999999999999999999999999999999999986 5 8999999998754322 356999999988899
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
.+||+||+.++......+.. ..++ ....++++++.+||++..++.+++
T Consensus 96 ~~tv~e~l~~~~~~~~~~~~-------~~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~- 143 (506)
T PRK13549 96 ELSVLENIFLGNEITPGGIM-------DYDA------------------------MYLRAQKLLAQLKLDINPATPVGN- 143 (506)
T ss_pred CCcHHHHhhhcccccccCCc-------CHHH------------------------HHHHHHHHHHHcCCCCCcccchhh-
Confidence 99999999886432110000 0000 011346689999998888888876
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++ .+.|+|++ +|+..++.++||+|++|+
T Consensus 144 ----LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~~~tvi~~-tH~~~~~~~~~d~v~~l~ 217 (506)
T PRK13549 144 ----LGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-HGIACIYI-SHKLNEVKAISDTICVIR 217 (506)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEE-eCcHHHHHHhcCEEEEEE
Confidence 999999999999999999999999999999999999999999999865 46676665 566778889999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhHhHHHHhc
Q 000517 419 EGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDEELL 498 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 498 (1449)
+|++++.|+.+++.. .+ ..+.
T Consensus 218 ~G~i~~~~~~~~~~~---------------~~-----------------------------~~~~--------------- 238 (506)
T PRK13549 218 DGRHIGTRPAAGMTE---------------DD-----------------------------IITM--------------- 238 (506)
T ss_pred CCEEeeecccccCCH---------------HH-----------------------------HHHH---------------
Confidence 999998876432200 00 0000
Q ss_pred CcccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhhhHH
Q 000517 499 VPYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYYMGS 578 (1449)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~g~ 578 (1449)
+. .
T Consensus 239 -------------------------------------------------------------~~--~-------------- 241 (506)
T PRK13549 239 -------------------------------------------------------------MV--G-------------- 241 (506)
T ss_pred -------------------------------------------------------------hh--C--------------
Confidence 00 0
Q ss_pred HHHHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHHHHHHH
Q 000517 579 LYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQF 658 (1449)
Q Consensus 579 lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~ 658 (1449)
-.
T Consensus 242 --------------------------------------------------------------------~~---------- 243 (506)
T PRK13549 242 --------------------------------------------------------------------RE---------- 243 (506)
T ss_pred --------------------------------------------------------------------cC----------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHHHhhcCCc
Q 000517 659 ILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFLAPR 738 (1449)
Q Consensus 659 l~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 738 (1449)
.+.
T Consensus 244 --------------------------------------------------~~~--------------------------- 246 (506)
T PRK13549 244 --------------------------------------------------LTA--------------------------- 246 (506)
T ss_pred --------------------------------------------------ccc---------------------------
Confidence 000
Q ss_pred ccccCCCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhhhhhhcccccCCCC
Q 000517 739 WQKMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQESEDSSYG 818 (1449)
Q Consensus 739 ~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 818 (1449)
.. + .
T Consensus 247 ---------------------------------------------------~~-~--~---------------------- 250 (506)
T PRK13549 247 ---------------------------------------------------LY-P--R---------------------- 250 (506)
T ss_pred ---------------------------------------------------cc-c--c----------------------
Confidence 00 0 0
Q ss_pred CCcccCCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCC
Q 000517 819 EPVKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGA 898 (1449)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGa 898 (1449)
. . . .. + ...+.++|++++++. .+++.+|+|+||+|++||++||+|||||
T Consensus 251 -~---~--~---~~-----~-------~~~l~~~~l~~~~~~----------~~~~~vl~~vsl~i~~Ge~~~l~G~NGs 299 (506)
T PRK13549 251 -E---P--H---TI-----G-------EVILEVRNLTAWDPV----------NPHIKRVDDVSFSLRRGEILGIAGLVGA 299 (506)
T ss_pred -c---c--c---CC-----C-------CceEEEecCcccccc----------ccccccccceeeEEcCCcEEEEeCCCCC
Confidence 0 0 0 00 0 002455666543310 0124589999999999999999999999
Q ss_pred ChhHHHhhhcCCCCCCeeEEEEEEcCccCcc----ccccceEEEEccCC---CCCCCCCHHHHHHHHHHhccCC--CCCh
Q 000517 899 GKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ----ETFARVSGYCEQTD---IHSPNITVEESVIFSAWLRLAP--EINS 969 (1449)
Q Consensus 899 GKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d---~~~~~lTv~e~l~f~~~lr~~~--~~~~ 969 (1449)
|||||+++|+|...+ +.+|+|.++|.+... ...++.+||++|++ .+++.+||.||+.+........ ....
T Consensus 300 GKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~ 378 (506)
T PRK13549 300 GRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDD 378 (506)
T ss_pred CHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccCh
Confidence 999999999997642 147999999976532 12345689999985 4678899999998753211110 0122
Q ss_pred HHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh
Q 000517 970 KTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVN 1048 (1449)
Q Consensus 970 ~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~ 1048 (1449)
+...+.++++++.++|. +..++.++ .|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+++++
T Consensus 379 ~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~ 453 (506)
T PRK13549 379 AAELKTILESIQRLKVKTASPELAIA-----RLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQ 453 (506)
T ss_pred HHHHHHHHHHHHhcCccCCCcccccc-----cCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHH
Confidence 33446688999999996 56677654 7999999999999999999999999999999999999999999999988
Q ss_pred cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCCC
Q 000517 1049 TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKH 1089 (1449)
Q Consensus 1049 ~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~~ 1089 (1449)
+|+|||++||+++ ++.+.+|++++|. +|+++..|+.++.
T Consensus 454 ~g~tvi~~sHd~~-~~~~~~d~v~~l~-~G~i~~~~~~~~~ 492 (506)
T PRK13549 454 QGVAIIVISSELP-EVLGLSDRVLVMH-EGKLKGDLINHNL 492 (506)
T ss_pred CCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEEeccccC
Confidence 8999999999986 5778899999998 5899999987654
No 21
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.2e-63 Score=621.17 Aligned_cols=450 Identities=21% Similarity=0.329 Sum_probs=346.2
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 260 (1449)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (501)
T PRK10762 18 KALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQL 94 (501)
T ss_pred EEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCCC
Confidence 5899999999999999999999999999999999999997 9999999988753221 34699999999899999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||+||+.++......... ....+ ....++++++.+||++..|..+++
T Consensus 95 tv~e~l~~~~~~~~~~~~------~~~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~--- 141 (501)
T PRK10762 95 TIAENIFLGREFVNRFGR------IDWKK------------------------MYAEADKLLARLNLRFSSDKLVGE--- 141 (501)
T ss_pred cHHHHhhhccccccccCc------cCHHH------------------------HHHHHHHHHHHcCCCCCccCchhh---
Confidence 999999986432110000 00000 011346689999999888888876
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+ .+.|+|++ +|+.+++.++||+|++|++|
T Consensus 142 --LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~~~tvii~-sHd~~~~~~~~d~i~~l~~G 217 (501)
T PRK10762 142 --LSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-QGRGIVYI-SHRLKEIFEICDDVTVFRDG 217 (501)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-CCCEEEEE-eCCHHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999865 46666665 56677888999999999999
Q ss_pred eEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhHhHHHHhcCc
Q 000517 421 KIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDEELLVP 500 (1449)
Q Consensus 421 ~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 500 (1449)
+++..|+.+++.. ++..+.
T Consensus 218 ~i~~~~~~~~~~~--------------------------------------------~~~~~~----------------- 236 (501)
T PRK10762 218 QFIAEREVADLTE--------------------------------------------DSLIEM----------------- 236 (501)
T ss_pred EEEEecCcCcCCH--------------------------------------------HHHHHH-----------------
Confidence 9998775432100 000000
Q ss_pred ccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhhhHHHH
Q 000517 501 YDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYYMGSLY 580 (1449)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~g~lf 580 (1449)
+. .
T Consensus 237 -----------------------------------------------------------~~--~---------------- 239 (501)
T PRK10762 237 -----------------------------------------------------------MV--G---------------- 239 (501)
T ss_pred -----------------------------------------------------------hc--C----------------
Confidence 00 0
Q ss_pred HHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHH
Q 000517 581 FSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQFIL 660 (1449)
Q Consensus 581 f~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l~ 660 (1449)
.
T Consensus 240 ------------------------------------------------------------------~------------- 240 (501)
T PRK10762 240 ------------------------------------------------------------------R------------- 240 (501)
T ss_pred ------------------------------------------------------------------C-------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHHHhhcCCccc
Q 000517 661 LFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFLAPRWQ 740 (1449)
Q Consensus 661 l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~ 740 (1449)
..
T Consensus 241 -----------------------------------------------~~------------------------------- 242 (501)
T PRK10762 241 -----------------------------------------------KL------------------------------- 242 (501)
T ss_pred -----------------------------------------------Cc-------------------------------
Confidence 00
Q ss_pred ccCCCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhhhhhhcccccCCCCCC
Q 000517 741 KMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQESEDSSYGEP 820 (1449)
Q Consensus 741 ~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 820 (1449)
.. . .+
T Consensus 243 ------------------------------------------------------~~-------------------~--~~ 247 (501)
T PRK10762 243 ------------------------------------------------------ED-------------------Q--YP 247 (501)
T ss_pred ------------------------------------------------------cc-------------------c--cc
Confidence 00 0 00
Q ss_pred cccCCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCCh
Q 000517 821 VKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGK 900 (1449)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGK 900 (1449)
. . . .. . .+..+.++|++. .+|+|+||+|++||+++|+|||||||
T Consensus 248 ~--~--~---~~----~-------~~~~l~~~~l~~------------------~~l~~vsl~i~~Ge~~~liG~NGsGK 291 (501)
T PRK10762 248 R--L--D---KA----P-------GEVRLKVDNLSG------------------PGVNDVSFTLRKGEILGVSGLMGAGR 291 (501)
T ss_pred c--c--c---cC----C-------CCcEEEEeCccc------------------CCcccceEEEcCCcEEEEecCCCCCH
Confidence 0 0 0 00 0 001245555541 26999999999999999999999999
Q ss_pred hHHHhhhcCCCCCCeeEEEEEEcCccCcc----ccccceEEEEccCC---CCCCCCCHHHHHHHHHHhccC---CCCChH
Q 000517 901 TTLMDVLAGRKTSGYVEGEIKISGYPKVQ----ETFARVSGYCEQTD---IHSPNITVEESVIFSAWLRLA---PEINSK 970 (1449)
Q Consensus 901 STLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d---~~~~~lTv~e~l~f~~~lr~~---~~~~~~ 970 (1449)
|||+++|+|...+ .+|+|.++|.+... ...++.+||++|++ .+++.+||.|++.+....... .....+
T Consensus 292 STLl~~l~G~~~p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 369 (501)
T PRK10762 292 TELMKVLYGALPR--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHA 369 (501)
T ss_pred HHHHHHHhCCCCC--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHH
Confidence 9999999998655 48999999976532 12345799999995 477889999999875321110 001223
Q ss_pred HHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc
Q 000517 971 TKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT 1049 (1449)
Q Consensus 971 ~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~ 1049 (1449)
..++.++++++.++|. +..++.++ .|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++
T Consensus 370 ~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~ 444 (501)
T PRK10762 370 DEQQAVSDFIRLFNIKTPSMEQAIG-----LLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAE 444 (501)
T ss_pred HHHHHHHHHHHhcCCCCCCccCchh-----hCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHC
Confidence 3446688999999995 56777754 79999999999999999999999999999999999999999999999878
Q ss_pred CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCCC
Q 000517 1050 GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKH 1089 (1449)
Q Consensus 1050 g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~~ 1089 (1449)
|.|||++||++. .+.+.+|++++|. +|+++..|+..+.
T Consensus 445 g~tviivtHd~~-~~~~~~d~v~~l~-~G~i~~~~~~~~~ 482 (501)
T PRK10762 445 GLSIILVSSEMP-EVLGMSDRILVMH-EGRISGEFTREQA 482 (501)
T ss_pred CCEEEEEcCCHH-HHHhhCCEEEEEE-CCEEEEEeccccC
Confidence 999999999986 5778899999998 5899999987653
No 22
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-63 Score=623.36 Aligned_cols=457 Identities=21% Similarity=0.303 Sum_probs=346.3
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 260 (1449)
++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.+
T Consensus 19 ~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 95 (510)
T PRK09700 19 HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDEL 95 (510)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCCC
Confidence 5899999999999999999999999999999999999987 9999999998764332 24699999999889999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||+||+.++...... .... ...... +....++.+++.+||.+..|+.+++
T Consensus 96 tv~e~l~~~~~~~~~--~~~~-~~~~~~------------------------~~~~~~~~~l~~~gl~~~~~~~~~~--- 145 (510)
T PRK09700 96 TVLENLYIGRHLTKK--VCGV-NIIDWR------------------------EMRVRAAMMLLRVGLKVDLDEKVAN--- 145 (510)
T ss_pred cHHHHhhhccccccc--cccc-cccCHH------------------------HHHHHHHHHHHHcCCCCCcccchhh---
Confidence 999999875321000 0000 000000 0012356789999999888888876
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .++|+|++ +|+..++.++||+|++|++|
T Consensus 146 --LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tiiiv-sHd~~~~~~~~d~v~~l~~G 221 (510)
T PRK09700 146 --LSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-EGTAIVYI-SHKLAEIRRICDRYTVMKDG 221 (510)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEE-eCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999976 46676664 56678888999999999999
Q ss_pred eEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhHhHHHHhcCc
Q 000517 421 KIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDEELLVP 500 (1449)
Q Consensus 421 ~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 500 (1449)
++++.|+++++.. . +..+ .
T Consensus 222 ~i~~~g~~~~~~~---------------~-----------------------------~~~~-------------~---- 240 (510)
T PRK09700 222 SSVCSGMVSDVSN---------------D-----------------------------DIVR-------------L---- 240 (510)
T ss_pred EEeeecchhhCCH---------------H-----------------------------HHHH-------------H----
Confidence 9998887543210 0 0000 0
Q ss_pred ccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhhhHHHH
Q 000517 501 YDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYYMGSLY 580 (1449)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~g~lf 580 (1449)
+.....
T Consensus 241 -----------------------------------------------------------~~~~~~--------------- 246 (510)
T PRK09700 241 -----------------------------------------------------------MVGREL--------------- 246 (510)
T ss_pred -----------------------------------------------------------hcCCCc---------------
Confidence 000000
Q ss_pred HHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHH
Q 000517 581 FSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQFIL 660 (1449)
Q Consensus 581 f~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l~ 660 (1449)
.
T Consensus 247 -------------------------------------------------------------------~------------ 247 (510)
T PRK09700 247 -------------------------------------------------------------------Q------------ 247 (510)
T ss_pred -------------------------------------------------------------------c------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHHHhhcCCccc
Q 000517 661 LFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFLAPRWQ 740 (1449)
Q Consensus 661 l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~ 740 (1449)
+ .+
T Consensus 248 --------------------------------------------~---------------------------~~------ 250 (510)
T PRK09700 248 --------------------------------------------N---------------------------RF------ 250 (510)
T ss_pred --------------------------------------------c---------------------------cc------
Confidence 0 00
Q ss_pred ccCCCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhhhhhhcccccCCCCCC
Q 000517 741 KMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQESEDSSYGEP 820 (1449)
Q Consensus 741 ~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 820 (1449)
. .. .+
T Consensus 251 -------------------------------------------------------~------------------~~--~~ 255 (510)
T PRK09700 251 -------------------------------------------------------N------------------AM--KE 255 (510)
T ss_pred -------------------------------------------------------c------------------cc--cc
Confidence 0 00 00
Q ss_pred cccCCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCCh
Q 000517 821 VKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGK 900 (1449)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGK 900 (1449)
. . . .. .+ +..+.++|++... ..+|+|+|++|++||+++|+|||||||
T Consensus 256 ~--~--~---~~----~~-------~~~l~~~~l~~~~---------------~~~l~~isl~i~~Ge~~~l~G~NGsGK 302 (510)
T PRK09700 256 N--V--S---NL----AH-------ETVFEVRNVTSRD---------------RKKVRDISFSVCRGEILGFAGLVGSGR 302 (510)
T ss_pred c--c--c---cC----CC-------CcEEEEeCccccC---------------CCcccceeEEEcCCcEEEEECCCCCCH
Confidence 0 0 0 00 00 0135666665321 128999999999999999999999999
Q ss_pred hHHHhhhcCCCCCCeeEEEEEEcCccCcc----ccccceEEEEccC---CCCCCCCCHHHHHHHHHHhc---cCC--C-C
Q 000517 901 TTLMDVLAGRKTSGYVEGEIKISGYPKVQ----ETFARVSGYCEQT---DIHSPNITVEESVIFSAWLR---LAP--E-I 967 (1449)
Q Consensus 901 STLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~---d~~~~~lTv~e~l~f~~~lr---~~~--~-~ 967 (1449)
|||+++|+|...+ .+|+|.++|.+... ...++.+||++|+ ..+++.+||.||+.+....+ ... . .
T Consensus 303 STLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 380 (510)
T PRK09700 303 TELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLF 380 (510)
T ss_pred HHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhcccccccccccccccccc
Confidence 9999999998654 48999999976532 1234578999998 45788999999998753211 000 0 1
Q ss_pred ChHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHH
Q 000517 968 NSKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNI 1046 (1449)
Q Consensus 968 ~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l 1046 (1449)
.....++.++++++.++|. +..++.++ .|||||||||+|||+|+.+|+||||||||+|||+.++..+++.|+++
T Consensus 381 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l 455 (510)
T PRK09700 381 HEVDEQRTAENQRELLALKCHSVNQNIT-----ELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQL 455 (510)
T ss_pred ChHHHHHHHHHHHHhcCCCCCCccCccc-----cCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHH
Confidence 1223335678999999996 67777764 79999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1047 VNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1047 ~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
+++|.|||++|||+. .+.+.+|++++|. +|+++..++.
T Consensus 456 ~~~g~tvi~vsHd~~-~~~~~~d~i~~l~-~G~i~~~~~~ 493 (510)
T PRK09700 456 ADDGKVILMVSSELP-EIITVCDRIAVFC-EGRLTQILTN 493 (510)
T ss_pred HHCCCEEEEEcCCHH-HHHhhCCEEEEEE-CCEEEEEecC
Confidence 878999999999986 5778899999997 5899988875
No 23
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=8.4e-62 Score=667.95 Aligned_cols=211 Identities=20% Similarity=0.243 Sum_probs=178.2
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++|+|++++++.. ...+|+|||++|+|||++||+|+||||||||+++|.|..++ .+|+|.|||.++
T Consensus 1284 ~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~--~~G~I~IdG~dI 1350 (1522)
T TIGR00957 1284 RVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES--AEGEIIIDGLNI 1350 (1522)
T ss_pred cEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC--CCCeEEECCEEc
Confidence 58899998877421 13599999999999999999999999999999999997665 589999999986
Q ss_pred cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000517 928 VQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-------IKDSLVGIPG 997 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 997 (1449)
.+ ..+|+.++||||++.+|.. |++|||.... + ..++.++++++..++.+ -.|+.+|..|
T Consensus 1351 ~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~----~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G 1419 (1522)
T TIGR00957 1351 AKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------Q----YSDEEVWWALELAHLKTFVSALPDKLDHECAEGG 1419 (1522)
T ss_pred cccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------C----CCHHHHHHHHHHcCcHHHHhhCccCCCceecCCC
Confidence 43 5678899999999999875 9999995210 1 22345778888887754 3577787655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
. .||||||||++|||||+++|+||+||||||+||+++...|++.|++.. +++|||+++|+++ ....+|+|++|+ +
T Consensus 1420 ~-~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld-~ 1494 (1522)
T TIGR00957 1420 E-NLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLD-K 1494 (1522)
T ss_pred C-cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEE-C
Confidence 4 699999999999999999999999999999999999999999999864 5899999999975 567899999998 5
Q ss_pred cEEEEecCCC
Q 000517 1078 GRIIYCGPLG 1087 (1449)
Q Consensus 1078 G~~v~~G~~~ 1087 (1449)
|++++.|++.
T Consensus 1495 G~IvE~G~~~ 1504 (1522)
T TIGR00957 1495 GEVAEFGAPS 1504 (1522)
T ss_pred CEEEEECCHH
Confidence 9999999873
No 24
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-63 Score=630.89 Aligned_cols=488 Identities=22% Similarity=0.264 Sum_probs=351.8
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCC----------CCC-------CCce
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLE----------EFV-------PPKT 246 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~----------~~~-------~~~~ 246 (1449)
.++|+|||+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|..+. ... .++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999987 899999986431 100 1246
Q ss_pred EEEEcCCC--ccCCCCCHHHHHHHHHHcc-CCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHH
Q 000517 247 SAYISQND--LHIAEMTVRETVDFSARCQ-GVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILK 323 (1449)
Q Consensus 247 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~ 323 (1449)
++||+|++ .+++.+||+||+.++.+.. +.. +.+ ...+++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~----------~~~------------------------~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS----------REE------------------------AMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC----------HHH------------------------HHHHHHHHHH
Confidence 99999987 5788999999999976532 110 000 0123567899
Q ss_pred HhCCCc---cccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEE
Q 000517 324 ILGLDV---CADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISL 400 (1449)
Q Consensus 324 ~lgL~~---~~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~ 400 (1449)
.+||++ ..+..+.+ |||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++..+.|+|+ +
T Consensus 152 ~~gL~~~~~~~~~~~~~-----LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~-i 225 (623)
T PRK10261 152 QVRIPEAQTILSRYPHQ-----LSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIF-I 225 (623)
T ss_pred HCCCCChhhHHhCCCcc-----CCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEE-E
Confidence 999964 35666665 99999999999999999999999999999999999999999999997655666555 5
Q ss_pred ecCchhHHhhcCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHH
Q 000517 401 LQPAPETFDLFDDIILMAEGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMF 480 (1449)
Q Consensus 401 ~q~~~~~~~~fD~v~lL~~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~ 480 (1449)
+|...++.++||+|++|++|++++.|+++++.. .|.+.-..+++
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~~~~~l~---------------------------- 269 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHPYTRALL---------------------------- 269 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCChhhhhhh----------------------------
Confidence 677888899999999999999999998766521 00000000000
Q ss_pred HHHHhcChhhHhHHHHhcCcccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHH
Q 000517 481 SKKFKESPLVKKLDEELLVPYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVF 560 (1449)
Q Consensus 481 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf 560 (1449)
+ . .+
T Consensus 270 -~-------------~--~~------------------------------------------------------------ 273 (623)
T PRK10261 270 -A-------------A--VP------------------------------------------------------------ 273 (623)
T ss_pred -h-------------c--cC------------------------------------------------------------
Confidence 0 0 00
Q ss_pred hcccCCccccchhhhhHHHHHHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHH
Q 000517 561 LRTRMEIDVFHGNYYMGSLYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCL 640 (1449)
Q Consensus 561 ~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i 640 (1449)
.... .
T Consensus 274 ---~~~~--~---------------------------------------------------------------------- 278 (623)
T PRK10261 274 ---QLGA--M---------------------------------------------------------------------- 278 (623)
T ss_pred ---cccc--c----------------------------------------------------------------------
Confidence 0000 0
Q ss_pred HHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHc
Q 000517 641 TYYVIGYSPEVWRFFRQFILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWIS 720 (1449)
Q Consensus 641 ~Y~~~gl~~~~~~f~~~~l~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~is 720 (1449)
.|-. .+ ...|.
T Consensus 279 ----~~~~-------------------------------------------------------~~-~~~~~--------- 289 (623)
T PRK10261 279 ----KGLD-------------------------------------------------------YP-RRFPL--------- 289 (623)
T ss_pred ----cccc-------------------------------------------------------CC-ccccc---------
Confidence 0000 00 00000
Q ss_pred HHHHHHHHHHHHhhcCCcccccCCCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccc
Q 000517 721 PVTYGEIGLSVNEFLAPRWQKMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVM 800 (1449)
Q Consensus 721 p~~y~~~al~~nef~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~ 800 (1449)
..
T Consensus 290 ---------------------------------------------------------------------------~~--- 291 (623)
T PRK10261 290 ---------------------------------------------------------------------------IS--- 291 (623)
T ss_pred ---------------------------------------------------------------------------cc---
Confidence 00
Q ss_pred cchhhhhhhcccccCCCCCCcccCCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccc
Q 000517 801 ISHEKLAKMQESEDSSYGEPVKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDV 880 (1449)
Q Consensus 801 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 880 (1449)
. . . .....+.. . . ... ..+ ...+.++|+++.++..... .....+...+|+||
T Consensus 292 -~-~-------~--~~~~~~~~-~--~---~~~--~~~-------~~~L~~~~l~~~y~~~~~~--~~~~~~~~~~l~~v 343 (623)
T PRK10261 292 -L-E-------H--PAKQEPPI-E--Q---DTV--VDG-------EPILQVRNLVTRFPLRSGL--LNRVTREVHAVEKV 343 (623)
T ss_pred -c-c-------c--ccccCccc-c--c---ccc--cCC-------CceEEEeeeEEEEcCCCcc--ccccCCceEEEeee
Confidence 0 0 0 00000000 0 0 000 000 0136677777655311000 00000124699999
Q ss_pred eeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCC--CCCCCCCHH
Q 000517 881 TGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTD--IHSPNITVE 952 (1449)
Q Consensus 881 s~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d--~~~~~lTv~ 952 (1449)
||+|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++.. ..+++.++|++|++ .+++.+||.
T Consensus 344 s~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~ 421 (623)
T PRK10261 344 SFDLWPGETLSLVGESGSGKSTTGRALLRLVES--QGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVG 421 (623)
T ss_pred EeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHH
Confidence 999999999999999999999999999998654 58999999986532 12456799999997 578899999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000517 953 ESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGL 1031 (1449)
Q Consensus 953 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgL 1031 (1449)
|++.+....+. ....+..++.+.++++.+||. +..++.++ .|||||||||+|||||+.+|+||||||||+||
T Consensus 422 ~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~~~-----~LSgGqrQRv~iAraL~~~p~llllDEPts~L 494 (623)
T PRK10261 422 DSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRYPH-----EFSGGQRQRICIARALALNPKVIIADEAVSAL 494 (623)
T ss_pred HHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 99987654321 112334456788999999996 55666654 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1032 DARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1032 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
|+.++..+++.|++++++ |.|||++||+++ .+...+|++++|. +|++++.|+..
T Consensus 495 D~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~-~G~iv~~g~~~ 549 (623)
T PRK10261 495 DVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMY-LGQIVEIGPRR 549 (623)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEecCHH
Confidence 999999999999999765 899999999986 5778899999997 58999999864
No 25
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.3e-62 Score=618.14 Aligned_cols=464 Identities=21% Similarity=0.275 Sum_probs=344.3
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CeeeEEEECCccCCCCCC-------CceEEEEcCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSL--KVTGEVSYNGYKLEEFVP-------PKTSAYISQND 254 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 254 (1449)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|+++..... ++.++|++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 469999999999999999999999999999999999998620 138999999998754321 24699999986
Q ss_pred c--cCCCCCHHHHHHHHHHcc-CCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc--
Q 000517 255 L--HIAEMTVRETVDFSARCQ-GVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV-- 329 (1449)
Q Consensus 255 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~-- 329 (1449)
. +.+.+||+|++.+..... +.. +.+ ...+++++++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------REA------------------------ARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------HHH------------------------HHHHHHHHHHHCCCCChH
Confidence 4 567789999988654321 110 000 0123567899999975
Q ss_pred -cccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHH
Q 000517 330 -CADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETF 408 (1449)
Q Consensus 330 -~~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~ 408 (1449)
..|+.+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++ +|...++.
T Consensus 148 ~~~~~~~~~-----LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~v-tHd~~~~~ 221 (529)
T PRK15134 148 KRLTDYPHQ-----LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFI-THNLSIVR 221 (529)
T ss_pred HHHhhCCcc-----cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEE-cCcHHHHH
Confidence 34777765 999999999999999999999999999999999999999999999876546676665 56677888
Q ss_pred hhcCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcCh
Q 000517 409 DLFDDIILMAEGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESP 488 (1449)
Q Consensus 409 ~~fD~v~lL~~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 488 (1449)
++||+|++|++|++++.|+++++... |.. +
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~~-------------------------~----------------- 251 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PTH-------------------------P----------------- 251 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CCC-------------------------H-----------------
Confidence 99999999999999999876554210 000 0
Q ss_pred hhHhHHHHhcCcccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCcc
Q 000517 489 LVKKLDEELLVPYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEID 568 (1449)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~ 568 (1449)
+ . +. ++...
T Consensus 252 ---------------------------~-------~-----~~----------------------------~~~~~---- 260 (529)
T PRK15134 252 ---------------------------Y-------T-----QK----------------------------LLNSE---- 260 (529)
T ss_pred ---------------------------H-------H-----HH----------------------------HHHhC----
Confidence 0 0 00 00000
Q ss_pred ccchhhhhHHHHHHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCc
Q 000517 569 VFHGNYYMGSLYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYS 648 (1449)
Q Consensus 569 ~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~ 648 (1449)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHH
Q 000517 649 PEVWRFFRQFILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIG 728 (1449)
Q Consensus 649 ~~~~~f~~~~l~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~a 728 (1449)
+
T Consensus 261 -------------------------------------------------------------~------------------ 261 (529)
T PRK15134 261 -------------------------------------------------------------P------------------ 261 (529)
T ss_pred -------------------------------------------------------------c------------------
Confidence 0
Q ss_pred HHHHhhcCCcccccCCCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhhhhh
Q 000517 729 LSVNEFLAPRWQKMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAK 808 (1449)
Q Consensus 729 l~~nef~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~~~ 808 (1449)
..
T Consensus 262 ------------------------------------------------------------------~~------------ 263 (529)
T PRK15134 262 ------------------------------------------------------------------SG------------ 263 (529)
T ss_pred ------------------------------------------------------------------cc------------
Confidence 00
Q ss_pred hcccccCCCCCCcccCCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCe
Q 000517 809 MQESEDSSYGEPVKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGV 888 (1449)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge 888 (1449)
. .. . . . .. +.. .+.++|+++.++...+. .+...+.+.+|+|||++|++||
T Consensus 264 ------~-~~-~---~--~---~~-----~~~-------~l~~~~l~~~~~~~~~~--~~~~~~~~~il~~isl~i~~Ge 313 (529)
T PRK15134 264 ------D-PV-P---L--P---EP-----ASP-------LLDVEQLQVAFPIRKGI--LKRTVDHNVVVKNISFTLRPGE 313 (529)
T ss_pred ------c-cc-c---c--C---CC-----CCC-------cccccCcEEEeecCccc--cccccccceeeecceeEEcCCC
Confidence 0 00 0 0 0 00 000 13344454433210000 0000012469999999999999
Q ss_pred EEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---c---cccceEEEEccCC--CCCCCCCHHHHHHHHHH
Q 000517 889 LTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---E---TFARVSGYCEQTD--IHSPNITVEESVIFSAW 960 (1449)
Q Consensus 889 ~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~---~~~~~~gyv~Q~d--~~~~~lTv~e~l~f~~~ 960 (1449)
++||+||||||||||+++|+|... .+|+|.++|.++.. . .+++.+||++|++ .+++.+||.||+.+...
T Consensus 314 ~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~ 390 (529)
T PRK15134 314 TLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLR 390 (529)
T ss_pred EEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHH
Confidence 999999999999999999999763 47999999976532 1 1356789999996 47788999999988653
Q ss_pred hccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHH
Q 000517 961 LRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIV 1039 (1449)
Q Consensus 961 lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i 1039 (1449)
.+.. .......++.++++++.++|. +..++.++ .|||||||||+||++|+.+|++|+|||||+|||+.++..+
T Consensus 391 ~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l 464 (529)
T PRK15134 391 VHQP-TLSAAQREQQVIAVMEEVGLDPETRHRYPA-----EFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQI 464 (529)
T ss_pred hccc-cCChHHHHHHHHHHHHHcCCCHHHHhcCCc-----cCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHH
Confidence 3211 122334456788999999997 45666653 7999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1040 MRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1040 ~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
++.|++++++ |+|||++||++. .+.+.+|++++|. +|+++..|+.
T Consensus 465 ~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~-~G~i~~~~~~ 510 (529)
T PRK15134 465 LALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLR-QGEVVEQGDC 510 (529)
T ss_pred HHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEE-CCEEEEEcCH
Confidence 9999999865 899999999986 4778899999998 5899999875
No 26
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.4e-62 Score=614.14 Aligned_cols=454 Identities=20% Similarity=0.285 Sum_probs=344.4
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIAE 259 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1449)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 35899999999999999999999999999999999999997 9999999988754322 2468999999999999
Q ss_pred CCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccc
Q 000517 260 MTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAM 339 (1449)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 339 (1449)
+||+||+.|.... . . + ....++++++.+||++..++.+++
T Consensus 101 ~tv~e~l~~~~~~-----~--------~-~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-- 140 (510)
T PRK15439 101 LSVKENILFGLPK-----R--------Q-A------------------------SMQKMKQLLAALGCQLDLDSSAGS-- 140 (510)
T ss_pred CcHHHHhhccccc-----c--------h-H------------------------HHHHHHHHHHHcCCCccccCChhh--
Confidence 9999999875310 0 0 0 011245688999999888888876
Q ss_pred cccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeC
Q 000517 340 RRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAE 419 (1449)
Q Consensus 340 ~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~ 419 (1449)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++ +|..+++.++||+|++|++
T Consensus 141 ---LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiiiv-tHd~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 141 ---LEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-QGVGIVFI-SHKLPEIRQLADRISVMRD 215 (510)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEE-eCCHHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999875 46666665 5667788899999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhHhHHHHhcC
Q 000517 420 GKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDEELLV 499 (1449)
Q Consensus 420 G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 499 (1449)
|++++.|+.+++... +. .+.+.. .
T Consensus 216 G~i~~~g~~~~~~~~---------------~~-----------------------------~~~~~~------------~ 239 (510)
T PRK15439 216 GTIALSGKTADLSTD---------------DI-----------------------------IQAITP------------A 239 (510)
T ss_pred CEEEEecChHHcCHH---------------HH-----------------------------HHHHhC------------c
Confidence 999999987654210 00 000000 0
Q ss_pred cccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhhhHHH
Q 000517 500 PYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYYMGSL 579 (1449)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~g~l 579 (1449)
... .....
T Consensus 240 -----~~~-------------------------------------------------------~~~~~------------ 247 (510)
T PRK15439 240 -----ARE-------------------------------------------------------KSLSA------------ 247 (510)
T ss_pred -----ccc-------------------------------------------------------ccccc------------
Confidence 000 00000
Q ss_pred HHHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHHHHHHHH
Q 000517 580 YFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQFI 659 (1449)
Q Consensus 580 ff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l 659 (1449)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHHHhhcCCcc
Q 000517 660 LLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFLAPRW 739 (1449)
Q Consensus 660 ~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~ 739 (1449)
... .
T Consensus 248 -------------------------------------------------~~~---------------------------~ 251 (510)
T PRK15439 248 -------------------------------------------------SQK---------------------------L 251 (510)
T ss_pred -------------------------------------------------ccc---------------------------c
Confidence 000 0
Q ss_pred cccCCCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhhhhhhcccccCCCCC
Q 000517 740 QKMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQESEDSSYGE 819 (1449)
Q Consensus 740 ~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 819 (1449)
. ..+ +
T Consensus 252 ~----------------~~~-----------------------------------------------------------~ 256 (510)
T PRK15439 252 W----------------LEL-----------------------------------------------------------P 256 (510)
T ss_pred c----------------ccc-----------------------------------------------------------c
Confidence 0 000 0
Q ss_pred CcccCCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCC
Q 000517 820 PVKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAG 899 (1449)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaG 899 (1449)
.. . . ..+ .+ +..+..+|++. .+|+|||++|++||++||+||||||
T Consensus 257 ~~--~--~---~~~---~~-------~~~l~~~~l~~------------------~~l~~isl~i~~Ge~~~l~G~NGsG 301 (510)
T PRK15439 257 GN--R--R---QQA---AG-------APVLTVEDLTG------------------EGFRNISLEVRAGEILGLAGVVGAG 301 (510)
T ss_pred cc--c--c---ccC---CC-------CceEEEeCCCC------------------CCccceeEEEcCCcEEEEECCCCCC
Confidence 00 0 0 000 00 01255666541 1589999999999999999999999
Q ss_pred hhHHHhhhcCCCCCCeeEEEEEEcCccCccc----cccceEEEEccCC---CCCCCCCHHHHHHHHHHhccCCCCChHHH
Q 000517 900 KTTLMDVLAGRKTSGYVEGEIKISGYPKVQE----TFARVSGYCEQTD---IHSPNITVEESVIFSAWLRLAPEINSKTK 972 (1449)
Q Consensus 900 KSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~----~~~~~~gyv~Q~d---~~~~~lTv~e~l~f~~~lr~~~~~~~~~~ 972 (1449)
||||+++|+|...+ .+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++......+..........
T Consensus 302 KSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~ 379 (510)
T PRK15439 302 RTELAETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARE 379 (510)
T ss_pred HHHHHHHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHH
Confidence 99999999997654 479999999865321 1345689999984 47788999999864211111100112223
Q ss_pred HHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCC
Q 000517 973 AEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGR 1051 (1449)
Q Consensus 973 ~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~ 1051 (1449)
++.++++++.++|. +..++.++ .|||||||||+||++|+.+|+||||||||+|||+.+...+++.|++++++|.
T Consensus 380 ~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~ 454 (510)
T PRK15439 380 NAVLERYRRALNIKFNHAEQAAR-----TLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNV 454 (510)
T ss_pred HHHHHHHHHHcCCCCCCccCccc-----cCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCC
Confidence 45688999999997 66777754 7999999999999999999999999999999999999999999999988899
Q ss_pred EEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1052 TIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1052 tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
|||++||+++ ++.+.+|++++|. +|+++..|..++
T Consensus 455 tiIivsHd~~-~i~~~~d~i~~l~-~G~i~~~~~~~~ 489 (510)
T PRK15439 455 AVLFISSDLE-EIEQMADRVLVMH-QGEISGALTGAA 489 (510)
T ss_pred EEEEECCCHH-HHHHhCCEEEEEE-CCEEEEEEcccc
Confidence 9999999986 5778899999997 589999887754
No 27
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.5e-62 Score=614.95 Aligned_cols=445 Identities=22% Similarity=0.305 Sum_probs=341.0
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCC--CCCCCeeeEEEECC-----------------------ccC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNL--DPSLKVTGEVSYNG-----------------------YKL 238 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l--~~~~~~~G~V~~~G-----------------------~~~ 238 (1449)
+++|+|+|+.+.+|++++|+|||||||||||++|+|.+ +|+ +|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccccccc
Confidence 35999999999999999999999999999999999997 576 89999972 221
Q ss_pred C-------CC------CCCceEEEEcCC-CccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHH
Q 000517 239 E-------EF------VPPKTSAYISQN-DLHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYM 304 (1449)
Q Consensus 239 ~-------~~------~~~~~~~yv~Q~-d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~ 304 (1449)
. .. ..++.++|++|+ +.+++.+||+||+.|+....+.. ..+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~----------~~~--------------- 144 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYE----------GKE--------------- 144 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCC----------HHH---------------
Confidence 1 00 013468999997 67888999999999865432210 000
Q ss_pred HHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHH
Q 000517 305 KAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIAC 384 (1449)
Q Consensus 305 ~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~ 384 (1449)
.+.+++.+++.+||++..+..+++ |||||||||+||+||+.+|++|||||||+|||+.++..+.+.
T Consensus 145 ---------~~~~~~~~l~~~gl~~~~~~~~~~-----LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 210 (520)
T TIGR03269 145 ---------AVGRAVDLIEMVQLSHRITHIARD-----LSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA 210 (520)
T ss_pred ---------HHHHHHHHHHHcCChhhhhcCccc-----CCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH
Confidence 012356789999998887887766 999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhh
Q 000517 385 IQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQF 464 (1449)
Q Consensus 385 L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~ 464 (1449)
|+++++..+.|+|++ +|....+.++||+|++|++|++++.|+++++.+.+.
T Consensus 211 l~~l~~~~g~tviiv-tHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~---------------------------- 261 (520)
T TIGR03269 211 LEEAVKASGISMVLT-SHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFM---------------------------- 261 (520)
T ss_pred HHHHHHhcCcEEEEE-eCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHH----------------------------
Confidence 999876556676655 566777888999999999999988776543211000
Q ss_pred hcccCCCCccCCHHHHHHHHhcChhhHhHHHHhcCcccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHH
Q 000517 465 WLHTELPYSYFSVDMFSKKFKESPLVKKLDEELLVPYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVF 544 (1449)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~ 544 (1449)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhcccCCccccchhhhhHHHHHHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHH
Q 000517 545 KTTQLIMLATMAMTVFLRTRMEIDVFHGNYYMGSLYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATI 624 (1449)
Q Consensus 545 ~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l 624 (1449)
. ..
T Consensus 262 ----------------~--~~----------------------------------------------------------- 264 (520)
T TIGR03269 262 ----------------E--GV----------------------------------------------------------- 264 (520)
T ss_pred ----------------h--hc-----------------------------------------------------------
Confidence 0 00
Q ss_pred HHhhHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccc
Q 000517 625 LKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQFILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVI 704 (1449)
Q Consensus 625 ~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i 704 (1449)
. +
T Consensus 265 -----------------------~----~--------------------------------------------------- 266 (520)
T TIGR03269 265 -----------------------S----E--------------------------------------------------- 266 (520)
T ss_pred -----------------------h----h---------------------------------------------------
Confidence 0 0
Q ss_pred cCCChhHHHHHHHhHcHHHHHHHHHHHHhhcCCcccccCCCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHH
Q 000517 705 SRPSMPAWLKWGFWISPVTYGEIGLSVNEFLAPRWQKMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGF 784 (1449)
Q Consensus 705 ~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~ 784 (1449)
+
T Consensus 267 ----~--------------------------------------------------------------------------- 267 (520)
T TIGR03269 267 ----V--------------------------------------------------------------------------- 267 (520)
T ss_pred ----h---------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHhccccCCCccccchhhhhhhcccccCCCCCCcccCCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccch
Q 000517 785 TLALTFLKSSGSSRVMISHEKLAKMQESEDSSYGEPVKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEM 864 (1449)
Q Consensus 785 ~laL~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 864 (1449)
... . . . .. + ...++++|+++.++..
T Consensus 268 ----------~~~----------------------~---~--~---~~-----~-------~~~l~~~~l~~~~~~~--- 292 (520)
T TIGR03269 268 ----------EKE----------------------C---E--V---EV-----G-------EPIIKVRNVSKRYISV--- 292 (520)
T ss_pred ----------ccc----------------------c---c--c---CC-----C-------CceEEEeccEEEeccC---
Confidence 000 0 0 0 00 0 0025566766654210
Q ss_pred hccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEc-Ccc---Ccc------ccccc
Q 000517 865 RERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKIS-GYP---KVQ------ETFAR 934 (1449)
Q Consensus 865 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~-G~~---~~~------~~~~~ 934 (1449)
..+++.+|+|+||+|++||+++|+||||||||||+++|+|...+ .+|+|.++ |.+ ... ...++
T Consensus 293 -----~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~~g~~~~~~~~~~~~~~~~~~~ 365 (520)
T TIGR03269 293 -----DRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEP--TSGEVNVRVGDEWVDMTKPGPDGRGRAKR 365 (520)
T ss_pred -----CCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEEecCCccccccccchhhHHHHhh
Confidence 01124699999999999999999999999999999999998654 48999996 532 111 12345
Q ss_pred eEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-----cccccccCCCCCCCCHHHHHHH
Q 000517 935 VSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-----IKDSLVGIPGVNGLSTEQRKRL 1009 (1449)
Q Consensus 935 ~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-----~~~~~vg~~~~~~LSgGqrqRl 1009 (1449)
.+||++|++.+++.+||.|++.+...+. ...+..++.+.++++.++|.+ ..++.+ ..|||||||||
T Consensus 366 ~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~-----~~LSgGq~qrv 436 (520)
T TIGR03269 366 YIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKYP-----DELSEGERHRV 436 (520)
T ss_pred hEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCCh-----hhCCHHHHHHH
Confidence 6899999988889999999998754321 122334466889999999975 345554 37999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1010 TIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1010 ~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
+|||||+.+|+||+|||||+|||+.+...+++.|++++++ |.|||++||++. .+.+.+|++++|. +|+++..|++
T Consensus 437 ~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~-~G~i~~~g~~ 512 (520)
T TIGR03269 437 ALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMR-DGKIVKIGDP 512 (520)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 9999999999999999999999999999999999999764 899999999986 5778899999997 5899998875
No 28
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=5.3e-62 Score=609.47 Aligned_cols=460 Identities=20% Similarity=0.310 Sum_probs=344.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIAE 259 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1449)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ ..+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 35899999999999999999999999999999999998861 128999999988764321 3469999999989999
Q ss_pred CCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccc-ccccccc
Q 000517 260 MTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCA-DTMVGNA 338 (1449)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~-dt~vg~~ 338 (1449)
+||+||+.++......+... ..++ ....++.+++.+||.+.. ++.+++
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~------~~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~~- 141 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRM------AYNA------------------------MYLRAKNLLRELQLDADNVTRPVGD- 141 (500)
T ss_pred CcHHHHHHhhcccccccccc------CHHH------------------------HHHHHHHHHHHcCCCCCcccCchhh-
Confidence 99999998864321000000 0000 011346689999998654 566765
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++ +|+..++.++||+|++|+
T Consensus 142 ----LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviii-tHd~~~~~~~~d~i~~l~ 215 (500)
T TIGR02633 142 ----YGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-HGVACVYI-SHKLNEVKAVCDTICVIR 215 (500)
T ss_pred ----CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEE-eCcHHHHHHhCCEEEEEe
Confidence 999999999999999999999999999999999999999999999875 46666654 566788889999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhHhHHHHhc
Q 000517 419 EGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDEELL 498 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 498 (1449)
+|++++.|+.++... .... +
T Consensus 216 ~G~i~~~~~~~~~~~--------------------------------------------~~~~-------------~--- 235 (500)
T TIGR02633 216 DGQHVATKDMSTMSE--------------------------------------------DDII-------------T--- 235 (500)
T ss_pred CCeEeeecCcccCCH--------------------------------------------HHHH-------------H---
Confidence 999987664221000 0000 0
Q ss_pred CcccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhhhHH
Q 000517 499 VPYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYYMGS 578 (1449)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~g~ 578 (1449)
.+.
T Consensus 236 ------------------------------------------------------------~~~----------------- 238 (500)
T TIGR02633 236 ------------------------------------------------------------MMV----------------- 238 (500)
T ss_pred ------------------------------------------------------------HHh-----------------
Confidence 000
Q ss_pred HHHHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHHHHHHH
Q 000517 579 LYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQF 658 (1449)
Q Consensus 579 lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~ 658 (1449)
+.
T Consensus 239 -------------------------------------------------------------------~~----------- 240 (500)
T TIGR02633 239 -------------------------------------------------------------------GR----------- 240 (500)
T ss_pred -------------------------------------------------------------------Cc-----------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHHHhhcCCc
Q 000517 659 ILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFLAPR 738 (1449)
Q Consensus 659 l~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 738 (1449)
..+
T Consensus 241 -------------------------------------------------~~~---------------------------- 243 (500)
T TIGR02633 241 -------------------------------------------------EIT---------------------------- 243 (500)
T ss_pred -------------------------------------------------ccc----------------------------
Confidence 000
Q ss_pred ccccCCCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhhhhhhcccccCCCC
Q 000517 739 WQKMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQESEDSSYG 818 (1449)
Q Consensus 739 ~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 818 (1449)
. . .
T Consensus 244 ---------------------------------------------------------~--~----------------~-- 246 (500)
T TIGR02633 244 ---------------------------------------------------------S--L----------------Y-- 246 (500)
T ss_pred ---------------------------------------------------------c--c----------------c--
Confidence 0 0 0
Q ss_pred CCcccCCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCC
Q 000517 819 EPVKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGA 898 (1449)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGa 898 (1449)
+. . . .. .++ ..+.++|+++++.. .+++.+|+|+||+|++||++||+|||||
T Consensus 247 -~~--~--~---~~----~~~-------~~l~~~~l~~~~~~----------~~~~~~l~~is~~i~~Ge~~~l~G~NGs 297 (500)
T TIGR02633 247 -PH--E--P---HE----IGD-------VILEARNLTCWDVI----------NPHRKRVDDVSFSLRRGEILGVAGLVGA 297 (500)
T ss_pred -cc--c--c---cC----CCC-------ceEEEeCCcccccc----------cccccccccceeEEeCCcEEEEeCCCCC
Confidence 00 0 0 00 000 12556666543210 0123589999999999999999999999
Q ss_pred ChhHHHhhhcCCCCCCeeEEEEEEcCccCcc----ccccceEEEEccCC---CCCCCCCHHHHHHHHHH--hccCCCCCh
Q 000517 899 GKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ----ETFARVSGYCEQTD---IHSPNITVEESVIFSAW--LRLAPEINS 969 (1449)
Q Consensus 899 GKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d---~~~~~lTv~e~l~f~~~--lr~~~~~~~ 969 (1449)
||||||++|+|..++ +.+|+|.++|.+... ...++.+||++|+. .+++.+||+||+.++.. .........
T Consensus 298 GKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~ 376 (500)
T TIGR02633 298 GRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDA 376 (500)
T ss_pred CHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCH
Confidence 999999999998653 147999999977532 23456789999995 57889999999987532 111001122
Q ss_pred HHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh
Q 000517 970 KTKAEFVNEVLETIELDA-IKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVN 1048 (1449)
Q Consensus 970 ~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~ 1048 (1449)
...++.++++++.++|.+ ..++.++ .||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++
T Consensus 377 ~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~ 451 (500)
T TIGR02633 377 AAELQIIGSAIQRLKVKTASPFLPIG-----RLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQ 451 (500)
T ss_pred HHHHHHHHHHHHhcCccCCCccCccc-----cCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHh
Confidence 334566889999999964 4676654 7999999999999999999999999999999999999999999999988
Q ss_pred cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1049 TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1049 ~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
+|.|||++|||++ ++.+.+|++++|. +|+++..++..
T Consensus 452 ~g~tviivsHd~~-~~~~~~d~v~~l~-~G~i~~~~~~~ 488 (500)
T TIGR02633 452 EGVAIIVVSSELA-EVLGLSDRVLVIG-EGKLKGDFVNH 488 (500)
T ss_pred CCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEEEccc
Confidence 8999999999986 5778899999997 58999887654
No 29
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-62 Score=609.77 Aligned_cols=452 Identities=22% Similarity=0.324 Sum_probs=343.8
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC----CCceEEEEcCCCccCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV----PPKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~~~~~l 260 (1449)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++||+|++.+++.+
T Consensus 18 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (501)
T PRK11288 18 KALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPEM 94 (501)
T ss_pred EEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCCC
Confidence 5899999999999999999999999999999999999987 999999998875322 145799999999899999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||+||+.++......+. ....+ ....++.+++.+||++..++.+++
T Consensus 95 tv~~~l~~~~~~~~~~~-------~~~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~--- 140 (501)
T PRK11288 95 TVAENLYLGQLPHKGGI-------VNRRL------------------------LNYEAREQLEHLGVDIDPDTPLKY--- 140 (501)
T ss_pred CHHHHHHhcccccccCC-------CCHHH------------------------HHHHHHHHHHHcCCCCCcCCchhh---
Confidence 99999988532100000 00000 011346689999998777877765
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++ +|+..++.++||+|++|++|
T Consensus 141 --LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiiii-tHd~~~~~~~~d~i~~l~~G 216 (501)
T PRK11288 141 --LSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-EGRVILYV-SHRMEEIFALCDAITVFKDG 216 (501)
T ss_pred --CCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEE-eCCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999865 46676665 55667888999999999999
Q ss_pred eEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhHhHHHHhcCc
Q 000517 421 KIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDEELLVP 500 (1449)
Q Consensus 421 ~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 500 (1449)
+++..++..+. . +.++..+
T Consensus 217 ~i~~~~~~~~~------------------------~-------------------~~~~~~~------------------ 235 (501)
T PRK11288 217 RYVATFDDMAQ------------------------V-------------------DRDQLVQ------------------ 235 (501)
T ss_pred EEEeecCcccc------------------------C-------------------CHHHHHH------------------
Confidence 99754421000 0 0000000
Q ss_pred ccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhhhHHHH
Q 000517 501 YDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYYMGSLY 580 (1449)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~g~lf 580 (1449)
.+.. .
T Consensus 236 ----------------------------------------------------------~~~~-~---------------- 240 (501)
T PRK11288 236 ----------------------------------------------------------AMVG-R---------------- 240 (501)
T ss_pred ----------------------------------------------------------HhcC-C----------------
Confidence 0000 0
Q ss_pred HHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHHHHHHHHH
Q 000517 581 FSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQFIL 660 (1449)
Q Consensus 581 f~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~l~ 660 (1449)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK11288 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHHHhhcCCccc
Q 000517 661 LFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFLAPRWQ 740 (1449)
Q Consensus 661 l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~~~ 740 (1449)
...
T Consensus 241 -----------------------------------------------~~~------------------------------ 243 (501)
T PRK11288 241 -----------------------------------------------EIG------------------------------ 243 (501)
T ss_pred -----------------------------------------------Ccc------------------------------
Confidence 000
Q ss_pred ccCCCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhhhhhhcccccCCCCCC
Q 000517 741 KMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQESEDSSYGEP 820 (1449)
Q Consensus 741 ~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 820 (1449)
. .. . .
T Consensus 244 -------------------------------------------------------~---------~~-------~----~ 248 (501)
T PRK11288 244 -------------------------------------------------------D---------IY-------G----Y 248 (501)
T ss_pred -------------------------------------------------------c---------cc-------c----c
Confidence 0 00 0 0
Q ss_pred cccCCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCCh
Q 000517 821 VKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGK 900 (1449)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGK 900 (1449)
. + .. . .+..+.++|+++ ..+++|+|++|++||++||+|||||||
T Consensus 249 ---~--~---~~----~-------~~~~l~~~~~~~-----------------~~~l~~isl~i~~Ge~~~iiG~NGsGK 292 (501)
T PRK11288 249 ---R--P---RP----L-------GEVRLRLDGLKG-----------------PGLREPISFSVRAGEIVGLFGLVGAGR 292 (501)
T ss_pred ---c--c---cC----C-------CCcEEEEecccc-----------------CCcccceeEEEeCCcEEEEEcCCCCCH
Confidence 0 0 00 0 011355666652 138999999999999999999999999
Q ss_pred hHHHhhhcCCCCCCeeEEEEEEcCccCcc----ccccceEEEEccCC---CCCCCCCHHHHHHHHHHhccCC-C--CChH
Q 000517 901 TTLMDVLAGRKTSGYVEGEIKISGYPKVQ----ETFARVSGYCEQTD---IHSPNITVEESVIFSAWLRLAP-E--INSK 970 (1449)
Q Consensus 901 STLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d---~~~~~lTv~e~l~f~~~lr~~~-~--~~~~ 970 (1449)
|||+++|+|...+ .+|+|.++|.+... ...++.++|++|++ .+++.+|+.|++.+........ . ....
T Consensus 293 STLlk~l~G~~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~ 370 (501)
T PRK11288 293 SELMKLLYGATRR--TAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNR 370 (501)
T ss_pred HHHHHHHcCCCcC--CCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChH
Confidence 9999999998654 58999999976431 12346789999985 4788999999998753211100 0 0122
Q ss_pred HHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc
Q 000517 971 TKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT 1049 (1449)
Q Consensus 971 ~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~ 1049 (1449)
..++.++++++.+++. +..++.++ .|||||||||+||++|+.+|+||||||||+|||+.+...+++.|+++++.
T Consensus 371 ~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~ 445 (501)
T PRK11288 371 WEAENADRFIRSLNIKTPSREQLIM-----NLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQ 445 (501)
T ss_pred HHHHHHHHHHHhcCcccCCccCccc-----cCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhC
Confidence 3345688999999994 66777765 79999999999999999999999999999999999999999999999888
Q ss_pred CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCCCh
Q 000517 1050 GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKHS 1090 (1449)
Q Consensus 1050 g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~~~ 1090 (1449)
|.|||++|||+. ++.+.+|++++|. +|++++.|+.++..
T Consensus 446 g~tviivsHd~~-~~~~~~d~i~~l~-~g~i~~~~~~~~~~ 484 (501)
T PRK11288 446 GVAVLFVSSDLP-EVLGVADRIVVMR-EGRIAGELAREQAT 484 (501)
T ss_pred CCEEEEECCCHH-HHHhhCCEEEEEE-CCEEEEEEccccCC
Confidence 999999999986 5778899999998 58999999886543
No 30
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=4.2e-60 Score=648.85 Aligned_cols=210 Identities=22% Similarity=0.265 Sum_probs=178.3
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.|+|++++++. +...+|+||||+|+|||++||+|+||||||||+++|.|...+ .+|+|.+||.++
T Consensus 1308 ~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p--~~G~I~IDG~di 1374 (1560)
T PTZ00243 1308 SLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEV--CGGEIRVNGREI 1374 (1560)
T ss_pred eEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEc
Confidence 5889999987742 123599999999999999999999999999999999998765 589999999986
Q ss_pred cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000517 928 VQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI-------KDSLVGIPG 997 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 997 (1449)
.. ..+|+.+|||||++.+|. -|++|||... .+ ..++.++++++..+|.+. .|+.+|..|
T Consensus 1375 ~~i~l~~LR~~I~iVpQdp~LF~-gTIreNIdp~------~~----~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G 1443 (1560)
T PTZ00243 1375 GAYGLRELRRQFSMIPQDPVLFD-GTVRQNVDPF------LE----ASSAEVWAALELVGLRERVASESEGIDSRVLEGG 1443 (1560)
T ss_pred ccCCHHHHHhcceEECCCCcccc-ccHHHHhCcc------cC----CCHHHHHHHHHHCCChHHHhhCcccccccccCCc
Confidence 43 567889999999999886 4999999531 11 224568888888887653 577787655
Q ss_pred CCCCCHHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 998 VNGLSTEQRKRLTIAVELVAN-PSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~-p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
. .||||||||++|||||+++ |+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....+|+|++|+
T Consensus 1444 ~-nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd- 1518 (1560)
T PTZ00243 1444 S-NYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD- 1518 (1560)
T ss_pred C-cCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE-
Confidence 4 6999999999999999996 89999999999999999999999999864 5899999999974 567899999998
Q ss_pred CcEEEEecCC
Q 000517 1077 GGRIIYCGPL 1086 (1449)
Q Consensus 1077 gG~~v~~G~~ 1086 (1449)
+|++++.|+.
T Consensus 1519 ~G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 HGAVAEMGSP 1528 (1560)
T ss_pred CCEEEEECCH
Confidence 5999999986
No 31
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=5.9e-60 Score=647.57 Aligned_cols=209 Identities=21% Similarity=0.302 Sum_probs=178.0
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.|+|++++++. +...+|+|||++|+|||++||+|+||||||||+++|+|... .+|+|.|||.++
T Consensus 1217 ~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~di 1282 (1490)
T TIGR01271 1217 QMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVSW 1282 (1490)
T ss_pred eEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEc
Confidence 5889999987742 12469999999999999999999999999999999999764 479999999986
Q ss_pred cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000517 928 VQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-------IKDSLVGIPG 997 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 997 (1449)
.. ..+|+.++||||++.+|+. |++|||... .+..++.++++++.++|.+ -.|+.+|..|
T Consensus 1283 ~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~----------~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G 1351 (1490)
T TIGR01271 1283 NSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPY----------EQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGG 1351 (1490)
T ss_pred ccCCHHHHHhceEEEeCCCccCcc-CHHHHhCcc----------cCCCHHHHHHHHHHCCCHHHHHhCccccccccccCC
Confidence 53 4578899999999999874 999999431 1123456888999988854 3577777654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
.+||||||||++|||||+++|+||+||||||+||..+...|++.|++.. +++|||+++|+++ ....+|+|++|+ +
T Consensus 1352 -~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~-~ 1426 (1490)
T TIGR01271 1352 -YVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIE-G 1426 (1490)
T ss_pred -CcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEE-C
Confidence 4699999999999999999999999999999999999999999999874 5899999999975 567799999998 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|++++.|++
T Consensus 1427 G~ivE~g~p 1435 (1490)
T TIGR01271 1427 SSVKQYDSI 1435 (1490)
T ss_pred CEEEEeCCH
Confidence 899999986
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-61 Score=598.36 Aligned_cols=451 Identities=17% Similarity=0.272 Sum_probs=342.1
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIAE 259 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1449)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 35999999999999999999999999999999999999987 9999999988754321 3569999999888999
Q ss_pred CCHHHHHHHHHH-ccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 260 MTVRETVDFSAR-CQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 260 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
+||+||+.++.. ..+.... ..+ ....++.+++.+||++..++.+++
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~--------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~- 134 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVD--------QDK------------------------MYRDTKAIFDELDIDIDPRAKVAT- 134 (491)
T ss_pred CCHHHHhhcccccccccccC--------HHH------------------------HHHHHHHHHHHcCCCCCccCchhh-
Confidence 999999987531 1110000 000 011346688999998888888776
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
|||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++ +|+.+++.++||+|++|+
T Consensus 135 ----LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tvii~-tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 135 ----LSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-RGCGIVYI-SHKMEEIFQLCDEITILR 208 (491)
T ss_pred ----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEE-ecCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999875 46676665 566778889999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhHhHHHHhc
Q 000517 419 EGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDEELL 498 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 498 (1449)
+|+++..|+.+++.. .+..+ .
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~-------------~-- 229 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIA-------------M-- 229 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHH-------------H--
Confidence 999998776432100 00000 0
Q ss_pred CcccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhhhHH
Q 000517 499 VPYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYYMGS 578 (1449)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~g~ 578 (1449)
+. +
T Consensus 230 -------------------------------------------------------------~~--~-------------- 232 (491)
T PRK10982 230 -------------------------------------------------------------MV--G-------------- 232 (491)
T ss_pred -------------------------------------------------------------Hh--C--------------
Confidence 00 0
Q ss_pred HHHHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHHHHHHH
Q 000517 579 LYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQF 658 (1449)
Q Consensus 579 lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~ 658 (1449)
-
T Consensus 233 --------------------------------------------------------------------~----------- 233 (491)
T PRK10982 233 --------------------------------------------------------------------R----------- 233 (491)
T ss_pred --------------------------------------------------------------------C-----------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHHHhhcCCc
Q 000517 659 ILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFLAPR 738 (1449)
Q Consensus 659 l~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 738 (1449)
.+
T Consensus 234 -------------------------------------------------~~----------------------------- 235 (491)
T PRK10982 234 -------------------------------------------------SL----------------------------- 235 (491)
T ss_pred -------------------------------------------------Cc-----------------------------
Confidence 00
Q ss_pred ccccCCCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhhhhhhcccccCCCC
Q 000517 739 WQKMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQESEDSSYG 818 (1449)
Q Consensus 739 ~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 818 (1449)
.. ...
T Consensus 236 ----------------------------------------------------------~~----------------~~~- 240 (491)
T PRK10982 236 ----------------------------------------------------------TQ----------------RFP- 240 (491)
T ss_pred ----------------------------------------------------------cc----------------ccc-
Confidence 00 000
Q ss_pred CCcccCCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCC
Q 000517 819 EPVKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGA 898 (1449)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGa 898 (1449)
. . . .. . .+..+.++|+++. ...+|+|||+++++||++||+|||||
T Consensus 241 -~---~--~---~~----~-------~~~~i~~~~l~~~---------------~~~~l~~vsl~i~~Ge~~~l~G~nGs 285 (491)
T PRK10982 241 -D---K--E---NK----P-------GEVILEVRNLTSL---------------RQPSIRDVSFDLHKGEILGIAGLVGA 285 (491)
T ss_pred -c---c--c---CC----C-------CCcEEEEeCcccc---------------cCcccceeeEEEeCCcEEEEecCCCC
Confidence 0 0 0 00 0 0113667777653 12489999999999999999999999
Q ss_pred ChhHHHhhhcCCCCCCeeEEEEEEcCccCcc----ccccceEEEEccCC---CCCCCCCHHHHHHHHHH--hccCCC-CC
Q 000517 899 GKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ----ETFARVSGYCEQTD---IHSPNITVEESVIFSAW--LRLAPE-IN 968 (1449)
Q Consensus 899 GKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d---~~~~~lTv~e~l~f~~~--lr~~~~-~~ 968 (1449)
|||||+++|+|...+ .+|+|.++|.++.. ...++.+||++|+. .+++.+|+.+|..+... ...... ..
T Consensus 286 GKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (491)
T PRK10982 286 KRTDIVETLFGIREK--SAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLD 363 (491)
T ss_pred CHHHHHHHHcCCCcC--CccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccC
Confidence 999999999998765 58999999976532 12345689999985 35788888877433210 100001 12
Q ss_pred hHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH
Q 000517 969 SKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIV 1047 (1449)
Q Consensus 969 ~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~ 1047 (1449)
....++.++++++.+++. +..++.++ .|||||||||+||++|+.+|+||||||||+|||+.++..+++.|+++.
T Consensus 364 ~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~ 438 (491)
T PRK10982 364 NSRMKSDTQWVIDSMRVKTPGHRTQIG-----SLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELA 438 (491)
T ss_pred cHHHHHHHHHHHHhcCccCCCcccccc-----cCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHH
Confidence 233345678899999995 45566654 799999999999999999999999999999999999999999999998
Q ss_pred hcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1048 NTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1048 ~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
+.|+|||++||+++ ++.+.+|++++|. +|+++..++.+.
T Consensus 439 ~~~~tvi~vsHd~~-~~~~~~d~v~~l~-~g~i~~~~~~~~ 477 (491)
T PRK10982 439 KKDKGIIIISSEMP-ELLGITDRILVMS-NGLVAGIVDTKT 477 (491)
T ss_pred HCCCEEEEECCChH-HHHhhCCEEEEEE-CCEEEEEEcccc
Confidence 88999999999986 5778999999997 589998776643
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=7.1e-60 Score=588.89 Aligned_cols=447 Identities=19% Similarity=0.283 Sum_probs=328.2
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC---CCceEEEEcCCCcc--C--
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV---PPKTSAYISQNDLH--I-- 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~--~-- 257 (1449)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.. +
T Consensus 17 ~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 93 (490)
T PRK10938 17 KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSP 93 (490)
T ss_pred eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhccc
Confidence 4899999999999999999999999999999999999987 999999997654322 12458999997542 1
Q ss_pred ----CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccc
Q 000517 258 ----AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADT 333 (1449)
Q Consensus 258 ----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 333 (1449)
..+||+|++.+... .+.+++.+++.+||++..|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~l~~~~l~~~~~~ 131 (490)
T PRK10938 94 GEDDTGRTTAEIIQDEVK------------------------------------------DPARCEQLAQQFGITALLDR 131 (490)
T ss_pred chhhccccHHHhcccchh------------------------------------------HHHHHHHHHHHcCCHhhhhC
Confidence 14677777643100 01124567899999888888
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.+++ |||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++ +|+..++.+.||+
T Consensus 132 ~~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tvii~-tH~~~~~~~~~d~ 204 (490)
T PRK10938 132 RFKY-----LSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQ-SGITLVLV-LNRFDEIPDFVQF 204 (490)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cCCeEEEE-eCCHHHHHhhCCE
Confidence 8876 999999999999999999999999999999999999999999999876 46676665 4567788899999
Q ss_pred EEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhHhH
Q 000517 414 IILMAEGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKL 493 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 493 (1449)
|++|++|+++.+|+++++.+. +.+.
T Consensus 205 v~~l~~G~i~~~~~~~~~~~~---------------~~~~---------------------------------------- 229 (490)
T PRK10938 205 AGVLADCTLAETGEREEILQQ---------------ALVA---------------------------------------- 229 (490)
T ss_pred EEEEECCEEEEeCCHHHHhcc---------------hhhh----------------------------------------
Confidence 999999999998876543210 0000
Q ss_pred HHHhcCcccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccchh
Q 000517 494 DEELLVPYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGN 573 (1449)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~ 573 (1449)
... .+ + .+.
T Consensus 230 --~~~------------------------------~~------~--------------------------~~~------- 238 (490)
T PRK10938 230 --QLA------------------------------HS------E--------------------------QLE------- 238 (490)
T ss_pred --hhh------------------------------hh------h--------------------------ccC-------
Confidence 000 00 0 000
Q ss_pred hhhHHHHHHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHH
Q 000517 574 YYMGSLYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWR 653 (1449)
Q Consensus 574 ~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~ 653 (1449)
T Consensus 239 -------------------------------------------------------------------------------- 238 (490)
T PRK10938 239 -------------------------------------------------------------------------------- 238 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHHHh
Q 000517 654 FFRQFILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNE 733 (1449)
Q Consensus 654 f~~~~l~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ne 733 (1449)
+ . ..|
T Consensus 239 -----------------------------------------------~--~---~~~----------------------- 243 (490)
T PRK10938 239 -----------------------------------------------G--V---QLP----------------------- 243 (490)
T ss_pred -----------------------------------------------c--c---ccC-----------------------
Confidence 0 0 000
Q ss_pred hcCCcccccCCCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhhhhhhcccc
Q 000517 734 FLAPRWQKMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQESE 813 (1449)
Q Consensus 734 f~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~~~~~~~~ 813 (1449)
..
T Consensus 244 -------------------------------------------------------------~~----------------- 245 (490)
T PRK10938 244 -------------------------------------------------------------EP----------------- 245 (490)
T ss_pred -------------------------------------------------------------cc-----------------
Confidence 00
Q ss_pred cCCCCCCcccCCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEe
Q 000517 814 DSSYGEPVKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALM 893 (1449)
Q Consensus 814 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 893 (1449)
.... . . . ... . ....++++|+++.++ ++.+|+|+||++++||+++|+
T Consensus 246 -~~~~-~---~--~---~~~---~-------~~~~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~ 292 (490)
T PRK10938 246 -DEPS-A---R--H---ALP---A-------NEPRIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIV 292 (490)
T ss_pred -cccc-c---c--c---ccC---C-------CCceEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEE
Confidence 0000 0 0 0 000 0 011366777766542 245999999999999999999
Q ss_pred cCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc----ccccceEEEEccCCCCCC--CCCHHHHHHHHHHh--ccCC
Q 000517 894 GVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ----ETFARVSGYCEQTDIHSP--NITVEESVIFSAWL--RLAP 965 (1449)
Q Consensus 894 G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d~~~~--~lTv~e~l~f~~~l--r~~~ 965 (1449)
||||||||||+++|+|...+ ..+|+|.++|.+... ...++.+||++|++.+++ ..|+++++.+...- ....
T Consensus 293 G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (490)
T PRK10938 293 GPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQ 371 (490)
T ss_pred CCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhcccccccccc
Confidence 99999999999999996432 147999999976421 123567999999875543 35677766543210 1111
Q ss_pred CCChHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 000517 966 EINSKTKAEFVNEVLETIELDA-IKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVK 1044 (1449)
Q Consensus 966 ~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~ 1044 (1449)
.. ....++.++++++.++|.+ ..++.++ .|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|+
T Consensus 372 ~~-~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~ 445 (490)
T PRK10938 372 AV-SDRQQKLAQQWLDILGIDKRTADAPFH-----SLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVD 445 (490)
T ss_pred CC-CHHHHHHHHHHHHHcCCchhhccCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHH
Confidence 11 1233456889999999987 7777654 799999999999999999999999999999999999999999999
Q ss_pred HHHhcC-CEEEEEecCccHHHHH-hcCeEEEEecCcEEEEec
Q 000517 1045 NIVNTG-RTIVCTIHQPSIDIFE-AFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1045 ~l~~~g-~tvi~~~H~p~~~~~~-~~d~~~~l~~gG~~v~~G 1084 (1449)
+++++| .|||++||+++ ++.+ .+|++++|. +|++++.-
T Consensus 446 ~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~-~G~i~~~~ 485 (490)
T PRK10938 446 VLISEGETQLLFVSHHAE-DAPACITHRLEFVP-DGDIYRYV 485 (490)
T ss_pred HHHhcCCcEEEEEecchh-hhhhhhheeEEEec-CCceEEee
Confidence 998766 47999999976 4555 478999997 57877654
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2.1e-57 Score=506.05 Aligned_cols=469 Identities=24% Similarity=0.351 Sum_probs=356.9
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCeeeEEEECCccCCCCCC-------CceEEEEcCC
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPS--LKVTGEVSYNGYKLEEFVP-------PKTSAYISQN 253 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 253 (1449)
...++++|||.+++||.++|+|.||||||-..+.+.|+++.. ...+|+|.|+|.++-.... ...+++++|+
T Consensus 22 ~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQE 101 (534)
T COG4172 22 TVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQE 101 (534)
T ss_pred ceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEecc
Confidence 356899999999999999999999999999999999998763 4568999999998744332 2479999999
Q ss_pred Cc--cCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccc
Q 000517 254 DL--HIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCA 331 (1449)
Q Consensus 254 d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 331 (1449)
+. +-|-.|+..-+.-..++.... ++++ .+.++-++|+..|+++-.
T Consensus 102 PMtSLNPl~tIg~Qi~E~l~~Hrg~---------~~~~------------------------Ar~r~lelL~~VgI~~p~ 148 (534)
T COG4172 102 PMTSLNPLHTIGKQLAEVLRLHRGL---------SRAA------------------------ARARALELLELVGIPEPE 148 (534)
T ss_pred cccccCcHhHHHHHHHHHHHHHhcc---------cHHH------------------------HHHHHHHHHHHcCCCchh
Confidence 74 667778877776665553211 1111 112345678888998654
Q ss_pred cccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhc
Q 000517 332 DTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLF 411 (1449)
Q Consensus 332 dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~f 411 (1449)
..+ +.+...|||||||||.||.||+.+|++|+-||||++||.....+|.+.|+++..+.| ..++.|+|+..-+-+++
T Consensus 149 ~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~g-Ma~lfITHDL~iVr~~A 225 (534)
T COG4172 149 KRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELG-MAILFITHDLGIVRKFA 225 (534)
T ss_pred hhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhC-cEEEEEeccHHHHHHhh
Confidence 333 334556999999999999999999999999999999999999999999999987654 55666789999999999
Q ss_pred CeEEEEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhH
Q 000517 412 DDIILMAEGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVK 491 (1449)
Q Consensus 412 D~v~lL~~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 491 (1449)
|+|++|.+|+++++|+++.+.. .|.+ ||. +
T Consensus 226 DrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYT-----------------r 255 (534)
T COG4172 226 DRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYT-----------------R 255 (534)
T ss_pred hhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHH-----------------H
Confidence 9999999999999998776621 1110 100 0
Q ss_pred hHHHHhcCcccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccc
Q 000517 492 KLDEELLVPYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFH 571 (1449)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~ 571 (1449)
.+.+ .
T Consensus 256 ~Ll~---a------------------------------------------------------------------------ 260 (534)
T COG4172 256 KLLA---A------------------------------------------------------------------------ 260 (534)
T ss_pred HHHh---c------------------------------------------------------------------------
Confidence 0000 0
Q ss_pred hhhhhHHHHHHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccH
Q 000517 572 GNYYMGSLYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEV 651 (1449)
Q Consensus 572 ~~~~~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~ 651 (1449)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHH
Q 000517 652 WRFFRQFILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSV 731 (1449)
Q Consensus 652 ~~f~~~~l~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~ 731 (1449)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhcCCcccccCCCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhhhhhhcc
Q 000517 732 NEFLAPRWQKMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQE 811 (1449)
Q Consensus 732 nef~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~~~~~~ 811 (1449)
| | .|
T Consensus 261 -e----------P----~g------------------------------------------------------------- 264 (534)
T COG4172 261 -E----------P----SG------------------------------------------------------------- 264 (534)
T ss_pred -C----------C----CC-------------------------------------------------------------
Confidence 0 0 00
Q ss_pred cccCCCCCCcccCCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEE
Q 000517 812 SEDSSYGEPVKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTA 891 (1449)
Q Consensus 812 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~a 891 (1449)
. +. + ..... +.-+..+|++...+.+..+-.. ......++++||+++++||.+|
T Consensus 265 ----~---~~-----p------~~~~~-------~~ll~~~~v~v~f~i~~g~~~r--~~~~~~AVd~isl~L~~gqTlG 317 (534)
T COG4172 265 ----D---PP-----P------LPEDA-------PVLLEVEDLRVWFPIKGGFLRR--TVDHLRAVDGISLTLRRGQTLG 317 (534)
T ss_pred ----C---CC-----C------CCCCC-------CceEEecceEEEEecCCccccc--cchheEEeccceeEecCCCeEE
Confidence 0 00 0 00000 1122233333222222111000 1123568999999999999999
Q ss_pred EecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCCC--CCCCCCHHHHHHHHHHhcc
Q 000517 892 LMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTDI--HSPNITVEESVIFSAWLRL 963 (1449)
Q Consensus 892 l~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d~--~~~~lTv~e~l~f~~~lr~ 963 (1449)
|+|.||||||||=.+|.+...+ +|+|.++|.++.. ..+|+.+-.|+||+. +.|.+||.+-+.-+.....
T Consensus 318 lVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~ 394 (534)
T COG4172 318 LVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHE 394 (534)
T ss_pred EEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcC
Confidence 9999999999999999987654 5999999998643 235678899999984 7799999999988766654
Q ss_pred CCCCChHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHH
Q 000517 964 APEINSKTKAEFVNEVLETIELDAI-KDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRA 1042 (1449)
Q Consensus 964 ~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~ 1042 (1449)
+ ..+..++++++.++|+.+||++- +++. +.++|||||||++|||||+.+|++++||||||.||-.-+.+|.++
T Consensus 395 ~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~L 468 (534)
T COG4172 395 P-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDL 468 (534)
T ss_pred C-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHH
Confidence 3 46778899999999999999863 3333 458999999999999999999999999999999999999999999
Q ss_pred HHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1043 VKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1043 l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|+++.+ .|.+-++++||.. -+-.++|++++|. +|+||+.||.
T Consensus 469 Lr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~-~GkiVE~G~~ 511 (534)
T COG4172 469 LRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMR-DGKIVEQGPT 511 (534)
T ss_pred HHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEe-CCEEeeeCCH
Confidence 999964 5999999999986 4778899999997 5999999996
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.7e-57 Score=571.91 Aligned_cols=201 Identities=23% Similarity=0.325 Sum_probs=162.8
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|+++.+ +++.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.+++.
T Consensus 324 ~l~~~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~~-- 386 (556)
T PRK11819 324 VIEAENLSKSF-------------GDRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQP--DSGTIKIGET-- 386 (556)
T ss_pred EEEEEeEEEEE-------------CCeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCc--
Confidence 46777777654 234699999999999999999999999999999999998654 5899998542
Q ss_pred ccccccceEEEEccCC-CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000517 928 VQETFARVSGYCEQTD-IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-IKDSLVGIPGVNGLSTEQ 1005 (1449)
Q Consensus 928 ~~~~~~~~~gyv~Q~d-~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGq 1005 (1449)
..+||++|+. .+++.+||.|++.+....+. .... ...++++++.+++.+ ..+..++ .|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKKVG-----VLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCchh-----hCCHHH
Confidence 1489999986 67788999999987643221 1111 123457899999964 4566654 799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEE-Eec
Q 000517 1006 RKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRII-YCG 1084 (1449)
Q Consensus 1006 rqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v-~~G 1084 (1449)
||||+||++|+.+|++|+|||||+|||+.++..+++.|+++ .| |||++||++. .+...+|++++|.++|++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF--PG-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CC-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 99999999999999999999999999999999999999987 24 8999999986 5778899999998667776 455
Q ss_pred C
Q 000517 1085 P 1085 (1449)
Q Consensus 1085 ~ 1085 (1449)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-57 Score=570.04 Aligned_cols=198 Identities=21% Similarity=0.289 Sum_probs=163.8
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|++++++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEP--DSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCc--
Confidence 477788776542 24599999999999999999999999999999999998654 4799999873
Q ss_pred ccccccceEEEEccCCC--CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000517 928 VQETFARVSGYCEQTDI--HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 928 ~~~~~~~~~gyv~Q~d~--~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgG 1004 (1449)
+.+||++|+.. +.+.+|++|++.+. ... ...++.++++++.+++. +..+..++ .||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~---~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQW---RQE-----GDDEQAVRGTLGRLLFSQDDIKKSVK-----VLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHh---ccC-----CccHHHHHHHHHHcCCChhHhcCccc-----ccCHH
Confidence 35899999864 45679999998642 111 11235578899999994 56676654 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEE-Ee
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRII-YC 1083 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v-~~ 1083 (1449)
||||++||++|+.+|++|+|||||+|||+.+...+++.|+++ +.|||++||++. .+...+|++++|.+ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999886 459999999986 57778999999984 7887 77
Q ss_pred cCC
Q 000517 1084 GPL 1086 (1449)
Q Consensus 1084 G~~ 1086 (1449)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=8.4e-57 Score=567.45 Aligned_cols=201 Identities=21% Similarity=0.304 Sum_probs=162.3
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|+++.+ +++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.+++.
T Consensus 322 ~l~~~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGF-------------GDKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQP--DSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEE-------------CCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCeEEEECCc--
Confidence 46777777643 234699999999999999999999999999999999998654 4899998542
Q ss_pred ccccccceEEEEccCC-CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHH
Q 000517 928 VQETFARVSGYCEQTD-IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-IKDSLVGIPGVNGLSTEQ 1005 (1449)
Q Consensus 928 ~~~~~~~~~gyv~Q~d-~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGq 1005 (1449)
..+||++|+. .+++.+||.|++.+...... .... +..+.++++.++|.+ ..+..++ .|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKVG-----QLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCchh-----hCCHHH
Confidence 1489999986 47788999999987642211 1111 223567899999964 4566654 799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEE-Eec
Q 000517 1006 RKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRII-YCG 1084 (1449)
Q Consensus 1006 rqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v-~~G 1084 (1449)
||||+||++|+.+|++|+|||||+|||+.+...+++.|+++ +.|||++||++. .+...+|++++|.++|+++ +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF---AGCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC---CCeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 99999999999999999999999999999999999999987 248999999986 4677899999998667776 445
Q ss_pred C
Q 000517 1085 P 1085 (1449)
Q Consensus 1085 ~ 1085 (1449)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 38
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-54 Score=550.76 Aligned_cols=197 Identities=23% Similarity=0.355 Sum_probs=160.2
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|+++.+ +++.+|+|+|+.|++|+++||+|||||||||||++|+|...+ .+|+|.+++.
T Consensus 312 ~l~~~~l~~~y-------------~~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGY-------------GDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAP--VSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEe-------------CCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCC--
Confidence 46777777654 234699999999999999999999999999999999998654 5899999742
Q ss_pred ccccccceEEEEccCC--CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHH
Q 000517 928 VQETFARVSGYCEQTD--IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-IKDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 928 ~~~~~~~~~gyv~Q~d--~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgG 1004 (1449)
..+||++|+. .+.+..|+.+++.- . .. ....+.+.++++.+++.. ..++.++ .||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~~~-----~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEETR-----RFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCchh-----hCCHH
Confidence 2589999974 34456677776531 1 11 122456788999999963 5666654 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEE-Ee
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRII-YC 1083 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v-~~ 1083 (1449)
|||||+||++|+.+|+||||||||+|||+.+...+.+.|+++ +.|||++|||+. .+...+|++++|. +|+++ +.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~i~~l~-~G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDDLYLVH-DGKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEcC
Confidence 999999999999999999999999999999999999999987 349999999986 4777899999998 58887 78
Q ss_pred cCC
Q 000517 1084 GPL 1086 (1449)
Q Consensus 1084 G~~ 1086 (1449)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 39
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=3.6e-55 Score=549.67 Aligned_cols=197 Identities=23% Similarity=0.280 Sum_probs=164.7
Q ss_pred eeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCHHHHH
Q 000517 876 LLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEESV 955 (1449)
Q Consensus 876 iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~e~l 955 (1449)
.|+++|++|++||+++|+||||||||||+++|+|...+ .+|+|.++ ..++|++|+..+.+.+||+|++
T Consensus 354 ~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p--~~G~I~~~----------~~i~y~~Q~~~~~~~~tv~e~l 421 (590)
T PRK13409 354 SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKP--DEGEVDPE----------LKISYKPQYIKPDYDGTVEDLL 421 (590)
T ss_pred EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEEe----------eeEEEecccccCCCCCcHHHHH
Confidence 48999999999999999999999999999999998765 48999886 1489999998888899999999
Q ss_pred HHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Q 000517 956 IFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARA 1035 (1449)
Q Consensus 956 ~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~ 1035 (1449)
.+.... .. ....++++++.++|.+..++.++ .|||||||||+||++|+.+|+||+|||||+|||+.+
T Consensus 422 ~~~~~~-----~~---~~~~~~~~L~~l~l~~~~~~~~~-----~LSGGe~QRvaiAraL~~~p~llLLDEPt~~LD~~~ 488 (590)
T PRK13409 422 RSITDD-----LG---SSYYKSEIIKPLQLERLLDKNVK-----DLSGGELQRVAIAACLSRDADLYLLDEPSAHLDVEQ 488 (590)
T ss_pred HHHhhh-----cC---hHHHHHHHHHHCCCHHHHhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHH
Confidence 874211 11 12346889999999988887764 799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCCC---hhHHHHHHhcC
Q 000517 1036 AAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKH---SSQVIEYFEGI 1100 (1449)
Q Consensus 1036 ~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~~---~~~~~~~f~~~ 1100 (1449)
+..+.+.|++++++ |+|||+++||+. .+...+|++++|. |++...|..... ...+-.|++.+
T Consensus 489 ~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~--~~~~~~g~~~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 489 RLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE--GEPGKHGHASGPMDMREGMNRFLKEL 554 (590)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc--CcceeeeecCCchhHHHHHHHHHHHc
Confidence 99999999999764 899999999986 4677899999995 478777775432 12344566665
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=3.6e-54 Score=550.52 Aligned_cols=202 Identities=22% Similarity=0.347 Sum_probs=161.8
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|+++.+ +++.+|+|+|++|++|+++||+|||||||||||++|+|...+ .+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQI-------------DGKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQA--DSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEE-------------CCeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEE-CCCc
Confidence 36677777654 234699999999999999999999999999999999998654 5899998 4321
Q ss_pred ccccccceEEEEccCC-CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHH
Q 000517 928 VQETFARVSGYCEQTD-IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQ 1005 (1449)
Q Consensus 928 ~~~~~~~~~gyv~Q~d-~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGq 1005 (1449)
.+||++|+. .+++.+||.|++.+.... . ... .....+.++++.+++. +..++.++ .|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~-~--~~~--~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQE-V--MVN--GRPRHVLGYLQDFLFHPKRAMTPVK-----ALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhccc-c--ccc--chHHHHHHHHHhcCCCHHHHhChhh-----hCCHHH
Confidence 489999975 578899999999874321 0 111 1234577889999985 45666654 799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEE-Eec
Q 000517 1006 RKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRII-YCG 1084 (1449)
Q Consensus 1006 rqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v-~~G 1084 (1449)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++|||+. .+...+|+++++..+|++. |.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999976 4677899999997346665 445
Q ss_pred CC
Q 000517 1085 PL 1086 (1449)
Q Consensus 1085 ~~ 1086 (1449)
+.
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 43
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-53 Score=505.30 Aligned_cols=452 Identities=22% Similarity=0.389 Sum_probs=349.5
Q ss_pred cccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccC
Q 000517 182 AKINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHI 257 (1449)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 257 (1449)
...++|+|||+.+++||+++|+|.||||||||+|+|+|.++|+ +|+|.+||++.....+ ..-++.|.|+..++
T Consensus 19 ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~ 95 (500)
T COG1129 19 GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLV 95 (500)
T ss_pred CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhcc
Confidence 3467999999999999999999999999999999999999998 9999999998765444 24689999999999
Q ss_pred CCCCHHHHHHHHHHccCC-CCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccc
Q 000517 258 AEMTVRETVDFSARCQGV-GSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVG 336 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 336 (1449)
|+|||.||+.++...... +- +.+++ .......+|+.+|+....++.|+
T Consensus 96 p~LsVaeNifLgre~~~~~g~-------id~~~------------------------m~~~A~~~l~~lg~~~~~~~~v~ 144 (500)
T COG1129 96 PNLSVAENIFLGREPTRRFGL-------IDRKA------------------------MRRRARELLARLGLDIDPDTLVG 144 (500)
T ss_pred CCccHHHHhhcccccccCCCc-------cCHHH------------------------HHHHHHHHHHHcCCCCChhhhhh
Confidence 999999999886543321 10 00000 11235668999999766899999
Q ss_pred ccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEE
Q 000517 337 NAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIIL 416 (1449)
Q Consensus 337 ~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~l 416 (1449)
+ ||+||||-|.||+|+..++++++|||||++|+...+..+++.++++.. .| ..++.++|..+|++++||+|.+
T Consensus 145 ~-----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~-~G-v~ii~ISHrl~Ei~~i~DritV 217 (500)
T COG1129 145 D-----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA-QG-VAIIYISHRLDEVFEIADRITV 217 (500)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CC-CEEEEEcCcHHHHHHhcCEEEE
Confidence 8 999999999999999999999999999999999999999999999975 34 4455567899999999999999
Q ss_pred EeCCeEEEecCh-hhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhHhHHH
Q 000517 417 MAEGKIVYHGPQ-DHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDE 495 (1449)
Q Consensus 417 L~~G~iv~~G~~-~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 495 (1449)
|.||+.+..++. ++.. .++.
T Consensus 218 lRDG~~v~~~~~~~~~~--------------------------------------------~~~l--------------- 238 (500)
T COG1129 218 LRDGRVVGTRPTAAETS--------------------------------------------EDEL--------------- 238 (500)
T ss_pred EeCCEEeeecccccCCC--------------------------------------------HHHH---------------
Confidence 999999876652 2110 0000
Q ss_pred HhcCcccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhh
Q 000517 496 ELLVPYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYY 575 (1449)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~ 575 (1449)
.
T Consensus 239 ----------------------------v--------------------------------------------------- 239 (500)
T COG1129 239 ----------------------------V--------------------------------------------------- 239 (500)
T ss_pred ----------------------------H---------------------------------------------------
Confidence 0
Q ss_pred hHHHHHHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHHHH
Q 000517 576 MGSLYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFF 655 (1449)
Q Consensus 576 ~g~lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~f~ 655 (1449)
-.|+|-.
T Consensus 240 ------------------------------------------------------------------~~MvGr~------- 246 (500)
T COG1129 240 ------------------------------------------------------------------RLMVGRE------- 246 (500)
T ss_pred ------------------------------------------------------------------HHhhCcc-------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHHHhhc
Q 000517 656 RQFILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFL 735 (1449)
Q Consensus 656 ~~~l~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~ 735 (1449)
.
T Consensus 247 ------------------------------------------------------------------------------~- 247 (500)
T COG1129 247 ------------------------------------------------------------------------------L- 247 (500)
T ss_pred ------------------------------------------------------------------------------h-
Confidence 0
Q ss_pred CCcccccCCCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhhhhhhcccccC
Q 000517 736 APRWQKMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQESEDS 815 (1449)
Q Consensus 736 ~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~~~~~~~~~~ 815 (1449)
..
T Consensus 248 ----~~-------------------------------------------------------------------------- 249 (500)
T COG1129 248 ----ED-------------------------------------------------------------------------- 249 (500)
T ss_pred ----hh--------------------------------------------------------------------------
Confidence 00
Q ss_pred CCCCCcccCCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecC
Q 000517 816 SYGEPVKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGV 895 (1449)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~ 895 (1449)
..... . . . ...+..+++++++. ...++||||++++||++||-|-
T Consensus 250 ~~~~~---~--~---~-----------~~~~~~l~v~~l~~-----------------~~~~~dvSf~vr~GEIlGiaGL 293 (500)
T COG1129 250 LFPEP---P--E---E-----------GIGEPVLEVRNLSG-----------------GGKVRDVSFTVRAGEILGIAGL 293 (500)
T ss_pred hcccc---c--c---c-----------CCCCcEEEEecCCC-----------------CCceeCceeEEeCCcEEEEecc
Confidence 00000 0 0 0 00011344555432 1147899999999999999999
Q ss_pred CCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc----ccccceEEEEccC---CCCCCCCCHHHHHHHHHHhccCC--C
Q 000517 896 SGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ----ETFARVSGYCEQT---DIHSPNITVEESVIFSAWLRLAP--E 966 (1449)
Q Consensus 896 sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~---d~~~~~lTv~e~l~f~~~lr~~~--~ 966 (1449)
=|||+|-|+++|.|.... .+|+|.+||.+... +..+..++||+.| +-+++.++|.+|+.++...+... -
T Consensus 294 vGaGRTEl~~~lfG~~~~--~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~ 371 (500)
T COG1129 294 VGAGRTELARALFGARPA--SSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGL 371 (500)
T ss_pred ccCCHHHHHHHHhCCCcC--CCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccc
Confidence 999999999999995443 48999999987532 3456679999976 45788999999998873322221 2
Q ss_pred CChHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 000517 967 INSKTKAEFVNEVLETIELDAI-KDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKN 1045 (1449)
Q Consensus 967 ~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~ 1045 (1449)
++....++.+++..+.+++... .+..+ ..||||++|||.|||.|..+|+||+|||||.|.|..+..+|.++|++
T Consensus 372 i~~~~e~~~~~~~~~~l~Ik~~s~~~~v-----~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~ 446 (500)
T COG1129 372 IDRRKERALAERYIRRLRIKTPSPEQPI-----GTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRE 446 (500)
T ss_pred cChHHHHHHHHHHHHhcCcccCCccchh-----hcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHH
Confidence 4556666788999999998642 23343 47999999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1046 IVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1046 l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
++++|++||++|-+.. |+...||||++|. +|+++-.=+.+
T Consensus 447 lA~~G~ail~iSSElp-Ell~~~DRIlVm~-~Gri~~e~~~~ 486 (500)
T COG1129 447 LAAEGKAILMISSELP-ELLGLSDRILVMR-EGRIVGELDRE 486 (500)
T ss_pred HHHCCCEEEEEeCChH-HHHhhCCEEEEEE-CCEEEEEeccc
Confidence 9999999999999975 8999999999998 58998755544
No 42
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=9.1e-52 Score=504.52 Aligned_cols=220 Identities=27% Similarity=0.336 Sum_probs=170.5
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCCCH
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTV 262 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 262 (1449)
.+++|+|+|+.+.+|+.++|+|+|||||||||++|+|...|+ +|+|...+ ..+++|++|+....+..||
T Consensus 15 ~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~tv 83 (530)
T COG0488 15 DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKTV 83 (530)
T ss_pred CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCccH
Confidence 356999999999999999999999999999999999999998 99998764 2379999999999999999
Q ss_pred HHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChH---HHHHH-HhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 263 RETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDID---TYMKA-ISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d---~~~~~-~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
.+.+.-+..- ..+...+..... ...++++.. .+... ....++..+.+++.+|..||++.. ++.+++
T Consensus 84 ~~~v~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~- 153 (530)
T COG0488 84 LDYVIEGFGE-----LRELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSS- 153 (530)
T ss_pred HHHHHhhhHH-----HHHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhh-
Confidence 9999765431 111111111111 111122111 11111 123346666788899999999887 888887
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
||||||.||+||++|+.+|++|+|||||++||..+..++-+.|++. .+ | ++.++|++..+-+.|++|+-++
T Consensus 154 ----LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~---~g-t-viiVSHDR~FLd~V~t~I~~ld 224 (530)
T COG0488 154 ----LSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY---PG-T-VIVVSHDRYFLDNVATHILELD 224 (530)
T ss_pred ----cCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC---CC-c-EEEEeCCHHHHHHHhhheEEec
Confidence 9999999999999999999999999999999999999988888763 33 4 4446789999999999999999
Q ss_pred CCeE-EEecChhhHH
Q 000517 419 EGKI-VYHGPQDHVL 432 (1449)
Q Consensus 419 ~G~i-v~~G~~~~~~ 432 (1449)
.|++ .|.|..+...
T Consensus 225 ~g~l~~y~Gny~~~~ 239 (530)
T COG0488 225 RGKLTPYKGNYSSYL 239 (530)
T ss_pred CCceeEecCCHHHHH
Confidence 9987 4777665443
No 43
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=7.7e-51 Score=518.61 Aligned_cols=200 Identities=17% Similarity=0.284 Sum_probs=157.3
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|+++.++ ++..+|+|+||+|++|++++|+|||||||||||++|+|...+ .+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p--~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQP--SSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCceEEECCc--
Confidence 467788876542 123589999999999999999999999999999999998665 5799998752
Q ss_pred ccccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHH
Q 000517 928 VQETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-IKDSLVGIPGVNGLSTEQR 1006 (1449)
Q Consensus 928 ~~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqr 1006 (1449)
..+||++|+.. ..+++.++..+......+ .. .++.+.++++.+++.+ ..+..+ ..||||||
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~-~~----~~~~i~~~L~~~gl~~~~~~~~~-----~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCFP-GV----PEQKLRAHLGSFGVTGNLALQPM-----YTLSGGQK 633 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhcC-CC----CHHHHHHHHHHCCCChHHhcCCc-----cccCHHHH
Confidence 35899999752 445666664332111111 11 1345788999999974 455554 37999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEE-EecC
Q 000517 1007 KRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRII-YCGP 1085 (1449)
Q Consensus 1007 qRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v-~~G~ 1085 (1449)
|||+||++|+.+|++|+|||||+|||+.+...+.+.|++. +.|||++||++. .+...+|++++|. +|+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~gtvIivSHd~~-~i~~~~drv~~l~-~G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF---QGGVLMVSHDEH-LISGSVDELWVVS-EGKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEeCCC
Confidence 9999999999999999999999999999999998888765 349999999986 4777899999997 58888 7776
Q ss_pred C
Q 000517 1086 L 1086 (1449)
Q Consensus 1086 ~ 1086 (1449)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 4
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=5.8e-50 Score=463.03 Aligned_cols=457 Identities=21% Similarity=0.354 Sum_probs=354.1
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCC----ceEEEEcCCCccCC
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPP----KTSAYISQNDLHIA 258 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 258 (1449)
...+++|||+.|++||+++|+|.||||||||+++|.|.++|+ +|+|.++|+++.-..|+ .-||+|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 467999999999999999999999999999999999999998 99999999988655543 46899999999999
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
++||.||+..+..-.... . +.+++ ....++.+.+.+||+-..|.+|++
T Consensus 93 ~lTV~ENiiLg~e~~~~~-~------~~~~~------------------------~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSKGG-L------IDRRQ------------------------ARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCcccccc-c------cCHHH------------------------HHHHHHHHHHHhCCCCCccceeec-
Confidence 999999999875421000 0 00000 112357788999999999999998
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
||-||||||.|-++|+.+|++|+|||||+-|-|....++++.|+++++ .|+|+|+ |+|-..|+.+.||++.+|.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~-~G~tIi~-ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA-EGKTIIF-ITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEE-EeccHHHHHHhhCeeEEEe
Confidence 999999999999999999999999999999999999999999999986 5777665 5688999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhcChhhhhhhhcccCCCCccCCHHHHHHHHhcChhhHhHHHHhc
Q 000517 419 EGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVLSRKDQAQFWLHTELPYSYFSVDMFSKKFKESPLVKKLDEELL 498 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 498 (1449)
.|+++-.-++ .++ .+.++.++
T Consensus 215 ~Gkvvgt~~~----------------~~~---------------------------~t~~ela~---------------- 235 (501)
T COG3845 215 RGKVVGTVDP----------------VAE---------------------------TTEEELAE---------------- 235 (501)
T ss_pred CCeEEeeecC----------------CCC---------------------------CCHHHHHH----------------
Confidence 9998643210 000 00000000
Q ss_pred CcccCCCCCCCccccCcccccHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhhhHH
Q 000517 499 VPYDKSKSPKNAISFSVYSLSRWELFKACMSRELLLMRRNSFVYVFKTTQLIMLATMAMTVFLRTRMEIDVFHGNYYMGS 578 (1449)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~vf~~~~~~~~~~~~~~~~g~ 578 (1449)
T Consensus 236 -------------------------------------------------------------------------------- 235 (501)
T COG3845 236 -------------------------------------------------------------------------------- 235 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhHHHHHHHHhhhhhHHHhhcccccchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcccHHHHHHHH
Q 000517 579 LYFSLVVLLVDGMPELSMTIQRLEVFYKQQELCFYPAWAYAIPATILKVPLSLVASLAWTCLTYYVIGYSPEVWRFFRQF 658 (1449)
Q Consensus 579 lff~~~~~~~~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~lP~~~~~~~i~~~i~Y~~~gl~~~~~~f~~~~ 658 (1449)
.|+|
T Consensus 236 ----------------------------------------------------------------lMvG------------ 239 (501)
T COG3845 236 ----------------------------------------------------------------LMVG------------ 239 (501)
T ss_pred ----------------------------------------------------------------HhcC------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHhhhccccCCChhHHHHHHHhHcHHHHHHHHHHHHhhcCCc
Q 000517 659 ILLFASHFTSISMFRFMASVFQTEFAAMTAGSVVILFVFLFGGFVISRPSMPAWLKWGFWISPVTYGEIGLSVNEFLAPR 738 (1449)
Q Consensus 659 l~l~l~~~~~~sl~~~i~a~~~~~~~a~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isp~~y~~~al~~nef~~~~ 738 (1449)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCccchhhhhccCCcccccchhHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccccchhhhhhhcccccCCCC
Q 000517 739 WQKMLPTNTTIGQEILESRGLNFDGFIFWISLGALFGIALLLNIGFTLALTFLKSSGSSRVMISHEKLAKMQESEDSSYG 818 (1449)
Q Consensus 739 ~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~~l~g~~~~f~i~~~laL~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~ 818 (1449)
.++. . ....
T Consensus 240 ------------~~v~-----------------------------------------------~------------~~~~ 248 (501)
T COG3845 240 ------------REVV-----------------------------------------------L------------RVVK 248 (501)
T ss_pred ------------Cccc-----------------------------------------------c------------cccc
Confidence 0000 0 0000
Q ss_pred CCcccCCCCCCCCCcccccCCccccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCC
Q 000517 819 EPVKENSRSTPMTNKESYKGRMVLPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGA 898 (1449)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGa 898 (1449)
. . . .++ ...++++|++..-+ .....+++|||++++||++||.|..|-
T Consensus 249 -~---~--~--------~pg-------~~vL~V~~L~v~~~------------~~~~~v~~vs~~Vr~GEIvGIAGV~GN 295 (501)
T COG3845 249 -P---P--S--------TPG-------EVVLEVEDLSVKDR------------RGVTAVKDVSFEVRAGEIVGIAGVAGN 295 (501)
T ss_pred -C---C--C--------CCC-------CeEEEEeeeEeecC------------CCCceeeeeeeEEecCcEEEEEecCCC
Confidence 0 0 0 001 12355666654321 124578999999999999999999999
Q ss_pred ChhHHHhhhcCCCCCCeeEEEEEEcCccC----cc-ccccceEEEEccCC---CCCCCCCHHHHHHHHHHhccC----CC
Q 000517 899 GKTTLMDVLAGRKTSGYVEGEIKISGYPK----VQ-ETFARVSGYCEQTD---IHSPNITVEESVIFSAWLRLA----PE 966 (1449)
Q Consensus 899 GKSTLl~~L~g~~~~~~~~G~I~i~G~~~----~~-~~~~~~~gyv~Q~d---~~~~~lTv~e~l~f~~~lr~~----~~ 966 (1449)
|-+.|+.+|+|..++ .+|+|.++|.+. .. ...+..+||||.|. .+.+.+|+.||+.+...-+.+ .-
T Consensus 296 GQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~ 373 (501)
T COG3845 296 GQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGF 373 (501)
T ss_pred CHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccc
Confidence 999999999998754 359999999985 22 23345789999876 346889999999876432211 12
Q ss_pred CChHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 000517 967 INSKTKAEFVNEVLETIELDAIK-DSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKN 1045 (1449)
Q Consensus 967 ~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~ 1045 (1449)
.......++..++++.++..... +.. .+.||||++||+-+||+|..+|++|+..+||.|||..+.+.|.+.|.+
T Consensus 374 l~~~~i~~~a~~li~~fdVr~~~~~~~-----a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e 448 (501)
T COG3845 374 LDRRAIRKFARELIEEFDVRAPSPDAP-----ARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLE 448 (501)
T ss_pred cCHHHHHHHHHHHHHHcCccCCCCCcc-----hhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHH
Confidence 34566778899999999886322 222 357999999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1046 IVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1046 l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
.++.|+.|++++-+.+ ++++.+|++.+|. +|+++...++.+
T Consensus 449 ~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~-~Gri~~~~~~~~ 489 (501)
T COG3845 449 LRDAGKAVLLISEDLD-EILELSDRIAVIY-EGRIVGIVPPEE 489 (501)
T ss_pred HHhcCCEEEEEehhHH-HHHHhhheeeeee-CCceeccccccc
Confidence 9999999999999987 7999999999998 589998888764
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-44 Score=377.33 Aligned_cols=207 Identities=27% Similarity=0.382 Sum_probs=185.0
Q ss_pred cccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc----cccccceEEEEccCCC
Q 000517 869 FADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV----QETFARVSGYCEQTDI 944 (1449)
Q Consensus 869 ~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~----~~~~~~~~gyv~Q~d~ 944 (1449)
+.++..++|+|||++|++||+++|+|||||||||||+||.|...+ .+|+|.++|.+.. -...|+.+|+|+|+..
T Consensus 10 K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~--~~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fn 87 (240)
T COG1126 10 KSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEP--DSGSITVDGEDVGDKKDILKLRRKVGMVFQQFN 87 (240)
T ss_pred EEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCC--CCceEEECCEeccchhhHHHHHHhcCeeccccc
Confidence 345678899999999999999999999999999999999998765 5899999996542 2357889999999999
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 945 HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 945 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
+||++||.||+.++...- ...++++.++...++|+.+||.+.+|... .+|||||||||+|||||+.+|+++++
T Consensus 88 LFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----~qLSGGQqQRVAIARALaM~P~vmLF 160 (240)
T COG1126 88 LFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAYP-----AQLSGGQQQRVAIARALAMDPKVMLF 160 (240)
T ss_pred ccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhCc-----cccCcHHHHHHHHHHHHcCCCCEEee
Confidence 999999999999875422 24567778888999999999999999884 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|||||+|||+...++.+.+++++++|.|.||+||+... ..+.+||++.|+ +|+++..|++
T Consensus 161 DEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd-~G~iie~g~p 220 (240)
T COG1126 161 DEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMD-QGKIIEEGPP 220 (240)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEee-CCEEEEecCH
Confidence 99999999999999999999999999999999999875 567899999997 5899999976
No 46
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=9.9e-42 Score=394.73 Aligned_cols=200 Identities=19% Similarity=0.259 Sum_probs=155.2
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|+++.++. +..++++++|-|.+++.+|++||||+|||||||++.|...| ..|.|.-.-+.
T Consensus 389 vi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p--~~G~vs~~~H~- 453 (614)
T KOG0927|consen 389 VIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQP--TIGMVSRHSHN- 453 (614)
T ss_pred eEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccc--ccccccccccc-
Confidence 4677888775532 12589999999999999999999999999999999998765 46776543322
Q ss_pred ccccccceEEEEccC--CCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHH
Q 000517 928 VQETFARVSGYCEQT--DIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI-KDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 928 ~~~~~~~~~gyv~Q~--d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgG 1004 (1449)
++++..|+ +.+.-..++-|++.=. ...+...+.+..++.++||+.. .+..+ +.||+|
T Consensus 454 -------~~~~y~Qh~~e~ldl~~s~le~~~~~--------~~~~~~~e~~r~ilgrfgLtgd~q~~p~-----~~LS~G 513 (614)
T KOG0927|consen 454 -------KLPRYNQHLAEQLDLDKSSLEFMMPK--------FPDEKELEEMRSILGRFGLTGDAQVVPM-----SQLSDG 513 (614)
T ss_pred -------cchhhhhhhHhhcCcchhHHHHHHHh--------ccccchHHHHHHHHHHhCCCccccccch-----hhcccc
Confidence 23444443 2333456677765421 1113455678899999999844 34443 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
||+||..|+.++..|.||+|||||+|||..+...+.++|.+. ..+||+++||... |-+.++++.+..+++...+.|
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~G 589 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWDG 589 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecCc
Confidence 999999999999999999999999999999999999999875 5689999999764 778899999998888888888
Q ss_pred CC
Q 000517 1085 PL 1086 (1449)
Q Consensus 1085 ~~ 1086 (1449)
..
T Consensus 590 ~i 591 (614)
T KOG0927|consen 590 DI 591 (614)
T ss_pred cH
Confidence 64
No 47
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-42 Score=359.82 Aligned_cols=221 Identities=24% Similarity=0.412 Sum_probs=186.4
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCC----CCCceEEEEcCCCccCC
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEF----VPPKTSAYISQNDLHIA 258 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv~Q~d~~~~ 258 (1449)
..++|+|||++|++||+++|+|||||||||||++|.|+..|+ +|+|.++|.++... ..|+.+|+|+|+..+||
T Consensus 14 ~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP 90 (240)
T COG1126 14 DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP 90 (240)
T ss_pred CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccc
Confidence 457999999999999999999999999999999999999998 99999999765321 23678999999999999
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
++||.||+..+...-. ..++.| .+....++|+.+||.+.+|.+.+.
T Consensus 91 HlTvleNv~lap~~v~---------~~~k~e------------------------A~~~A~~lL~~VGL~~ka~~yP~q- 136 (240)
T COG1126 91 HLTVLENVTLAPVKVK---------KLSKAE------------------------AREKALELLEKVGLADKADAYPAQ- 136 (240)
T ss_pred cchHHHHHHhhhHHHc---------CCCHHH------------------------HHHHHHHHHHHcCchhhhhhCccc-
Confidence 9999999998753211 111111 112345689999999999998876
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
|||||||||+|||||+.+|+++++|||||+|||....++.+.++++++. |-|.++. +|....+.+.+|||+.|+
T Consensus 137 ----LSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~e-GmTMivV-THEM~FAr~VadrviFmd 210 (240)
T COG1126 137 ----LSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEE-GMTMIIV-THEMGFAREVADRVIFMD 210 (240)
T ss_pred ----cCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHc-CCeEEEE-echhHHHHHhhheEEEee
Confidence 9999999999999999999999999999999999999999999999974 6677665 566888999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHH
Q 000517 419 EGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQE 454 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~e 454 (1449)
+|+++..|+++++ |..|.+....+|+..
T Consensus 211 ~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 211 QGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred CCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 9999999999887 456666556677654
No 48
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.3e-41 Score=392.91 Aligned_cols=213 Identities=32% Similarity=0.479 Sum_probs=188.2
Q ss_pred ccc-cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEccCCCCC
Q 000517 870 ADR-KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHS 946 (1449)
Q Consensus 870 ~~~-~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~ 946 (1449)
.++ ++.+|+||||+|++||++||+|||||||||||++|+|...+ .+|+|.++|.+... ...++.+||++|++.++
T Consensus 13 ~~~~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~ 90 (293)
T COG1131 13 KYGGDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDVVKEPAKVRRRIGYVPQEPSLY 90 (293)
T ss_pred EeCCCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeCccCHHHHHhheEEEccCCCCC
Confidence 345 47899999999999999999999999999999999998776 58999999987654 46678899999999999
Q ss_pred CCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000517 947 PNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1026 (1449)
Q Consensus 947 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDE 1026 (1449)
+.+||+|+|.|.+.++.... ...+++++++++.++|.+..++.++ +||+||||||+||+||+++|++|||||
T Consensus 91 ~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~~~-----~lS~G~kqrl~ia~aL~~~P~lliLDE 162 (293)
T COG1131 91 PELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKKVR-----TLSGGMKQRLSIALALLHDPELLILDE 162 (293)
T ss_pred ccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcchh-----hcCHHHHHHHHHHHHHhcCCCEEEECC
Confidence 99999999999999986542 4556789999999999986666654 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcC-CEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCCChhHHHHHHh
Q 000517 1027 PTTGLDARAAAIVMRAVKNIVNTG-RTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKHSSQVIEYFE 1098 (1449)
Q Consensus 1027 PTsgLD~~~~~~i~~~l~~l~~~g-~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~~~~~~~~~f~ 1098 (1449)
||+|||+.++..+++.|++++++| +||+++||+++ ++...||++++|. +|++++.|+. .++...+.
T Consensus 163 Pt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~-~G~~~~~g~~----~~l~~~~~ 229 (293)
T COG1131 163 PTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILN-DGKIIAEGTP----EELKEKFG 229 (293)
T ss_pred CCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEe-CCEEEEeCCH----HHHHHhhc
Confidence 999999999999999999999887 89999999987 6888899999998 5899999976 34555544
No 49
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.5e-42 Score=361.97 Aligned_cols=222 Identities=27% Similarity=0.398 Sum_probs=193.3
Q ss_pred ccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCC
Q 000517 870 ADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTD 943 (1449)
Q Consensus 870 ~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d 943 (1449)
..+.+.||+|||++|++||+++||||||+||||||++|.|...| .+|+|.++|.++.+ ...++++|+++|+-
T Consensus 17 ~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~g 94 (263)
T COG1127 17 SFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDIPQLSEEELYEIRKRMGVLFQQG 94 (263)
T ss_pred ecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcchhccCHHHHHHHHhheeEEeecc
Confidence 34667899999999999999999999999999999999998876 58999999988532 24678899999999
Q ss_pred CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000517 944 IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI-KDSLVGIPGVNGLSTEQRKRLTIAVELVANPSII 1022 (1449)
Q Consensus 944 ~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~il 1022 (1449)
.+|.++||+||+.|.. |.....+++..++.+..-|+.+||... .+.. +.+||||+|||+++||||+.+|+||
T Consensus 95 ALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsELSGGM~KRvaLARAialdPell 167 (263)
T COG1127 95 ALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSELSGGMRKRVALARAIALDPELL 167 (263)
T ss_pred ccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chhhcchHHHHHHHHHHHhcCCCEE
Confidence 9999999999999864 444456777888888889999999876 5554 4589999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC----ChhHHHHHH
Q 000517 1023 FMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK----HSSQVIEYF 1097 (1449)
Q Consensus 1023 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~----~~~~~~~~f 1097 (1449)
|+||||+||||.++..+.++|+++.++ |.|++++|||.+ +++..+|++++|. +|+++..|++++ ...-+.+||
T Consensus 168 ~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~-~gkv~~~Gt~~el~~sd~P~v~qf~ 245 (263)
T COG1127 168 FLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLA-DGKVIAEGTPEELLASDDPWVRQFF 245 (263)
T ss_pred EecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEe-CCEEEEeCCHHHHHhCCCHHHHHHh
Confidence 999999999999999999999999876 999999999986 6899999999998 589999999864 222367888
Q ss_pred hcCCC
Q 000517 1098 EGISG 1102 (1449)
Q Consensus 1098 ~~~~~ 1102 (1449)
.+..+
T Consensus 246 ~G~~~ 250 (263)
T COG1127 246 NGIRD 250 (263)
T ss_pred cCCCC
Confidence 87643
No 50
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-41 Score=372.77 Aligned_cols=203 Identities=27% Similarity=0.352 Sum_probs=183.5
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCCCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTDIHS 946 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d~~~ 946 (1449)
...+|+|||++|++||++||+|+||||||||++++.+...| .+|+|.+||.++.. +.+|+.+|+++|+..++
T Consensus 18 ~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~P--tsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLL 95 (339)
T COG1135 18 TVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERP--TSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLL 95 (339)
T ss_pred ceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCC--CCceEEEcCEecccCChHHHHHHHhhccEEecccccc
Confidence 35799999999999999999999999999999999998765 58999999976432 35678999999999999
Q ss_pred CCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000517 947 PNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1026 (1449)
Q Consensus 947 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDE 1026 (1449)
.+.||.||+.|...+.. .++++.+++|.++++.+||.+.++... .+|||||||||+|||||+.+|+||++||
T Consensus 96 ssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~yP-----~qLSGGQKQRVaIARALa~~P~iLL~DE 167 (339)
T COG1135 96 SSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRYP-----AQLSGGQKQRVAIARALANNPKILLCDE 167 (339)
T ss_pred ccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccCc-----hhcCcchhhHHHHHHHHhcCCCEEEecC
Confidence 99999999999877754 567888999999999999999888874 4899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1027 PTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1027 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
|||+|||.+...|.++|+++.++ |.|||++||+++ -+-+.|||+.+|. +|++++.|+..
T Consensus 168 aTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~-~G~lvE~G~v~ 227 (339)
T COG1135 168 ATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLD-QGRLVEEGTVS 227 (339)
T ss_pred ccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEee-CCEEEEeccHH
Confidence 99999999999999999999755 999999999986 3677899999997 59999999874
No 51
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-41 Score=367.69 Aligned_cols=218 Identities=29% Similarity=0.460 Sum_probs=184.7
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++++|++++++ ...+|+|||+++++|++++|+||||||||||+|+|.|..++ .+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~-------------~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p--~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG-------------NRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKP--SSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC-------------CEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcC--CcceEEEccccc
Confidence 467788877653 22599999999999999999999999999999999997765 589999999876
Q ss_pred ccccccceEEEEccCCCC--CCCCCHHHHHHHHHHhccC-CCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000517 928 VQETFARVSGYCEQTDIH--SPNITVEESVIFSAWLRLA-PEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 928 ~~~~~~~~~gyv~Q~d~~--~~~lTv~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1004 (1449)
....-+..+|||||...+ ..-+||+|-+..+..-+.. -....+..++.++++|+.+|+.+.+|+.+| .||||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGG 143 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIG-----ELSGG 143 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCccc-----ccCcH
Confidence 544445689999995422 2348999999876332221 011223446889999999999999999987 69999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
|+|||.|||||+++|++|+|||||+|+|+.++..++++|++++++|+||++++||++ .+.+.||+++.|+ +++++.|
T Consensus 144 Q~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~G 220 (254)
T COG1121 144 QKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIASG 220 (254)
T ss_pred HHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEecc
Confidence 999999999999999999999999999999999999999999988999999999997 5889999999996 5899999
Q ss_pred CCCC
Q 000517 1085 PLGK 1088 (1449)
Q Consensus 1085 ~~~~ 1088 (1449)
++++
T Consensus 221 ~~~~ 224 (254)
T COG1121 221 PPEE 224 (254)
T ss_pred Chhh
Confidence 9875
No 52
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.7e-41 Score=373.12 Aligned_cols=209 Identities=30% Similarity=0.438 Sum_probs=182.3
Q ss_pred cccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCCCCC
Q 000517 871 DRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSP 947 (1449)
Q Consensus 871 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~ 947 (1449)
++++.+|+|+||++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++.. +.+.+.+|||||.....+
T Consensus 12 y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p--~~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~ 89 (258)
T COG1120 12 YGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKP--KSGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPF 89 (258)
T ss_pred ECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCC--CCCEEEECCCchhhcCHHHHhhhEEEeccCCCCCC
Confidence 3457799999999999999999999999999999999997765 48999999988643 567889999999998888
Q ss_pred CCCHHHHHHHHHHhccCC-CCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000517 948 NITVEESVIFSAWLRLAP-EINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1026 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDE 1026 (1449)
.+||+|.+.++..-.... ....++..+.++++|+.+|+.+.+++.+. .||||||||+.|||||+++|+||+|||
T Consensus 90 ~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~~-----~LSGGerQrv~iArALaQ~~~iLLLDE 164 (258)
T COG1120 90 GLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPVD-----ELSGGERQRVLIARALAQETPILLLDE 164 (258)
T ss_pred CcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCccc-----ccChhHHHHHHHHHHHhcCCCEEEeCC
Confidence 999999999874322211 11234445579999999999999999865 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1027 PTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1027 PTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
|||+||...+..+++.++++++ +|+|||+++||++. ....+|++++|+ +|+++..|++.+
T Consensus 165 PTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk-~G~i~a~G~p~e 225 (258)
T COG1120 165 PTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLK-DGKIVAQGTPEE 225 (258)
T ss_pred CccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEE-CCeEEeecCcch
Confidence 9999999999999999999984 59999999999985 678999999998 589999999864
No 53
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-41 Score=370.06 Aligned_cols=223 Identities=26% Similarity=0.373 Sum_probs=194.2
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC------CceEEEEcCCCcc
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP------PKTSAYISQNDLH 256 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~ 256 (1449)
...+|+|||++|++|++.+|+|+||||||||++++.++-.|+ +|+|.++|.++..... |+.+|+++|+..+
T Consensus 18 ~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnL 94 (339)
T COG1135 18 TVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNL 94 (339)
T ss_pred ceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEeccccc
Confidence 467999999999999999999999999999999999999998 9999999988876542 5789999999999
Q ss_pred CCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccc
Q 000517 257 IAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVG 336 (1449)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 336 (1449)
+...||.||+.|..++.+... .+ .+.++.++|+.+||++.+|.+..
T Consensus 95 LssrTV~~NvA~PLeiag~~k----------~e------------------------i~~RV~elLelVgL~dk~~~yP~ 140 (339)
T COG1135 95 LSSRTVFENVAFPLELAGVPK----------AE------------------------IKQRVAELLELVGLSDKADRYPA 140 (339)
T ss_pred cccchHHhhhhhhHhhcCCCH----------HH------------------------HHHHHHHHHHHcCChhhhccCch
Confidence 999999999999988776321 11 12356789999999999999887
Q ss_pred ccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEE
Q 000517 337 NAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIIL 416 (1449)
Q Consensus 337 ~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~l 416 (1449)
+ |||||||||+|||||+.+|+|||+|||||+|||.|+..|++.|+++.++.|-|+|+. +|-.+-+-+.||||.+
T Consensus 141 q-----LSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlI-THEm~Vvk~ic~rVav 214 (339)
T COG1135 141 Q-----LSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLI-THEMEVVKRICDRVAV 214 (339)
T ss_pred h-----cCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEE-echHHHHHHHhhhheE
Confidence 6 999999999999999999999999999999999999999999999998888777765 4557788899999999
Q ss_pred EeCCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHhc
Q 000517 417 MAEGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEVL 456 (1449)
Q Consensus 417 L~~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev~ 456 (1449)
|++|+++++|+..++ |..|.+.-...|+.+..
T Consensus 215 m~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 215 LDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred eeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 999999999999888 44565555556665544
No 54
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.7e-36 Score=407.09 Aligned_cols=216 Identities=22% Similarity=0.352 Sum_probs=185.6
Q ss_pred cEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000517 847 LTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYP 926 (1449)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 926 (1449)
..++.+|++..++ .+++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~-----------~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~P--tsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFE-----------PSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPP--TSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEec-----------CCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCC--CceEEEECCEE
Confidence 3567777775542 1235699999999999999999999999999999999998765 58999999987
Q ss_pred Ccc--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000517 927 KVQ--ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 927 ~~~--~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1004 (1449)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++. ...++.++.++++++.+||.+..++.++ .||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~~-----~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEAQ-----DLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHH
Confidence 642 2356779999999999999999999999876653 2233445678999999999988888764 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
|||||+||+||+.+|+||+|||||+|||+.+++.+++.|++++ +|+|||++||+++ ++...+|++++|. +|+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~-~GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIIS-QGRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEec
Confidence 9999999999999999999999999999999999999999985 5999999999986 5677899999998 58999999
Q ss_pred CC
Q 000517 1085 PL 1086 (1449)
Q Consensus 1085 ~~ 1086 (1449)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 86
No 55
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-41 Score=358.28 Aligned_cols=207 Identities=26% Similarity=0.368 Sum_probs=186.1
Q ss_pred cccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCCC
Q 000517 869 FADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDIH 945 (1449)
Q Consensus 869 ~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~ 945 (1449)
+.++++.+++|+|++|++||+++++|||||||||+|++|.+...+ .+|+|.+||.++.. ..+|+.+|||-|+-.+
T Consensus 9 k~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiep--t~G~I~i~g~~i~~~d~~~LRr~IGYviQqigL 86 (309)
T COG1125 9 KRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEP--TSGEILIDGEDISDLDPVELRRKIGYVIQQIGL 86 (309)
T ss_pred hhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCC--CCceEEECCeecccCCHHHHHHhhhhhhhhccc
Confidence 344567899999999999999999999999999999999998775 58999999998654 4688999999999999
Q ss_pred CCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000517 946 SPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA--IKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIF 1023 (1449)
Q Consensus 946 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~ill 1023 (1449)
||++||.||+.+-..+. ..++++.+++++|+|+.+||++ ++++. +++|||||+|||.+||||+++|+||+
T Consensus 87 FPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSGGQQQRVGv~RALAadP~ilL 158 (309)
T COG1125 87 FPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSGGQQQRVGVARALAADPPILL 158 (309)
T ss_pred CCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCcchhhHHHHHHHHhcCCCeEe
Confidence 99999999998865553 4567888899999999999975 66666 45899999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1024 MDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1024 LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
||||.++|||-++..+++.++++.++ |+|||++|||.+ |.+.++|++.+|+ +|+++.++++.
T Consensus 159 MDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q~~~P~ 221 (309)
T COG1125 159 MDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQYDTPD 221 (309)
T ss_pred ecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEEeCCHH
Confidence 99999999999999999999999765 999999999986 7889999999998 68999999874
No 56
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-41 Score=361.68 Aligned_cols=192 Identities=28% Similarity=0.406 Sum_probs=171.9
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCHH
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVE 952 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~ 952 (1449)
...+|+|||++|++||+++|+||||||||||||+|+|..++ .+|+|.++|.+.. .....+|||+|++.++|.+||+
T Consensus 15 ~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p--~~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 15 GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKP--TSGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 36799999999999999999999999999999999998775 5899999998862 3345689999999999999999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000517 953 ESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLD 1032 (1449)
Q Consensus 953 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD 1032 (1449)
||+.++...+. .+++++.++++++|+.+||.+..|... .+|||||||||+|||||+.+|+||+||||.+.||
T Consensus 91 ~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~P-----~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgALD 162 (248)
T COG1116 91 DNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKYP-----HQLSGGMRQRVAIARALATRPKLLLLDEPFGALD 162 (248)
T ss_pred hhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcCc-----cccChHHHHHHHHHHHHhcCCCEEEEcCCcchhh
Confidence 99999877653 345566778999999999999998874 5899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 1033 ARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 1033 ~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
+.|+..+++.|.++.+ .++|||++|||.+ |...+.|||++|..+
T Consensus 163 alTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 163 ALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 9999999999999864 5899999999987 677889999999853
No 57
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-41 Score=354.48 Aligned_cols=214 Identities=30% Similarity=0.402 Sum_probs=182.9
Q ss_pred ccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCCCC
Q 000517 872 RKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTDIH 945 (1449)
Q Consensus 872 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d~~ 945 (1449)
+++++|+|||+.|++||++||+|+|||||||||++|.|...+ .+|+|.+||.++.. +.+|+.+||++|+..+
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~--t~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nL 92 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDP--TSGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNL 92 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCC--CcceEEecccchhccchHHHHHHHHhceeEeccCCc
Confidence 467899999999999999999999999999999999997654 58999999976422 3567889999999999
Q ss_pred CCCCCHHHHHHHHHHhccC-----CCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000517 946 SPNITVEESVIFSAWLRLA-----PEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPS 1020 (1449)
Q Consensus 946 ~~~lTv~e~l~f~~~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~ 1020 (1449)
.+.+||.+|++.+..-+.+ -....++.+..+-+.|+.+|+.+.+.+..+ .|||||+|||+|||||+.+|+
T Consensus 93 v~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra~-----~LSGGQQQRVaIARaL~Q~pk 167 (258)
T COG3638 93 VPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRAS-----TLSGGQQQRVAIARALVQQPK 167 (258)
T ss_pred ccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHhc-----cCCcchhHHHHHHHHHhcCCC
Confidence 9999999999876422111 123445556677889999999998888765 799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCCChhHHH
Q 000517 1021 IIFMDEPTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKHSSQVI 1094 (1449)
Q Consensus 1021 illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~~~~~~~ 1094 (1449)
|++.|||+++|||.+++.||+.|+++++ .|.|||++.||.+. ..++|||++-|+ .|+++|+||..+.+++.+
T Consensus 168 iILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~-~G~ivfDg~~~el~~~~~ 240 (258)
T COG3638 168 IILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK-AGRIVFDGPASELTDEAL 240 (258)
T ss_pred EEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec-CCcEEEeCChhhhhHHHH
Confidence 9999999999999999999999999975 48999999999875 568899999997 599999999876544433
No 58
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.7e-41 Score=343.19 Aligned_cols=201 Identities=28% Similarity=0.416 Sum_probs=184.8
Q ss_pred eeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEccCCCCCCCCCHH
Q 000517 875 RLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHSPNITVE 952 (1449)
Q Consensus 875 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lTv~ 952 (1449)
++++||||+++.||++||+|+|||||||+|++|++...| .+|.|.+||.+... ...++.+|.++.+..++..+|++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 489999999999999999999999999999999998776 58999999988533 45788999999888899999999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000517 953 ESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLD 1032 (1449)
Q Consensus 953 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD 1032 (1449)
|||.|.+.+.. ....+.+++++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|++++|||||||||
T Consensus 94 Enl~~Fa~L~~---l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLNG---LSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHhh---hhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 99999998763 4556778899999999999999999987 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1033 ARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1033 ~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
..+...+.+.++++.+.|++||++||..+ ++...||++++|. .|++++.|++.
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh-~Gevv~~gs~~ 218 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLH-KGEVVLEGSIE 218 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEe-cCcEEEcCCHH
Confidence 99999999999999888999999999975 7888999999998 58999999874
No 59
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.8e-40 Score=356.35 Aligned_cols=193 Identities=30% Similarity=0.460 Sum_probs=168.1
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------cc-ccceEEEEccCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ET-FARVSGYCEQTDIHS 946 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~-~~~~~gyv~Q~d~~~ 946 (1449)
..+|++||++|++||+++|||||||||||||++|.|...| .+|.|.++|.+... .. .++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999998766 58999999976432 12 345799999999999
Q ss_pred CCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccccc-ccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000517 947 PNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKD-SLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMD 1025 (1449)
Q Consensus 947 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLD 1025 (1449)
|++||+||+.+...+.... ....++.++++++.+||.+..+ ..+ .+|||||||||+|||||+.+|+||+.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~~---~~~~~~~~~~l~~~lgl~~~~~~~~p-----~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGKS---AGRRKRAAEELLEVLGLEDRLLKKKP-----SELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCCC---hhHHHHHHHHHHHhcCChhhhccCCc-----hhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 9999999999876554322 2255677899999999987665 543 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000517 1026 EPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGR 1079 (1449)
Q Consensus 1026 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~ 1079 (1449)
|||.+||+.++..|++.+++++++ |+|||++|||| ++...+||++.|.+ |+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~d-G~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKD-GK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeC-Ce
Confidence 999999999999999999999865 99999999997 57789999999985 66
No 60
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.3e-40 Score=379.67 Aligned_cols=212 Identities=32% Similarity=0.497 Sum_probs=185.1
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCC--CCCceEEEEcCCCccCCCC
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEF--VPPKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 260 (1449)
++.+|+|||+.+++|++++|+||||||||||||+|+|++.|+ +|+|.++|.+.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 357999999999999999999999999999999999999997 99999999887652 3357899999999999999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||+|||.|.+++++..... .+..++++++.+||++.+++.+++
T Consensus 94 T~~e~l~~~~~l~~~~~~~----------------------------------~~~~~~~~l~~~~L~~~~~~~~~~--- 136 (293)
T COG1131 94 TVRENLEFFARLYGLSKEE----------------------------------AEERIEELLELFGLEDKANKKVRT--- 136 (293)
T ss_pred cHHHHHHHHHHHhCCChhH----------------------------------HHHHHHHHHHHcCCchhhCcchhh---
Confidence 9999999999987643200 112467899999999866666655
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
+|+||||||+||.||+++|++|||||||+||||.++.++++.|+++++..+.|++++. |...++..+||+|++|++|
T Consensus 137 --lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvliss-H~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 137 --LSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLST-HILEEAEELCDRVIILNDG 213 (293)
T ss_pred --cCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeC-CcHHHHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999999986546777765 5567899999999999999
Q ss_pred eEEEecChhhHHHHHHh
Q 000517 421 KIVYHGPQDHVLAFFED 437 (1449)
Q Consensus 421 ~iv~~G~~~~~~~~F~~ 437 (1449)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999998776543
No 61
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3e-40 Score=364.84 Aligned_cols=209 Identities=31% Similarity=0.450 Sum_probs=181.6
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1449)
++||+|+|+.+++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.+... .+.+|||||.....+.+
T Consensus 15 ~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~ 91 (258)
T COG1120 15 KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGL 91 (258)
T ss_pred eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCc
Confidence 46999999999999999999999999999999999999998 9999999999877654 47899999999888999
Q ss_pred CHHHHHHHHHHcc-CCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccc
Q 000517 261 TVRETVDFSARCQ-GVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAM 339 (1449)
Q Consensus 261 TV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 339 (1449)
||+|-+.++..-. +... ..+ .++...++..|+.+|+.+.+++.+.+
T Consensus 92 tV~d~V~~GR~p~~~~~~------~~~-------------------------~~D~~~v~~aL~~~~~~~la~r~~~~-- 138 (258)
T COG1120 92 TVYELVLLGRYPHLGLFG------RPS-------------------------KEDEEIVEEALELLGLEHLADRPVDE-- 138 (258)
T ss_pred EEeehHhhcCCccccccc------CCC-------------------------HhHHHHHHHHHHHhCcHHHhcCcccc--
Confidence 9999999874321 1000 000 01122467789999999999999887
Q ss_pred cccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeC
Q 000517 340 RRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAE 419 (1449)
Q Consensus 340 ~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~ 419 (1449)
|||||||||.||+||+++|++|+||||||+||...+.++++.+++++++.+.|+|+++ |+...+.++||++++|++
T Consensus 139 ---LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vl-HDlN~A~ryad~~i~lk~ 214 (258)
T COG1120 139 ---LSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVL-HDLNLAARYADHLILLKD 214 (258)
T ss_pred ---cChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEe-cCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999999987788887765 567789999999999999
Q ss_pred CeEEEecChhhHH
Q 000517 420 GKIVYHGPQDHVL 432 (1449)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1449)
|+++.+|++++++
T Consensus 215 G~i~a~G~p~evl 227 (258)
T COG1120 215 GKIVAQGTPEEVL 227 (258)
T ss_pred CeEEeecCcchhc
Confidence 9999999988775
No 62
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-40 Score=360.08 Aligned_cols=207 Identities=29% Similarity=0.459 Sum_probs=186.3
Q ss_pred cccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCc---cCcc-ccccceEEEEccCCCCC
Q 000517 871 DRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGY---PKVQ-ETFARVSGYCEQTDIHS 946 (1449)
Q Consensus 871 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~---~~~~-~~~~~~~gyv~Q~d~~~ 946 (1449)
.+...+++|||+.|+.||++||+|||||||||||++|||..++ ..|.|.+||. +... ....|.+|||+|+..+|
T Consensus 12 ~~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF 89 (345)
T COG1118 12 FGAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALF 89 (345)
T ss_pred cccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcceeEEEechhhc
Confidence 3456789999999999999999999999999999999998876 5899999998 5433 33457899999999999
Q ss_pred CCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000517 947 PNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1026 (1449)
Q Consensus 947 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDE 1026 (1449)
+++||.+|+.|+..++ ...+++.+.+.+++++|+.++|++..+... .+|||||||||++||||+..|++|+|||
T Consensus 90 ~HmtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----~QLSGGQrQRVALARALA~eP~vLLLDE 163 (345)
T COG1118 90 PHMTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRYP-----AQLSGGQRQRVALARALAVEPKVLLLDE 163 (345)
T ss_pred ccchHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcCc-----hhcChHHHHHHHHHHHhhcCCCeEeecC
Confidence 9999999999998877 233456778889999999999999998874 5899999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1027 PTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1027 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
|.++||+.-+..+.+.|+++.+. |.|+|++|||+. +.++.+|++++|+ +|+|...||+.
T Consensus 164 Pf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~-~G~Ieqvg~p~ 223 (345)
T COG1118 164 PFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLN-QGRIEQVGPPD 223 (345)
T ss_pred CchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEec-CCeeeeeCCHH
Confidence 99999999999999999999876 999999999986 7999999999998 58999999975
No 63
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.1e-40 Score=374.33 Aligned_cols=217 Identities=28% Similarity=0.465 Sum_probs=193.0
Q ss_pred cccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCCHHH
Q 000517 186 ILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMTVRE 264 (1449)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 264 (1449)
+|+|+|++|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..| +|.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999998 9999999999999776 478999999999999999999
Q ss_pred HHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCC
Q 000517 265 TVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGIS 344 (1449)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlS 344 (1449)
|+.|+.+.++.... + .+.+++++.+.|+|++..|+++.. ||
T Consensus 95 Niaf~Lk~~~~~k~----------e------------------------i~~rV~eva~~L~l~~lL~r~P~~-----LS 135 (338)
T COG3839 95 NIAFGLKLRGVPKA----------E------------------------IDKRVKEVAKLLGLEHLLNRKPLQ-----LS 135 (338)
T ss_pred HhhhhhhhCCCchH----------H------------------------HHHHHHHHHHHcCChhHHhcCccc-----CC
Confidence 99999988754211 1 123567889999999999998765 99
Q ss_pred hhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEE
Q 000517 345 GGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVY 424 (1449)
Q Consensus 345 GGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~ 424 (1449)
|||||||++||||+.+|+++|||||+|.||...+.++...|+++.+..+.|+|. .+|+..|+..++|+|.+|++|+|..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IY-VTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIY-VTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEE-EcCCHHHHHhhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999999999987766655555 5678889999999999999999999
Q ss_pred ecChhhHHHHHHhcCCCCCCCCChhhHHH
Q 000517 425 HGPQDHVLAFFEDCGFRCPERKGVSDFLQ 453 (1449)
Q Consensus 425 ~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ 453 (1449)
.|++.++ |..|.+.-+|.|+-
T Consensus 215 ~g~p~el--------y~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLEL--------YERPANLFVAGFIG 235 (338)
T ss_pred cCChHHH--------hhCccchhhhhhcC
Confidence 9999998 45677777777753
No 64
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.2e-40 Score=374.72 Aligned_cols=206 Identities=27% Similarity=0.401 Sum_probs=185.9
Q ss_pred cccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-ccccceEEEEccCCCCCCCC
Q 000517 871 DRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-ETFARVSGYCEQTDIHSPNI 949 (1449)
Q Consensus 871 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-~~~~~~~gyv~Q~d~~~~~l 949 (1449)
+++..+|+|+|++|++||+++|+|||||||||||++|||...+ .+|+|.|+|.+.+. ...+|.+|+|+|+..++|++
T Consensus 13 yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~--~~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhm 90 (338)
T COG3839 13 FGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEP--TSGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHM 90 (338)
T ss_pred cCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCCCChhHCCEEEEeCCccccCCC
Confidence 3333399999999999999999999999999999999998765 58999999998765 34568899999999999999
Q ss_pred CHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000517 950 TVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTT 1029 (1449)
Q Consensus 950 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTs 1029 (1449)
||+||+.|+.+++. .++++.+++|+++.+.|+|++..|++. ++|||||||||+|||||+++|++++||||.|
T Consensus 91 tV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlS 162 (338)
T COG3839 91 TVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQRQRVALARALVRKPKVFLLDEPLS 162 (338)
T ss_pred cHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhHHHHHHHHHHhcCCCEEEecCchh
Confidence 99999999987764 356778899999999999999999985 4899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1030 GLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1030 gLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
+||+..+..+...|+++.++ |.|+|.+|||.. |...++|++.+|. +|++...|++.+
T Consensus 163 nLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~p~e 220 (338)
T COG3839 163 NLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGTPLE 220 (338)
T ss_pred HhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCChHH
Confidence 99999999999999998754 899999999974 8899999999998 699999999853
No 65
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=346.50 Aligned_cols=208 Identities=27% Similarity=0.430 Sum_probs=186.2
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCC
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAE 259 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 259 (1449)
++.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||+++.+... |+.+|||-|.--+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 456999999999999999999999999999999999999998 9999999999887654 7899999999999999
Q ss_pred CCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc--cccccccc
Q 000517 260 MTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV--CADTMVGN 337 (1449)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~--~~dt~vg~ 337 (1449)
+||.||+.+...+++.... +.+.+++++|+.+||+. .++++..+
T Consensus 90 ~Tv~eNIa~VP~L~~w~k~----------------------------------~i~~r~~ELl~lvgL~p~~~~~RyP~e 135 (309)
T COG1125 90 LTVAENIATVPKLLGWDKE----------------------------------RIKKRADELLDLVGLDPSEYADRYPHE 135 (309)
T ss_pred ccHHHHHHhhhhhcCCCHH----------------------------------HHHHHHHHHHHHhCCCHHHHhhcCchh
Confidence 9999999998777654321 01235788999999974 67777655
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
|||||+|||.+||||+.+|++++||||+++|||.++.++.+-++++.++.++|+|+. +|+.+|.+.++|||++|
T Consensus 136 -----LSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfV-THDidEA~kLadri~vm 209 (309)
T COG1125 136 -----LSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFV-THDIDEALKLADRIAVM 209 (309)
T ss_pred -----cCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEE-ecCHHHHHhhhceEEEe
Confidence 999999999999999999999999999999999999999999999988888887764 68899999999999999
Q ss_pred eCCeEEEecChhhHHH
Q 000517 418 AEGKIVYHGPQDHVLA 433 (1449)
Q Consensus 418 ~~G~iv~~G~~~~~~~ 433 (1449)
++|+++..+++++++.
T Consensus 210 ~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 210 DAGEIVQYDTPDEILA 225 (309)
T ss_pred cCCeEEEeCCHHHHHh
Confidence 9999999999999874
No 66
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.9e-40 Score=377.81 Aligned_cols=223 Identities=26% Similarity=0.451 Sum_probs=197.7
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCC
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 261 (1449)
...+|+|+|+.|++||+++|||||||||||||++|||+..|+ +|+|.++|++++...+ +|.+++|+|+-.+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 356999999999999999999999999999999999999998 9999999999988766 578999999999999999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+||+.|+.+.++...+. +.+.+++++|+.++|++.++.++..
T Consensus 94 V~~NVafGLk~~~~~~~~---------------------------------~i~~rv~e~L~lV~L~~~~~R~p~q---- 136 (352)
T COG3842 94 VEENVAFGLKVRKKLKKA---------------------------------EIKARVEEALELVGLEGFADRKPHQ---- 136 (352)
T ss_pred HHHHhhhhhhhcCCCCHH---------------------------------HHHHHHHHHHHHcCchhhhhhChhh----
Confidence 999999998844321110 0123578899999999999988876
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
|||||||||+|||||+.+|++||||||.|+||..-+.++..-|+++.++.|.|.|. ++|+..|.+.++|||++|++|+
T Consensus 137 -LSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~-VTHDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 137 -LSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVY-VTHDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred -hChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEE-EECCHHHHhhhccceEEccCCc
Confidence 99999999999999999999999999999999999999999999999887766665 5678899999999999999999
Q ss_pred EEEecChhhHHHHHHhcCCCCCCCCChhhHHHHh
Q 000517 422 IVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEV 455 (1449)
Q Consensus 422 iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev 455 (1449)
|...|+++++ |..|...-+|+|+-+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999999 5678888888887653
No 67
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=337.27 Aligned_cols=218 Identities=28% Similarity=0.369 Sum_probs=185.0
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCC---CCeeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKT---SGYVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~---~~~~~G~I~i~G 924 (1449)
.++.+|++.++ +++++|+|||+.|++++++||+|||||||||||++|..... .-.++|+|.++|
T Consensus 7 ~~~~~~l~~yY-------------g~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYY-------------GDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEE-------------CchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 45666776554 45789999999999999999999999999999999987432 235789999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc-ccccccCCCC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI-KDSLVGIPGV 998 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~ 998 (1449)
.++.. ..+|+.+|.|+|.+.-|| +|++||+.|+.++....+ ++.++.|++.|+...|.+- +|.+-.+ .
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s--a 147 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS--A 147 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--c
Confidence 87643 357899999999999999 999999999987765432 6778899999999988753 4444222 2
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000517 999 NGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGG 1078 (1449)
Q Consensus 999 ~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG 1078 (1449)
.+|||||+|||||||||+.+|+||+||||||+|||.+...|.++|.+++ +.-|||++||.+. ......|+...+. .|
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~-~G 224 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFY-LG 224 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhc-cc
Confidence 3699999999999999999999999999999999999999999999997 5789999999986 5678889999998 58
Q ss_pred EEEEecCCC
Q 000517 1079 RIIYCGPLG 1087 (1449)
Q Consensus 1079 ~~v~~G~~~ 1087 (1449)
+++++|+..
T Consensus 225 ~LvE~g~T~ 233 (253)
T COG1117 225 ELVEFGPTD 233 (253)
T ss_pred EEEEEcCHH
Confidence 999999973
No 68
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.6e-39 Score=330.36 Aligned_cols=200 Identities=27% Similarity=0.368 Sum_probs=175.7
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTDIHSP 947 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d~~~~ 947 (1449)
..+|+||||.|++||++-|+||||||||||||+|.+...+ ..|+|.++|+++.. ..+||++|+|+||..+.+
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~p--t~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~ 92 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERP--TRGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLP 92 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcC--CCceEEECCeecccccccccchhhheeeeEeeeccccc
Confidence 5699999999999999999999999999999999997665 58999999998542 236889999999999999
Q ss_pred CCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000517 948 NITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1027 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEP 1027 (1449)
+.||+||+.|...... .+..+.+++|.++|+.+||.+..+... .+|||||+|||+||||++.+|++|+.|||
T Consensus 93 ~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~lP-----~~LSGGEQQRvaIARAiV~~P~vLlADEP 164 (223)
T COG2884 93 DRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARALP-----SQLSGGEQQRVAIARAIVNQPAVLLADEP 164 (223)
T ss_pred cchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcCc-----cccCchHHHHHHHHHHHccCCCeEeecCC
Confidence 9999999999877653 345677889999999999999888763 48999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcC-eEEEEecCcEEEEecCC
Q 000517 1028 TTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFD-ELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1028 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d-~~~~l~~gG~~v~~G~~ 1086 (1449)
|.+||+..+..||+++.++...|.|||++||+. ++..... +++.|. +|+++.....
T Consensus 165 TGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~--~lv~~~~~rvl~l~-~Grl~~d~~~ 221 (223)
T COG2884 165 TGNLDPDLSWEIMRLFEEINRLGTTVLMATHDL--ELVNRMRHRVLALE-DGRLVRDESR 221 (223)
T ss_pred CCCCChHHHHHHHHHHHHHhhcCcEEEEEeccH--HHHHhccCcEEEEe-CCEEEecccc
Confidence 999999999999999999998999999999985 4555555 556665 6999987644
No 69
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-39 Score=344.83 Aligned_cols=216 Identities=25% Similarity=0.374 Sum_probs=183.3
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC------CceEEEEcCCCcc
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP------PKTSAYISQNDLH 256 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~ 256 (1449)
.+++|+|||+.|++||+++|+|||||||||||++|.|+.+|+ +|+|.+||.++..... ++.+||++|+..+
T Consensus 16 ~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nL 92 (258)
T COG3638 16 GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNL 92 (258)
T ss_pred CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCc
Confidence 357999999999999999999999999999999999999998 9999999988765542 4689999999999
Q ss_pred CCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccc
Q 000517 257 IAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVG 336 (1449)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 336 (1449)
.+.+||.+|+..+..-+.. ... .-.++.+.. .+..+-+.|+.+|+.+.+-++.+
T Consensus 93 v~r~sv~~NVl~grl~~~s--~~~---------slfglfsk~---------------dk~~Al~aLervgi~~~A~qra~ 146 (258)
T COG3638 93 VPRLSVLENVLLGRLGYTS--TWR---------SLFGLFSKE---------------DKAQALDALERVGILDKAYQRAS 146 (258)
T ss_pred ccccHHHHHHHhhhcccch--HHH---------HHhCCCCHH---------------HHHHHHHHHHHcCcHHHHHHHhc
Confidence 9999999999987532210 000 011111111 11234457899999999988888
Q ss_pred ccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEE
Q 000517 337 NAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIIL 416 (1449)
Q Consensus 337 ~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~l 416 (1449)
+ |||||+|||+|||||+.+|+++|-|||+++|||.++.++++.|++++...|.|+|+.+|| .+-+.++||||+-
T Consensus 147 ~-----LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~-vdlA~~Y~~Riig 220 (258)
T COG3638 147 T-----LSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQ-VDLAKKYADRIIG 220 (258)
T ss_pred c-----CCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEech-HHHHHHHHhhheE
Confidence 7 999999999999999999999999999999999999999999999999989999998766 6778899999999
Q ss_pred EeCCeEEEecChhhHHH
Q 000517 417 MAEGKIVYHGPQDHVLA 433 (1449)
Q Consensus 417 L~~G~iv~~G~~~~~~~ 433 (1449)
|++|+|+|+||++++.+
T Consensus 221 l~~G~ivfDg~~~el~~ 237 (258)
T COG3638 221 LKAGRIVFDGPASELTD 237 (258)
T ss_pred ecCCcEEEeCChhhhhH
Confidence 99999999999988754
No 70
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-39 Score=354.60 Aligned_cols=223 Identities=25% Similarity=0.454 Sum_probs=189.5
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCc---cCCCCC-CCceEEEEcCCCccCC
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGY---KLEEFV-PPKTSAYISQNDLHIA 258 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~---~~~~~~-~~~~~~yv~Q~d~~~~ 258 (1449)
...+++|||+.|+.||+++++|||||||||||++|||+..|+ +|+|.+||. +.+... ..|.+|||+|+..+|+
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 346899999999999999999999999999999999999998 999999999 555533 3478999999999999
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
+|||.+||.|+.+++..... + .+.+.+++++|+.+.|++.++.+.-.
T Consensus 91 HmtVa~NIAFGl~~~~~~p~-----~---------------------------~~~r~rv~elL~lvqL~~la~ryP~Q- 137 (345)
T COG1118 91 HMTVADNIAFGLKVRKERPS-----E---------------------------AEIRARVEELLRLVQLEGLADRYPAQ- 137 (345)
T ss_pred cchHHhhhhhcccccccCCC-----h---------------------------hhHHHHHHHHHHHhcccchhhcCchh-
Confidence 99999999999877621110 0 01233567889999999988887755
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
|||||||||++||||+..|++|+||||+++||...+.++-+.|+++....+.|++. ++|+.+|++++||+|++|+
T Consensus 138 ----LSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvf-VTHD~eea~~ladrvvvl~ 212 (345)
T COG1118 138 ----LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVF-VTHDQEEALELADRVVVLN 212 (345)
T ss_pred ----cChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEE-EeCCHHHHHhhcceEEEec
Confidence 99999999999999999999999999999999999999999999987765666555 5688899999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHH
Q 000517 419 EGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQE 454 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~e 454 (1449)
+|+|...||++++. ..|...-+..|+-+
T Consensus 213 ~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 213 QGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred CCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 99999999999984 45555555566544
No 71
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-39 Score=349.82 Aligned_cols=192 Identities=26% Similarity=0.441 Sum_probs=171.0
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCCCHH
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTVR 263 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 263 (1449)
..+|+|+|++|.+||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++. .+...++||+|++.++|.+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 56999999999999999999999999999999999999998 999999999883 4567899999999999999999
Q ss_pred HHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccC
Q 000517 264 ETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGI 343 (1449)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGl 343 (1449)
||+.|+...++.... | ...+++..|+.+||.+..|..... |
T Consensus 91 ~NV~l~l~~~~~~~~----------e------------------------~~~~a~~~L~~VgL~~~~~~~P~q-----L 131 (248)
T COG1116 91 DNVALGLELRGKSKA----------E------------------------ARERAKELLELVGLAGFEDKYPHQ-----L 131 (248)
T ss_pred hhheehhhccccchH----------h------------------------HHHHHHHHHHHcCCcchhhcCccc-----c
Confidence 999999887652211 1 112457789999999999988876 9
Q ss_pred ChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 344 SGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 344 SGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+..++|+++ ++|+.+|...++|||++|+++
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~Tvll-VTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLL-VTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEE-EeCCHHHHHhhhCEEEEecCC
Confidence 9999999999999999999999999999999999999999999998877777666 567889999999999999994
No 72
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.8e-39 Score=340.84 Aligned_cols=209 Identities=27% Similarity=0.382 Sum_probs=179.5
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC------CceEEEEcCCCcc
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP------PKTSAYISQNDLH 256 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~ 256 (1449)
.+.||+|||+.|++||+++|+|||||||||||++|.|+++|+ +|+|.++|+++..... ++++|+++|+-.+
T Consensus 20 ~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gAL 96 (263)
T COG1127 20 DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGAL 96 (263)
T ss_pred CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeecccc
Confidence 457999999999999999999999999999999999999998 9999999999866543 4679999999999
Q ss_pred CCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcc-ccccc
Q 000517 257 IAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVC-ADTMV 335 (1449)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~-~dt~v 335 (1449)
|..+||+||+.|..+-... +.+++. +..+..-|+..||... +|...
T Consensus 97 FssltV~eNVafplre~~~---------lp~~~i------------------------~~lv~~KL~~VGL~~~~~~~~P 143 (263)
T COG1127 97 FSSLTVFENVAFPLREHTK---------LPESLI------------------------RELVLMKLELVGLRGAAADLYP 143 (263)
T ss_pred ccccchhHhhheehHhhcc---------CCHHHH------------------------HHHHHHHHHhcCCChhhhhhCc
Confidence 9999999999997653321 111111 0112334788899876 77766
Q ss_pred cccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEE
Q 000517 336 GNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDII 415 (1449)
Q Consensus 336 g~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~ 415 (1449)
.+ ||||++||+++|||++.+|+++|+||||+||||.++..+.+.|+++.+..+.|+++. +|+.++++..+|+|+
T Consensus 144 sE-----LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~V-THDl~s~~~i~Drv~ 217 (263)
T COG1127 144 SE-----LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMV-THDLDSLLTIADRVA 217 (263)
T ss_pred hh-----hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEE-ECChHHHHhhhceEE
Confidence 65 999999999999999999999999999999999999999999999998877777664 677899999999999
Q ss_pred EEeCCeEEEecChhhHHH
Q 000517 416 LMAEGKIVYHGPQDHVLA 433 (1449)
Q Consensus 416 lL~~G~iv~~G~~~~~~~ 433 (1449)
+|.+|+|+++|+++++.+
T Consensus 218 ~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 218 VLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEeCCEEEEeCCHHHHHh
Confidence 999999999999999864
No 73
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.6e-39 Score=348.02 Aligned_cols=195 Identities=29% Similarity=0.457 Sum_probs=170.4
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-------CceEEEEcCCCcc
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-------PKTSAYISQNDLH 256 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 256 (1449)
.++|+++|+.|++||+++|+|||||||||||++|+|...|+ +|+|.++|.++..... ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 67999999999999999999999999999999999999998 9999999988876542 3579999999999
Q ss_pred CCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccc-ccc
Q 000517 257 IAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCAD-TMV 335 (1449)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d-t~v 335 (1449)
+|++||+||+.+...+.+.... + .+...+.+++.+||.+..+ +.+
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~----------~------------------------~~~~~~~l~~~lgl~~~~~~~~p 140 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG----------R------------------------RKRAAEELLEVLGLEDRLLKKKP 140 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh----------H------------------------HHHHHHHHHHhcCChhhhccCCc
Confidence 9999999999998776543211 0 1123567899999997666 777
Q ss_pred cccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEE
Q 000517 336 GNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDII 415 (1449)
Q Consensus 336 g~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~ 415 (1449)
.+ |||||||||+|||||+.+|++++.||||.+||+.++..|++.+++++++.++|+|+..|. +++...|||++
T Consensus 141 ~e-----LSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd--~~lA~~~dr~i 213 (226)
T COG1136 141 SE-----LSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHD--PELAKYADRVI 213 (226)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCC--HHHHHhCCEEE
Confidence 66 999999999999999999999999999999999999999999999998778888887654 57889999999
Q ss_pred EEeCCeE
Q 000517 416 LMAEGKI 422 (1449)
Q Consensus 416 lL~~G~i 422 (1449)
.|.+|++
T Consensus 214 ~l~dG~~ 220 (226)
T COG1136 214 ELKDGKI 220 (226)
T ss_pred EEeCCee
Confidence 9999994
No 74
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-39 Score=374.02 Aligned_cols=208 Identities=28% Similarity=0.427 Sum_probs=186.7
Q ss_pred ccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-ccccceEEEEccCCCCCCC
Q 000517 870 ADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-ETFARVSGYCEQTDIHSPN 948 (1449)
Q Consensus 870 ~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-~~~~~~~gyv~Q~d~~~~~ 948 (1449)
.+++..+|+|+|++|++||+++|+|||||||||||++|||...+ .+|+|.++|.++.. ...+|.+|+|+|+..+||+
T Consensus 14 ~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p--~~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPH 91 (352)
T COG3842 14 SFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQP--SSGEILLDGEDITDVPPEKRPIGMVFQSYALFPH 91 (352)
T ss_pred ecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCCCChhhcccceeecCcccCCC
Confidence 44567899999999999999999999999999999999998776 58999999998754 3457889999999999999
Q ss_pred CCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000517 949 ITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1028 (1449)
Q Consensus 949 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPT 1028 (1449)
+||.||+.|+.+++. ...+++.+++|+++++.++|++..++.+ .+|||||||||++||||+.+|++|+||||.
T Consensus 92 ltV~~NVafGLk~~~--~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----~qLSGGQqQRVALARAL~~~P~vLLLDEPl 164 (352)
T COG3842 92 MTVEENVAFGLKVRK--KLKKAEIKARVEEALELVGLEGFADRKP-----HQLSGGQQQRVALARALVPEPKVLLLDEPL 164 (352)
T ss_pred CcHHHHhhhhhhhcC--CCCHHHHHHHHHHHHHHcCchhhhhhCh-----hhhChHHHHHHHHHHHhhcCcchhhhcCcc
Confidence 999999999977443 3345667889999999999999988875 489999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1029 TGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1029 sgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
|+||..-+..+..-|+++.+ .|.|.|++|||.. +...+.||+.+|+ +|++...|++.+
T Consensus 165 SaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~-~G~I~Q~gtP~e 223 (352)
T COG3842 165 SALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMN-DGRIEQVGTPEE 223 (352)
T ss_pred cchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEcc-CCceeecCCHHH
Confidence 99999999999999999975 4999999999976 7889999999997 599999999853
No 75
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-38 Score=349.23 Aligned_cols=208 Identities=26% Similarity=0.423 Sum_probs=175.9
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCC--ccCCCCCH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQND--LHIAEMTV 262 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d--~~~~~lTV 262 (1449)
++|+|||+.+++|++++|+||||||||||+|+|.|+++|. +|+|.++|.+......+..+|||||.. .+-..+||
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV 94 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITV 94 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCH
Confidence 4899999999999999999999999999999999999998 999999999887776678999999953 23344899
Q ss_pred HHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccccc
Q 000517 263 RETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRG 342 (1449)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 342 (1449)
+|.+..+.--+.. ......++ +...++++|+.+|+.+.+|..+|+
T Consensus 95 ~d~V~~g~~~~~g-----~~~~~~~~-------------------------d~~~v~~aL~~Vgm~~~~~r~i~~----- 139 (254)
T COG1121 95 KDVVLLGRYGKKG-----WFRRLNKK-------------------------DKEKVDEALERVGMEDLRDRQIGE----- 139 (254)
T ss_pred HHHHHccCccccc-----ccccccHH-------------------------HHHHHHHHHHHcCchhhhCCcccc-----
Confidence 9999876321110 01111111 123478899999999999999998
Q ss_pred CChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeE
Q 000517 343 ISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKI 422 (1449)
Q Consensus 343 lSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~i 422 (1449)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|++.|+++.++ |+|+++ ++|+...+.++||+|+.|+. ++
T Consensus 140 LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e-g~tIl~-vtHDL~~v~~~~D~vi~Ln~-~~ 216 (254)
T COG1121 140 LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE-GKTVLM-VTHDLGLVMAYFDRVICLNR-HL 216 (254)
T ss_pred cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC-CCEEEE-EeCCcHHhHhhCCEEEEEcC-ee
Confidence 9999999999999999999999999999999999999999999999886 777766 57888899999999999965 78
Q ss_pred EEecChhhHHH
Q 000517 423 VYHGPQDHVLA 433 (1449)
Q Consensus 423 v~~G~~~~~~~ 433 (1449)
++.|+++++..
T Consensus 217 ~~~G~~~~~~~ 227 (254)
T COG1121 217 IASGPPEEVLT 227 (254)
T ss_pred EeccChhhccC
Confidence 89999988753
No 76
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.2e-38 Score=368.49 Aligned_cols=214 Identities=28% Similarity=0.416 Sum_probs=185.5
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|++..+ ++..+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~-------------~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p--~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRY-------------GDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHP--DAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEE-------------CCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEec
Confidence 46677766543 235699999999999999999999999999999999998765 589999999875
Q ss_pred cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000517 928 VQ--ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQ 1005 (1449)
Q Consensus 928 ~~--~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1005 (1449)
.. ...++.+|||+|++.+++.+||+||+.|.+.++. ....+..++++++++.++|.+..++.++ +|||||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKVG-----ELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCchh-----hCCHHH
Confidence 43 2356789999999999999999999998766542 2334445678899999999988888865 799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000517 1006 RKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGP 1085 (1449)
Q Consensus 1006 rqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~ 1085 (1449)
|||++||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|+ +|++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~-~G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIE-EGRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEECC
Confidence 99999999999999999999999999999999999999999877999999999986 6778899999998 589999998
Q ss_pred C
Q 000517 1086 L 1086 (1449)
Q Consensus 1086 ~ 1086 (1449)
+
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 6
No 77
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-39 Score=330.54 Aligned_cols=207 Identities=28% Similarity=0.367 Sum_probs=183.4
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC--CCceEEEEcCCCccCCCC
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV--PPKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 260 (1449)
..++++||||.++.||+++|+|||||||||+|++|++++.|+ +|+|++||.+..+.. .++.+|.++.+..++..|
T Consensus 14 ~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~Rl 90 (245)
T COG4555 14 KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARL 90 (245)
T ss_pred HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhh
Confidence 345899999999999999999999999999999999999998 999999999875432 368899999888899999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
|+||||.|.+++.+.. +.+ .+.+++.+.+.|+|.+|.|+.+|+
T Consensus 91 T~rEnl~~Fa~L~~l~----------~~~------------------------~kari~~l~k~l~l~~~~~rRv~~--- 133 (245)
T COG4555 91 TARENLKYFARLNGLS----------RKE------------------------IKARIAELSKRLQLLEYLDRRVGE--- 133 (245)
T ss_pred hHHHHHHHHHHHhhhh----------hhH------------------------HHHHHHHHHHHhChHHHHHHHHhh---
Confidence 9999999999876532 211 123567889999999999999997
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
+|-|+||||+|||||+++|+++++||||||||..+...+.+.++++.. .++++|.+ +|..+|+..+||+|++|++|
T Consensus 134 --~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~-egr~viFS-SH~m~EvealCDrvivlh~G 209 (245)
T COG4555 134 --FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN-EGRAVIFS-SHIMQEVEALCDRVIVLHKG 209 (245)
T ss_pred --hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc-CCcEEEEe-cccHHHHHHhhheEEEEecC
Confidence 999999999999999999999999999999999999999999999854 57777776 57799999999999999999
Q ss_pred eEEEecChhhHHH
Q 000517 421 KIVYHGPQDHVLA 433 (1449)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1449)
++++.|+.+++..
T Consensus 210 evv~~gs~~~l~~ 222 (245)
T COG4555 210 EVVLEGSIEALDA 222 (245)
T ss_pred cEEEcCCHHHHHH
Confidence 9999999988764
No 78
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-38 Score=331.11 Aligned_cols=222 Identities=27% Similarity=0.425 Sum_probs=178.5
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCeeeEEEECCccCCCCC-----CCceEEEEcCCCcc
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLD--PSLKVTGEVSYNGYKLEEFV-----PPKTSAYISQNDLH 256 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 256 (1449)
+.+|+|||+.|+++++||++|||||||||||++|....+ |..+++|+|.++|+++-+.. .|+++|+|+|.+..
T Consensus 20 ~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnP 99 (253)
T COG1117 20 KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNP 99 (253)
T ss_pred hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCC
Confidence 469999999999999999999999999999999988754 45688999999999985532 37899999999999
Q ss_pred CCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC-ccccccc
Q 000517 257 IAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD-VCADTMV 335 (1449)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~v 335 (1449)
|| +|++||+.|+.++.|... +.+.+ .++..|+.-+|- +..|.+=
T Consensus 100 Fp-~SIydNVayG~r~~g~~~--~~lde--------------------------------iVe~sLk~AaLWdEVKDrL~ 144 (253)
T COG1117 100 FP-MSIYDNVAYGLRLHGIKD--KELDE--------------------------------IVESSLKKAALWDEVKDRLH 144 (253)
T ss_pred CC-chHHHHHHHhHHhhccch--HHHHH--------------------------------HHHHHHHHhHhHHHhHHHhh
Confidence 99 999999999999887543 11111 122233333331 2233221
Q ss_pred cccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEE
Q 000517 336 GNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDII 415 (1449)
Q Consensus 336 g~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~ 415 (1449)
.+ ..+|||||+||++|||||+-+|+|||||||||+|||.++..|-+.+.++.+ +-|+|+ ++|...++.+..|+..
T Consensus 145 ~s--a~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~--~yTIvi-VTHnmqQAaRvSD~ta 219 (253)
T COG1117 145 KS--ALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK--KYTIVI-VTHNMQQAARVSDYTA 219 (253)
T ss_pred CC--ccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh--ccEEEE-EeCCHHHHHHHhHhhh
Confidence 12 346999999999999999999999999999999999999999999999864 456655 4677889999999999
Q ss_pred EEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHH
Q 000517 416 LMAEGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQ 453 (1449)
Q Consensus 416 lL~~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ 453 (1449)
++..|+++++|+.+++ |.-|.++.+.||+.
T Consensus 220 Ff~~G~LvE~g~T~~i--------F~~P~~~~TedYis 249 (253)
T COG1117 220 FFYLGELVEFGPTDKI--------FTNPKHKRTEDYIS 249 (253)
T ss_pred hhcccEEEEEcCHHhh--------hcCccHHHHHHHhc
Confidence 9999999999999988 45677776767653
No 79
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=7e-39 Score=329.16 Aligned_cols=213 Identities=24% Similarity=0.378 Sum_probs=187.9
Q ss_pred ccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccc----cccceEEEEcc
Q 000517 866 ERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQE----TFARVSGYCEQ 941 (1449)
Q Consensus 866 ~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~----~~~~~~gyv~Q 941 (1449)
+..+.+++++++++||+.+++||++||+|||||||||.+.++.|...+ .+|+|.+||.+++.. ..|..+||+||
T Consensus 9 ~l~K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~diT~lPm~~RArlGigYLpQ 86 (243)
T COG1137 9 NLAKSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDITKLPMHKRARLGIGYLPQ 86 (243)
T ss_pred hhhHhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCcccccCChHHHhhcCcccccc
Confidence 344567788999999999999999999999999999999999998776 489999999987542 23456899999
Q ss_pred CCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000517 942 TDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSI 1021 (1449)
Q Consensus 942 ~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~i 1021 (1449)
++..|..+||+||+......+.. +....+++++++++|+.+++.|++++... .||||||||+.|||||+.+|+.
T Consensus 87 E~SIFr~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a~-----sLSGGERRR~EIARaLa~~P~f 160 (243)
T COG1137 87 EASIFRKLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKAY-----SLSGGERRRVEIARALAANPKF 160 (243)
T ss_pred cchHhhcCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCccc-----ccccchHHHHHHHHHHhcCCCE
Confidence 99999999999999877666542 22334566778999999999999998743 6999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1022 IFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1022 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
++||||.+|+||-+...|.+.++.+++.|.-|++|-|... +....+||..++.+ |++...|++++
T Consensus 161 iLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~e 225 (243)
T COG1137 161 ILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPEE 225 (243)
T ss_pred EEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHHH
Confidence 9999999999999999999999999999999999999986 78899999999984 89999999853
No 80
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.1e-37 Score=366.48 Aligned_cols=202 Identities=25% Similarity=0.327 Sum_probs=177.6
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---c---cccceEEEEccCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---E---TFARVSGYCEQTDIHSP 947 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~---~~~~~~gyv~Q~d~~~~ 947 (1449)
..+|+||||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.++.. . ..++.+||++|+..+++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p--~~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~ 95 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP--TSGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLS 95 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccc
Confidence 4699999999999999999999999999999999998765 58999999987642 1 24668999999999999
Q ss_pred CCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000517 948 NITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1027 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEP 1027 (1449)
..||+||+.|..... ..+.++.++++.++++.+||.+..|..++ .|||||||||+|||||+.+|++|+||||
T Consensus 96 ~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~~~-----~LSgGqkQRV~IARAL~~~P~iLLlDEP 167 (343)
T TIGR02314 96 SRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSYPS-----NLSGGQKQRVAIARALASNPKVLLCDEA 167 (343)
T ss_pred cCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 999999999875543 22345566788999999999988887754 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1028 TTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1028 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
||+||+.++..+++.|++++++ |.|||++||+++ .+.+.||++++|+ +|++++.|+..
T Consensus 168 ts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~-~G~iv~~g~~~ 226 (343)
T TIGR02314 168 TSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVIS-NGELIEQGTVS 226 (343)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 9999999999999999999865 999999999976 5678899999997 58999999863
No 81
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-37 Score=351.43 Aligned_cols=202 Identities=28% Similarity=0.398 Sum_probs=174.1
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTDIHSP 947 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d~~~~ 947 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.+||++|++.+++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFD 90 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccChhhHHHHhcceEEEccCcccCC
Confidence 4699999999999999999999999999999999998665 58999999987532 234667999999999999
Q ss_pred CCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000517 948 NITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1027 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEP 1027 (1449)
.+||.||+.+...... ....+...+.++++++.++|.+..++.++ .|||||||||+||+||+.+|+||+||||
T Consensus 91 ~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~ia~al~~~p~llllDEP 163 (235)
T cd03261 91 SLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYPA-----ELSGGMKKRVALARALALDPELLLYDEP 163 (235)
T ss_pred CCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 9999999988643221 12334445678899999999887777654 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1028 TTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1028 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|. +|++++.|+.
T Consensus 164 t~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 221 (235)
T cd03261 164 TAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLY-DGKIVAEGTP 221 (235)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEE-CCeEEEecCH
Confidence 9999999999999999999764 899999999986 5777899999997 5899999875
No 82
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-37 Score=369.26 Aligned_cols=202 Identities=24% Similarity=0.358 Sum_probs=178.9
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-ccccceEEEEccCCCCCCCCCHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-ETFARVSGYCEQTDIHSPNITVE 952 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~ 952 (1449)
+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++.. ...++.+|||+|++.++|++||+
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p--~~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~ 94 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERI--TSGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVR 94 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHH
Confidence 5699999999999999999999999999999999998765 58999999987643 22346899999999999999999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000517 953 ESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLD 1032 (1449)
Q Consensus 953 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD 1032 (1449)
||+.|+...+ ..+..+..++++++++.++|.+..++.++ .|||||||||+|||||+.+|++|+||||||+||
T Consensus 95 eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD 166 (356)
T PRK11650 95 ENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKPR-----ELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLD 166 (356)
T ss_pred HHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 9999986543 23345556788999999999998888754 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1033 ARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1033 ~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
+.++..+.+.|+++.++ |.|+|++||++. ++...+|++++|. +|+++..|++.
T Consensus 167 ~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~-~G~i~~~g~~~ 220 (356)
T PRK11650 167 AKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMN-GGVAEQIGTPV 220 (356)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEEECCHH
Confidence 99999999999999765 999999999986 6889999999997 59999999874
No 83
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.8e-37 Score=367.33 Aligned_cols=214 Identities=25% Similarity=0.402 Sum_probs=185.8
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
++++|++.++ +.+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p--~~G~I~i~g~~~~ 69 (353)
T TIGR03265 5 LSIDNIRKRF-------------GAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQ--TAGTIYQGGRDIT 69 (353)
T ss_pred EEEEEEEEEe-------------CCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CceEEEECCEECC
Confidence 5666766543 235689999999999999999999999999999999998765 5899999998764
Q ss_pred c-ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000517 929 Q-ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRK 1007 (1449)
Q Consensus 929 ~-~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1007 (1449)
. ...+|.+|||+|+..++|++||+||+.|+...+ ..+..+.+++++++++.++|.+..++.+ ..|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~Q 141 (353)
T TIGR03265 70 RLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQQ 141 (353)
T ss_pred CCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHHH
Confidence 2 224577999999999999999999999986543 2334556678999999999999888775 479999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1008 RLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1008 Rl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|+ +|+++..|++
T Consensus 142 RvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~-~G~i~~~g~~ 219 (353)
T TIGR03265 142 RVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMN-HGVIEQVGTP 219 (353)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEE-CCEEEEEcCH
Confidence 999999999999999999999999999999999999998765 899999999986 6888999999998 5899999987
Q ss_pred C
Q 000517 1087 G 1087 (1449)
Q Consensus 1087 ~ 1087 (1449)
.
T Consensus 220 ~ 220 (353)
T TIGR03265 220 Q 220 (353)
T ss_pred H
Confidence 4
No 84
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.2e-37 Score=361.77 Aligned_cols=202 Identities=29% Similarity=0.436 Sum_probs=177.7
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEccCCCCCCCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHSPNIT 950 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lT 950 (1449)
++.+|+|+||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRP--TSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 45699999999999999999999999999999999998765 58999999987532 234567999999999999999
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000517 951 VEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTG 1030 (1449)
Q Consensus 951 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsg 1030 (1449)
|+||+.+.+.++. ......++.++++++.++|.+..++.++ .|||||||||+||+||+.+|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPVG-----TYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998765542 2233445678999999999988888764 7999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1031 LDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1031 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIID-HGRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 9999999999999999877999999999986 6778899999998 5899999986
No 85
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.4e-37 Score=364.55 Aligned_cols=214 Identities=25% Similarity=0.381 Sum_probs=185.3
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|++..+ +++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 41 ~i~i~nl~k~y-------------~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~~ 105 (340)
T PRK13536 41 AIDLAGVSKSY-------------GDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVPV 105 (340)
T ss_pred eEEEEEEEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEEC
Confidence 46777776544 345699999999999999999999999999999999998765 589999999875
Q ss_pred cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000517 928 VQ--ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQ 1005 (1449)
Q Consensus 928 ~~--~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1005 (1449)
.. ...++.+||++|++.+++.+||+|++.+.+.++. ....+..+.++++++.++|.+..++.++ +|||||
T Consensus 106 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~~-----~LS~G~ 177 (340)
T PRK13536 106 PARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARVS-----DLSGGM 177 (340)
T ss_pred CcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCChh-----hCCHHH
Confidence 42 2356789999999999999999999987665432 2233445667889999999988888865 799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000517 1006 RKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGP 1085 (1449)
Q Consensus 1006 rqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~ 1085 (1449)
|||++||+||+.+|++|||||||+|||+.++..+++.|+++++.|+|||++||+++ ++.+.||++++|. +|++++.|+
T Consensus 178 kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~-~G~i~~~g~ 255 (340)
T PRK13536 178 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLE-AGRKIAEGR 255 (340)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 6778999999998 589999998
Q ss_pred C
Q 000517 1086 L 1086 (1449)
Q Consensus 1086 ~ 1086 (1449)
+
T Consensus 256 ~ 256 (340)
T PRK13536 256 P 256 (340)
T ss_pred H
Confidence 6
No 86
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-37 Score=365.58 Aligned_cols=215 Identities=23% Similarity=0.396 Sum_probs=186.6
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|++..+ ++..+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.+||.++
T Consensus 6 ~l~~~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRF-------------GSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKP--TEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEE-------------CCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 46677776543 234689999999999999999999999999999999998765 589999999876
Q ss_pred ccc-cccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000517 928 VQE-TFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQR 1006 (1449)
Q Consensus 928 ~~~-~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1006 (1449)
... ..++.+|||+|+..++|++||+||+.|+...+. .+..+.+++++++++.++|.+..++.. ..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHH
Confidence 432 235789999999999999999999999865442 334566778999999999998888775 47999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000517 1007 KRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGP 1085 (1449)
Q Consensus 1007 qRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~ 1085 (1449)
|||+|||||+.+|++|+|||||||||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|+ +|+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~-~G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMN-KGKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEE-CCEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 6888999999998 589999998
Q ss_pred CC
Q 000517 1086 LG 1087 (1449)
Q Consensus 1086 ~~ 1087 (1449)
+.
T Consensus 221 ~~ 222 (351)
T PRK11432 221 PQ 222 (351)
T ss_pred HH
Confidence 74
No 87
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.4e-37 Score=363.64 Aligned_cols=206 Identities=23% Similarity=0.347 Sum_probs=178.4
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC------CceEEEEcCCCccC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP------PKTSAYISQNDLHI 257 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 257 (1449)
.++|+|||+++++||+++|+||||||||||+++|+|..+|+ +|+|.++|.++..... ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999998 9999999998865432 45799999999999
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGN 337 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 337 (1449)
+.+||+||+.|+....+... .+ ...++.++++.+||.+..|..++.
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------~~------------------------~~~~v~e~l~~vgL~~~~~~~~~~ 140 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------DE------------------------IKRKVTELLALVGLGDKHDSYPSN 140 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCchhhhCChhh
Confidence 99999999998765432110 00 012356789999999888888765
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
|||||||||+|||||+.+|++|+|||||++||+.++..+++.|+++.+..+.|+|++ +|..+.+.++||+|++|
T Consensus 141 -----LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiili-TH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 141 -----LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLI-THEMDVVKRICDCVAVI 214 (343)
T ss_pred -----CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999987557777765 45677888999999999
Q ss_pred eCCeEEEecChhhHH
Q 000517 418 AEGKIVYHGPQDHVL 432 (1449)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1449)
++|++++.|+++++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 88
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.8e-37 Score=364.63 Aligned_cols=205 Identities=24% Similarity=0.440 Sum_probs=179.0
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCCHH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMTVR 263 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 263 (1449)
.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|+..+||++||+
T Consensus 18 ~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv~ 94 (353)
T TIGR03265 18 TALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTVA 94 (353)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcHH
Confidence 4899999999999999999999999999999999999998 9999999998865433 46799999999999999999
Q ss_pred HHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccC
Q 000517 264 ETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGI 343 (1449)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGl 343 (1449)
||+.|+.+.++.. +.+ .+..++++++.+||++..|+.+.+ |
T Consensus 95 eNi~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~l~L~~~~~~~~~~-----L 135 (353)
T TIGR03265 95 DNIAYGLKNRGMG----------RAE------------------------VAERVAELLDLVGLPGSERKYPGQ-----L 135 (353)
T ss_pred HHHHHHHHhcCCC----------HHH------------------------HHHHHHHHHHHcCCCchhhCChhh-----C
Confidence 9999987543211 000 112357789999999988888765 9
Q ss_pred ChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEE
Q 000517 344 SGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIV 423 (1449)
Q Consensus 344 SGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv 423 (1449)
||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.+..+.|+|++. |...++..++|+|++|++|+++
T Consensus 136 SgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vT-Hd~~ea~~l~d~i~vl~~G~i~ 214 (353)
T TIGR03265 136 SGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVT-HDQEEALSMADRIVVMNHGVIE 214 (353)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEc-CCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998776567776654 5667999999999999999999
Q ss_pred EecChhhHH
Q 000517 424 YHGPQDHVL 432 (1449)
Q Consensus 424 ~~G~~~~~~ 432 (1449)
..|+++++.
T Consensus 215 ~~g~~~~~~ 223 (353)
T TIGR03265 215 QVGTPQEIY 223 (353)
T ss_pred EEcCHHHHH
Confidence 999998885
No 89
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.5e-37 Score=314.36 Aligned_cols=201 Identities=23% Similarity=0.425 Sum_probs=177.3
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCCHHHHHH
Q 000517 189 HVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMTVRETVD 267 (1449)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 267 (1449)
..++.|++||+++|+||||||||||||+|+|...|. +|+|.+||.+.....| +|-++.++|+..+|.++||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 478889999999999999999999999999999998 9999999999887665 577999999999999999999998
Q ss_pred HHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCChhh
Q 000517 268 FSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGISGGQ 347 (1449)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlSGGq 347 (1449)
++.. ++-+ +... ....++.++...||..+.+.+.+. |||||
T Consensus 94 LGl~---P~Lk------L~a~-------------------------~r~~v~~aa~~vGl~~~~~RLP~~-----LSGGq 134 (231)
T COG3840 94 LGLS---PGLK------LNAE-------------------------QREKVEAAAAQVGLAGFLKRLPGE-----LSGGQ 134 (231)
T ss_pred ccCC---cccc------cCHH-------------------------HHHHHHHHHHHhChhhHhhhCccc-----cCchH
Confidence 8642 1111 1111 123467789999999999999887 99999
Q ss_pred hhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEEecC
Q 000517 348 KKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVYHGP 427 (1449)
Q Consensus 348 rkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~~G~ 427 (1449)
||||++||+|+++.+||+||||+|+|||.-+.+....+.+++.+.+.|+++..||| +++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~-~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHP-EDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCH-HHHHHhhhceEEEeCCEEEeecc
Confidence 99999999999999999999999999999999999999999998888998887776 57889999999999999999999
Q ss_pred hhhHH
Q 000517 428 QDHVL 432 (1449)
Q Consensus 428 ~~~~~ 432 (1449)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 88765
No 90
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3e-37 Score=365.87 Aligned_cols=215 Identities=26% Similarity=0.372 Sum_probs=186.0
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeE--EEEEEcCc
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVE--GEIKISGY 925 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~--G~I~i~G~ 925 (1449)
.++++|+++++ ++..+|+|+|++|++||+++|+|||||||||||++|+|...+ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~-------------~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAY-------------GANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEE-------------CCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 35667776544 234699999999999999999999999999999999998765 47 99999998
Q ss_pred cCcc-ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000517 926 PKVQ-ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 926 ~~~~-~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1004 (1449)
+... ...++.+|||+|+..++|.+||+||+.|+...+ ..+..+.+++++++++.++|.+..++.++ .||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~~-----~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLPA-----QLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCChh-----hCCHH
Confidence 7532 223567999999999999999999999986543 23445566789999999999998888754 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc--CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT--GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIY 1082 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~--g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~ 1082 (1449)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|+ +|+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~-~G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMK-DGRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEE
Confidence 999999999999999999999999999999999999999999876 799999999986 6788999999998 589999
Q ss_pred ecCCC
Q 000517 1083 CGPLG 1087 (1449)
Q Consensus 1083 ~G~~~ 1087 (1449)
.|++.
T Consensus 220 ~g~~~ 224 (362)
T TIGR03258 220 HGEPQ 224 (362)
T ss_pred EcCHH
Confidence 99874
No 91
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-37 Score=362.62 Aligned_cols=206 Identities=26% Similarity=0.439 Sum_probs=179.4
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCCH
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMTV 262 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1449)
..+|+|+|+.+++||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|+..++|++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 35899999999999999999999999999999999999998 9999999998876544 4789999999999999999
Q ss_pred HHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccccc
Q 000517 263 RETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRG 342 (1449)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 342 (1449)
+||+.|+.+.++... .+ .+..++++++.+||.+..|..+.+
T Consensus 96 ~eNi~~~l~~~~~~~----------~~------------------------~~~~v~~~l~~~gl~~~~~r~~~~----- 136 (351)
T PRK11432 96 GENVGYGLKMLGVPK----------EE------------------------RKQRVKEALELVDLAGFEDRYVDQ----- 136 (351)
T ss_pred HHHHHHHHhHcCCCH----------HH------------------------HHHHHHHHHHHcCCchhhcCChhh-----
Confidence 999999876443211 00 012357789999999888887765
Q ss_pred CChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeE
Q 000517 343 ISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKI 422 (1449)
Q Consensus 343 lSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~i 422 (1449)
|||||||||+|||||+.+|++|+||||+++||+.++.++.+.|+++.+..+.|+|++ +|...++.+++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~v-THd~~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYV-THDQSEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEE-cCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999977556776665 5667889999999999999999
Q ss_pred EEecChhhHH
Q 000517 423 VYHGPQDHVL 432 (1449)
Q Consensus 423 v~~G~~~~~~ 432 (1449)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 92
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.4e-37 Score=314.57 Aligned_cols=196 Identities=28% Similarity=0.403 Sum_probs=172.5
Q ss_pred cceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-ccccceEEEEccCCCCCCCCCHHHHHHH
Q 000517 879 DVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-ETFARVSGYCEQTDIHSPNITVEESVIF 957 (1449)
Q Consensus 879 ~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~e~l~f 957 (1449)
..++.|.+||++||+||||||||||||+|+|...| .+|+|.|||.+... ....|-++.++|+..+|..+||++|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 46788999999999999999999999999998876 48999999988543 3455678999999999999999999987
Q ss_pred HHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000517 958 SAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAA 1037 (1449)
Q Consensus 958 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~ 1037 (1449)
+..-.+ .. ....++.++.++..+||..+.+++.+ +|||||||||++||+|+++-+||+||||.|.||+.-+.
T Consensus 95 Gl~P~L--kL-~a~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPGL--KL-NAEQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCccc--cc-CHHHHHHHHHHHHHhChhhHhhhCcc-----ccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 643211 11 24556789999999999999998855 79999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1038 IVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1038 ~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
++..++.++++ ++.|++++||+|+ +.....|++++++ +|||.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~-~Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLD-NGRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEe-CCEEEeeccH
Confidence 99999999975 4899999999997 7889999999998 5899999986
No 93
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-37 Score=341.53 Aligned_cols=199 Identities=30% Similarity=0.455 Sum_probs=170.5
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-ccccceEEEEccCCCCCCCCCHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-ETFARVSGYCEQTDIHSPNITVE 952 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~ 952 (1449)
+.+|+|+||++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+|++
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 90 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERP--DSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVA 90 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHH
Confidence 4699999999999999999999999999999999998654 58999999987532 22346799999999888899999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000517 953 ESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLD 1032 (1449)
Q Consensus 953 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD 1032 (1449)
||+.+...... ......++.++++++.++|.+..++.++ .||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 ~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD 162 (213)
T cd03259 91 ENIAFGLKLRG---VPKAEIRARVRELLELVGLEGLLNRYPH-----ELSGGQQQRVALARALAREPSLLLLDEPLSALD 162 (213)
T ss_pred HHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhcChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99988654321 2233445678899999999887777654 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1033 ARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1033 ~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
+.++..+++.|+++++ .|+|||+++|+++ ++.+.+|++++|. +|++++.|
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~-~G~i~~~g 213 (213)
T cd03259 163 AKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMN-EGRIVQVG 213 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEE-CCEEEecC
Confidence 9999999999999976 4899999999986 5678899999998 58888765
No 94
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-37 Score=341.20 Aligned_cols=200 Identities=28% Similarity=0.426 Sum_probs=173.1
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCHHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEE 953 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~e 953 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.. ..++.++|++|++.+++.+|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERP--TSGEVLVDGEPVT--GPGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECc--cccCcEEEEecccccccCCCHHH
Confidence 4699999999999999999999999999999999998654 5899999998754 24567999999998888899999
Q ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000517 954 SVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDA 1033 (1449)
Q Consensus 954 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~ 1033 (1449)
|+.+....+. ...+...+.++++++.++|.+..++.++ .||||||||++||+||+.+|++|+|||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAYPH-----QLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9988754432 2233445678899999999887777653 7999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEec-CcEEEEecCC
Q 000517 1034 RAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKT-GGRIIYCGPL 1086 (1449)
Q Consensus 1034 ~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~-gG~~v~~G~~ 1086 (1449)
.++..+++.|+++.+ .|+|||+++|+++ ++...+|++++|.+ +|+++..++.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999865 4899999999986 46788999999985 5899988875
No 95
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1e-36 Score=355.79 Aligned_cols=206 Identities=27% Similarity=0.373 Sum_probs=177.6
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC--CCceEEEEcCCCccCCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV--PPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1449)
..+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 35999999999999999999999999999999999999998 999999999875432 2467999999999999999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+||+.|.++..+.... + ....++.+++.+||.+..++.+++
T Consensus 97 v~e~l~~~~~~~~~~~~----------~------------------------~~~~~~~~l~~~~l~~~~~~~~~~---- 138 (306)
T PRK13537 97 VRENLLVFGRYFGLSAA----------A------------------------ARALVPPLLEFAKLENKADAKVGE---- 138 (306)
T ss_pred HHHHHHHHHHHcCCCHH----------H------------------------HHHHHHHHHHHcCCchHhcCchhh----
Confidence 99999987665432110 0 011246688999999989998875
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
|||||||||+||+||+++|++|+|||||+|||+.++..+.+.|+++.+ .+.|++++ +|..+++.++||+|++|++|+
T Consensus 139 -LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g~till~-sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 139 -LSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-RGKTILLT-THFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred -CCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEE-CCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999865 46777766 455778999999999999999
Q ss_pred EEEecChhhHHH
Q 000517 422 IVYHGPQDHVLA 433 (1449)
Q Consensus 422 iv~~G~~~~~~~ 433 (1449)
+++.|+++++.+
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999998864
No 96
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=7.3e-37 Score=341.04 Aligned_cols=195 Identities=25% Similarity=0.361 Sum_probs=167.5
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTDIHSP 947 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d~~~~ 947 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++.+++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKP--TRGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 3599999999999999999999999999999999998654 58999999987532 124567999999999999
Q ss_pred CCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000517 948 NITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1027 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEP 1027 (1449)
.+||.||+.+....+. .......+.++++++.++|.+..++.++ .||||||||++|||||+.+|++|+||||
T Consensus 94 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~laral~~~p~llllDEP 165 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALPM-----QLSGGEQQRVAIARAIVHKPPLLLADEP 165 (216)
T ss_pred cccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999988754331 2233445678899999999887777654 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEE
Q 000517 1028 TTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRI 1080 (1449)
Q Consensus 1028 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~ 1080 (1449)
|+|||+.++..+.+.|++++++|+|||++||+++ .+...+|++++|.+ |++
T Consensus 166 t~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~i 216 (216)
T TIGR00960 166 TGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GRL 216 (216)
T ss_pred CCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CcC
Confidence 9999999999999999999777999999999986 46678999999974 653
No 97
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=8.5e-37 Score=363.20 Aligned_cols=217 Identities=25% Similarity=0.400 Sum_probs=184.2
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCCHH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMTVR 263 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 263 (1449)
++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.++|++||+
T Consensus 28 ~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~ 104 (375)
T PRK09452 28 EVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVF 104 (375)
T ss_pred EEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHH
Confidence 5899999999999999999999999999999999999997 9999999998865433 46799999999999999999
Q ss_pred HHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccC
Q 000517 264 ETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGI 343 (1449)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGl 343 (1449)
||+.|+.+.++... .+ .+..++++++.+||++..|+.+.. |
T Consensus 105 eNi~~~l~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~p~~-----L 145 (375)
T PRK09452 105 ENVAFGLRMQKTPA----------AE------------------------ITPRVMEALRMVQLEEFAQRKPHQ-----L 145 (375)
T ss_pred HHHHHHHhhcCCCH----------HH------------------------HHHHHHHHHHHcCCchhhhCChhh-----C
Confidence 99999865432110 00 012356789999999888888765 9
Q ss_pred ChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEE
Q 000517 344 SGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIV 423 (1449)
Q Consensus 344 SGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv 423 (1449)
||||||||+|||||+.+|++||||||+++||..++.++.+.|+++.+..+.|+|++ +|...++..++|+|++|++|+++
T Consensus 146 SgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~v-THd~~ea~~laDri~vl~~G~i~ 224 (375)
T PRK09452 146 SGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFV-THDQEEALTMSDRIVVMRDGRIE 224 (375)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999987656676664 56678899999999999999999
Q ss_pred EecChhhHHHHHHhcCCCCCCCCChhhHH
Q 000517 424 YHGPQDHVLAFFEDCGFRCPERKGVSDFL 452 (1449)
Q Consensus 424 ~~G~~~~~~~~F~~~Gf~~p~~~~~adfl 452 (1449)
..|+++++. ..|...-+++|+
T Consensus 225 ~~g~~~~i~--------~~p~~~~~a~~~ 245 (375)
T PRK09452 225 QDGTPREIY--------EEPKNLFVARFI 245 (375)
T ss_pred EEcCHHHHH--------hCcccHHHHHhc
Confidence 999998874 345444445554
No 98
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-37 Score=364.12 Aligned_cols=206 Identities=27% Similarity=0.407 Sum_probs=178.9
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCCH
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMTV 262 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1449)
+.+|+|+|+.+++|++++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.++||+|++.++|++||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 35899999999999999999999999999999999999997 9999999998865433 4689999999999999999
Q ss_pred HHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccccc
Q 000517 263 RETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRG 342 (1449)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 342 (1449)
+||+.|+.+.++.. +.+ .+..++++++.+||++..|+.+++
T Consensus 94 ~eNi~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~----- 134 (356)
T PRK11650 94 RENMAYGLKIRGMP----------KAE------------------------IEERVAEAARILELEPLLDRKPRE----- 134 (356)
T ss_pred HHHHHhHHhhcCCC----------HHH------------------------HHHHHHHHHHHcCChhHhhCChhh-----
Confidence 99999987543211 000 012356789999999888888765
Q ss_pred CChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeE
Q 000517 343 ISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKI 422 (1449)
Q Consensus 343 lSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~i 422 (1449)
|||||||||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+..+.|+|++ +|...++..++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~v-THd~~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYV-THDQVEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999999877556676665 4566789999999999999999
Q ss_pred EEecChhhHH
Q 000517 423 VYHGPQDHVL 432 (1449)
Q Consensus 423 v~~G~~~~~~ 432 (1449)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999998874
No 99
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5.4e-37 Score=363.36 Aligned_cols=205 Identities=26% Similarity=0.396 Sum_probs=178.3
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-ccccceEEEEccCCCCCCCCCHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-ETFARVSGYCEQTDIHSPNITVE 952 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~ 952 (1449)
+.+|+|+|++|++||+++|+|||||||||||++|+|...+ .+|+|.++|.+... ...++.+|||+|++.++|.+||+
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~ 92 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQ--TSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVF 92 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHH
Confidence 4699999999999999999999999999999999998665 58999999987643 22346799999999999999999
Q ss_pred HHHHHHHHhccC-CCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000517 953 ESVIFSAWLRLA-PEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGL 1031 (1449)
Q Consensus 953 e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgL 1031 (1449)
||+.|....+.. ...+.++.+++++++++.++|.+..++.+. .|||||||||+|||||+.+|++|+|||||+||
T Consensus 93 eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----~LSgGq~QRvalArAL~~~P~llLLDEP~s~L 167 (353)
T PRK10851 93 DNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYPA-----QLSGGQKQRVALARALAVEPQILLLDEPFGAL 167 (353)
T ss_pred HHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCccC
Confidence 999997653211 122344556788999999999988887754 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1032 DARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1032 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
|+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|+ +|++++.|++.
T Consensus 168 D~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~-~G~i~~~g~~~ 222 (353)
T PRK10851 168 DAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMS-QGNIEQAGTPD 222 (353)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 999999999999999765 899999999986 6788999999998 58999999864
No 100
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-37 Score=330.17 Aligned_cols=199 Identities=26% Similarity=0.393 Sum_probs=169.5
Q ss_pred eeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccc----cccceEEEEccCCC--CCCC
Q 000517 875 RLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQE----TFARVSGYCEQTDI--HSPN 948 (1449)
Q Consensus 875 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~----~~~~~~gyv~Q~d~--~~~~ 948 (1449)
++|+|||++|++||++||+|+||||||||.++|+|...+ .+|+|.++|.+.... .+.+.+-+|+||+. +.|.
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~ 98 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPR 98 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCcccCccccchhhccceeEEecCCccccCcc
Confidence 599999999999999999999999999999999998765 589999999775432 46778999999984 6689
Q ss_pred CCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000517 949 ITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI-KDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1027 (1449)
Q Consensus 949 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEP 1027 (1449)
.||++.|.-..... ..++ ..+++.++++.+||.+- ++.. +.+||||||||++|||||+.+|++|+||||
T Consensus 99 ~tv~~~l~Epl~~~---~~~~--~~~~i~~~L~~VgL~~~~l~R~-----P~eLSGGQ~QRiaIARAL~~~PklLIlDEp 168 (252)
T COG1124 99 RTVGRILSEPLRPH---GLSK--SQQRIAELLDQVGLPPSFLDRR-----PHELSGGQRQRIAIARALIPEPKLLILDEP 168 (252)
T ss_pred hhHHHHHhhhhccC---CccH--HHHHHHHHHHHcCCCHHHHhcC-----chhcChhHHHHHHHHHHhccCCCEEEecCc
Confidence 99999887654331 2222 23348999999999763 3443 457999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1028 TTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1028 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
||+||+..+..|+++|.++.++ |.|.|+++||.+ -+...|||+++|. .|++++.+|.+
T Consensus 169 tSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~-~G~ivE~~~~~ 227 (252)
T COG1124 169 TSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMD-NGQIVEIGPTE 227 (252)
T ss_pred hhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeee-CCeEEEeechh
Confidence 9999999999999999999754 889999999987 4788899999998 58999999974
No 101
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=8.5e-37 Score=360.74 Aligned_cols=204 Identities=23% Similarity=0.324 Sum_probs=179.3
Q ss_pred ccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccc----cceEEEEccCCC
Q 000517 872 RKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETF----ARVSGYCEQTDI 944 (1449)
Q Consensus 872 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~----~~~~gyv~Q~d~ 944 (1449)
+.+.+|+|+||+|++||+++|+|||||||||||++|+|...+ .+|+|.++|.++.. ..+ ++.+|||+|+..
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p--~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEP--TAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCC--CceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 446699999999999999999999999999999999998765 58999999987643 222 568999999999
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 945 HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 945 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
++|++||+||+.|...+. ....++..+++.++++.+||.+..++.++ .|||||||||+|||||+.+|+||+|
T Consensus 82 l~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p~-----~LSGGq~QRV~lARAL~~~p~iLLl 153 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYPD-----ELSGGMQQRVGLARALAAEPDILLM 153 (363)
T ss_pred CCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999876543 23445566789999999999888887754 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
||||++||+.++..+++.++++.+. |+|||++||+++ ++...+|++++|. +|+++..|+++
T Consensus 154 DEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~-~G~iv~~g~~~ 215 (363)
T TIGR01186 154 DEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMK-AGEIVQVGTPD 215 (363)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEeeCCHH
Confidence 9999999999999999999999754 899999999986 5778899999997 58999999864
No 102
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-37 Score=341.68 Aligned_cols=202 Identities=29% Similarity=0.392 Sum_probs=174.2
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEccCCCCCCCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHSPNIT 950 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lT 950 (1449)
++.+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 12 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 12 DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKP--TSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 34699999999999999999999999999999999998654 58999999976432 234567999999999999999
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000517 951 VEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTG 1030 (1449)
Q Consensus 951 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsg 1030 (1449)
|+|++.+....+. ...++.++.++++++.++|.+..++.++ .||||||||++||+||+.+|++|+|||||+|
T Consensus 90 v~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qr~~la~al~~~p~llllDEPt~~ 161 (220)
T cd03265 90 GWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLVK-----TYSGGMRRRLEIARSLVHRPEVLFLDEPTIG 161 (220)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCccC
Confidence 9999988754432 2233445678999999999887777754 7999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1031 LDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1031 LD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|. +|+++..|+.
T Consensus 162 LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 216 (220)
T cd03265 162 LDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIID-HGRIIAEGTP 216 (220)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEEeCCh
Confidence 9999999999999999876 899999999986 5777899999997 5899998875
No 103
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=8e-37 Score=357.24 Aligned_cols=214 Identities=26% Similarity=0.386 Sum_probs=182.0
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|+++.+ ++..+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~-------------~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSY-------------GDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEe-------------CCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 35667766543 234699999999999999999999999999999999998655 589999999875
Q ss_pred cc--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000517 928 VQ--ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQ 1005 (1449)
Q Consensus 928 ~~--~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1005 (1449)
.. ...++.+||++|++.+++.+||+||+.+.+.... .......+.++++++.++|.+..++.++ .|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~~-----~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRVA-----LLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCchh-----hCCHHH
Confidence 32 2346779999999999999999999987554321 2233444567889999999988887764 799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000517 1006 RKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGP 1085 (1449)
Q Consensus 1006 rqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~ 1085 (1449)
|||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|. +|++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLE-SGRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEE-CCEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 5778899999997 589999998
Q ss_pred C
Q 000517 1086 L 1086 (1449)
Q Consensus 1086 ~ 1086 (1449)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 6
No 104
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1e-36 Score=361.24 Aligned_cols=205 Identities=24% Similarity=0.396 Sum_probs=178.2
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCee--eEEEECCccCCCCCC-CceEEEEcCCCccCCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVT--GEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~--G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 261 (1449)
.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ + |+|.++|+++....+ ++.++||+|+..++|++|
T Consensus 19 ~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~t 95 (362)
T TIGR03258 19 TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLK 95 (362)
T ss_pred EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCc
Confidence 5899999999999999999999999999999999999997 8 999999998865433 467999999999999999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+||+.|+.+..+... .+ .+..++++++.+||++..|+.+++
T Consensus 96 v~enl~~~l~~~~~~~----------~~------------------------~~~~v~~~l~~~gL~~~~~~~~~~---- 137 (362)
T TIGR03258 96 VEDNVAFGLRAQKMPK----------AD------------------------IAERVADALKLVGLGDAAAHLPAQ---- 137 (362)
T ss_pred HHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHhcCCCchhhCChhh----
Confidence 9999999875432110 00 012357789999999989888876
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcC-CcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHIT-DSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~-~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+.. +.|+|++ +|...++..++|+|++|++|
T Consensus 138 -LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~v-THd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 138 -LSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCV-THDQDDALTLADKAGIMKDG 215 (362)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEE-eCCHHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999987654 5566554 56678899999999999999
Q ss_pred eEEEecChhhHH
Q 000517 421 KIVYHGPQDHVL 432 (1449)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1449)
+++..|+++++.
T Consensus 216 ~i~~~g~~~~~~ 227 (362)
T TIGR03258 216 RLAAHGEPQALY 227 (362)
T ss_pred EEEEEcCHHHHH
Confidence 999999999884
No 105
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.9e-37 Score=372.34 Aligned_cols=216 Identities=23% Similarity=0.449 Sum_probs=178.7
Q ss_pred cCccccccccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEc
Q 000517 175 SGYKSLEAKINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYIS 251 (1449)
Q Consensus 175 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~ 251 (1449)
+.||.+ .+.+||+|+|++|+|||.+||+||||+||||+.++|..+++|+ +|+|++||+|+.+.++ ++.+|+|.
T Consensus 473 FaYP~R-p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~ 548 (716)
T KOG0058|consen 473 FAYPTR-PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVG 548 (716)
T ss_pred eecCCC-CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeee
Confidence 344544 3467999999999999999999999999999999999999998 9999999999998876 57899999
Q ss_pred CCCccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccc
Q 000517 252 QNDLHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCA 331 (1449)
Q Consensus 252 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 331 (1449)
|+|.+|. -||+|||.|+.. +.+.|+.+.++..+. ..+.+ .++++..
T Consensus 549 QEPvLFs-~sI~eNI~YG~~-------------------------~~t~e~i~~AAk~AN-----ah~FI---~~~p~gY 594 (716)
T KOG0058|consen 549 QEPVLFS-GSIRENIAYGLD-------------------------NATDEEIEAAAKMAN-----AHEFI---TNFPDGY 594 (716)
T ss_pred ccceeec-ccHHHHHhcCCC-------------------------CCCHHHHHHHHHHhC-----hHHHH---HhCcccc
Confidence 9999886 699999999753 112222222222211 12333 3489999
Q ss_pred cccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhc
Q 000517 332 DTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLF 411 (1449)
Q Consensus 332 dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~f 411 (1449)
||.||+... .||||||||++|||||+++|+||+|||.||+||+.+...+.+.|.++.+ ++|+++..| +-.+.+.+
T Consensus 595 ~T~VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlvIAH--RLSTV~~A 669 (716)
T KOG0058|consen 595 NTVVGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLVIAH--RLSTVRHA 669 (716)
T ss_pred ccccCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEEEeh--hhhHhhhc
Confidence 999997422 3999999999999999999999999999999999999999999998865 477776543 45688999
Q ss_pred CeEEEEeCCeEEEecChhhHHH
Q 000517 412 DDIILMAEGKIVYHGPQDHVLA 433 (1449)
Q Consensus 412 D~v~lL~~G~iv~~G~~~~~~~ 433 (1449)
|+|+++++|++++.|+++|+++
T Consensus 670 d~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 670 DQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred cEEEEEcCCeEEecccHHHHhh
Confidence 9999999999999999999975
No 106
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.3e-37 Score=338.67 Aligned_cols=198 Identities=25% Similarity=0.439 Sum_probs=171.3
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCHHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEE 953 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~e 953 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..++.++|++|++.+++.+|++|
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e 89 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILP--DSGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVID 89 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHH
Confidence 4699999999999999999999999999999999997654 58999999987543 34567999999999889999999
Q ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000517 954 SVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDA 1033 (1449)
Q Consensus 954 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~ 1033 (1449)
|+.+....+. .......+.++++++.++|.+..++.++ .||||||||++||++|+.+|++++|||||+|||+
T Consensus 90 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~ 161 (210)
T cd03269 90 QLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKRVE-----ELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDP 161 (210)
T ss_pred HHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCcHh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 9988654432 2233445678899999999887776643 7999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1034 RAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1034 ~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|. +|++++.|
T Consensus 162 ~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~-~g~i~~~~ 210 (210)
T cd03269 162 VNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLN-KGRAVLYG 210 (210)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEe-CCEEEecC
Confidence 9999999999999877899999999986 4667899999997 58988754
No 107
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1e-36 Score=360.04 Aligned_cols=207 Identities=22% Similarity=0.351 Sum_probs=180.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-------CceEEEEcCCCcc
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-------PKTSAYISQNDLH 256 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 256 (1449)
+.+|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 45899999999999999999999999999999999999998 9999999998876543 5689999999999
Q ss_pred CCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccc
Q 000517 257 IAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVG 336 (1449)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 336 (1449)
++++||+||+.|+....+... ++ ....+.++++.+||++..++.++
T Consensus 83 ~~~~TV~eNi~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~vgL~~~~~~~p~ 128 (363)
T TIGR01186 83 FPHMTILQNTSLGPELLGWPE----------QE------------------------RKEKALELLKLVGLEEYEHRYPD 128 (363)
T ss_pred CCCCCHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHhcCCchhhhCChh
Confidence 999999999999876543211 00 01235678999999988888887
Q ss_pred ccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEE
Q 000517 337 NAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIIL 416 (1449)
Q Consensus 337 ~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~l 416 (1449)
+ |||||||||+|||||+.+|++|||||||+|||+.++.++.+.++++.+..++|+|++ +|...++..++|+|++
T Consensus 129 ~-----LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~v-THd~~ea~~~~drI~v 202 (363)
T TIGR01186 129 E-----LSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFI-THDLDEAIRIGDRIVI 202 (363)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHhCCEEEE
Confidence 6 999999999999999999999999999999999999999999999876557777665 5667889999999999
Q ss_pred EeCCeEEEecChhhHHH
Q 000517 417 MAEGKIVYHGPQDHVLA 433 (1449)
Q Consensus 417 L~~G~iv~~G~~~~~~~ 433 (1449)
|++|+++..|+++++..
T Consensus 203 l~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 203 MKAGEIVQVGTPDEILR 219 (363)
T ss_pred EeCCEEEeeCCHHHHHh
Confidence 99999999999988753
No 108
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=9.3e-37 Score=362.87 Aligned_cols=214 Identities=24% Similarity=0.354 Sum_probs=185.4
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
++++|+++++. ++.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 15 L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i~ 79 (375)
T PRK09452 15 VELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETP--DSGRIMLDGQDIT 79 (375)
T ss_pred EEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 66777776542 34689999999999999999999999999999999998765 5899999998754
Q ss_pred c-ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000517 929 Q-ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRK 1007 (1449)
Q Consensus 929 ~-~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1007 (1449)
. ...++.+|||+|++.++|.+||.||+.|+...+. .+..+.++.++++++.++|.+..++.+. .|||||||
T Consensus 80 ~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~p~-----~LSgGq~Q 151 (375)
T PRK09452 80 HVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQK---TPAAEITPRVMEALRMVQLEEFAQRKPH-----QLSGGQQQ 151 (375)
T ss_pred CCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhCChh-----hCCHHHHH
Confidence 2 2235679999999999999999999999865432 2344556678999999999998888754 79999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1008 RLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1008 Rl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
||+|||||+.+|++|+|||||+|||..++..+.+.|+++.++ |.|+|++||++. ++...+|++++|. +|+++..|++
T Consensus 152 RVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~-~G~i~~~g~~ 229 (375)
T PRK09452 152 RVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMR-DGRIEQDGTP 229 (375)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCH
Confidence 999999999999999999999999999999999999999764 999999999986 6888999999998 5999999986
Q ss_pred C
Q 000517 1087 G 1087 (1449)
Q Consensus 1087 ~ 1087 (1449)
.
T Consensus 230 ~ 230 (375)
T PRK09452 230 R 230 (375)
T ss_pred H
Confidence 4
No 109
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-37 Score=339.02 Aligned_cols=214 Identities=28% Similarity=0.397 Sum_probs=186.5
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|++|+++. + ..+|+|+|+.|++||.++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 4 i~~~~l~~~y~~-----------~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG-----------R-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC-----------C-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeecc
Confidence 567777776532 1 4799999999999999999999999999999999998765 4799999998754
Q ss_pred ----cccccceEEEEccCCC-CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000517 929 ----QETFARVSGYCEQTDI-HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLST 1003 (1449)
Q Consensus 929 ----~~~~~~~~gyv~Q~d~-~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1003 (1449)
...+++.+|||+|++. .+..-||.|.+.|+.... ..+.++.+++++++++.+||.+.++... ..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRPP-----FNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCCc-----cccCC
Confidence 3467889999999974 345779999999986543 3455678899999999999999988774 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000517 1004 EQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIY 1082 (1449)
Q Consensus 1004 GqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~ 1082 (1449)
||||||+||.+|+.+|++|+|||||||||+.++..+++.++++.++ |+|||++|||.. .+...+|++++|+ +|++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~-~G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLD-DGKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEE-CCEEee
Confidence 9999999999999999999999999999999999999999999877 789999999986 5778899999998 589999
Q ss_pred ecCC
Q 000517 1083 CGPL 1086 (1449)
Q Consensus 1083 ~G~~ 1086 (1449)
.|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9985
No 110
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-36 Score=359.60 Aligned_cols=215 Identities=24% Similarity=0.370 Sum_probs=185.5
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++++|++..+ ++..+|+|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~-------------~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSF-------------DGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQP--TAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 46677776543 234689999999999999999999999999999999998765 489999999875
Q ss_pred cc-ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000517 928 VQ-ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQR 1006 (1449)
Q Consensus 928 ~~-~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1006 (1449)
.. ...++.+|||+|++.++|++||.||+.|+...+. .+..+.+++++++++.++|.+..++.+. +||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~l~L~~~~~~~~~-----~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQDK---LPKAEIASRVNEMLGLVHMQEFAKRKPH-----QLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHH
Confidence 32 2346789999999999999999999999765432 2345566788999999999988887754 7999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000517 1007 KRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGP 1085 (1449)
Q Consensus 1007 qRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~ 1085 (1449)
|||+|||||+.+|++|+|||||++||..++..+.+.|+++.+ .|.|+|++||+++ ++...+|++++|. +|+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~-~G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMN-RGKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEe-CCEEEEEcC
Confidence 999999999999999999999999999999999999999865 4899999999986 6889999999998 589999998
Q ss_pred CC
Q 000517 1086 LG 1087 (1449)
Q Consensus 1086 ~~ 1087 (1449)
+.
T Consensus 234 ~~ 235 (377)
T PRK11607 234 PE 235 (377)
T ss_pred HH
Confidence 74
No 111
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.4e-36 Score=343.47 Aligned_cols=204 Identities=29% Similarity=0.421 Sum_probs=173.3
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccc---c-ccceEEEEccCCCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQE---T-FARVSGYCEQTDIHSPNI 949 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~---~-~~~~~gyv~Q~d~~~~~l 949 (1449)
+.+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~ 90 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRP--TSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPEL 90 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEECCCCCHHHHHhcCEEEEecccccccCC
Confidence 4699999999999999999999999999999999998654 589999999875421 1 235689999999999999
Q ss_pred CHHHHHHHHHHhccCCC-------CChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000517 950 TVEESVIFSAWLRLAPE-------INSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSII 1022 (1449)
Q Consensus 950 Tv~e~l~f~~~lr~~~~-------~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~il 1022 (1449)
||+||+.+....+.... .......+.++++++.+||.+..++.++ .||||||||++||++|+.+|++|
T Consensus 91 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~ll 165 (236)
T cd03219 91 TVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAG-----ELSYGQQRRLEIARALATDPKLL 165 (236)
T ss_pred CHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChh-----hCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999988754322110 0123345678899999999887777653 79999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1023 FMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1023 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
+|||||+|||+.++..+++.|+++++.|+|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 166 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 227 (236)
T cd03219 166 LLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLD-QGRVIAEGTP 227 (236)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEe-CCEEEeecCH
Confidence 999999999999999999999999877999999999986 5678899999997 5899998875
No 112
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.8e-36 Score=337.14 Aligned_cols=199 Identities=27% Similarity=0.400 Sum_probs=170.9
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccc-cccceEEEEccCCCCCCCCCHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQE-TFARVSGYCEQTDIHSPNITVE 952 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~-~~~~~~gyv~Q~d~~~~~lTv~ 952 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.... ..++.++|++|++.+++..|++
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEP--TSGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 4699999999999999999999999999999999998654 589999999875321 2345799999999888899999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000517 953 ESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLD 1032 (1449)
Q Consensus 953 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD 1032 (1449)
||+.+....+. ....+.++.++++++.++|.+..+..++ .||||||||++||++|+.+|++++|||||+|||
T Consensus 91 ~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qr~~laral~~~p~llllDEPt~~LD 162 (213)
T cd03301 91 DNIAFGLKLRK---VPKDEIDERVREVAELLQIEHLLDRKPK-----QLSGGQRQRVALGRAIVREPKVFLMDEPLSNLD 162 (213)
T ss_pred HHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHHhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99988654321 2234445678899999999887777754 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1033 ARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1033 ~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
+.++..+++.|++++++ |+|||+++|++. ++...+|++++|. +|++++.|
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~-~g~~~~~g 213 (213)
T cd03301 163 AKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMN-DGQIQQIG 213 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEE-CCEEEecC
Confidence 99999999999999864 899999999986 5677899999997 58998876
No 113
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=3.7e-36 Score=337.56 Aligned_cols=205 Identities=36% Similarity=0.681 Sum_probs=172.8
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCC-CeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTS-GYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVE 952 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~-~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~ 952 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|.+......++.++|++|++.+++.+||+
T Consensus 20 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 99 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTVR 99 (226)
T ss_pred cccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccEEEeCCCCccCcCCcHH
Confidence 5699999999999999999999999999999999997651 125899999998765445677899999999999999999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHH-HHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000517 953 ESVIFSAWLRLAPEINSKTKAEFVNE-VLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGL 1031 (1449)
Q Consensus 953 e~l~f~~~lr~~~~~~~~~~~~~v~~-~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgL 1031 (1449)
||+.+..................+++ .++.+++.+..++.+ +.||||||||++|||+|+.+|++|+|||||+||
T Consensus 100 enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~illlDEP~~gL 174 (226)
T cd03234 100 ETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLV-----KGISGGERRRVSIAVQLLWDPKVLILDEPTSGL 174 (226)
T ss_pred HHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccc-----cCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCC
Confidence 99998765433221122223334555 899999987777654 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1032 DARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1032 D~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
|+.++..+.+.|+++.+.|.|+|+++|++..++.+.+|++++|. +|++++.|
T Consensus 175 D~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~-~G~i~~~g 226 (226)
T cd03234 175 DSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLS-SGEIVYSG 226 (226)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEe-CCEEEecC
Confidence 99999999999999887799999999998546889999999998 58998865
No 114
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.7e-36 Score=338.58 Aligned_cols=198 Identities=28% Similarity=0.479 Sum_probs=171.8
Q ss_pred eeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEccCCCCCCCCCHH
Q 000517 875 RLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHSPNITVE 952 (1449)
Q Consensus 875 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lTv~ 952 (1449)
.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++.+++.+||.
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 96 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEP--DAGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTAR 96 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHH
Confidence 699999999999999999999999999999999998654 58999999987542 23456799999999989999999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000517 953 ESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLD 1032 (1449)
Q Consensus 953 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD 1032 (1449)
||+.+....+. ....+..+.++++++.+||.+..++.++ .||||||||++|||+|+.+|++|+|||||+|||
T Consensus 97 e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~illlDEPt~~LD 168 (218)
T cd03266 97 ENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRRVG-----GFSTGMRQKVAIARALVHDPPVLLLDEPTTGLD 168 (218)
T ss_pred HHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhhhh-----hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCC
Confidence 99987654331 2334455678999999999887777654 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1033 ARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1033 ~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
+.++..+.+.|++++++|+|||++||++. ++...+|++++|. +|++++.|
T Consensus 169 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~-~G~i~~~~ 218 (218)
T cd03266 169 VMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLH-RGRVVYEG 218 (218)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEeecC
Confidence 99999999999999777999999999986 5778899999997 58888754
No 115
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2e-36 Score=341.41 Aligned_cols=203 Identities=26% Similarity=0.398 Sum_probs=173.9
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---cc-ccceEEEEccCCCCCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ET-FARVSGYCEQTDIHSPN 948 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~-~~~~~gyv~Q~d~~~~~ 948 (1449)
++.+|+|+||++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... .. .++.++|++|++.+++.
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 12 KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKP--DSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 34699999999999999999999999999999999998654 58999999987532 12 23568999999999999
Q ss_pred CCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000517 949 ITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1028 (1449)
Q Consensus 949 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPT 1028 (1449)
+|++||+.+....+. .......+.++++++.+++.+..++.++ .||||||||++||++|+.+|++|+|||||
T Consensus 90 ~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt 161 (232)
T cd03218 90 LTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSKAS-----SLSGGERRRVEIARALATNPKFLLLDEPF 161 (232)
T ss_pred CcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 999999987643321 2233445678899999999887777653 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1029 TGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1029 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
+|||+.++..+.+.|+++++.|+|||+++|+++ ++.+.+|++++|. +|++++.|+.+
T Consensus 162 ~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~~ 218 (232)
T cd03218 162 AGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIY-EGKVLAEGTPE 218 (232)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEEEeCHH
Confidence 999999999999999999877999999999986 5788899999997 58999988763
No 116
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.6e-36 Score=354.07 Aligned_cols=201 Identities=26% Similarity=0.419 Sum_probs=176.6
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEccCCCCCCCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHSPNIT 950 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lT 950 (1449)
++.+|+|+||++++||++||+|||||||||||++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 14 ~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~--~~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 14 TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPP--DSGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 35699999999999999999999999999999999998665 58999999987532 234567999999999999999
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000517 951 VEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTG 1030 (1449)
Q Consensus 951 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsg 1030 (1449)
|.||+.+.+.++. ...++..+.++++++.+||.+..++.++ .||||||||++||+||+.+|++|+|||||+|
T Consensus 92 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~lliLDEPt~g 163 (301)
T TIGR03522 92 VREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKIG-----QLSKGYRQRVGLAQALIHDPKVLILDEPTTG 163 (301)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999998776542 2234445678999999999988888764 7999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1031 LDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1031 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
||+.++..+++.|+++++ ++|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 164 LD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~-~G~i~~~g~~ 216 (301)
T TIGR03522 164 LDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIIN-KGKIVADKKL 216 (301)
T ss_pred CCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999864 799999999986 6788899999998 5899999986
No 117
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=358.72 Aligned_cols=218 Identities=24% Similarity=0.330 Sum_probs=183.1
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|++++++.. .+++.+|+|+||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p--~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERP--TSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 4567776654310 1135699999999999999999999999999999999998765 5899999998754
Q ss_pred c------ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000517 929 Q------ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLS 1002 (1449)
Q Consensus 929 ~------~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1002 (1449)
. ..+++.+||++|++.+++.+||+||+.+....+. ....+.++.++++++.+||.+..++.++ .||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRYPA-----QLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCChh-----hCC
Confidence 2 1235679999999999999999999998755432 2334455678999999999888777653 799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEE
Q 000517 1003 TEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRII 1081 (1449)
Q Consensus 1003 gGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v 1081 (1449)
||||||++|||||+.+|++|||||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.+|++++|+ +|+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~-~G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVID-AGRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 5777899999997 58999
Q ss_pred EecCCC
Q 000517 1082 YCGPLG 1087 (1449)
Q Consensus 1082 ~~G~~~ 1087 (1449)
+.|+..
T Consensus 221 ~~g~~~ 226 (343)
T PRK11153 221 EQGTVS 226 (343)
T ss_pred EEcCHH
Confidence 999863
No 118
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-36 Score=347.44 Aligned_cols=209 Identities=23% Similarity=0.306 Sum_probs=177.6
Q ss_pred ccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---cc----ccceEEE
Q 000517 866 ERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ET----FARVSGY 938 (1449)
Q Consensus 866 ~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~----~~~~~gy 938 (1449)
+..+.++++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... .. .++.++|
T Consensus 29 ~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~ 106 (269)
T cd03294 29 EILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKELRELRRKKISM 106 (269)
T ss_pred hhhhhcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhhhhhhcCcEEE
Confidence 444455667899999999999999999999999999999999998665 48999999987532 11 2357999
Q ss_pred EccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000517 939 CEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVAN 1018 (1449)
Q Consensus 939 v~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~ 1018 (1449)
++|++.+++.+||+||+.+...... .......+.++++++.++|.+..++.++ .||||||||++||+||+.+
T Consensus 107 v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Gq~qrv~lAral~~~ 178 (269)
T cd03294 107 VFQSFALLPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKYPD-----ELSGGMQQRVGLARALAVD 178 (269)
T ss_pred EecCcccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCcc-----cCCHHHHHHHHHHHHHhcC
Confidence 9999999989999999988654321 2233445678899999999888787754 7999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1019 PSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1019 p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|+||+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 179 p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~-~G~i~~~g~~ 245 (269)
T cd03294 179 PDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMK-DGRLVQVGTP 245 (269)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999999999999754 899999999986 5678899999997 5899999875
No 119
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-36 Score=339.92 Aligned_cols=206 Identities=27% Similarity=0.365 Sum_probs=172.7
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC------CCceEEEEcCCCccCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV------PPKTSAYISQNDLHIA 258 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 258 (1449)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++||+|++.+++
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (235)
T cd03261 14 TVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFD 90 (235)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccCC
Confidence 5899999999999999999999999999999999999997 999999998875432 2457999999999999
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
.+||+||+.++........ ..+ ....++.+++.+||.+..++.+++
T Consensus 91 ~~tv~~~l~~~~~~~~~~~---------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~- 136 (235)
T cd03261 91 SLTVFENVAFPLREHTRLS---------EEE------------------------IREIVLEKLEAVGLRGAEDLYPAE- 136 (235)
T ss_pred CCcHHHHHHHHHhhccCCC---------HHH------------------------HHHHHHHHHHHcCCchhhcCChhh-
Confidence 9999999988653211000 000 011245678999998877887765
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..++|+|++. |..+++.++||+|++|+
T Consensus 137 ----LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vs-H~~~~~~~~~d~v~~l~ 211 (235)
T cd03261 137 ----LSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVT-HDLDTAFAIADRIAVLY 211 (235)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEe-cCHHHHHHhcCEEEEEE
Confidence 9999999999999999999999999999999999999999999998764466766654 55668889999999999
Q ss_pred CCeEEEecChhhHH
Q 000517 419 EGKIVYHGPQDHVL 432 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1449)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (235)
T cd03261 212 DGKIVAEGTPEELR 225 (235)
T ss_pred CCeEEEecCHHHHc
Confidence 99999999987763
No 120
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=361.98 Aligned_cols=202 Identities=26% Similarity=0.396 Sum_probs=176.8
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-ccccceEEEEccCCCCCCCCCHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-ETFARVSGYCEQTDIHSPNITVE 952 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~ 952 (1449)
+.+|+|+|++|++||+++|+|||||||||||++|+|...+ .+|+|.++|.+... ...++.+||++|+..+++.+||+
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p--~~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~ 93 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDI--TSGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVA 93 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHH
Confidence 4699999999999999999999999999999999998765 58999999987532 12346799999999999999999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000517 953 ESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLD 1032 (1449)
Q Consensus 953 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD 1032 (1449)
||+.|....+. ....+.++.++++++.++|.+..++.++ .|||||||||+|||||+.+|++|+|||||+|||
T Consensus 94 eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~~-----~LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD 165 (369)
T PRK11000 94 ENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKPK-----ALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLD 165 (369)
T ss_pred HHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 99998765432 2334455778999999999988887754 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1033 ARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1033 ~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|. +|+++..|++.
T Consensus 166 ~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~-~G~i~~~g~~~ 219 (369)
T PRK11000 166 AALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLD-AGRVAQVGKPL 219 (369)
T ss_pred HHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 99999999999999765 899999999986 6788899999998 58999999864
No 121
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-36 Score=342.31 Aligned_cols=216 Identities=26% Similarity=0.384 Sum_probs=179.1
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERP--DSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 55667665442 34699999999999999999999999999999999998654 5899999998753
Q ss_pred cc-cccceEEEEccCCCCCCCCCHHHHHHHHHHhccCC-CCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHH
Q 000517 929 QE-TFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAP-EINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQR 1006 (1449)
Q Consensus 929 ~~-~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1006 (1449)
.. ..++.++|++|++.+++.+||+||+.+....+... ........+.++++++.++|.+..++.++ .||||||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYPA-----QLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcChh-----hCCHHHH
Confidence 21 22457999999998888999999998865432110 01223344567899999999887777654 7999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000517 1007 KRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGP 1085 (1449)
Q Consensus 1007 qRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~ 1085 (1449)
||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|. +|++++.|+
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~ 220 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMN-KGRIEQVGT 220 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEEecC
Confidence 9999999999999999999999999999999999999999865 899999999986 5678899999997 589999987
Q ss_pred C
Q 000517 1086 L 1086 (1449)
Q Consensus 1086 ~ 1086 (1449)
.
T Consensus 221 ~ 221 (239)
T cd03296 221 P 221 (239)
T ss_pred H
Confidence 5
No 122
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.3e-36 Score=336.02 Aligned_cols=192 Identities=29% Similarity=0.417 Sum_probs=164.0
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCC-CCCCCCHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDI-HSPNITVE 952 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~-~~~~lTv~ 952 (1449)
+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+......++.+||++|++. .+...|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKE--SSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 4699999999999999999999999999999999998664 58999999987643445567999999974 34467999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000517 953 ESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLD 1032 (1449)
Q Consensus 953 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD 1032 (1449)
||+.+..... . ...+.++++++.++|.+..++.++ .||||||||++|||+|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~--~-----~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKEL--D-----AGNEQAETVLKDLDLYALKERHPL-----SLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhc--C-----ccHHHHHHHHHHcCCchhcCCCch-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 9998754321 1 112467899999999988777654 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEE
Q 000517 1033 ARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRII 1081 (1449)
Q Consensus 1033 ~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v 1081 (1449)
+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|. +|+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~-~G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLA-NGAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEC
Confidence 99999999999999777999999999986 4667899999997 47764
No 123
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.3e-36 Score=363.26 Aligned_cols=206 Identities=28% Similarity=0.382 Sum_probs=177.3
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCCCCCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSPNI 949 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~l 949 (1449)
++.+|+|+||+|++||+++|+|||||||||||++|+|...+ .+|+|.++|.+... ..+++.+||++|++.+++.+
T Consensus 15 ~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p--~sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 15 DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTP--TAGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCC--CCcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 45799999999999999999999999999999999998665 58999999987542 34567899999999998999
Q ss_pred CHHHHHHHHHHhccCC-CCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000517 950 TVEESVIFSAWLRLAP-EINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1028 (1449)
Q Consensus 950 Tv~e~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPT 1028 (1449)
||+|++.++....... ....+..++.++++++.++|.+..++.+. .||||||||+.|||||+++|++|+|||||
T Consensus 93 tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~~-----~LSgGerQRv~IArAL~~~P~iLLLDEPt 167 (402)
T PRK09536 93 DVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPVT-----SLSGGERQRVLLARALAQATPVLLLDEPT 167 (402)
T ss_pred CHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHHHcCCCEEEEECCc
Confidence 9999998753211100 11123445678999999999988888754 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1029 TGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1029 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|+ +|++++.|+++
T Consensus 168 sgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~-~G~iv~~G~~~ 224 (402)
T PRK09536 168 ASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLA-DGRVRAAGPPA 224 (402)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEecCHH
Confidence 999999999999999999877999999999986 5778999999998 58999999875
No 124
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2e-36 Score=340.23 Aligned_cols=204 Identities=26% Similarity=0.337 Sum_probs=171.3
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCC-----CCCeeEEEEEEcCccCcc-----ccccceEEEEccC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRK-----TSGYVEGEIKISGYPKVQ-----ETFARVSGYCEQT 942 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~-----~~~~~~G~I~i~G~~~~~-----~~~~~~~gyv~Q~ 942 (1449)
++.+|+|+|++|++||+++|+||||||||||+++|+|.. .+ .+|+|.++|.+... ..+++.+||++|+
T Consensus 12 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 12 DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAP--DEGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCC--CCeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 346999999999999999999999999999999999976 43 58999999987532 2345679999999
Q ss_pred CCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000517 943 DIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSII 1022 (1449)
Q Consensus 943 d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~il 1022 (1449)
+.++ .+||+||+.+....+.. ......++.++++++.+||.+..+.... +.+||||||||++||++|+.+|++|
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~qrv~la~al~~~p~ll 163 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGI--KLKEELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQQRLCLARALANEPEVL 163 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 8887 79999999886543311 1122245678899999999876665531 2479999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1023 FMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1023 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
+|||||+|||+.++..+++.|++++++ +|||++||+++ ++.+.+|++++|. +|++++.|+..
T Consensus 164 llDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~~ 225 (227)
T cd03260 164 LLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLL-NGRLVEFGPTE 225 (227)
T ss_pred EEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEe-CCEEEEecCcc
Confidence 999999999999999999999999876 99999999986 5677899999997 58999998763
No 125
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.8e-36 Score=335.88 Aligned_cols=195 Identities=29% Similarity=0.433 Sum_probs=168.9
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-ccccceEEEEccCCCCCCCCCHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-ETFARVSGYCEQTDIHSPNITVE 952 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~ 952 (1449)
+.+|+|+||++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKP--DSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTAR 90 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCCcccchHHHHhhEEEecCCCccCccCcHH
Confidence 4699999999999999999999999999999999998654 58999999987532 23456799999999888999999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000517 953 ESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLD 1032 (1449)
Q Consensus 953 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD 1032 (1449)
||+.+....+. . .++.++++++.++|.+..++.++ .||||||||++||++|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~llllDEPt~~LD 158 (208)
T cd03268 91 ENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKVK-----GFSLGMKQRLGIALALLGNPDLLILDEPTNGLD 158 (208)
T ss_pred HHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhHh-----hCCHHHHHHHHHHHHHhcCCCEEEECCCcccCC
Confidence 99988654321 1 13457889999999887777654 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1033 ARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1033 ~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
+.++..+.+.|++++++|+|||++||++. ++.+.+|++++|. +|++++.|
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~-~g~i~~~g 208 (208)
T cd03268 159 PDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIIN-KGKLIEEG 208 (208)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEE-CCEEEecC
Confidence 99999999999998877999999999986 4667899999998 58988765
No 126
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-36 Score=321.89 Aligned_cols=206 Identities=24% Similarity=0.405 Sum_probs=176.4
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIAE 259 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1449)
.++|+|||+++++||+++|+||||+||||||++|+|..++. +|+|.++|++++...+ ++-++||||....|+.
T Consensus 16 ~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~ 92 (237)
T COG0410 16 IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPR 92 (237)
T ss_pred eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhh
Confidence 57999999999999999999999999999999999999987 9999999999987655 4568999999999999
Q ss_pred CCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhC-CCcccccccccc
Q 000517 260 MTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILG-LDVCADTMVGNA 338 (1449)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lg-L~~~~dt~vg~~ 338 (1449)
|||+|||..++..+... . .. ....|.+.+.|- |.+..+++-|+
T Consensus 93 LTVeENL~~g~~~~~~~-~----------~~------------------------~~~~e~v~~lFP~Lker~~~~aG~- 136 (237)
T COG0410 93 LTVEENLLLGAYARRDK-E----------AQ------------------------ERDLEEVYELFPRLKERRNQRAGT- 136 (237)
T ss_pred CcHHHHHhhhhhccccc-c----------cc------------------------cccHHHHHHHChhHHHHhcCcccC-
Confidence 99999999876433110 0 00 001344555554 55667777777
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
|||||||-++|||||+++|++|+|||||.||-|.-..+|.+.|+++.+..+ .+|+.+.|....+.+++|+.++|.
T Consensus 137 ----LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g-~tIlLVEQn~~~Al~iaDr~yvle 211 (237)
T COG0410 137 ----LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGG-MTILLVEQNARFALEIADRGYVLE 211 (237)
T ss_pred ----CChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCC-cEEEEEeccHHHHHHhhCEEEEEe
Confidence 999999999999999999999999999999999999999999999987544 556667999999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 000517 419 EGKIVYHGPQDHVLA 433 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1449)
+|+|++.|+.+++.+
T Consensus 212 ~Griv~~G~~~eL~~ 226 (237)
T COG0410 212 NGRIVLSGTAAELLA 226 (237)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999998863
No 127
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-36 Score=326.31 Aligned_cols=212 Identities=27% Similarity=0.389 Sum_probs=184.4
Q ss_pred ccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc----ccccceEEEEccCC
Q 000517 868 GFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ----ETFARVSGYCEQTD 943 (1449)
Q Consensus 868 ~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d 943 (1449)
++..+...+++|||+++++||++||+||||||||||+|+|+|..+| .+|+|.++|.++.. +..+..++--+|..
T Consensus 11 ~k~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~ 88 (250)
T COG0411 11 SKRFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDITGLPPHRIARLGIARTFQIT 88 (250)
T ss_pred eeecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccCCCCHHHHHhccceeecccc
Confidence 3345667899999999999999999999999999999999998776 58999999998643 23455688889999
Q ss_pred CCCCCCCHHHHHHHHHHhcc--------CCC-CChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHH
Q 000517 944 IHSPNITVEESVIFSAWLRL--------APE-INSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVE 1014 (1449)
Q Consensus 944 ~~~~~lTv~e~l~f~~~lr~--------~~~-~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~a 1014 (1449)
.+|+++||.||+..++..+. +.. ...++..+++.++|+.+||.+.+|...| +||+||||||.||||
T Consensus 89 rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArA 163 (250)
T COG0411 89 RLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARA 163 (250)
T ss_pred cccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHH
Confidence 99999999999998765331 111 1234566788999999999999999976 699999999999999
Q ss_pred HhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1015 LVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1015 L~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
|+.+|++|+||||.+||.+.....+.+.|+++.+ .|.||+++-|+.+. ++..+|++++|. .|+++..|++.+
T Consensus 164 La~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~-~G~~IAeG~P~e 236 (250)
T COG0411 164 LATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLN-YGEVIAEGTPEE 236 (250)
T ss_pred HhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEecc-CCcCcccCCHHH
Confidence 9999999999999999999999999999999987 47999999999984 899999999998 589999999853
No 128
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-36 Score=323.12 Aligned_cols=206 Identities=27% Similarity=0.415 Sum_probs=175.2
Q ss_pred ccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc----ccccceEEEEccCCCC
Q 000517 870 ADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ----ETFARVSGYCEQTDIH 945 (1449)
Q Consensus 870 ~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d~~ 945 (1449)
.|++.++|++||+++++||+++|+|+|||||||||++|+|..++ .+|+|.++|.++.. +..++.++||||....
T Consensus 12 ~YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~i 89 (237)
T COG0410 12 GYGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDITGLPPHERARLGIAYVPEGRRI 89 (237)
T ss_pred cccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecCCCCHHHHHhCCeEeCcccccc
Confidence 45678899999999999999999999999999999999998764 48999999998653 3456789999999999
Q ss_pred CCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 946 SPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIE-LDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 946 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
||.+||+|||..++..+.. ++.....++++.+.+= |.+.+++..| .|||||||-|+|||||+++|++|+|
T Consensus 90 F~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSGGEQQMLAiaRALm~~PklLLL 160 (237)
T COG0410 90 FPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSGGEQQMLAIARALMSRPKLLLL 160 (237)
T ss_pred hhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCChHHHHHHHHHHHHhcCCCEEEe
Confidence 9999999999987655432 1112222677777763 6667777765 6999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
||||.||-|.-.+.|.+.|++++++ |.||+++-+... ...+.+|+.++|. .|++++.|+..+
T Consensus 161 DEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle-~Griv~~G~~~e 223 (237)
T COG0410 161 DEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLE-NGRIVLSGTAAE 223 (237)
T ss_pred cCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEe-CCEEEEecCHHH
Confidence 9999999999999999999999866 779999988765 4678899999997 599999999753
No 129
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.8e-36 Score=356.15 Aligned_cols=209 Identities=23% Similarity=0.405 Sum_probs=177.6
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCCHH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMTVR 263 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 263 (1449)
++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|+++|+++....+ ++.++||+|++.++|++||+
T Consensus 16 ~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~ 92 (353)
T PRK10851 16 QVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVF 92 (353)
T ss_pred EEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHH
Confidence 5899999999999999999999999999999999999998 9999999998865433 36799999999999999999
Q ss_pred HHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccC
Q 000517 264 ETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGI 343 (1449)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGl 343 (1449)
||+.|+.+....... .++.+ .+..++.+++.+||++..|+.+.+ |
T Consensus 93 eni~~~~~~~~~~~~------~~~~~------------------------~~~~~~~~l~~~~L~~~~~~~~~~-----L 137 (353)
T PRK10851 93 DNIAFGLTVLPRRER------PNAAA------------------------IKAKVTQLLEMVQLAHLADRYPAQ-----L 137 (353)
T ss_pred HHHHhhhhhcccccC------CCHHH------------------------HHHHHHHHHHHcCCchhhhCChhh-----C
Confidence 999997653210000 00000 112356789999999888888765 9
Q ss_pred ChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEE
Q 000517 344 SGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIV 423 (1449)
Q Consensus 344 SGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv 423 (1449)
||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..+.|+|+ ++|+..++..++|+|++|++|+++
T Consensus 138 SgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~-vTHd~~ea~~~~Dri~vl~~G~i~ 216 (353)
T PRK10851 138 SGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVF-VTHDQEEAMEVADRVVVMSQGNIE 216 (353)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEE-EeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999997755666655 456778999999999999999999
Q ss_pred EecChhhHH
Q 000517 424 YHGPQDHVL 432 (1449)
Q Consensus 424 ~~G~~~~~~ 432 (1449)
+.|+++++.
T Consensus 217 ~~g~~~~i~ 225 (353)
T PRK10851 217 QAGTPDQVW 225 (353)
T ss_pred EEcCHHHHH
Confidence 999998884
No 130
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-37 Score=373.33 Aligned_cols=214 Identities=25% Similarity=0.445 Sum_probs=181.8
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++|+||+|.++..+ +..+|+|+||+|+|||.+||+||||+||||+.++|-....| .+|+|.+||+|+
T Consensus 465 ~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~P--tsG~IllDG~~i 532 (716)
T KOG0058|consen 465 VIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDP--TSGRILLDGVPI 532 (716)
T ss_pred eEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCC--CCCeEEECCeeh
Confidence 689999999998654 46799999999999999999999999999999999986654 689999999996
Q ss_pred cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHH-----HHHHHHHHHcCCcccccccccCCCCC
Q 000517 928 VQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKA-----EFVNEVLETIELDAIKDSLVGIPGVN 999 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~-----~~v~~~l~~l~L~~~~~~~vg~~~~~ 999 (1449)
.+ ..+|+++|+|.|+|.+|. -||+|||.|+.. ..+.++.. ..+.+.+ .++.+-.||.||..|.
T Consensus 533 ~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI--~~~p~gY~T~VGEkG~- 603 (716)
T KOG0058|consen 533 SDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFI--TNFPDGYNTVVGEKGS- 603 (716)
T ss_pred hhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHH--HhCccccccccCCccc-
Confidence 54 567899999999999975 699999999743 22232221 1222233 3566779999998876
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000517 1000 GLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGR 1079 (1449)
Q Consensus 1000 ~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~ 1079 (1449)
.||||||||++|||||++||.||||||.||.||+++...|.++|.++.+ ++|||++.|+.+ ..+.+|+|++++ +|+
T Consensus 604 qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~-~G~ 679 (716)
T KOG0058|consen 604 QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVID-KGR 679 (716)
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEc-CCe
Confidence 5999999999999999999999999999999999999999999998764 699999999875 578999999997 589
Q ss_pred EEEecCC
Q 000517 1080 IIYCGPL 1086 (1449)
Q Consensus 1080 ~v~~G~~ 1086 (1449)
+++.|+-
T Consensus 680 V~E~G~h 686 (716)
T KOG0058|consen 680 VVEMGTH 686 (716)
T ss_pred EEecccH
Confidence 9999964
No 131
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-36 Score=342.17 Aligned_cols=205 Identities=31% Similarity=0.390 Sum_probs=171.9
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTDIHSP 947 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d~~~~ 947 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEP--TSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 4699999999999999999999999999999999998654 58999999987532 234567999999999899
Q ss_pred CCCHHHHHHHHHHhc-----cCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000517 948 NITVEESVIFSAWLR-----LAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSII 1022 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr-----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~il 1022 (1449)
.+||+||+.+..... ...........+.++++++.++|.+..++.+ ..||||||||++||++|+.+|+||
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQRA-----DQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCCc-----ccCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999998753210 0001112234466888999999987777664 379999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1023 FMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1023 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|. +|++++.|+..
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~-~G~i~~~~~~~ 230 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLK-DGRIVFDGPPA 230 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEeecCHH
Confidence 999999999999999999999999764 899999999986 5777899999998 58999998763
No 132
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.8e-36 Score=337.41 Aligned_cols=200 Identities=27% Similarity=0.439 Sum_probs=172.7
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEccCCCCCCCCCH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHSPNITV 951 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 951 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.+||++|++.+++..|+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 92 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRP--TSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTV 92 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccchHHHhhhEEEecCcCCccccCCH
Confidence 4699999999999999999999999999999999998654 58999999987532 2345679999999998889999
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000517 952 EESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGL 1031 (1449)
Q Consensus 952 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgL 1031 (1449)
+||+.+....+. .......+.++++++.++|.+..++.++ .||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~llllDEP~~~L 164 (220)
T cd03263 93 REHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRAR-----TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGL 164 (220)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChhh-----hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 999988654432 2233345668899999999887777654 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1032 DARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1032 D~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|. +|++++.|+.
T Consensus 165 D~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 216 (220)
T cd03263 165 DPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMS-DGKLRCIGSP 216 (220)
T ss_pred CHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEE-CCEEEecCCH
Confidence 99999999999999875 699999999986 4667899999997 5899998875
No 133
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-36 Score=339.33 Aligned_cols=200 Identities=27% Similarity=0.342 Sum_probs=173.1
Q ss_pred eeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccc------cccceEEEEccCCCCCCC
Q 000517 875 RLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQE------TFARVSGYCEQTDIHSPN 948 (1449)
Q Consensus 875 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~------~~~~~~gyv~Q~d~~~~~ 948 (1449)
.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.... ..++.++|++|++.+++.
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERP--TSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSS 96 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCC
Confidence 699999999999999999999999999999999998765 589999999875321 235679999999999999
Q ss_pred CCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000517 949 ITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1028 (1449)
Q Consensus 949 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPT 1028 (1449)
+|++||+.+....+. .......+.++++++.++|.+..+..+ ..||||||||++||++|+.+|++|+|||||
T Consensus 97 ~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDEP~ 168 (233)
T cd03258 97 RTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAYP-----AQLSGGQKQRVGIARALANNPKVLLCDEAT 168 (233)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCC
Confidence 999999988654332 223344567889999999988777764 379999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1029 TGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1029 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|. +|++++.|+.
T Consensus 169 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 225 (233)
T cd03258 169 SALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVME-KGEVVEEGTV 225 (233)
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEecCH
Confidence 999999999999999999765 899999999986 5677899999997 5899998875
No 134
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=2.5e-36 Score=337.29 Aligned_cols=193 Identities=31% Similarity=0.467 Sum_probs=165.3
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccc-------cccceEEEEccCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQE-------TFARVSGYCEQTDIHS 946 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~-------~~~~~~gyv~Q~d~~~ 946 (1449)
+.+|+|+||++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.... ..++.++|++|++.++
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRP--TSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLL 94 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCC--CceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccC
Confidence 4699999999999999999999999999999999998654 589999999875321 1345799999999999
Q ss_pred CCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000517 947 PNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1026 (1449)
Q Consensus 947 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDE 1026 (1449)
+.+||+||+.+....+. ......++.++++++.+||.+..++.++ .||||||||++||++|+.+|++|+|||
T Consensus 95 ~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~lllLDE 166 (218)
T cd03255 95 PDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYPS-----ELSGGQQQRVAIARALANDPKIILADE 166 (218)
T ss_pred CCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcChh-----hcCHHHHHHHHHHHHHccCCCEEEEcC
Confidence 99999999998765432 2223345678899999999887777653 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000517 1027 PTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGR 1079 (1449)
Q Consensus 1027 PTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~ 1079 (1449)
||+|||+.++..+.+.|+++++ .|+|||+++|+++. + +.+|++++|++ |+
T Consensus 167 P~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~v~~l~~-G~ 217 (218)
T cd03255 167 PTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPEL-A-EYADRIIELRD-GK 217 (218)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHH-H-hhhcEEEEeeC-Cc
Confidence 9999999999999999999976 58999999999863 4 48999999974 65
No 135
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-36 Score=323.83 Aligned_cols=205 Identities=26% Similarity=0.345 Sum_probs=174.9
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC----CCceEEEEcCCC--ccC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV----PPKTSAYISQND--LHI 257 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d--~~~ 257 (1449)
.++|+|||+++.+||..+|+|+||||||||.++|+|..+|+ +|+|.++|.+..... ..+.+-+|+||+ .+-
T Consensus 20 ~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLn 96 (252)
T COG1124 20 FHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLN 96 (252)
T ss_pred hhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccC
Confidence 36999999999999999999999999999999999999998 999999998776542 356789999996 478
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc-ccccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV-CADTMVG 336 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~-~~dt~vg 336 (1449)
|..||++.|.-+.+..+.... ..++.++|+.+||+. ..+...-
T Consensus 97 P~~tv~~~l~Epl~~~~~~~~------------------------------------~~~i~~~L~~VgL~~~~l~R~P~ 140 (252)
T COG1124 97 PRRTVGRILSEPLRPHGLSKS------------------------------------QQRIAELLDQVGLPPSFLDRRPH 140 (252)
T ss_pred cchhHHHHHhhhhccCCccHH------------------------------------HHHHHHHHHHcCCCHHHHhcCch
Confidence 999999999876654322111 012466899999975 4566554
Q ss_pred ccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEE
Q 000517 337 NAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIIL 416 (1449)
Q Consensus 337 ~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~l 416 (1449)
+ |||||||||+|||||+.+|++|++|||||+||++...+|++.|.++.+..+-|.+ .+.|+..-+..+||||++
T Consensus 141 e-----LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l-~IsHdl~~v~~~cdRi~V 214 (252)
T COG1124 141 E-----LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYL-FISHDLALVEHMCDRIAV 214 (252)
T ss_pred h-----cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEE-EEeCcHHHHHHHhhheee
Confidence 3 9999999999999999999999999999999999999999999999886655555 467889999999999999
Q ss_pred EeCCeEEEecChhhHHH
Q 000517 417 MAEGKIVYHGPQDHVLA 433 (1449)
Q Consensus 417 L~~G~iv~~G~~~~~~~ 433 (1449)
|++|++++.++.+++.+
T Consensus 215 m~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 215 MDNGQIVEIGPTEELLS 231 (252)
T ss_pred eeCCeEEEeechhhhhc
Confidence 99999999999999864
No 136
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-36 Score=357.37 Aligned_cols=205 Identities=23% Similarity=0.397 Sum_probs=177.9
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCCHH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMTVR 263 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 263 (1449)
.+|+|+|+.+++|++++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|++.++|++||.
T Consensus 33 ~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~ 109 (377)
T PRK11607 33 HAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVE 109 (377)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHH
Confidence 5899999999999999999999999999999999999998 9999999998765433 56799999999999999999
Q ss_pred HHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccC
Q 000517 264 ETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGI 343 (1449)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGl 343 (1449)
||+.|+.+.++.. +.+ ....++.+++.+||.+..++.+.+ |
T Consensus 110 eNi~~~l~~~~~~----------~~~------------------------~~~~v~~~l~~l~L~~~~~~~~~~-----L 150 (377)
T PRK11607 110 QNIAFGLKQDKLP----------KAE------------------------IASRVNEMLGLVHMQEFAKRKPHQ-----L 150 (377)
T ss_pred HHHHHHHHHcCCC----------HHH------------------------HHHHHHHHHHHcCCchhhcCChhh-----C
Confidence 9999986543211 000 012356789999999888887765 9
Q ss_pred ChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEE
Q 000517 344 SGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIV 423 (1449)
Q Consensus 344 SGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv 423 (1449)
||||||||+|||||+.+|++||||||+++||..++.++.+.|+++.+..+.|+|++ +|...++..++|+|++|++|+++
T Consensus 151 SgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~v-THd~~ea~~laDri~vl~~G~i~ 229 (377)
T PRK11607 151 SGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMV-THDQEEAMTMAGRIAIMNRGKFV 229 (377)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEE-cCCHHHHHHhCCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999999877666676665 56677999999999999999999
Q ss_pred EecChhhHH
Q 000517 424 YHGPQDHVL 432 (1449)
Q Consensus 424 ~~G~~~~~~ 432 (1449)
..|+++++.
T Consensus 230 ~~g~~~~~~ 238 (377)
T PRK11607 230 QIGEPEEIY 238 (377)
T ss_pred EEcCHHHHH
Confidence 999999874
No 137
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=7.5e-35 Score=367.10 Aligned_cols=213 Identities=29% Similarity=0.465 Sum_probs=178.0
Q ss_pred CcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCc
Q 000517 846 PLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGY 925 (1449)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~ 925 (1449)
.-.++|+|++|++... +..+|+|+|++|+|||.+||+|+||||||||+|+|+|...| .+|+|.+||+
T Consensus 469 ~g~I~~~nvsf~y~~~-----------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p--~~G~I~~dg~ 535 (709)
T COG2274 469 QGEIEFENVSFRYGPD-----------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKP--QQGRILLDGV 535 (709)
T ss_pred CceEEEEEEEEEeCCC-----------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCE
Confidence 3468999999987532 23699999999999999999999999999999999998776 5899999999
Q ss_pred cCc---cccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHc-------CCcccccccccC
Q 000517 926 PKV---QETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETI-------ELDAIKDSLVGI 995 (1449)
Q Consensus 926 ~~~---~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-------~L~~~~~~~vg~ 995 (1449)
+.. ...+|+.+|||+|++.++ +-|++||+.++. ++.+. +.+.++++.- ++..-.|+.+|.
T Consensus 536 dl~~i~~~~lR~~ig~V~Q~~~Lf-~gSI~eNi~l~~-----p~~~~----e~i~~A~~~ag~~~fI~~lP~gy~t~v~E 605 (709)
T COG2274 536 DLNDIDLASLRRQVGYVLQDPFLF-SGSIRENIALGN-----PEATD----EEIIEAAQLAGAHEFIENLPMGYDTPVGE 605 (709)
T ss_pred eHHhcCHHHHHhheeEEcccchhh-cCcHHHHHhcCC-----CCCCH----HHHHHHHHHhCcHHHHHhccccccccccc
Confidence 864 357899999999999876 469999998642 22222 2233333332 344457888887
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
.|. +||||||||++|||||+++|+||+||||||+||+.+.+.|++.|+++. .|+|+|+++|+++ ..+.+|++++|+
T Consensus 606 ~G~-~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIiVl~ 681 (709)
T COG2274 606 GGA-NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRIIVLD 681 (709)
T ss_pred CCC-CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEEEcc
Confidence 665 699999999999999999999999999999999999999999999985 5899999999975 678999999997
Q ss_pred cCcEEEEecCC
Q 000517 1076 TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~gG~~v~~G~~ 1086 (1449)
+|+++..|+.
T Consensus 682 -~Gkiv~~gs~ 691 (709)
T COG2274 682 -QGKIVEQGSH 691 (709)
T ss_pred -CCceeccCCH
Confidence 6999999986
No 138
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=326.15 Aligned_cols=221 Identities=24% Similarity=0.380 Sum_probs=184.9
Q ss_pred cccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCC----ceEEEEcCCCccC
Q 000517 182 AKINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPP----KTSAYISQNDLHI 257 (1449)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 257 (1449)
....+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...+. .-++--+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 4567999999999999999999999999999999999999998 99999999999877653 3567889999999
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGN 337 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 337 (1449)
++|||.||+..++..+.. ........+..+ +.++ .......+|+.+||.+.+|+..|+
T Consensus 92 ~~lTVlENv~va~~~~~~---~~~~l~~~~~~~--------~e~~-----------~~e~A~~~Le~vgL~~~a~~~A~~ 149 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LSGLLGRPRARK--------EERE-----------ARERARELLEFVGLGELADRPAGN 149 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hhhhhccccchh--------hHHH-----------HHHHHHHHHHHcCCchhhcchhhc
Confidence 999999999998764421 000000000000 0000 112357789999999999999998
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.|+++.+.. ++.|+.+-|+..-++++||||++|
T Consensus 150 -----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~-g~tillIEHdM~~Vm~l~dri~Vl 223 (250)
T COG0411 150 -----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRG-GVTILLIEHDMKLVMGLADRIVVL 223 (250)
T ss_pred -----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcC-CcEEEEEEeccHHHhhhccEEEec
Confidence 99999999999999999999999999999999999999999999998744 455556788999999999999999
Q ss_pred eCCeEEEecChhhHHH
Q 000517 418 AEGKIVYHGPQDHVLA 433 (1449)
Q Consensus 418 ~~G~iv~~G~~~~~~~ 433 (1449)
+.|+++.+|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999864
No 139
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=5.4e-36 Score=353.04 Aligned_cols=206 Identities=27% Similarity=0.374 Sum_probs=177.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC--CCceEEEEcCCCccCCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV--PPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1449)
+.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 35999999999999999999999999999999999999998 999999999875432 2467999999999999999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+||+.+.....+... .+ ....++.+++.+||++..++.+++
T Consensus 131 v~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~ll~~~~L~~~~~~~~~~---- 172 (340)
T PRK13536 131 VRENLLVFGRYFGMST----------RE------------------------IEAVIPSLLEFARLESKADARVSD---- 172 (340)
T ss_pred HHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCchhhCCChhh----
Confidence 9999997655432110 00 011245678899999989998876
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
|||||||||+||+||+++|++++|||||+|||+.++.++++.|+++.+ .+.|++++ +|..+++.++||+|++|++|+
T Consensus 173 -LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~g~tilis-SH~l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 173 -LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLT-THFMEEAERLCDRLCVLEAGR 249 (340)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEE-CCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999975 46777766 456789999999999999999
Q ss_pred EEEecChhhHHH
Q 000517 422 IVYHGPQDHVLA 433 (1449)
Q Consensus 422 iv~~G~~~~~~~ 433 (1449)
++++|+.+++.+
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999998864
No 140
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-36 Score=334.65 Aligned_cols=207 Identities=28% Similarity=0.410 Sum_probs=181.1
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCC----CCCCCceEEEEcCCC-ccCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLE----EFVPPKTSAYISQND-LHIA 258 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 258 (1449)
..+|+|+|+.+++|+.++|+||||||||||+++|+|.+.|. +|+|.++|.+.. ....++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 46999999999999999999999999999999999999998 899999998865 223468899999995 5778
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
.-||.|.+.|+....+.... + .+.+++.+++.+||.+..+..+-+
T Consensus 94 ~~tV~~evafg~~n~g~~~~----------e------------------------~~~rv~~~l~~vgl~~~~~r~p~~- 138 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPRE----------E------------------------IEERVAEALELVGLEELLDRPPFN- 138 (235)
T ss_pred cCcHHHHHhhchhhcCCCHH----------H------------------------HHHHHHHHHHHcCchhhccCCccc-
Confidence 88999999999877654311 1 123567889999999999888766
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
|||||||||+||.+|+.+|++|+|||||||||+..+.++++.++++.+..++|+|+. +|+.+.+.+++|++++|+
T Consensus 139 ----LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~-tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 139 ----LSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIV-THDLELVLEYADRVVVLD 213 (235)
T ss_pred ----cCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEE-eCcHHHHHhhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999987656676664 677899999999999999
Q ss_pred CCeEEEecChhhHHH
Q 000517 419 EGKIVYHGPQDHVLA 433 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1449)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999877754
No 141
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.3e-36 Score=380.82 Aligned_cols=207 Identities=29% Similarity=0.487 Sum_probs=178.5
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1449)
.+|+|+|++|+|||.++|+|+||||||||+|+|+|+++|. +|+|.+||+++++.+. |+.++||+|++.+| +.|
T Consensus 487 ~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf-~gS 562 (709)
T COG2274 487 PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLF-SGS 562 (709)
T ss_pred chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhh-cCc
Confidence 5899999999999999999999999999999999999998 9999999999987764 68999999987755 579
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
++||+.++. |+.+.++.++++...+... . +..++...||.||+ +..
T Consensus 563 I~eNi~l~~-------------------------p~~~~e~i~~A~~~ag~~~-----f---I~~lP~gy~t~v~E-~G~ 608 (709)
T COG2274 563 IRENIALGN-------------------------PEATDEEIIEAAQLAGAHE-----F---IENLPMGYDTPVGE-GGA 608 (709)
T ss_pred HHHHHhcCC-------------------------CCCCHHHHHHHHHHhCcHH-----H---HHhccccccccccc-CCC
Confidence 999998753 3334445555555554432 2 23489999999997 355
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
+||||||||++|||||+++|+||+||||||+||+.+...|.+.|.++. .++|+|+..|.+ .+.+.||+|++|++|+
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~~T~I~IaHRl--~ti~~adrIiVl~~Gk 684 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QGRTVIIIAHRL--STIRSADRIIVLDQGK 684 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cCCeEEEEEccc--hHhhhccEEEEccCCc
Confidence 699999999999999999999999999999999999999999999986 368888877654 5889999999999999
Q ss_pred EEEecChhhHHH
Q 000517 422 IVYHGPQDHVLA 433 (1449)
Q Consensus 422 iv~~G~~~~~~~ 433 (1449)
|+.+|+++++++
T Consensus 685 iv~~gs~~ell~ 696 (709)
T COG2274 685 IVEQGSHEELLA 696 (709)
T ss_pred eeccCCHHHHHH
Confidence 999999999986
No 142
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.9e-36 Score=351.33 Aligned_cols=206 Identities=26% Similarity=0.417 Sum_probs=176.8
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC--CCceEEEEcCCCccCCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV--PPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1449)
+++|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999998 999999998875421 1456999999999999999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+||+.+.++..+... .+ .+..++.+++.+||++..++.+++
T Consensus 83 v~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~---- 124 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------DE------------------------AEERAEELLELFELGEAADRPVGT---- 124 (302)
T ss_pred HHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCChhHhCCchhh----
Confidence 9999998765543210 00 011346789999999888888876
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
|||||||||+||+||+.+|++|+|||||+|||+.++..+++.|+++++ .+.|++++ +|..+++.++||+|++|++|+
T Consensus 125 -LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~tvi~~-sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 125 -YSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-EGVTILLT-THYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEE-CCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999875 46676665 455778999999999999999
Q ss_pred EEEecChhhHHH
Q 000517 422 IVYHGPQDHVLA 433 (1449)
Q Consensus 422 iv~~G~~~~~~~ 433 (1449)
+++.|+.+++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999988765
No 143
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-36 Score=356.50 Aligned_cols=205 Identities=22% Similarity=0.395 Sum_probs=176.6
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCCHH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMTVR 263 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 263 (1449)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|+..+++.+||+
T Consensus 17 ~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~ 93 (369)
T PRK11000 17 VISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVA 93 (369)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHH
Confidence 5899999999999999999999999999999999999998 9999999998765432 46799999999999999999
Q ss_pred HHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccC
Q 000517 264 ETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGI 343 (1449)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGl 343 (1449)
||+.|+.+..+.. +.+ ....++++++.+||++..++.+++ |
T Consensus 94 eni~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~lgL~~~~~~~~~~-----L 134 (369)
T PRK11000 94 ENMSFGLKLAGAK----------KEE------------------------INQRVNQVAEVLQLAHLLDRKPKA-----L 134 (369)
T ss_pred HHHHhHHhhcCCC----------HHH------------------------HHHHHHHHHHHcCChhhhcCChhh-----C
Confidence 9999976543211 000 012356789999999888888765 9
Q ss_pred ChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEE
Q 000517 344 SGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIV 423 (1449)
Q Consensus 344 SGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv 423 (1449)
||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+..+.|+|++ +|...++..++|+|++|++|+++
T Consensus 135 SgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~v-THd~~~~~~~~d~i~vl~~G~i~ 213 (369)
T PRK11000 135 SGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYV-THDQVEAMTLADKIVVLDAGRVA 213 (369)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEE-eCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999876556676665 45667899999999999999999
Q ss_pred EecChhhHH
Q 000517 424 YHGPQDHVL 432 (1449)
Q Consensus 424 ~~G~~~~~~ 432 (1449)
..|+++++.
T Consensus 214 ~~g~~~~i~ 222 (369)
T PRK11000 214 QVGKPLELY 222 (369)
T ss_pred EEcCHHHHH
Confidence 999998874
No 144
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-36 Score=311.81 Aligned_cols=217 Identities=26% Similarity=0.418 Sum_probs=182.8
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
++.+|++|++. .+++|++||++++|||++||+|||||||||||+.|+|...+ .+|++.+||.+..
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 45677888763 46799999999999999999999999999999999998765 4899999999864
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000517 929 Q---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQ 1005 (1449)
Q Consensus 929 ~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1005 (1449)
. ..+.+..+..+|+..+.+..||+|-+.++..-... .-...+..+.++++|+..++.+...+.. ..|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRDY-----RTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccch-----hhcCchH
Confidence 3 34566779999999888889999999987532211 1112244556889999999998887764 4799999
Q ss_pred HHHHHHHHHHhh------CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000517 1006 RKRLTIAVELVA------NPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGR 1079 (1449)
Q Consensus 1006 rqRl~Ia~aL~~------~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~ 1079 (1449)
||||.+||.|+. ++++||||||||.||...+..++++.|+++++|..|+++.||.+. ...++|++++|. +||
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~-~Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLH-QGR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeee-CCe
Confidence 999999999976 456999999999999999999999999999999999999999985 567899999997 699
Q ss_pred EEEecCCCC
Q 000517 1080 IIYCGPLGK 1088 (1449)
Q Consensus 1080 ~v~~G~~~~ 1088 (1449)
++..|++.+
T Consensus 219 v~a~g~p~~ 227 (259)
T COG4559 219 VIASGSPQD 227 (259)
T ss_pred EeecCCHHH
Confidence 999999864
No 145
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.2e-37 Score=315.40 Aligned_cols=209 Identities=22% Similarity=0.378 Sum_probs=180.9
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCC
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIA 258 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 258 (1449)
++++++|||+.+++||+++++|||||||||.+.++.|+.+|+ +|+|.+||.+++.+.. +.-+||+||++..|-
T Consensus 16 kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 16 KRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 456999999999999999999999999999999999999998 9999999999987653 345899999999999
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
.|||+|||.-..+.+....+ + .+.+...+.+|+.|+|.+++|.+-..
T Consensus 93 ~LtV~dNi~~vlE~~~~d~~--------~------------------------~~~~~~l~~LL~ef~i~hlr~~~a~s- 139 (243)
T COG1137 93 KLTVEDNIMAVLEIREKDLK--------K------------------------AERKEELDALLEEFHITHLRDSKAYS- 139 (243)
T ss_pred cCcHHHHHHHHHhhhhcchh--------H------------------------HHHHHHHHHHHHHhchHHHhcCcccc-
Confidence 99999999877655421100 0 01123457899999999999988765
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
||||||+|+.|||||+.+|+.++||||++|+||.+..+|.+.++.+.. .|-.++|+ -|...|+...|||.++++
T Consensus 140 ----LSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~-rgiGvLIT-DHNVREtL~i~dRaYIi~ 213 (243)
T COG1137 140 ----LSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD-RGIGVLIT-DHNVRETLDICDRAYIIS 213 (243)
T ss_pred ----cccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh-CCceEEEc-cccHHHHHhhhheEEEEe
Confidence 999999999999999999999999999999999999999999999976 45566655 567889999999999999
Q ss_pred CCeEEEecChhhHHH
Q 000517 419 EGKIVYHGPQDHVLA 433 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1449)
+|++..+|+++++.+
T Consensus 214 ~G~vla~G~p~ei~~ 228 (243)
T COG1137 214 DGKVLAEGSPEEIVN 228 (243)
T ss_pred cCeEEecCCHHHHhc
Confidence 999999999998864
No 146
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6.4e-36 Score=338.89 Aligned_cols=202 Identities=23% Similarity=0.358 Sum_probs=173.3
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-----ccccceEEEEccCCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-----ETFARVSGYCEQTDIHSPN 948 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-----~~~~~~~gyv~Q~d~~~~~ 948 (1449)
+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEI--TSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPH 91 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCcCChhHHHHhhceEEEecccccCCC
Confidence 4699999999999999999999999999999999998654 58999999987532 2345679999999988889
Q ss_pred CCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000517 949 ITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1028 (1449)
Q Consensus 949 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPT 1028 (1449)
+||+||+.+...... ........+.+.++++.+||.+..+..+ +.||||||||++||++|+.+|++|+|||||
T Consensus 92 ~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~ 164 (240)
T PRK09493 92 LTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHYP-----SELSGGQQQRVAIARALAVKPKLMLFDEPT 164 (240)
T ss_pred CcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999987542111 1233445567889999999987777764 379999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1029 TGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1029 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 165 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 220 (240)
T PRK09493 165 SALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFID-KGRIAEDGDP 220 (240)
T ss_pred ccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEeeCCH
Confidence 999999999999999999877999999999986 4667899999997 5899999875
No 147
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-36 Score=336.20 Aligned_cols=216 Identities=24% Similarity=0.372 Sum_probs=177.8
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|+++.+... .....+|+|+||+|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 6 l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~i~ 74 (233)
T PRK11629 6 LQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTP--TSGDVIFNGQPMS 74 (233)
T ss_pred EEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcC
Confidence 6677777655310 0014699999999999999999999999999999999998654 5899999998753
Q ss_pred cc------cc-cceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000517 929 QE------TF-ARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGL 1001 (1449)
Q Consensus 929 ~~------~~-~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 1001 (1449)
.. .+ ++.++|++|++.+++.+|++||+.+....+ ....+..++.++++++.+||.+..++.+ ..|
T Consensus 75 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 146 (233)
T PRK11629 75 KLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHRP-----SEL 146 (233)
T ss_pred cCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhC
Confidence 21 12 256999999998889999999998865432 1223344567889999999988777664 379
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEE
Q 000517 1002 STEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRI 1080 (1449)
Q Consensus 1002 SgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~ 1080 (1449)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||++||+++. + ..+|++++|. +|++
T Consensus 147 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~-~-~~~~~~~~l~-~G~i 223 (233)
T PRK11629 147 SGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQL-A-KRMSRQLEMR-DGRL 223 (233)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-H-HhhCEEEEEE-CCEE
Confidence 99999999999999999999999999999999999999999999875 58999999999753 4 4568999987 5899
Q ss_pred EEecCC
Q 000517 1081 IYCGPL 1086 (1449)
Q Consensus 1081 v~~G~~ 1086 (1449)
+..|+.
T Consensus 224 ~~~~~~ 229 (233)
T PRK11629 224 TAELSL 229 (233)
T ss_pred EEEecc
Confidence 998875
No 148
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6.9e-36 Score=340.80 Aligned_cols=214 Identities=25% Similarity=0.363 Sum_probs=179.0
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|+++.+ +++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 4 l~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKF-------------HGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQP--EAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEE-------------CCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEcc
Confidence 5566766544 234699999999999999999999999999999999998654 5899999998653
Q ss_pred c-----------ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCC
Q 000517 929 Q-----------ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPG 997 (1449)
Q Consensus 929 ~-----------~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 997 (1449)
. ...++.++|++|++.+++..|+.||+.+...... ....+...+.++++++.+||.+..++.+
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 142 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSYP---- 142 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCCh----
Confidence 1 1345679999999988889999999987543211 1223344567889999999987776654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||+++|+++ ++.+.+|++++|+ +
T Consensus 143 -~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~-~ 219 (250)
T PRK11264 143 -RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMD-Q 219 (250)
T ss_pred -hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEE-C
Confidence 479999999999999999999999999999999999999999999999877999999999986 5677899999998 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 899999875
No 149
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3.4e-36 Score=341.88 Aligned_cols=205 Identities=27% Similarity=0.340 Sum_probs=171.2
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTDIHSP 947 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d~~~~ 947 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.+||++|++.+++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 92 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEP--SSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIE 92 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccc
Confidence 4699999999999999999999999999999999998654 58999999987532 124567999999998899
Q ss_pred CCCHHHHHHHHHHhc-----cCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000517 948 NITVEESVIFSAWLR-----LAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSII 1022 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr-----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~il 1022 (1449)
.+||+||+.+..... ..........++.+.++++.++|.+..+..+ ..||||||||++||++|+.+|++|
T Consensus 93 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~ll 167 (243)
T TIGR02315 93 RLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQRA-----DQLSGGQQQRVAIARALAQQPDLI 167 (243)
T ss_pred cccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999997642110 0001112334567889999999987777664 379999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1023 FMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1023 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
+|||||+|||+.++..+.+.|++++++ |+|||++||+++ .+.+.+|++++|. +|++++.|+.+
T Consensus 168 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~-~G~i~~~~~~~ 231 (243)
T TIGR02315 168 LADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLK-AGEIVFDGAPS 231 (243)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEE-CCEEEecCCHH
Confidence 999999999999999999999998754 899999999986 4667899999997 58999988764
No 150
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-36 Score=338.71 Aligned_cols=201 Identities=28% Similarity=0.406 Sum_probs=172.7
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCCCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSPNIT 950 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~lT 950 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEP--TSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 4599999999999999999999999999999999998654 58999999987532 234567999999999999999
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc--cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000517 951 VEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA--IKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1028 (1449)
Q Consensus 951 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPT 1028 (1449)
|+||+.+...++. .......+.+.++++.++|.+ ..++.+ +.||||||||++|||+|+.+|++|+|||||
T Consensus 92 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt 163 (242)
T cd03295 92 VEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRYP-----HELSGGQQQRVGVARALAADPPLLLMDEPF 163 (242)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 9999988654331 223444567889999999985 556554 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1029 TGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1029 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 164 ~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 220 (242)
T cd03295 164 GALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMK-NGEIVQVGTP 220 (242)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEecCH
Confidence 999999999999999999764 899999999986 5678899999998 5899998875
No 151
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-36 Score=339.65 Aligned_cols=200 Identities=29% Similarity=0.406 Sum_probs=171.6
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCHHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEE 953 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~e 953 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+.+||++|++.+++..||.|
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~e 89 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPY--QHGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQD 89 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHHH
Confidence 4699999999999999999999999999999999998654 58999999987542 2345899999998888999999
Q ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000517 954 SVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDA 1033 (1449)
Q Consensus 954 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~ 1033 (1449)
|+.+....+. .......+.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 90 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~ 161 (255)
T PRK11248 90 NVAFGLQLAG---VEKMQRLEIAHQMLKKVGLEGAEKRYI-----WQLSGGQRQRVGIARALAANPQLLLLDEPFGALDA 161 (255)
T ss_pred HHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCH
Confidence 9987644321 223344567889999999988777664 37999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEec-CcEEEEecCC
Q 000517 1034 RAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKT-GGRIIYCGPL 1086 (1449)
Q Consensus 1034 ~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~-gG~~v~~G~~ 1086 (1449)
.++..+.+.|+++++ .|+|||++||+++ ++...+|++++|.+ +|+++..++.
T Consensus 162 ~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 162 FTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999854 5899999999986 57788999999974 5899998765
No 152
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.4e-36 Score=306.73 Aligned_cols=200 Identities=25% Similarity=0.402 Sum_probs=173.9
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC------CceEEEEcCCCccC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP------PKTSAYISQNDLHI 257 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 257 (1449)
..+|+|||+.|++||++.|.||||||||||||+|.+...|+ .|+|.+||+++..... +|.+|+|+||..++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 46999999999999999999999999999999999999998 9999999999875432 68899999999999
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGN 337 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 337 (1449)
+..||.||+.|+.+..|...+. .+.++..+|+..||.+.++...-.
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~~~----------------------------------i~~rV~~~L~~VgL~~k~~~lP~~ 137 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPPRE----------------------------------IRRRVSEVLDLVGLKHKARALPSQ 137 (223)
T ss_pred ccchHhhhhhhhhhccCCCHHH----------------------------------HHHHHHHHHHHhccchhhhcCccc
Confidence 9999999999998877643210 122466789999999988877655
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
|||||||||+||||++.+|++|+.||||-.||+..+.+|++.+.++.+ .|.|++++ +|+..-+..+--+++.|
T Consensus 138 -----LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr-~GtTVl~A-THd~~lv~~~~~rvl~l 210 (223)
T COG2884 138 -----LSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR-LGTTVLMA-THDLELVNRMRHRVLAL 210 (223)
T ss_pred -----cCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh-cCcEEEEE-eccHHHHHhccCcEEEE
Confidence 999999999999999999999999999999999999999999999875 56666665 56666677777899999
Q ss_pred eCCeEEEecC
Q 000517 418 AEGKIVYHGP 427 (1449)
Q Consensus 418 ~~G~iv~~G~ 427 (1449)
++|+++....
T Consensus 211 ~~Grl~~d~~ 220 (223)
T COG2884 211 EDGRLVRDES 220 (223)
T ss_pred eCCEEEeccc
Confidence 9999987643
No 153
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-36 Score=345.81 Aligned_cols=218 Identities=23% Similarity=0.348 Sum_probs=179.3
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
++++|+++.++... ...+.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKP--TSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CccEEEECCEECC
Confidence 56777776553110 0124699999999999999999999999999999999998765 5899999998764
Q ss_pred c-----ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc--ccccccccCCCCCC
Q 000517 929 Q-----ETFARVSGYCEQTDI-HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD--AIKDSLVGIPGVNG 1000 (1449)
Q Consensus 929 ~-----~~~~~~~gyv~Q~d~-~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~--~~~~~~vg~~~~~~ 1000 (1449)
. ...++.+|||+|++. .+...||+||+.|..... ....++..+.++++++.+||. +..++.+ +.
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~-----~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKSP-----FE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCCc-----cc
Confidence 2 234678999999863 334579999999865432 234455567789999999996 5566654 47
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000517 1001 LSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGR 1079 (1449)
Q Consensus 1001 LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~ 1079 (1449)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++...+|++++|. +|+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~-~G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMN-KGK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCE
Confidence 9999999999999999999999999999999999999999999999765 899999999975 4667899999998 589
Q ss_pred EEEecCC
Q 000517 1080 IIYCGPL 1086 (1449)
Q Consensus 1080 ~v~~G~~ 1086 (1449)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9999986
No 154
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=6.4e-36 Score=334.97 Aligned_cols=199 Identities=26% Similarity=0.440 Sum_probs=168.9
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccc---c-ccceEEEEccCCCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQE---T-FARVSGYCEQTDIHSPNI 949 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~---~-~~~~~gyv~Q~d~~~~~l 949 (1449)
+.+|+|+||++++||++||+||||||||||+++|+|...+ .+|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPP--RSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 4699999999999999999999999999999999998764 589999999865321 1 245699999999999999
Q ss_pred CHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHc-CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000517 950 TVEESVIFSAWLRLAPEINSKTKAEFVNEVLETI-ELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1028 (1449)
Q Consensus 950 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPT 1028 (1449)
|++||+.+...... .....+.+.++++.+ ++.+..++.+ +.||||||||++|||+|+.+|++|+|||||
T Consensus 91 t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt 160 (222)
T cd03224 91 TVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQLA-----GTLSGGEQQMLAIARALMSRPKLLLLDEPS 160 (222)
T ss_pred cHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCch-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 99999988654321 122344567788887 5766666654 379999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1029 TGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1029 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
+|||+.++..+++.|+++++.|+|||+++|+++ ++...+|++++|. +|+++..|+.
T Consensus 161 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 216 (222)
T cd03224 161 EGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLE-RGRVVLEGTA 216 (222)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEee-CCeEEEeCCH
Confidence 999999999999999999877899999999986 5678899999997 5899998875
No 155
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=6.8e-36 Score=332.76 Aligned_cols=192 Identities=28% Similarity=0.381 Sum_probs=165.7
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTDIHSP 947 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d~~~~ 947 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++.+++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTP--SRGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLP 92 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcccCCHHHHHHHHhheEEEecChhhcc
Confidence 4699999999999999999999999999999999998654 58999999987532 124567999999999888
Q ss_pred CCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000517 948 NITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1027 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEP 1027 (1449)
.+|+.||+.+....+. ......++.++++++.++|.+..++.+. .||||||||++||++|+.+|++|+||||
T Consensus 93 ~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~lllLDEP 164 (214)
T TIGR02673 93 DRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFPE-----QLSGGEQQRVAIARAIVNSPPLLLADEP 164 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence 9999999988754321 2233445678899999999877676653 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 1028 TTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 1028 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
|+|||+.++..+.+.|++++++|+|||++||+++ ++...+|++++|.+
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~ 212 (214)
T TIGR02673 165 TGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDD 212 (214)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecC
Confidence 9999999999999999998777999999999986 57778999999974
No 156
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.4e-36 Score=317.98 Aligned_cols=208 Identities=25% Similarity=0.394 Sum_probs=189.1
Q ss_pred cccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCC
Q 000517 867 RGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHS 946 (1449)
Q Consensus 867 ~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~ 946 (1449)
+++..+++.+++|+||.++||+++|++|+|||||||++++|.|...+ .+|+|.++|.+... ..+.+|||.|.+..++
T Consensus 8 vtK~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~--~~G~I~~~g~~~~~-~~~~rIGyLPEERGLy 84 (300)
T COG4152 8 VTKSFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEP--TEGEITWNGGPLSQ-EIKNRIGYLPEERGLY 84 (300)
T ss_pred chhccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCc--cCceEEEcCcchhh-hhhhhcccChhhhccC
Confidence 34455678899999999999999999999999999999999998765 58999999998754 3456799999999999
Q ss_pred CCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000517 947 PNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1026 (1449)
Q Consensus 947 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDE 1026 (1449)
|.+||.|.|.|-|.++. ++.++.++.++.+|+++++......+|. .||-|++|++.+-.+++++|++++|||
T Consensus 85 ~k~tv~dql~yla~LkG---m~~~e~~~~~~~wLer~~i~~~~~~kIk-----~LSKGnqQKIQfisaviHePeLlILDE 156 (300)
T COG4152 85 PKMTVEDQLKYLAELKG---MPKAEIQKKLQAWLERLEIVGKKTKKIK-----ELSKGNQQKIQFISAVIHEPELLILDE 156 (300)
T ss_pred ccCcHHHHHHHHHHhcC---CcHHHHHHHHHHHHHhccccccccchHH-----HhhhhhhHHHHHHHHHhcCCCEEEecC
Confidence 99999999999999874 5567788889999999999998888764 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1027 PTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1027 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
|.|||||.+.+.+-+.+.++++.|.|||+++|+++ .+.++||++++|+ +|+.|.+|+..
T Consensus 157 PFSGLDPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~-kG~~V~~G~v~ 215 (300)
T COG4152 157 PFSGLDPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLK-KGQTVLYGTVE 215 (300)
T ss_pred CccCCChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheec-CCceEEeccHH
Confidence 99999999999999999999999999999999986 6889999999998 58999999973
No 157
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-36 Score=353.09 Aligned_cols=206 Identities=24% Similarity=0.364 Sum_probs=176.3
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC------CceEEEEcCCCccC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP------PKTSAYISQNDLHI 257 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 257 (1449)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 46999999999999999999999999999999999999997 9999999998765322 45799999999999
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGN 337 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 337 (1449)
+.+||+||+.+.....+... .+ ....++.+++.+||++..++.+++
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~ 140 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------AE------------------------IKARVTELLELVGLSDKADRYPAQ 140 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCchhhhCChhh
Confidence 99999999998765432110 00 011346689999999888887765
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++. |..+++.++||+|++|
T Consensus 141 -----LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvt-H~~~~i~~~~d~v~~l 214 (343)
T PRK11153 141 -----LSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLIT-HEMDVVKRICDRVAVI 214 (343)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999999765567776654 5567888999999999
Q ss_pred eCCeEEEecChhhHH
Q 000517 418 AEGKIVYHGPQDHVL 432 (1449)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1449)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999988874
No 158
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=6.5e-36 Score=332.62 Aligned_cols=199 Identities=28% Similarity=0.467 Sum_probs=164.8
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCC--CCCCH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHS--PNITV 951 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~--~~lTv 951 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.. ..++.++|++|++.+. +..||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKP--TSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 4699999999999999999999999999999999998654 5899999998653 3456799999998653 34899
Q ss_pred HHHHHHHHHhccC-CCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000517 952 EESVIFSAWLRLA-PEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTG 1030 (1449)
Q Consensus 952 ~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsg 1030 (1449)
+||+.+....+.. .....+...+.++++++.+++.+..++.++ .||||||||++||+||+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQIG-----ELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875332110 001122344678899999999877777654 7999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1031 LDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1031 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|. +| +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~-~~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLN-RT-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEc-Cc-EeecC
Confidence 9999999999999999877999999999986 5677899999996 44 66654
No 159
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=341.87 Aligned_cols=214 Identities=28% Similarity=0.358 Sum_probs=179.1
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|+++.++ ++..+|+|+|++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 70 (274)
T PRK13647 5 IEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLP--QRGRVKVMGREVN 70 (274)
T ss_pred EEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 56777766542 123599999999999999999999999999999999998665 5899999998753
Q ss_pred c---ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000517 929 Q---ETFARVSGYCEQTDI-HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 929 ~---~~~~~~~gyv~Q~d~-~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1004 (1449)
. ...++.+||++|++. .++..||.||+.|..... .......++.++++++.++|.+..++.+. .||||
T Consensus 71 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----~LSgG 142 (274)
T PRK13647 71 AENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPPY-----HLSYG 142 (274)
T ss_pred CCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCChh-----hCCHH
Confidence 2 234567999999863 445689999998864321 22334445678899999999888877754 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ .+.+.+|++++|+ +|++++.|
T Consensus 143 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~-~G~i~~~g 220 (274)
T PRK13647 143 QKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLK-EGRVLAEG 220 (274)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEC
Confidence 999999999999999999999999999999999999999999877999999999976 4668899999997 58999999
Q ss_pred CC
Q 000517 1085 PL 1086 (1449)
Q Consensus 1085 ~~ 1086 (1449)
+.
T Consensus 221 ~~ 222 (274)
T PRK13647 221 DK 222 (274)
T ss_pred CH
Confidence 86
No 160
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-35 Score=344.59 Aligned_cols=218 Identities=24% Similarity=0.345 Sum_probs=178.7
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
++++|++++++... .....+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|+++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQP--TSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 56777777653210 0114599999999999999999999999999999999998765 5899999998753
Q ss_pred c-------ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000517 929 Q-------ETFARVSGYCEQTDI-HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGVN 999 (1449)
Q Consensus 929 ~-------~~~~~~~gyv~Q~d~-~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 999 (1449)
. ..+++.+|||+|++. .+...||+||+.|+.... ....++..+.++++++.++|. +..++.+ +
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARSP-----F 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCCc-----c
Confidence 1 234567999999862 233579999999875432 223444556789999999996 5566654 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000517 1000 GLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGG 1078 (1449)
Q Consensus 1000 ~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG 1078 (1449)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.+|++++|. +|
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~-~G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMH-KG 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CC
Confidence 79999999999999999999999999999999999999999999999764 899999999986 5778899999997 58
Q ss_pred EEEEecCC
Q 000517 1079 RIIYCGPL 1086 (1449)
Q Consensus 1079 ~~v~~G~~ 1086 (1449)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999986
No 161
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.2e-35 Score=341.77 Aligned_cols=216 Identities=20% Similarity=0.311 Sum_probs=180.2
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|+++.+ +++.+|+|+||+|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTR-------------GNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP--DHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEc
Confidence 36677777654 234699999999999999999999999999999999998654 589999999865
Q ss_pred cc------ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000517 928 VQ------ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGL 1001 (1449)
Q Consensus 928 ~~------~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 1001 (1449)
.. ...++.++|++|+..+++.+||.||+.+...... ........+.+.++++.++|.+..++.++ .|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMPS-----EL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCChh-----hC
Confidence 32 1235679999999988899999999987643211 12233344567889999999887777654 79
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEE
Q 000517 1002 STEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRI 1080 (1449)
Q Consensus 1002 SgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~ 1080 (1449)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.+|++++|. +|++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~-~G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVA-DKKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEE-CCEE
Confidence 999999999999999999999999999999999999999999999765 899999999975 5778899999997 5899
Q ss_pred EEecCCC
Q 000517 1081 IYCGPLG 1087 (1449)
Q Consensus 1081 v~~G~~~ 1087 (1449)
++.|+..
T Consensus 223 ~~~g~~~ 229 (269)
T PRK11831 223 VAHGSAQ 229 (269)
T ss_pred EEeCCHH
Confidence 9998863
No 162
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=8.2e-36 Score=332.17 Aligned_cols=194 Identities=27% Similarity=0.362 Sum_probs=166.9
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTDIHSP 947 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d~~~~ 947 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELP--TSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 4699999999999999999999999999999999998654 58999999986532 124567999999999999
Q ss_pred CCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000517 948 NITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1027 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEP 1027 (1449)
.+|++||+.+....+. ...+..++.++++++.+||.+..++.++ .||||||||++||++|+.+|++++||||
T Consensus 92 ~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllDEP 163 (214)
T cd03292 92 DRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALPA-----ELSGGEQQRVAIARAIVNSPTILIADEP 163 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCChh-----hcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988754332 2233445678899999999887777653 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000517 1028 TTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGR 1079 (1449)
Q Consensus 1028 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~ 1079 (1449)
|+|||+.++..+.+.|++++++|+|||+++|++. .+.+.+|++++|.+ |+
T Consensus 164 t~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 164 TGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999777999999999985 46677999999974 65
No 163
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-36 Score=331.16 Aligned_cols=197 Identities=35% Similarity=0.524 Sum_probs=169.0
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEccCCCCCCCCCH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHSPNITV 951 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 951 (1449)
+.+|+|+|+++++| +++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPP--SSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 46999999999999 9999999999999999999998654 58999999987532 2345679999999999999999
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000517 952 EESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGL 1031 (1449)
Q Consensus 952 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgL 1031 (1449)
.||+.+....+. ....+..+.++++++.++|.+..++.++ .||||||||++||++|+.+|++|+|||||+||
T Consensus 90 ~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~llllDEPt~~L 161 (211)
T cd03264 90 REFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKIG-----SLSGGMRRRVGIAQALVGDPSILIVDEPTAGL 161 (211)
T ss_pred HHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCchh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 999988655432 2223345678899999999887777654 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1032 DARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1032 D~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
|+.++..+.+.|+++++ +.|||+++|++. .+.+.+|++++|+ +|++++.|
T Consensus 162 D~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~-~g~i~~~g 211 (211)
T cd03264 162 DPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLN-KGKLVFEG 211 (211)
T ss_pred CHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEE-CCEEEecC
Confidence 99999999999999976 599999999986 4667899999998 58988765
No 164
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-35 Score=345.07 Aligned_cols=219 Identities=23% Similarity=0.344 Sum_probs=179.5
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|+++.++... .....+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 56777777653210 0113599999999999999999999999999999999998765 4799999986531
Q ss_pred ---------------------------cccccceEEEEccCC-CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHH
Q 000517 929 ---------------------------QETFARVSGYCEQTD-IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVL 980 (1449)
Q Consensus 929 ---------------------------~~~~~~~~gyv~Q~d-~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l 980 (1449)
....++.+|||+|++ ..+...||+|++.|+.... ....++..+++.+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 123467799999985 3344579999999875432 234455567789999
Q ss_pred HHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecC
Q 000517 981 ETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQ 1059 (1449)
Q Consensus 981 ~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~ 1059 (1449)
+.+||. +..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++.|+|||++||+
T Consensus 150 ~~~gL~~~~~~~~~-----~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRSP-----FELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 5667664 4799999999999999999999999999999999999999999999998779999999999
Q ss_pred ccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1060 PSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1060 p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
++ .+.+.+|++++|. +|++++.|++.
T Consensus 225 ~~-~~~~~adrv~vl~-~G~i~~~g~~~ 250 (305)
T PRK13651 225 LD-NVLEWTKRTIFFK-DGKIIKDGDTY 250 (305)
T ss_pred HH-HHHHhCCEEEEEE-CCEEEEECCHH
Confidence 76 4778899999997 58999999863
No 165
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-35 Score=330.23 Aligned_cols=200 Identities=27% Similarity=0.466 Sum_probs=167.9
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCCH
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMTV 262 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 262 (1449)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 35899999999999999999999999999999999999987 9999999988754322 4579999999888999999
Q ss_pred HHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccccc
Q 000517 263 RETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRG 342 (1449)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 342 (1449)
+||+.++....+.. ..+ .+..++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (213)
T cd03259 90 AENIAFGLKLRGVP----------KAE------------------------IRARVRELLELVGLEGLLNRYPHE----- 130 (213)
T ss_pred HHHHHhHHHHcCCC----------HHH------------------------HHHHHHHHHHHcCChhhhhcChhh-----
Confidence 99998865432110 000 011245678899998888887765
Q ss_pred CChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeE
Q 000517 343 ISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKI 422 (1449)
Q Consensus 343 lSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~i 422 (1449)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..++|+|++ +|..+++.+++|+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~-sH~~~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYV-THDQEEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEE-ecCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999876446676665 4556788899999999999999
Q ss_pred EEec
Q 000517 423 VYHG 426 (1449)
Q Consensus 423 v~~G 426 (1449)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 166
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-35 Score=337.47 Aligned_cols=203 Identities=25% Similarity=0.402 Sum_probs=173.2
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc----ccccceEEEEccCCCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ----ETFARVSGYCEQTDIHSPNI 949 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d~~~~~l 949 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 93 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPR--DAGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRL 93 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccC
Confidence 4699999999999999999999999999999999998654 58999999987532 12356799999999888889
Q ss_pred CHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000517 950 TVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTT 1029 (1449)
Q Consensus 950 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTs 1029 (1449)
||.||+.+...++. ....+..+..++++++.+++.+..+..+ +.||||||||++||++|+.+|++|+|||||+
T Consensus 94 tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~ 166 (241)
T PRK10895 94 SVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSMG-----QSLSGGERRRVEIARALAANPKFILLDEPFA 166 (241)
T ss_pred cHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999987643321 1223344567889999999987766654 3799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1030 GLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1030 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
|||+.++..+.+.++++++.|+|||+++|++. ++.+.+|++++|. +|++++.|+.+
T Consensus 167 ~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~-~G~i~~~~~~~ 222 (241)
T PRK10895 167 GVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVS-QGHLIAHGTPT 222 (241)
T ss_pred cCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEe-CCeEEeeCCHH
Confidence 99999999999999998877999999999985 5778899999997 58999998863
No 167
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=342.75 Aligned_cols=218 Identities=28% Similarity=0.404 Sum_probs=179.2
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|+++.++.. ....+.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPN--------SPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQP--TEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 4677777765311 00113599999999999999999999999999999999998765 5899999998753
Q ss_pred c-------ccccceEEEEccCC--CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000517 929 Q-------ETFARVSGYCEQTD--IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGV 998 (1449)
Q Consensus 929 ~-------~~~~~~~gyv~Q~d--~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 998 (1449)
. ..+++.+|||+|++ .++ ..||.|++.|..... ..+..+.++++.++++.++|. +..++.+
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~----- 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLF-EETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKSP----- 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhcc-cchHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCCc-----
Confidence 1 23567899999986 344 469999999875432 223455567789999999996 4556553
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000517 999 NGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGG 1078 (1449)
Q Consensus 999 ~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG 1078 (1449)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|. +|
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~-~G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLE-KG 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEE-CC
Confidence 479999999999999999999999999999999999999999999999877999999999985 5678899999997 58
Q ss_pred EEEEecCCC
Q 000517 1079 RIIYCGPLG 1087 (1449)
Q Consensus 1079 ~~v~~G~~~ 1087 (1449)
++++.|++.
T Consensus 221 ~i~~~g~~~ 229 (288)
T PRK13643 221 HIISCGTPS 229 (288)
T ss_pred EEEEECCHH
Confidence 999999863
No 168
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1e-35 Score=331.12 Aligned_cols=195 Identities=26% Similarity=0.389 Sum_probs=166.8
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-----ccccceEEEEccCCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-----ETFARVSGYCEQTDIHSPN 948 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-----~~~~~~~gyv~Q~d~~~~~ 948 (1449)
+.+|+++|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++.+++.
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEP--DSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPH 90 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCccchhHHHHHhcceEEecccccCCC
Confidence 4699999999999999999999999999999999998654 58999999987521 2346789999999999999
Q ss_pred CCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000517 949 ITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1028 (1449)
Q Consensus 949 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPT 1028 (1449)
+|+.||+.+...... ....+...+.++++++.+|+.+..++.+ ..||||||||++||++|+.+|++|+|||||
T Consensus 91 ~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~ 163 (213)
T cd03262 91 LTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGGQQQRVAIARALAMNPKVMLFDEPT 163 (213)
T ss_pred CcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 999999987643111 1223344567889999999988777765 379999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000517 1029 TGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGR 1079 (1449)
Q Consensus 1029 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~ 1079 (1449)
+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 164 ~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 164 SALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred cCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 999999999999999999877999999999986 56778999999974 65
No 169
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.5e-35 Score=333.29 Aligned_cols=200 Identities=25% Similarity=0.352 Sum_probs=164.4
Q ss_pred eeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCC--CCC
Q 000517 875 RLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTD--IHS 946 (1449)
Q Consensus 875 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d--~~~ 946 (1449)
.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++.. ..+++.++|++|++ .+.
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKP--TSGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLN 96 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEccccchhhHHHhhccEEEEecCchhhcC
Confidence 699999999999999999999999999999999998654 58999999987532 23456899999998 456
Q ss_pred CCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000517 947 PNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMD 1025 (1449)
Q Consensus 947 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLD 1025 (1449)
+.+||+||+.+....... ....+.....++++++.+++. +..+..+ ..||||||||++|||+|+.+|++|+||
T Consensus 97 ~~~tv~~nl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLD 170 (228)
T cd03257 97 PRMTIGEQIAEPLRIHGK-LSKKEARKEAVLLLLVGVGLPEEVLNRYP-----HELSGGQRQRVAIARALALNPKLLIAD 170 (228)
T ss_pred CcCCHHHHHHHHHHhccC-CcHHHHHHHHHHHHHHHCCCChhHhhCCc-----hhcCHHHHHHHHHHHHHhcCCCEEEec
Confidence 789999999876543321 111111122235789999995 4556554 379999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1026 EPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1026 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
|||+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|. +|+++..|
T Consensus 171 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g 228 (228)
T cd03257 171 EPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMY-AGKIVEEG 228 (228)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEe-CCEEEecC
Confidence 999999999999999999999765 899999999986 4666899999997 58988754
No 170
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=345.88 Aligned_cols=219 Identities=23% Similarity=0.339 Sum_probs=179.5
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++++|+++.++... .....+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p--~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKS--KYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCEEc
Confidence 477888887664210 0123599999999999999999999999999999999998765 589999999764
Q ss_pred cc-------------------ccccceEEEEccCC--CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc
Q 000517 928 VQ-------------------ETFARVSGYCEQTD--IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD 986 (1449)
Q Consensus 928 ~~-------------------~~~~~~~gyv~Q~d--~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~ 986 (1449)
.. ..+++.+|||+|++ .+++ .||+||+.|+.... ..+.++..+++.++++.+||.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 23567899999986 3554 59999998864322 223444556788999999996
Q ss_pred -ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHH
Q 000517 987 -AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIF 1065 (1449)
Q Consensus 987 -~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~ 1065 (1449)
+..++.+ ..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ .+.
T Consensus 167 ~~~~~~~~-----~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERSP-----FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 4555543 479999999999999999999999999999999999999999999999877999999999976 467
Q ss_pred HhcCeEEEEecCcEEEEecCCC
Q 000517 1066 EAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1066 ~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
+.+|++++|. +|+++..|+..
T Consensus 241 ~~adri~vl~-~G~i~~~g~~~ 261 (320)
T PRK13631 241 EVADEVIVMD-KGKILKTGTPY 261 (320)
T ss_pred HhCCEEEEEE-CCEEEEeCCHH
Confidence 8899999998 58999999863
No 171
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-35 Score=333.30 Aligned_cols=209 Identities=25% Similarity=0.412 Sum_probs=173.0
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCCHH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMTVR 263 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 263 (1449)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 16 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 92 (239)
T cd03296 16 VALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTVF 92 (239)
T ss_pred EeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCHH
Confidence 5899999999999999999999999999999999999987 9999999988754322 45799999999888999999
Q ss_pred HHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccC
Q 000517 264 ETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGI 343 (1449)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGl 343 (1449)
||+.++....+...+. ...+ ....++.+++.+||++..++.+++ |
T Consensus 93 e~l~~~~~~~~~~~~~------~~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----L 137 (239)
T cd03296 93 DNVAFGLRVKPRSERP------PEAE------------------------IRAKVHELLKLVQLDWLADRYPAQ-----L 137 (239)
T ss_pred HHHhhhhhhccccccC------CHHH------------------------HHHHHHHHHHHcCChhhhhcChhh-----C
Confidence 9999865432110000 0000 011245678999998877877765 9
Q ss_pred ChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEE
Q 000517 344 SGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIV 423 (1449)
Q Consensus 344 SGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv 423 (1449)
||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..++|+|++.|+ ..++.+.+|+|++|++|+++
T Consensus 138 S~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~-~~~~~~~~d~i~~l~~G~i~ 216 (239)
T cd03296 138 SGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHD-QEEALEVADRVVVMNKGRIE 216 (239)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhCCEEEEEECCeEE
Confidence 99999999999999999999999999999999999999999999876446777776554 56788999999999999999
Q ss_pred EecChhhHH
Q 000517 424 YHGPQDHVL 432 (1449)
Q Consensus 424 ~~G~~~~~~ 432 (1449)
+.|+.+++.
T Consensus 217 ~~~~~~~~~ 225 (239)
T cd03296 217 QVGTPDEVY 225 (239)
T ss_pred EecCHHHHh
Confidence 999987763
No 172
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-35 Score=330.52 Aligned_cols=205 Identities=29% Similarity=0.395 Sum_probs=172.3
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC--CCceEEEEcCCCccCCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV--PPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1449)
.++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 35899999999999999999999999999999999999987 999999998764321 1357999999998999999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+||+.+.....+... .+ ....++.+++.+||++..++.+++
T Consensus 90 v~~~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~---- 131 (220)
T cd03265 90 GWENLYIHARLYGVPG----------AE------------------------RRERIDELLDFVGLLEAADRLVKT---- 131 (220)
T ss_pred HHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCHHHhhCChhh----
Confidence 9999998754332110 00 011346689999998888888776
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+..++|+|++ +|..+++.+++|++++|.+|+
T Consensus 132 -LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~-tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 132 -YSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLT-THYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999999876446666665 566778889999999999999
Q ss_pred EEEecChhhH
Q 000517 422 IVYHGPQDHV 431 (1449)
Q Consensus 422 iv~~G~~~~~ 431 (1449)
++..|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03265 210 IIAEGTPEEL 219 (220)
T ss_pred EEEeCChHHc
Confidence 9999987653
No 173
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.9e-35 Score=334.06 Aligned_cols=200 Identities=29% Similarity=0.452 Sum_probs=170.3
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEccCCCCCCCCCH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHSPNITV 951 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 951 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~ 91 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVA--QEGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSV 91 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcH
Confidence 4699999999999999999999999999999999998654 58999999986532 1223579999999988889999
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000517 952 EESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGL 1031 (1449)
Q Consensus 952 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgL 1031 (1449)
+||+.+....+ ........+.++++++.+||.+..++.++ .||||||||++|||+|+.+|++++|||||+||
T Consensus 92 ~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~laral~~~p~llllDEP~~~L 163 (236)
T TIGR03864 92 RQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKVR-----ELNGGHRRRVEIARALLHRPALLLLDEPTVGL 163 (236)
T ss_pred HHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCC
Confidence 99998765432 12233445678899999999887777654 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1032 DARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1032 D~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|+.++..+.+.|+++++ .|+|||+++|+++. + ..+|++++|. +|++++.|+.
T Consensus 164 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~i~~l~-~G~i~~~~~~ 216 (236)
T TIGR03864 164 DPASRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDRLVVLH-RGRVLADGAA 216 (236)
T ss_pred CHHHHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCEEEEEe-CCeEEEeCCH
Confidence 99999999999999975 58999999999863 4 4599999997 5899998875
No 174
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.2e-35 Score=344.61 Aligned_cols=204 Identities=21% Similarity=0.296 Sum_probs=173.7
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCC--CC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTD--IH 945 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d--~~ 945 (1449)
..+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++.. ..+++.++||+|++ .+
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~l 111 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLASL 111 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEECCcCCHHHHHHHhCceEEEecCchhhc
Confidence 5699999999999999999999999999999999998765 58999999987532 12456799999997 57
Q ss_pred CCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 946 SPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 946 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
+|.+||.|++.+...... ...+.++.++.+.++++.++|. +..++.. ..||||||||++||+||+.+|++|++
T Consensus 112 ~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~p-----~~LSgG~~QRv~iArAL~~~P~llil 185 (331)
T PRK15079 112 NPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRYP-----HEFSGGQCQRIGIARALILEPKLIIC 185 (331)
T ss_pred CCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 889999999988654321 1234455667788999999994 3555553 47999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
||||+|||+.++..+++.|+++.++ |.|+|++|||++ .+.+.+|++++|. +|++++.|+..
T Consensus 186 DEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~-~G~ive~g~~~ 247 (331)
T PRK15079 186 DEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMY-LGHAVELGTYD 247 (331)
T ss_pred eCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEEcCHH
Confidence 9999999999999999999999764 999999999986 4667899999997 58999999863
No 175
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2e-35 Score=330.86 Aligned_cols=196 Identities=25% Similarity=0.328 Sum_probs=167.4
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---c---cccceEEEEccCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---E---TFARVSGYCEQTDIHSP 947 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~---~~~~~~gyv~Q~d~~~~ 947 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... . .+++.++|++|++.+++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERP--SAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLM 92 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccCChhHHHHHHhheEEEecCccccc
Confidence 4699999999999999999999999999999999998654 58999999986532 1 24567999999998888
Q ss_pred CCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000517 948 NITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1027 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEP 1027 (1449)
..|+.||+.+....+ ....++..+.++++++.+++.+..++.+ ..||||||||++||+||+.+|++|+||||
T Consensus 93 ~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 164 (222)
T PRK10908 93 DRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNFP-----IQLSGGEQQRVGIARAVVNKPAVLLADEP 164 (222)
T ss_pred cccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----hhCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 999999998865433 1223344456788999999988777664 37999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEE
Q 000517 1028 TTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRII 1081 (1449)
Q Consensus 1028 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v 1081 (1449)
|+|||+.++..+.+.|++++++|.|||++||+++ ++...+|++++|. +|+++
T Consensus 165 t~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~ 216 (222)
T PRK10908 165 TGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLS-DGHLH 216 (222)
T ss_pred CCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEc
Confidence 9999999999999999999777899999999986 4667789999998 47764
No 176
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.4e-35 Score=329.58 Aligned_cols=192 Identities=29% Similarity=0.416 Sum_probs=163.0
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCC-CCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDI-HSPNI 949 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~-~~~~l 949 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGP--TSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 4699999999999999999999999999999999998654 58999999986532 234567999999974 36678
Q ss_pred CHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000517 950 TVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTT 1029 (1449)
Q Consensus 950 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTs 1029 (1449)
|++||+.+....+ ........+.++++++.++|.+..++.++ .||||||||++|||||+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSPF-----TLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998765332 12233344568899999999877776653 799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 1030 GLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 1030 gLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
|||+.++..+.+.|++++++|+|||++||++. ++...+|++++|.+
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~ 209 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLED 209 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC
Confidence 99999999999999999877999999999986 56677999999975
No 177
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.6e-35 Score=330.18 Aligned_cols=198 Identities=23% Similarity=0.376 Sum_probs=171.4
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCHHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEE 953 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~e 953 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..... ++.++|++|++.+++.+|++|
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRP--TSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 4699999999999999999999999999999999998654 5899999998754322 257899999998888899999
Q ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000517 954 SVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDA 1033 (1449)
Q Consensus 954 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~ 1033 (1449)
|+.+....+. .. ++.+.++++.+||.+..+..++ .||||||||++||++++.+|++|+|||||+|||+
T Consensus 90 ~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~~rv~laral~~~p~llllDEP~~~LD~ 157 (223)
T TIGR03740 90 NLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKAK-----QFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDP 157 (223)
T ss_pred HHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhHh-----hCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCH
Confidence 9987654331 11 2357889999999887777653 7999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1034 RAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1034 ~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
.++..+++.|++++++|+|||++||+++ ++.+.+|++++|. +|++++.|++.+
T Consensus 158 ~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~~~ 210 (223)
T TIGR03740 158 IGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIIS-EGVLGYQGKINK 210 (223)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEe-CCEEEEecChhh
Confidence 9999999999999877999999999986 5678899999997 589999998753
No 178
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.5e-35 Score=335.44 Aligned_cols=202 Identities=25% Similarity=0.344 Sum_probs=170.3
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCccCcc-----ccccceEEEEccCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISGYPKVQ-----ETFARVSGYCEQTDIH 945 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G~~~~~-----~~~~~~~gyv~Q~d~~ 945 (1449)
..+|+|+|++|++||+++|+|+||||||||+++|+|...+. ..+|+|.++|.+... ...++.++|++|++.+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 93 (247)
T TIGR00972 14 KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNP 93 (247)
T ss_pred eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCccc
Confidence 45999999999999999999999999999999999986542 127999999987532 2345679999999888
Q ss_pred CCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc----ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000517 946 SPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD----AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSI 1021 (1449)
Q Consensus 946 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~i 1021 (1449)
++ .|++||+.+....+. ........+.++++++.+||. +..++.+ ..||||||||++|||+|+.+|++
T Consensus 94 ~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~LSgG~~qrv~laral~~~p~l 165 (247)
T TIGR00972 94 FP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDSA-----LGLSGGQQQRLCIARALAVEPEV 165 (247)
T ss_pred CC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCE
Confidence 88 999999988654431 112344456788999999997 5555543 47999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1022 IFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1022 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++++|+ +|++++.|+.
T Consensus 166 lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 227 (247)
T TIGR00972 166 LLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFY-DGELVEYGPT 227 (247)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999999876 589999999986 5778899999998 5899999875
No 179
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=340.71 Aligned_cols=216 Identities=24% Similarity=0.344 Sum_probs=180.8
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|+++.++.. +...+|+|+|++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 72 (279)
T PRK13650 5 IEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEA--ESGQIIIDGDLLT 72 (279)
T ss_pred EEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECC
Confidence 6677777665311 123599999999999999999999999999999999998765 5899999998753
Q ss_pred c---ccccceEEEEccCC-CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000517 929 Q---ETFARVSGYCEQTD-IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 929 ~---~~~~~~~gyv~Q~d-~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1004 (1449)
. ...++.+||++|++ ..++..||+||+.|..... ....++..+.++++++.+||.+..+..++ .||||
T Consensus 73 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LSgG 144 (279)
T PRK13650 73 EENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREPA-----RLSGG 144 (279)
T ss_pred cCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCcc-----cCCHH
Confidence 2 23556799999997 3667789999999865432 23344556778999999999987777754 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYC 1083 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~ 1083 (1449)
||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++ ..+|++++|. +|+++..
T Consensus 145 q~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~-~G~i~~~ 221 (279)
T PRK13650 145 QKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMK-NGQVEST 221 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEE-CCEEEEE
Confidence 999999999999999999999999999999999999999999875 999999999976 34 5799999997 5899999
Q ss_pred cCCC
Q 000517 1084 GPLG 1087 (1449)
Q Consensus 1084 G~~~ 1087 (1449)
|+++
T Consensus 222 g~~~ 225 (279)
T PRK13650 222 STPR 225 (279)
T ss_pred CCHH
Confidence 9863
No 180
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-35 Score=341.16 Aligned_cols=217 Identities=23% Similarity=0.358 Sum_probs=178.2
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~i~ 72 (286)
T PRK13646 3 IRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKP--TTGTVTVDDITIT 72 (286)
T ss_pred EEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 56777776653110 0123599999999999999999999999999999999998765 5899999998753
Q ss_pred c-------ccccceEEEEccCC--CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000517 929 Q-------ETFARVSGYCEQTD--IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGV 998 (1449)
Q Consensus 929 ~-------~~~~~~~gyv~Q~d--~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 998 (1449)
. ..+++.+|||+|++ .+++ .||.||+.|..... ....++..+++.++++.+||. +..++.+
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~----- 143 (286)
T PRK13646 73 HKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQSP----- 143 (286)
T ss_pred cccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCc-----
Confidence 2 23567899999986 3444 59999999865332 223445566789999999996 5666654
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 999 NGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 999 ~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|. +
T Consensus 144 ~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~-~ 221 (286)
T PRK13646 144 FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMK-E 221 (286)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEE-C
Confidence 47999999999999999999999999999999999999999999999975 4899999999976 4678899999998 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|++++.|++
T Consensus 222 G~i~~~g~~ 230 (286)
T PRK13646 222 GSIVSQTSP 230 (286)
T ss_pred CEEEEECCH
Confidence 899999986
No 181
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.2e-35 Score=336.51 Aligned_cols=214 Identities=23% Similarity=0.295 Sum_probs=178.3
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 6 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 70 (257)
T PRK10619 6 LNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SEGSIVVNGQTIN 70 (257)
T ss_pred EEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEcc
Confidence 56677766542 34699999999999999999999999999999999998654 5799999997642
Q ss_pred c----------------ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccc-cc
Q 000517 929 Q----------------ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIK-DS 991 (1449)
Q Consensus 929 ~----------------~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-~~ 991 (1449)
. ..+++.++|++|++.+++.+|++||+.+...... ........+++.++++.+||.+.. +.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~ 148 (257)
T PRK10619 71 LVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQGK 148 (257)
T ss_pred cccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhhC
Confidence 1 2345679999999999999999999987542111 123344556788999999997653 54
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeE
Q 000517 992 LVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDEL 1071 (1449)
Q Consensus 992 ~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~ 1071 (1449)
.+ ..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||++||+++ ++...+|++
T Consensus 149 ~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~i 222 (257)
T PRK10619 149 YP-----VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSHV 222 (257)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEE
Confidence 43 479999999999999999999999999999999999999999999999877999999999986 466779999
Q ss_pred EEEecCcEEEEecCC
Q 000517 1072 ILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1072 ~~l~~gG~~v~~G~~ 1086 (1449)
++|. .|++++.|+.
T Consensus 223 ~~l~-~G~i~~~~~~ 236 (257)
T PRK10619 223 IFLH-QGKIEEEGAP 236 (257)
T ss_pred EEEE-CCEEEEeCCH
Confidence 9998 5899999875
No 182
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-35 Score=345.02 Aligned_cols=229 Identities=24% Similarity=0.390 Sum_probs=184.5
Q ss_pred cCCCCCCceEEEeeeEEEEEeeecCCCCCCCchhhhhhhhhccccccCccccccccccccceeeEEeCCeEEEEEcCCCC
Q 000517 129 VGIKLPTIEVRYKNLCVEAKCEVVHGKPLPTLWNSFKGMISVLPKLSGYKSLEAKINILNHVSGILKPGRMTLLLGPPGC 208 (1449)
Q Consensus 129 ~g~~~p~v~v~~~~L~v~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 208 (1449)
..+..|.=.|+|+|++.+-.. +++||+++||+|++||.+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~~---------------------------------k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYGP---------------------------------KRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeCC---------------------------------CCceecceeEEecCCCEEEEECCCCC
Confidence 466677777999988754322 23599999999999999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCCCHHHHHHHHHHccCCCCchhhhhHh
Q 000517 209 GKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEMTVRETVDFSARCQGVGSREETMMEV 285 (1449)
Q Consensus 209 GKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 285 (1449)
||||++++|.+.++ . +|+|.+||.++.+... |+.+|||||+..+| +-||.+|+.++.. ...++...++
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn~----sas~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGNP----SASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCCC----CcCHHHHHHH
Confidence 99999999999998 4 8999999999877654 67899999976655 5699999998642 1111222222
Q ss_pred cHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCChhhhhhHHHHHHHhCCCcEEE
Q 000517 286 SRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALF 365 (1449)
Q Consensus 286 ~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vll 365 (1449)
|++ .+. .|.+ ..|++..+|.||+.+. -|||||||||++|||++.+|+|++
T Consensus 461 ~k~---------------------a~~-----hd~i---~~l~~GY~T~VGerG~-~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKR---------------------AGL-----HDVI---SRLPDGYQTLVGERGL-MLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHH---------------------cCc-----HHHH---HhccccchhhHhhccc-ccccchHHHHHHHHHHhcCCCeEE
Confidence 221 111 1222 2388999999998432 299999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEEecChhhHHH
Q 000517 366 MDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVYHGPQDHVLA 433 (1449)
Q Consensus 366 LDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~~G~~~~~~~ 433 (1449)
+|||||.||+.|..++++.+.+. ..++|+|+..|.. .+..-||+|++|++|++...|++++++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~--~~~rTvI~IvH~l--~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDV--MSGRTVIMIVHRL--DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHh--cCCCeEEEEEecc--hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999884 3689999887654 5778999999999999999999999986
No 183
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=350.12 Aligned_cols=206 Identities=23% Similarity=0.355 Sum_probs=176.5
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-------CceEEEEcCCCcc
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-------PKTSAYISQNDLH 256 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 256 (1449)
..+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|++.+
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 45899999999999999999999999999999999999998 9999999998765432 2479999999999
Q ss_pred CCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccc
Q 000517 257 IAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVG 336 (1449)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 336 (1449)
++++||+||+.|+....+... .+ ....++++++.+||++..++.+.
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~----------~~------------------------~~~~~~e~L~~~gL~~~~~~~~~ 163 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINA----------EE------------------------RREKALDALRQVGLENYAHSYPD 163 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCCChhhhcCcc
Confidence 999999999999765433210 00 01124668999999888888876
Q ss_pred ccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEE
Q 000517 337 NAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIIL 416 (1449)
Q Consensus 337 ~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~l 416 (1449)
+ |||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+..++|+|++. |..+++.+++|+|++
T Consensus 164 ~-----LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivT-Hd~~~~~~~~Dri~v 237 (400)
T PRK10070 164 E-----LSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFIS-HDLDEAMRIGDRIAI 237 (400)
T ss_pred c-----CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEE-CCHHHHHHhCCEEEE
Confidence 5 9999999999999999999999999999999999999999999998765567776654 556788999999999
Q ss_pred EeCCeEEEecChhhHH
Q 000517 417 MAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 417 L~~G~iv~~G~~~~~~ 432 (1449)
|++|+++..|+++++.
T Consensus 238 L~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 238 MQNGEVVQVGTPDEIL 253 (400)
T ss_pred EECCEEEecCCHHHHH
Confidence 9999999999988774
No 184
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-35 Score=339.14 Aligned_cols=216 Identities=26% Similarity=0.371 Sum_probs=180.4
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++++|+++.++ +++.+|+|+|++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p--~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKP--SSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CccEEEECCEEC
Confidence 467788776542 124599999999999999999999999999999999998664 589999999875
Q ss_pred c-----cccccceEEEEccCCC-CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCC
Q 000517 928 V-----QETFARVSGYCEQTDI-HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGL 1001 (1449)
Q Consensus 928 ~-----~~~~~~~~gyv~Q~d~-~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 1001 (1449)
. ...+++.+||++|++. .+...||+||+.+..... ..+.....+.++++++.+||.+..++.++ .|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKPTH-----CL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCCcc-----cC
Confidence 2 1235678999999873 334689999998864322 22344445678999999999888777754 79
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEE
Q 000517 1002 STEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRI 1080 (1449)
Q Consensus 1002 SgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~ 1080 (1449)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|. +|++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~-~G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMK-EGRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEE-CCEE
Confidence 999999999999999999999999999999999999999999999865 899999999986 4667899999997 5899
Q ss_pred EEecCCC
Q 000517 1081 IYCGPLG 1087 (1449)
Q Consensus 1081 v~~G~~~ 1087 (1449)
++.|+..
T Consensus 221 ~~~g~~~ 227 (283)
T PRK13636 221 ILQGNPK 227 (283)
T ss_pred EEeCCHH
Confidence 9999863
No 185
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.8e-35 Score=326.55 Aligned_cols=199 Identities=27% Similarity=0.442 Sum_probs=168.6
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCCHH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMTVR 263 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 263 (1449)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 14 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 14 TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 5899999999999999999999999999999999999987 9999999988754322 35799999999888899999
Q ss_pred HHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccC
Q 000517 264 ETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGI 343 (1449)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGl 343 (1449)
||+.+.....+... .+ .+..++.+++.+||++..++.+++ |
T Consensus 91 ~~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----L 131 (213)
T cd03301 91 DNIAFGLKLRKVPK----------DE------------------------IDERVREVAELLQIEHLLDRKPKQ-----L 131 (213)
T ss_pred HHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCCHHHHhCChhh-----C
Confidence 99988754322100 00 011246678999998888888765 9
Q ss_pred ChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEE
Q 000517 344 SGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIV 423 (1449)
Q Consensus 344 SGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv 423 (1449)
|||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++. |..+++.+++|+|++|++|+++
T Consensus 132 S~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~s-H~~~~~~~~~d~i~~l~~g~~~ 210 (213)
T cd03301 132 SGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVT-HDQVEAMTMADRIAVMNDGQIQ 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEe-CCHHHHHHhcCeEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998765567777765 4556888999999999999999
Q ss_pred Eec
Q 000517 424 YHG 426 (1449)
Q Consensus 424 ~~G 426 (1449)
+.|
T Consensus 211 ~~g 213 (213)
T cd03301 211 QIG 213 (213)
T ss_pred ecC
Confidence 876
No 186
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=336.26 Aligned_cols=206 Identities=21% Similarity=0.297 Sum_probs=175.2
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|++++++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p--~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETP--SAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEH
Confidence 367788776542 24599999999999999999999999999999999998654 489999999764
Q ss_pred ccccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000517 928 VQETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRK 1007 (1449)
Q Consensus 928 ~~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1007 (1449)
. ..++.++|++|++.+++.+||+||+.+.. + . ..++.+.++++.++|.+..+..+ ..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~--~---~----~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGL--K---G----QWRDAALQALAAVGLADRANEWP-----AALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhcc--c---c----hHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHH
Confidence 2 34567999999998888899999998742 1 0 12356788999999988777664 379999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1008 RLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1008 Rl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ .+...+|++++|. +|++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~-~G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIE-EGKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999986 4677899999998 5899988765
No 187
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=337.37 Aligned_cols=217 Identities=22% Similarity=0.274 Sum_probs=178.3
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|+++.+ +++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 6 l~~~~l~~~~-------------~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 70 (255)
T PRK11300 6 LSVSGLMMRF-------------GGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKP--TGGTILLRGQHIE 70 (255)
T ss_pred EEEeeEEEEE-------------CCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CcceEEECCEECC
Confidence 5667776543 234699999999999999999999999999999999998654 5899999998753
Q ss_pred cc---c-ccceEEEEccCCCCCCCCCHHHHHHHHHHhccC----------CCC--ChHHHHHHHHHHHHHcCCccccccc
Q 000517 929 QE---T-FARVSGYCEQTDIHSPNITVEESVIFSAWLRLA----------PEI--NSKTKAEFVNEVLETIELDAIKDSL 992 (1449)
Q Consensus 929 ~~---~-~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~----------~~~--~~~~~~~~v~~~l~~l~L~~~~~~~ 992 (1449)
.. . .+..++|++|++.+++.+||+||+.+....... ... ......+.++++++.+||.+..++.
T Consensus 71 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 150 (255)
T PRK11300 71 GLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANRQ 150 (255)
T ss_pred CCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhCC
Confidence 21 1 234589999999999999999999986431110 000 1112335678899999998777776
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeE
Q 000517 993 VGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDEL 1071 (1449)
Q Consensus 993 vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~ 1071 (1449)
++ .||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++
T Consensus 151 ~~-----~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~i 224 (255)
T PRK11300 151 AG-----NLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDRI 224 (255)
T ss_pred hh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCEE
Confidence 54 79999999999999999999999999999999999999999999999775 899999999986 577889999
Q ss_pred EEEecCcEEEEecCCC
Q 000517 1072 ILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1072 ~~l~~gG~~v~~G~~~ 1087 (1449)
++|+ +|++++.|+.+
T Consensus 225 ~~l~-~g~i~~~~~~~ 239 (255)
T PRK11300 225 YVVN-QGTPLANGTPE 239 (255)
T ss_pred EEEE-CCeEEecCCHH
Confidence 9997 58999999864
No 188
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.7e-35 Score=329.62 Aligned_cols=195 Identities=27% Similarity=0.415 Sum_probs=164.8
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---cc---cc-ceEEEEccCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ET---FA-RVSGYCEQTDIHS 946 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~---~~-~~~gyv~Q~d~~~ 946 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... .. ++ +.++|++|++.++
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 95 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNP--TSGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLL 95 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccC
Confidence 4699999999999999999999999999999999998654 58999999987532 11 22 5799999999888
Q ss_pred CCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000517 947 PNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1026 (1449)
Q Consensus 947 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDE 1026 (1449)
+.+|++||+.+....+. .......+.+.++++.+||.+..++.++ .||||||||++|||+|+.+|++|+|||
T Consensus 96 ~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~illlDE 167 (221)
T TIGR02211 96 PDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRPS-----ELSGGERQRVAIARALVNQPSLVLADE 167 (221)
T ss_pred CCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHHHHHhCCCCEEEEeC
Confidence 89999999988654331 2223344567899999999887777653 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEE
Q 000517 1027 PTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRII 1081 (1449)
Q Consensus 1027 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v 1081 (1449)
||+|||+.++..+.+.|++++++ |+|||++||+++ .+ +.+|++++|. +|+++
T Consensus 168 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~-~G~i~ 220 (221)
T TIGR02211 168 PTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMK-DGQLF 220 (221)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEe-CCEec
Confidence 99999999999999999999764 899999999986 34 5579999998 57765
No 189
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=5.2e-35 Score=337.44 Aligned_cols=181 Identities=22% Similarity=0.275 Sum_probs=139.9
Q ss_pred eeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCHHHH
Q 000517 875 RLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEES 954 (1449)
Q Consensus 875 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~e~ 954 (1449)
+++.+++..++.-..++++|+||+||||+++++.|..++ ..|.+.+.+ |.+++|..|...-+..+.|.+-
T Consensus 378 ~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~--~rgi~~~~~--------r~ri~~f~Qhhvd~l~~~v~~v 447 (582)
T KOG0062|consen 378 QWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTP--TRGIVGRHP--------RLRIKYFAQHHVDFLDKNVNAV 447 (582)
T ss_pred hhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCc--ccceeeecc--------cceecchhHhhhhHHHHHhHHH
Confidence 688999999999999999999999999999999996554 467665544 3568999997654444555442
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000517 955 VIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI-KDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDA 1033 (1449)
Q Consensus 955 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~ 1033 (1449)
.+-...+ +.. .++.+++-+..+||+.- +... +.+||||||-||++|.....+|.+|+|||||++||-
T Consensus 448 -d~~~~~~--pG~----~~ee~r~hl~~~Gl~g~la~~s-----i~~LSGGQKsrvafA~~~~~~PhlLVLDEPTNhLD~ 515 (582)
T KOG0062|consen 448 -DFMEKSF--PGK----TEEEIRRHLGSFGLSGELALQS-----IASLSGGQKSRVAFAACTWNNPHLLVLDEPTNHLDR 515 (582)
T ss_pred -HHHHHhC--CCC----CHHHHHHHHHhcCCCchhhhcc-----ccccCCcchhHHHHHHHhcCCCcEEEecCCCccccH
Confidence 2322222 221 23446778899999752 2211 457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000517 1034 RAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIY 1082 (1449)
Q Consensus 1034 ~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~ 1082 (1449)
.+-..+-++|++. +..||++||+-+. +-..|+++.+..+ |++.-
T Consensus 516 dsl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~-g~vt~ 559 (582)
T KOG0062|consen 516 DSLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVED-GKVTP 559 (582)
T ss_pred HHHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcC-CcEEe
Confidence 9999999999986 5579999999664 6678899999975 66543
No 190
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-35 Score=331.97 Aligned_cols=205 Identities=26% Similarity=0.368 Sum_probs=173.0
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC------CceEEEEcCCCccCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP------PKTSAYISQNDLHIA 258 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 258 (1449)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999997 9999999998754321 356999999999999
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
.+||+||+.+.....+.. . .+ ....++.+++.+||++..++.+.+
T Consensus 96 ~~t~~e~l~~~~~~~~~~-~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~- 140 (233)
T cd03258 96 SRTVFENVALPLEIAGVP-K---------AE------------------------IEERVLELLELVGLEDKADAYPAQ- 140 (233)
T ss_pred CCcHHHHHHHHHHHcCCC-H---------HH------------------------HHHHHHHHHHHCCChhhhhcChhh-
Confidence 999999998865432210 0 00 011246678999998877777765
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++++..++|+|++.| ..+++.+++|++++|+
T Consensus 141 ----LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH-~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 141 ----LSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITH-EMEVVKRICDRVAVME 215 (233)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHhCCEEEEEE
Confidence 99999999999999999999999999999999999999999999987654677776655 4567889999999999
Q ss_pred CCeEEEecChhhHH
Q 000517 419 EGKIVYHGPQDHVL 432 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1449)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999887763
No 191
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=3.6e-35 Score=333.57 Aligned_cols=207 Identities=22% Similarity=0.285 Sum_probs=168.7
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---cc-ccceEEEEccCCCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ET-FARVSGYCEQTDIHSPNI 949 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~-~~~~~gyv~Q~d~~~~~l 949 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+... .. .+..++|++|++.+++.+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLFLAFQYPEEIPGV 92 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceEeeeccccccCCc
Confidence 46999999999999999999999999999999999974111358999999987532 12 233489999999999999
Q ss_pred CHHHHHHHHHHhccCC----CCChHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 950 TVEESVIFSAWLRLAP----EINSKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 950 Tv~e~l~f~~~lr~~~----~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
|++|++.+........ ........+.++++++.++|. +..+..++ ..||||||||++||++|+.+|++|+|
T Consensus 93 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrl~la~al~~~p~llll 168 (243)
T TIGR01978 93 SNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EGFSGGEKKRNEILQMALLEPKLAIL 168 (243)
T ss_pred CHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cCcCHHHHHHHHHHHHHhcCCCEEEe
Confidence 9999998764322110 112233346688999999997 45555542 14999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHh-cCeEEEEecCcEEEEecCC
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEA-FDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~-~d~~~~l~~gG~~v~~G~~ 1086 (1449)
||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|. +|++++.|+.
T Consensus 169 DEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~-~G~i~~~g~~ 229 (243)
T TIGR01978 169 DEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLL-DGRIVKSGDV 229 (243)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEe-CCEEEEecCH
Confidence 9999999999999999999999877899999999986 45555 79999997 5899999875
No 192
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-35 Score=333.66 Aligned_cols=214 Identities=25% Similarity=0.324 Sum_probs=175.6
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 924 (1449)
.+.++|+++.+ +++.+|+|+|++|++||++||+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWY-------------GEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEe-------------CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 46777777643 2345999999999999999999999999999999999976531 2589999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc----ccccccccC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD----AIKDSLVGI 995 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 995 (1449)
.+... ..+++.+||++|++.+++ .|++||+.+....+ ....+..++.++++++.+++. +..++.+
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 152 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSPA-- 152 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCCh--
Confidence 87532 234567999999988877 89999999865432 122334455688899999984 3334443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ |+|||+++|++. ++.+.+|++++|.
T Consensus 153 ---~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 153 ---LSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 47999999999999999999999999999999999999999999999864 899999999986 4667899999997
Q ss_pred cCcEEEEecCC
Q 000517 1076 TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~gG~~v~~G~~ 1086 (1449)
+|++++.|++
T Consensus 228 -~G~i~~~~~~ 237 (258)
T PRK14268 228 -MGELIEFGQT 237 (258)
T ss_pred -CCEEEEeCCH
Confidence 5899999875
No 193
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-35 Score=340.74 Aligned_cols=202 Identities=25% Similarity=0.327 Sum_probs=171.4
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-------ccccceEEEEccCCC-C
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-------ETFARVSGYCEQTDI-H 945 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-------~~~~~~~gyv~Q~d~-~ 945 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++. .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKP--SSGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQ 97 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECccccccchHHHHHhceEEEEeChhhh
Confidence 4599999999999999999999999999999999998765 58999999987531 234567999999862 2
Q ss_pred CCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 946 SPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 946 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
+..+||.||+.|..... ....+...++++++++.+||. +..++.++ .||||||||++||++|+.+|++|+|
T Consensus 98 ~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~~-----~LSgGq~qrl~laral~~~p~lLlL 169 (287)
T PRK13641 98 LFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKSPF-----ELSGGQMRRVAIAGVMAYEPEILCL 169 (287)
T ss_pred hccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 33589999998765432 223445556789999999997 56677654 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
||||+|||+.++..+.+.|+++++.|.|||++||+++ ++.+.+|++++|+ +|++++.|+..
T Consensus 170 DEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~-~G~i~~~g~~~ 230 (287)
T PRK13641 170 DEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLE-HGKLIKHASPK 230 (287)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCHH
Confidence 9999999999999999999999777999999999986 5778899999997 58999999853
No 194
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=5.2e-35 Score=341.97 Aligned_cols=205 Identities=27% Similarity=0.376 Sum_probs=173.8
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC--CCceEEEEcCCCccCCCCCH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV--PPKTSAYISQNDLHIAEMTV 262 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 262 (1449)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 18 ~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 94 (303)
T TIGR01288 18 VVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFTV 94 (303)
T ss_pred EEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCcH
Confidence 5899999999999999999999999999999999999997 999999998864321 24679999999988999999
Q ss_pred HHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccccc
Q 000517 263 RETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRG 342 (1449)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 342 (1449)
+||+.+.....+... .+ ....++.+++.+||++..++.+++
T Consensus 95 ~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~ll~~~~l~~~~~~~~~~----- 135 (303)
T TIGR01288 95 RENLLVFGRYFGMST----------RE------------------------IEAVIPSLLEFARLESKADVRVAL----- 135 (303)
T ss_pred HHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHCCChhHhcCchhh-----
Confidence 999987554322100 00 001245678899999888888876
Q ss_pred CChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeE
Q 000517 343 ISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKI 422 (1449)
Q Consensus 343 lSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~i 422 (1449)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|++++. |..+++.++||+|++|++|++
T Consensus 136 LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~til~~s-H~~~~~~~~~d~i~~l~~G~i 213 (303)
T TIGR01288 136 LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLTT-HFMEEAERLCDRLCVLESGRK 213 (303)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEEC-CCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999875 466766654 556788899999999999999
Q ss_pred EEecChhhHHH
Q 000517 423 VYHGPQDHVLA 433 (1449)
Q Consensus 423 v~~G~~~~~~~ 433 (1449)
++.|+.+++.+
T Consensus 214 ~~~g~~~~~~~ 224 (303)
T TIGR01288 214 IAEGRPHALID 224 (303)
T ss_pred EEEcCHHHHHh
Confidence 99999988754
No 195
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-35 Score=332.98 Aligned_cols=201 Identities=25% Similarity=0.371 Sum_probs=171.3
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc---------cccccceEEEEccCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV---------QETFARVSGYCEQTDI 944 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~---------~~~~~~~~gyv~Q~d~ 944 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.. ....++.++|++|++.
T Consensus 15 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 15 HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMP--RSGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 4699999999999999999999999999999999998654 5899999998642 1234567999999999
Q ss_pred CCCCCCHHHHHHHHH-HhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000517 945 HSPNITVEESVIFSA-WLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIF 1023 (1449)
Q Consensus 945 ~~~~lTv~e~l~f~~-~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~ill 1023 (1449)
+++.+|+.||+.+.. ... ........+.+.++++.+||.+..++.++ .||||||||++|||+|+.+|++++
T Consensus 93 ~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrv~laral~~~p~lli 164 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFPL-----HLSGGQQQRVAIARALMMEPQVLL 164 (242)
T ss_pred ccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEE
Confidence 999999999997532 221 12233345678899999999887777653 799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1024 MDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1024 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|||||+|||+.++..+.+.|+++.++|+|+|+++|++. ++.+.+|++++|. +|++++.|+.
T Consensus 165 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 225 (242)
T PRK11124 165 FDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYME-NGHIVEQGDA 225 (242)
T ss_pred EcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEeCCH
Confidence 99999999999999999999999777999999999986 5667899999998 5899999875
No 196
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-35 Score=306.15 Aligned_cols=206 Identities=31% Similarity=0.479 Sum_probs=172.1
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCC---ceEEEEcCCCccCCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPP---KTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lT 261 (1449)
.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|++.+||++++.+.+. +..+..||+..+-...|
T Consensus 15 ~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFt 91 (259)
T COG4559 15 RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFT 91 (259)
T ss_pred eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceE
Confidence 4899999999999999999999999999999999999998 99999999999877552 56789999988878899
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+|-+.++..-.+.+.. |.. +...++.+|...++.+.+.... +
T Consensus 92 v~eVV~mGr~p~~~g~~-----------------~~e---------------~~~i~~~ala~~d~~~la~R~y-----~ 134 (259)
T COG4559 92 VQEVVQMGRIPHRSGRE-----------------PEE---------------DERIAAQALAATDLSGLAGRDY-----R 134 (259)
T ss_pred HHHHHHhcccccccCCC-----------------chh---------------hHHHHHHHHHHcChhhhhccch-----h
Confidence 99999998654332211 000 1123456677777777766554 3
Q ss_pred cCChhhhhhHHHHHHHhC------CCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEE
Q 000517 342 GISGGQKKRLTTGEMIVG------PTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDII 415 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~------~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~ 415 (1449)
.|||||||||.+||.|+. ++++||||||||+||......+++..|++++. + ..|+.++|+..-...++|+|+
T Consensus 135 ~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLAA~YaDriv 212 (259)
T COG4559 135 TLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLAAQYADRIV 212 (259)
T ss_pred hcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHHHHhhheee
Confidence 499999999999999974 44699999999999999999999999999985 3 455566788999999999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000517 416 LMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1449)
+|.+||++..|++++++
T Consensus 213 ll~~Grv~a~g~p~~vl 229 (259)
T COG4559 213 LLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeCCeEeecCCHHHhc
Confidence 99999999999998876
No 197
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-35 Score=324.50 Aligned_cols=222 Identities=26% Similarity=0.392 Sum_probs=193.7
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-------CceEEEEcCCCc
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-------PKTSAYISQNDL 255 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 255 (1449)
...-++|+|+.|+.||+..|||-||||||||+++|.++.+|+ +|+|.++|.++..... ++.+++|+|...
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa 116 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA 116 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc
Confidence 345789999999999999999999999999999999999998 9999999998866542 467999999999
Q ss_pred cCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccc
Q 000517 256 HIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMV 335 (1449)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 335 (1449)
++|+.||.||..|+.+.+|.+..+ | +.+..+.|+..||+..++.++
T Consensus 117 LlPhrtVl~Nv~fGLev~Gv~~~e-------r---------------------------~~~a~~~l~~VgL~~~~~~yp 162 (386)
T COG4175 117 LLPHRTVLENVAFGLEVQGVPKAE-------R---------------------------EERALEALELVGLEGYADKYP 162 (386)
T ss_pred cccchhHhhhhhcceeecCCCHHH-------H---------------------------HHHHHHHHHHcCchhhhhcCc
Confidence 999999999999999998865321 1 123466899999999999998
Q ss_pred cccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEE
Q 000517 336 GNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDII 415 (1449)
Q Consensus 336 g~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~ 415 (1449)
.+ ||||+||||.|||||+.+|+|||||||+|+|||--+.++.+-|.++.+..++|+|. ++|+.+|.+++.|||.
T Consensus 163 ~e-----LSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvF-itHDLdEAlriG~rIa 236 (386)
T COG4175 163 NE-----LSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVF-ITHDLDEALRIGDRIA 236 (386)
T ss_pred cc-----ccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEE-EecCHHHHHhccceEE
Confidence 76 99999999999999999999999999999999999999999998888877888776 5788999999999999
Q ss_pred EEeCCeEEEecChhhHHHHHHhcCCCCCCCCChhhHHHHh
Q 000517 416 LMAEGKIVYHGPQDHVLAFFEDCGFRCPERKGVSDFLQEV 455 (1449)
Q Consensus 416 lL~~G~iv~~G~~~~~~~~F~~~Gf~~p~~~~~adfl~ev 455 (1449)
+|.+|+|+..|+++|++. .|...-+++|..++
T Consensus 237 imkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 237 IMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 999999999999999974 34444455665543
No 198
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-35 Score=332.65 Aligned_cols=215 Identities=22% Similarity=0.282 Sum_probs=175.2
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 924 (1449)
.+.++|+++.++ +..+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 467777776542 245999999999999999999999999999999999976542 2479999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc----ccccccccC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD----AIKDSLVGI 995 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 995 (1449)
.++.. ...++.++|++|++.+++ +||+||+.+....+. .......++.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 234667999999988774 899999988654321 112233456788889998873 334444
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
.+.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++ +++|||+++|+++ ++.+.+|++++|.
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 34799999999999999999999999999999999999999999999996 4799999999986 4678899999997
Q ss_pred cCcEEEEecCC
Q 000517 1076 TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~gG~~v~~G~~ 1086 (1449)
+|+++..|+.
T Consensus 224 -~G~i~~~g~~ 233 (254)
T PRK14273 224 -NGCIEEESST 233 (254)
T ss_pred -CCEEEEeCCH
Confidence 5899999875
No 199
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.6e-35 Score=376.55 Aligned_cols=206 Identities=29% Similarity=0.437 Sum_probs=174.1
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1449)
++|+|+|++++||+.++|+||||||||||+++|+|.+ |. +|+|.+||+++++... ++.++||+|++.+|. .|
T Consensus 364 ~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~T 438 (588)
T PRK11174 364 TLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-GT 438 (588)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-cC
Confidence 5899999999999999999999999999999999999 86 8999999999887653 578999999887765 69
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
++|||.++. |+.+.+++.+++..++... .++ .|++..||.||+. ..
T Consensus 439 I~eNI~~g~-------------------------~~~~~eei~~al~~a~l~~------~i~--~lp~G~dT~vge~-G~ 484 (588)
T PRK11174 439 LRDNVLLGN-------------------------PDASDEQLQQALENAWVSE------FLP--LLPQGLDTPIGDQ-AA 484 (588)
T ss_pred HHHHhhcCC-------------------------CCCCHHHHHHHHHHhCHHH------HHH--hcccccccccccC-CC
Confidence 999998852 1223344555555444332 222 3788899999975 44
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
.||||||||++||||++++|+||+||||||+||+.++..|.+.|+++. .++|+|+..|++ +..+.+|+|++|++|+
T Consensus 485 ~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~TvIiItHrl--~~i~~aD~Iivl~~G~ 560 (588)
T PRK11174 485 GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTTLMVTHQL--EDLAQWDQIWVMQDGQ 560 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEEEEEecCh--HHHHhCCEEEEEeCCe
Confidence 599999999999999999999999999999999999999999999875 468888877776 5678899999999999
Q ss_pred EEEecChhhHHH
Q 000517 422 IVYHGPQDHVLA 433 (1449)
Q Consensus 422 iv~~G~~~~~~~ 433 (1449)
++..|+++++.+
T Consensus 561 i~e~G~~~eL~~ 572 (588)
T PRK11174 561 IVQQGDYAELSQ 572 (588)
T ss_pred EeecCCHHHHHh
Confidence 999999999864
No 200
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4.6e-35 Score=334.31 Aligned_cols=202 Identities=25% Similarity=0.322 Sum_probs=172.6
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc----------------ccccceEE
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ----------------ETFARVSG 937 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----------------~~~~~~~g 937 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 90 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPI--DEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIG 90 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccccccchhHHHHHhhCeE
Confidence 4699999999999999999999999999999999998654 58999999986531 13456799
Q ss_pred EEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh
Q 000517 938 YCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVA 1017 (1449)
Q Consensus 938 yv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~ 1017 (1449)
|++|++.+++..|+.||+.++.... .........+.++++++.+|+.+..+..+ ..||||||||++||++|+.
T Consensus 91 ~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~~ 163 (252)
T TIGR03005 91 MVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHMP-----AQLSGGQQQRVAIARALAM 163 (252)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcCh-----hhcCHHHHHHHHHHHHHHc
Confidence 9999999999999999998754221 11233444567889999999987777654 4799999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1018 NPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1018 ~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||++. ++...+|++++|. +|++++.|+.
T Consensus 164 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 231 (252)
T TIGR03005 164 RPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVCFFD-KGRIVEQGKP 231 (252)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEeCCH
Confidence 99999999999999999999999999998764 899999999986 5677899999997 5899998875
No 201
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-35 Score=336.56 Aligned_cols=207 Identities=25% Similarity=0.371 Sum_probs=174.7
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-------CceEEEEcCCCc
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-------PKTSAYISQNDL 255 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 255 (1449)
...+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.
T Consensus 36 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 36 QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 356999999999999999999999999999999999999987 9999999988754321 346999999999
Q ss_pred cCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccc
Q 000517 256 HIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMV 335 (1449)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 335 (1449)
+++.+||+||+.+.....+... .+ ....++++++.+||.+..++.+
T Consensus 113 ~~~~~tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~ 158 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQGVPR----------AE------------------------REERAAEALELVGLEGWEHKYP 158 (269)
T ss_pred cCCCCcHHHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCCHhHhhCCc
Confidence 9999999999998754322100 00 0112456789999988888887
Q ss_pred cccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEE
Q 000517 336 GNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDII 415 (1449)
Q Consensus 336 g~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~ 415 (1449)
++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..++|+|++. |..+++.+++|+++
T Consensus 159 ~~-----LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~t-H~~~~~~~~~d~v~ 232 (269)
T cd03294 159 DE-----LSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFIT-HDLDEALRLGDRIA 232 (269)
T ss_pred cc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhcCEEE
Confidence 75 9999999999999999999999999999999999999999999998765567777665 55667889999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000517 416 LMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1449)
+|++|++++.|+.+++.
T Consensus 233 ~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 233 IMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988764
No 202
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-35 Score=333.84 Aligned_cols=204 Identities=29% Similarity=0.325 Sum_probs=170.3
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCccCcc---ccccceEEEEccCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSP 947 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~ 947 (1449)
..+|+|+|++|++||+++|+||||||||||+++|+|...+. +.+|+|.++|.++.. ..+++.+||++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 45999999999999999999999999999999999976531 358999999987532 245667999999998888
Q ss_pred CCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000517 948 NITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIF 1023 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~ill 1023 (1449)
.+||.||+.+....+.. .....+..+.++++++.++|.+ ..++.+ ..||||||||++|||||+.+|++|+
T Consensus 96 ~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~LSgG~~qrv~laral~~~p~lll 169 (250)
T PRK14247 96 NLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAPA-----GKLSGGQQQRLCIARALAFQPEVLL 169 (250)
T ss_pred CCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999999886543211 1122344567889999999854 234443 4799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1024 MDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1024 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|||||+|||+.++..+.+.|+++++ |+|||+++|+++ ++.+.+|++++|. +|+++..|+.
T Consensus 170 LDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 229 (250)
T PRK14247 170 ADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLY-KGQIVEWGPT 229 (250)
T ss_pred EcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEE-CCeEEEECCH
Confidence 9999999999999999999999864 899999999986 4677899999997 5899999875
No 203
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.5e-35 Score=348.92 Aligned_cols=206 Identities=31% Similarity=0.509 Sum_probs=170.3
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1449)
++++|+|++++||+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+..+..+ +++++||+|++.+++ -|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-cc
Confidence 6899999999999999999999999999999999999997 9999999999887653 688999999887665 69
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
+|||+.++.. +.+.++..++++..+ +.+.+.-++..||.+|+. .+
T Consensus 411 ireNi~l~~~-------------------------~~s~e~i~~al~~a~---------l~~~v~~p~GLdt~ige~-G~ 455 (559)
T COG4988 411 IRENILLARP-------------------------DASDEEIIAALDQAG---------LLEFVPKPDGLDTVIGEG-GA 455 (559)
T ss_pred HHHHhhccCC-------------------------cCCHHHHHHHHHHhc---------HHHhhcCCCcccchhccC-CC
Confidence 9999998531 111111222222111 122222356789999974 67
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
||||||+|||++|||++.+++++++||||++||.++...|.+.|.++++ ++|+++..|++ +...-+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~itHrl--~~~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLVITHRL--EDAADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEEEEcCh--HHHhcCCEEEEecCCc
Confidence 8999999999999999999999999999999999999999999999985 47888776653 5667899999999999
Q ss_pred EEEecChhhHHH
Q 000517 422 IVYHGPQDHVLA 433 (1449)
Q Consensus 422 iv~~G~~~~~~~ 433 (1449)
++.+|.++++.+
T Consensus 532 l~~~g~~~~L~~ 543 (559)
T COG4988 532 LVEQGTHEELSE 543 (559)
T ss_pred eeccCCHHHHhh
Confidence 999999999854
No 204
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.8e-34 Score=339.18 Aligned_cols=214 Identities=28% Similarity=0.495 Sum_probs=180.2
Q ss_pred CCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcC
Q 000517 845 EPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISG 924 (1449)
Q Consensus 845 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G 924 (1449)
.++.+..+|++|.++. + +++++|+|++++||+.+||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~~-----------g-~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYPD-----------G-KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecCC-----------C-CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 4566667788876542 2 2799999999999999999999999999999999998765 589999999
Q ss_pred ccC---ccccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc------ccccccC
Q 000517 925 YPK---VQETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI------KDSLVGI 995 (1449)
Q Consensus 925 ~~~---~~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~------~~~~vg~ 995 (1449)
.+. +...++++++||+|++.+++ -|++||+.++. ++ ..++.+.++++..+|.+. .|+.+|+
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~----~s~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PD----ASDEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----Cc----CCHHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 875 34678899999999998876 59999998742 12 223557778888887654 3566776
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
.| ++|||||+|||++||||+.+++++++||||++||.++.+.|++.|.++++ ++||+++||++. ....+|+|++|+
T Consensus 453 ~G-~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 GG-AGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred CC-CCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 54 57999999999999999999999999999999999999999999999976 599999999974 567889999997
Q ss_pred cCcEEEEecCCC
Q 000517 1076 TGGRIIYCGPLG 1087 (1449)
Q Consensus 1076 ~gG~~v~~G~~~ 1087 (1449)
+|+++..|...
T Consensus 529 -~G~l~~~g~~~ 539 (559)
T COG4988 529 -NGRLVEQGTHE 539 (559)
T ss_pred -CCceeccCCHH
Confidence 59999999864
No 205
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-35 Score=338.06 Aligned_cols=206 Identities=22% Similarity=0.337 Sum_probs=170.6
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCC-------CCCceEEEEcCCCc-
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEF-------VPPKTSAYISQNDL- 255 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~- 255 (1449)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 35999999999999999999999999999999999999997 99999999987531 11357999999852
Q ss_pred cCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC-cccccc
Q 000517 256 HIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD-VCADTM 334 (1449)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 334 (1449)
.+...||+||+.|+....+.. ..+ ....++.+++.+||+ ...++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVS----------EED------------------------AKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCC----------HHH------------------------HHHHHHHHHHHCCCChhhhhCC
Confidence 344579999999875432211 000 011356789999997 556777
Q ss_pred ccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeE
Q 000517 335 VGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDI 414 (1449)
Q Consensus 335 vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v 414 (1449)
+.+ |||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|+++++..+.|+|++ +|..+++.+++|+|
T Consensus 143 ~~~-----LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviii-tHd~~~~~~~~drv 216 (290)
T PRK13634 143 PFE-----LSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLV-THSMEDAARYADQI 216 (290)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHhCCEE
Confidence 765 999999999999999999999999999999999999999999999976556676665 45567888999999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000517 415 ILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~ 432 (1449)
++|++|++++.|+++++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIF 234 (290)
T ss_pred EEEECCEEEEECCHHHHh
Confidence 999999999999988764
No 206
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-35 Score=349.97 Aligned_cols=204 Identities=23% Similarity=0.321 Sum_probs=175.9
Q ss_pred ccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---cc----ccceEEEEccCCC
Q 000517 872 RKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ET----FARVSGYCEQTDI 944 (1449)
Q Consensus 872 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~----~~~~~gyv~Q~d~ 944 (1449)
+...+|+|+||+|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.. .. .++.+||++|+..
T Consensus 39 ~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p--~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 39 GLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP--TRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCC--CCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 344589999999999999999999999999999999998765 58999999987532 11 2357999999999
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 945 HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 945 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
+++++||+||+.+....+. ...+...+.++++++.+||.+..++.+. .||||||||++|||||+.+|++|||
T Consensus 117 l~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~~-----~LSgGq~QRv~LArAL~~~P~iLLL 188 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYPD-----ELSGGMRQRVGLARALAINPDILLM 188 (400)
T ss_pred CCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCcc-----cCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999998765432 2334455678899999999988887754 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
||||+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|. +|+++..|+..
T Consensus 189 DEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~-~G~i~~~g~~~ 250 (400)
T PRK10070 189 DEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQ-NGEVVQVGTPD 250 (400)
T ss_pred ECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEE-CCEEEecCCHH
Confidence 999999999999999999999875 4899999999986 5778899999998 58999998764
No 207
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=332.39 Aligned_cols=213 Identities=20% Similarity=0.330 Sum_probs=176.6
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRA--TSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEec
Confidence 366777776542 34699999999999999999999999999999999998654 589999999875
Q ss_pred ccc----cccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHc-CCcccccccccCCCCCCCC
Q 000517 928 VQE----TFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETI-ELDAIKDSLVGIPGVNGLS 1002 (1449)
Q Consensus 928 ~~~----~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LS 1002 (1449)
... ..++.++|++|+..+++.+||.||+.+..... ......+.++++++.+ ++.+..+..+ ..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~~-----~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQRA-----GTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCch-----hhCC
Confidence 321 24567999999999899999999998754221 1122334567778877 4766555543 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000517 1003 TEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIY 1082 (1449)
Q Consensus 1003 gGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~ 1082 (1449)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|. +|++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLE-NGHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEe-CCEEEe
Confidence 99999999999999999999999999999999999999999999877999999999986 5788999999998 589999
Q ss_pred ecCCC
Q 000517 1083 CGPLG 1087 (1449)
Q Consensus 1083 ~G~~~ 1087 (1449)
.|+..
T Consensus 218 ~~~~~ 222 (237)
T PRK11614 218 EDTGD 222 (237)
T ss_pred eCCHH
Confidence 99864
No 208
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-35 Score=300.72 Aligned_cols=200 Identities=28% Similarity=0.419 Sum_probs=177.1
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCHHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEE 953 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~e 953 (1449)
+.+|+|+|++|.+||.++++||||||||||||+++|..+| ..|+|.+||.++....- .-|.|+|++.++|.+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P--~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTP--SRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCc--ccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 4599999999999999999999999999999999998876 58999999998654322 2389999999999999999
Q ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000517 954 SVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDA 1033 (1449)
Q Consensus 954 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~ 1033 (1449)
|+.|+..++. +.+.++.+.+.+++..+||.+..+..+ -+||||||||+.|||||+.+|++|+||||.+.||+
T Consensus 94 NvafgL~l~G---i~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLRG---IEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhcC---CCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 9999988874 567888899999999999998887765 37999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-hcCCEEEEEecCccHHHHHhcCeEEEEecC-cEEEEecCC
Q 000517 1034 RAAAIVMRAVKNIV-NTGRTIVCTIHQPSIDIFEAFDELILLKTG-GRIIYCGPL 1086 (1449)
Q Consensus 1034 ~~~~~i~~~l~~l~-~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g-G~~v~~G~~ 1086 (1449)
-+++.++++|-++. ++|+.++++||+.+ +..-.++++++|+.+ ||++..-|+
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~ 219 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPL 219 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCC
Confidence 99999999998886 46999999999976 455578999999743 788887766
No 209
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-35 Score=337.58 Aligned_cols=222 Identities=23% Similarity=0.362 Sum_probs=178.4
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC-------CCceEEEEcCCC-cc
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV-------PPKTSAYISQND-LH 256 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d-~~ 256 (1449)
.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.++.... .++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999998 999999999875211 245799999985 24
Q ss_pred CCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC-ccccccc
Q 000517 257 IAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD-VCADTMV 335 (1449)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~v 335 (1449)
+...||.||+.|+....+.. +.+ .+..+.++++.+||. ...++.+
T Consensus 97 l~~~tv~~~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~L~~~~~~~~~ 142 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIP----------KEK------------------------AEKIAAEKLEMVGLADEFWEKSP 142 (288)
T ss_pred cccchHHHHHHhHHHHcCCC----------HHH------------------------HHHHHHHHHHHcCCChhhccCCc
Confidence 44579999999976543211 000 011346678899996 4566666
Q ss_pred cccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEE
Q 000517 336 GNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDII 415 (1449)
Q Consensus 336 g~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~ 415 (1449)
.+ ||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .+.|+|++. |..+++.++||+|+
T Consensus 143 ~~-----LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~g~til~vt-Hd~~~~~~~~dri~ 215 (288)
T PRK13643 143 FE-----LSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-SGQTVVLVT-HLMDDVADYADYVY 215 (288)
T ss_pred cc-----CCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEe-cCHHHHHHhCCEEE
Confidence 54 999999999999999999999999999999999999999999999875 467776655 55678889999999
Q ss_pred EEeCCeEEEecChhhHH---HHHHhcCCCCCCCCChhh
Q 000517 416 LMAEGKIVYHGPQDHVL---AFFEDCGFRCPERKGVSD 450 (1449)
Q Consensus 416 lL~~G~iv~~G~~~~~~---~~F~~~Gf~~p~~~~~ad 450 (1449)
+|++|+++++|+++++. ++++..|+.+|.....++
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~ 253 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFAD 253 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHH
Confidence 99999999999999874 345566777665444433
No 210
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=5.8e-35 Score=329.48 Aligned_cols=204 Identities=24% Similarity=0.397 Sum_probs=171.7
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 260 (1449)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (232)
T cd03218 14 KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKL 90 (232)
T ss_pred EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCccccccC
Confidence 5899999999999999999999999999999999999997 9999999988754321 24689999999999999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||+||+.+.....+.. +.+ ....++.+++.+||++..++.+++
T Consensus 91 tv~~~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~--- 133 (232)
T cd03218 91 TVEENILAVLEIRGLS----------KKE------------------------REEKLEELLEEFHITHLRKSKASS--- 133 (232)
T ss_pred cHHHHHHHHHHhcCCC----------HHH------------------------HHHHHHHHHHHcCChhhhhCChhh---
Confidence 9999998864322110 000 011346688999998888887765
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.+ .+.|+|++. |..+++.+++|++++|++|
T Consensus 134 --LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~tii~~s-H~~~~~~~~~d~i~~l~~G 209 (232)
T cd03218 134 --LSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-RGIGVLITD-HNVRETLSITDRAYIIYEG 209 (232)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999875 466766655 5566889999999999999
Q ss_pred eEEEecChhhHH
Q 000517 421 KIVYHGPQDHVL 432 (1449)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1449)
++++.|+.+++.
T Consensus 210 ~i~~~~~~~~~~ 221 (232)
T cd03218 210 KVLAEGTPEEIA 221 (232)
T ss_pred eEEEEeCHHHhh
Confidence 999999987653
No 211
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-35 Score=338.41 Aligned_cols=217 Identities=27% Similarity=0.411 Sum_probs=176.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC-----CCceEEEEcCCCc-cC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV-----PPKTSAYISQNDL-HI 257 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 257 (1449)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 35999999999999999999999999999999999999998 999999999876532 2467999999863 44
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC--ccccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD--VCADTMV 335 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~--~~~dt~v 335 (1449)
...||+||+.|+....+.. +.+ ....++++++.+||+ +..|+.+
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~ 142 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------EEE------------------------IENRVKRAMNIVGLDYEDYKDKSP 142 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------HHH------------------------HHHHHHHHHHHcCCCchhhccCCc
Confidence 5689999999865432211 000 011356789999997 5667776
Q ss_pred cccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEE
Q 000517 336 GNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDII 415 (1449)
Q Consensus 336 g~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~ 415 (1449)
.. ||||||||++||+||+.+|++|+|||||+|||+.++.++.+.|+++++..+.|+|++ +|...++.++||+|+
T Consensus 143 ~~-----LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~v-tHd~~~~~~~~drv~ 216 (287)
T PRK13637 143 FE-----LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILV-SHSMEDVAKLADRII 216 (287)
T ss_pred cc-----CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHhCCEEE
Confidence 55 999999999999999999999999999999999999999999999976546676665 455678889999999
Q ss_pred EEeCCeEEEecChhhHHH---HHHhcCCCCC
Q 000517 416 LMAEGKIVYHGPQDHVLA---FFEDCGFRCP 443 (1449)
Q Consensus 416 lL~~G~iv~~G~~~~~~~---~F~~~Gf~~p 443 (1449)
+|++|++++.|+++++.+ .+...|+.+|
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~ 247 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVP 247 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCC
Confidence 999999999999988743 2334455544
No 212
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-35 Score=327.04 Aligned_cols=200 Identities=27% Similarity=0.424 Sum_probs=169.0
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCCCHH
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTVR 263 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 263 (1449)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999987 9999999988753 246799999999888999999
Q ss_pred HHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccC
Q 000517 264 ETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGI 343 (1449)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGl 343 (1449)
||+.++....+... .+ ....++.+++.+||++..++.+++ |
T Consensus 92 e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------AE------------------------ARERAEELLELVGLSGFENAYPHQ-----L 132 (220)
T ss_pred HHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCChhhhhCCccc-----C
Confidence 99998754322100 00 011246688999998877877765 9
Q ss_pred ChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe--CCe
Q 000517 344 SGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA--EGK 421 (1449)
Q Consensus 344 SGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~--~G~ 421 (1449)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+..++|+|++.| ..+++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH-~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTH-DIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEec-CHHHHHHhCCEEEEEECCCCE
Confidence 9999999999999999999999999999999999999999999986555677776655 4567889999999999 799
Q ss_pred EEEecCh
Q 000517 422 IVYHGPQ 428 (1449)
Q Consensus 422 iv~~G~~ 428 (1449)
++..++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9988765
No 213
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=336.36 Aligned_cols=220 Identities=25% Similarity=0.349 Sum_probs=179.7
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC-eeEEEEEEcCccC
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG-YVEGEIKISGYPK 927 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~G~~~ 927 (1449)
+.++|+++++ +++.+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+.
T Consensus 5 l~~~nl~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~ 71 (262)
T PRK09984 5 IRVEKLAKTF-------------NQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTV 71 (262)
T ss_pred EEEeeEEEEe-------------CCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEec
Confidence 5666766543 2346999999999999999999999999999999999986553 1369999999865
Q ss_pred cc--------ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccC-----CCCChHHHHHHHHHHHHHcCCccccccccc
Q 000517 928 VQ--------ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLA-----PEINSKTKAEFVNEVLETIELDAIKDSLVG 994 (1449)
Q Consensus 928 ~~--------~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg 994 (1449)
.. ...++.++|++|++.+++.+||.||+.+......+ .....+..++.++++++.+||.+..++.++
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 151 (262)
T PRK09984 72 QREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVS 151 (262)
T ss_pred ccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCcc
Confidence 32 12356789999999999999999999875321000 011123345678999999999887777654
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEE
Q 000517 995 IPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELIL 1073 (1449)
Q Consensus 995 ~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~ 1073 (1449)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||++||+++ .+...+|++++
T Consensus 152 -----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~~ 225 (262)
T PRK09984 152 -----TLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIVA 225 (262)
T ss_pred -----ccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEE
Confidence 7999999999999999999999999999999999999999999999975 4899999999986 46788999999
Q ss_pred EecCcEEEEecCCCC
Q 000517 1074 LKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1074 l~~gG~~v~~G~~~~ 1088 (1449)
|. +|++++.|+..+
T Consensus 226 l~-~g~i~~~g~~~~ 239 (262)
T PRK09984 226 LR-QGHVFYDGSSQQ 239 (262)
T ss_pred EE-CCEEEEeCCHHH
Confidence 97 589999998753
No 214
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=6.5e-35 Score=346.06 Aligned_cols=208 Identities=25% Similarity=0.345 Sum_probs=176.8
Q ss_pred cccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCc----cCCCCCC-------CceEEEE
Q 000517 182 AKINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGY----KLEEFVP-------PKTSAYI 250 (1449)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~----~~~~~~~-------~~~~~yv 250 (1449)
....+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|. ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 3467999999999999999999999999999999999999998 999999996 3332211 2479999
Q ss_pred cCCCccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcc
Q 000517 251 SQNDLHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVC 330 (1449)
Q Consensus 251 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~ 330 (1449)
+|++.+++.+||+||+.|+....+... .+ ....++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------~~------------------------~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------AE------------------------RRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCCchh
Confidence 999999999999999999865433211 00 01234668999999988
Q ss_pred ccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhh
Q 000517 331 ADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDL 410 (1449)
Q Consensus 331 ~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~ 410 (1449)
.|+.+++ |||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++|+|++ +|..+++.++
T Consensus 158 ~~~~~~~-----LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~i-THdl~e~~~l 231 (382)
T TIGR03415 158 ADKKPGE-----LSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFV-SHDLDEALKI 231 (382)
T ss_pred hcCChhh-----CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEE-eCCHHHHHHh
Confidence 8888876 999999999999999999999999999999999999999999999876556777765 4567788999
Q ss_pred cCeEEEEeCCeEEEecChhhHH
Q 000517 411 FDDIILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 411 fD~v~lL~~G~iv~~G~~~~~~ 432 (1449)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999998875
No 215
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-35 Score=335.85 Aligned_cols=201 Identities=25% Similarity=0.389 Sum_probs=172.0
Q ss_pred eeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCC-CCCCCC
Q 000517 875 RLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDI-HSPNIT 950 (1449)
Q Consensus 875 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~-~~~~lT 950 (1449)
.+|+|+||++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+... ..+++.+||++|++. .+...|
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~t 95 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKP--TSGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSPT 95 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECCcCCHHHHHhheEEEecCccccccccc
Confidence 599999999999999999999999999999999998664 58999999987532 245567899999963 344689
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000517 951 VEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTG 1030 (1449)
Q Consensus 951 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsg 1030 (1449)
|.||+.+..... ....+...+.++++++.++|.+..++.++ .||||||||++|||||+.+|++|+|||||+|
T Consensus 96 v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Gq~qrl~laraL~~~p~llilDEPt~g 167 (277)
T PRK13652 96 VEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVPH-----HLSGGEKKRVAIAGVIAMEPQVLVLDEPTAG 167 (277)
T ss_pred HHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 999998765432 23344455678999999999887777754 7999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1031 LDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1031 LD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|+ +|++++.|+.+
T Consensus 168 LD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~-~G~i~~~g~~~ 223 (277)
T PRK13652 168 LDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMD-KGRIVAYGTVE 223 (277)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEE-CCeEEEECCHH
Confidence 9999999999999999765 899999999986 5778999999998 58999999863
No 216
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-35 Score=334.64 Aligned_cols=202 Identities=28% Similarity=0.431 Sum_probs=171.5
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCCCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSPNIT 950 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~lT 950 (1449)
+.+|+|+|+++++|++++|+|+||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 92 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSP--DSGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFT 92 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCC
Confidence 4699999999999999999999999999999999998654 58999999986532 234567999999988878899
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHh------hCCCEEEE
Q 000517 951 VEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELV------ANPSIIFM 1024 (1449)
Q Consensus 951 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~------~~p~illL 1024 (1449)
|+||+.+..... ....+..++.++++++.++|.+..++.++ .||||||||++||++|+ .+|++|+|
T Consensus 93 v~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGe~qrv~la~al~~~~~~~~~p~lllL 164 (258)
T PRK13548 93 VEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDYP-----QLSGGEQQRVQLARVLAQLWEPDGPPRWLLL 164 (258)
T ss_pred HHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCcc-----cCCHHHHHHHHHHHHHhcccccCCCCCEEEE
Confidence 999998754221 11123334568899999999887777654 79999999999999999 59999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIV-NTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~-~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
||||+|||+.++..+.+.|++++ +.|+|||++||++. ++...+|++++|. +|++++.|+..
T Consensus 165 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~~ 226 (258)
T PRK13548 165 DEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLH-QGRLVADGTPA 226 (258)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEE-CCEEEeeCCHH
Confidence 99999999999999999999997 56899999999986 5677899999998 58999988863
No 217
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.2e-35 Score=331.34 Aligned_cols=204 Identities=27% Similarity=0.367 Sum_probs=171.3
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccc----cccceEEEEccCCCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQE----TFARVSGYCEQTDIHSPNI 949 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~----~~~~~~gyv~Q~d~~~~~l 949 (1449)
+.+|+|+||+|++||+++|+|+|||||||||++|+|...+ .+|+|.++|.+.... ..++.++|++|++.+++.+
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRP--DEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENL 92 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCC
Confidence 4699999999999999999999999999999999998654 589999999865321 1245699999999999999
Q ss_pred CHHHHHHHHHHhccC--C---CCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 950 TVEESVIFSAWLRLA--P---EINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 950 Tv~e~l~f~~~lr~~--~---~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
||+||+.+....... . ....+..++.++++++.+|+.+..++.++ .||||||||++|||+|+.+|++|+|
T Consensus 93 tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Ge~qrv~laral~~~p~~lll 167 (242)
T TIGR03411 93 TVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAG-----LLSHGQKQWLEIGMLLMQDPKLLLL 167 (242)
T ss_pred CHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 999999885432100 0 01123345678999999999887777654 7999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.+|++++|. +|+++..|+..
T Consensus 168 DEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~-~g~~~~~~~~~ 227 (242)
T TIGR03411 168 DEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLH-QGSVLAEGSLD 227 (242)
T ss_pred cCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEE-CCeEEeeCCHH
Confidence 999999999999999999999875 799999999986 5777899999997 58999998753
No 218
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-35 Score=337.52 Aligned_cols=201 Identities=23% Similarity=0.323 Sum_probs=171.9
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc----ccccceEEEEccCCC-CCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ----ETFARVSGYCEQTDI-HSPN 948 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d~-~~~~ 948 (1449)
+.+|+||||+|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++. .++.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRP--QKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 4599999999999999999999999999999999998654 58999999987532 234567999999975 3567
Q ss_pred CCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000517 949 ITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1028 (1449)
Q Consensus 949 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPT 1028 (1449)
.|+.||+.+..... ..+....++.++++++.+||.+..++.++ .||||||||++||+||+.+|+||+|||||
T Consensus 93 ~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrv~laral~~~p~lllLDEPt 164 (274)
T PRK13644 93 RTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSPK-----TLSGGQGQCVALAGILTMEPECLIFDEVT 164 (274)
T ss_pred chHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 89999998865332 12344455678899999999888777654 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1029 TGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1029 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
+|||+.++..+++.|++++++|+|||++||+++ ++ ..+|++++|. +|++++.|+.+
T Consensus 165 ~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~-~G~i~~~g~~~ 220 (274)
T PRK13644 165 SMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMD-RGKIVLEGEPE 220 (274)
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEE-CCEEEEECCHH
Confidence 999999999999999999877999999999986 45 6799999997 58999999863
No 219
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-35 Score=333.32 Aligned_cols=216 Identities=27% Similarity=0.322 Sum_probs=176.7
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISGY 925 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G~ 925 (1449)
++++|++++++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 5 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~ 71 (253)
T PRK14267 5 IETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGR 71 (253)
T ss_pred EEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCE
Confidence 56777776542 245999999999999999999999999999999999986542 24899999998
Q ss_pred cCc-----cccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000517 926 PKV-----QETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGIP 996 (1449)
Q Consensus 926 ~~~-----~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~ 996 (1449)
++. ...+++.++|++|++.+++.+||.||+.+....+.. ....+...+.++++++.++|.+ ..+..
T Consensus 72 ~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 146 (253)
T PRK14267 72 NIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLNDY---- 146 (253)
T ss_pred EccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhccC----
Confidence 753 123456799999999999999999999886543211 0122334456788999999853 23333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 997 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 997 ~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++...+|++++|.
T Consensus 147 -~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~- 222 (253)
T PRK14267 147 -PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLY- 222 (253)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEE-
Confidence 347999999999999999999999999999999999999999999999865 799999999986 5678899999997
Q ss_pred CcEEEEecCC
Q 000517 1077 GGRIIYCGPL 1086 (1449)
Q Consensus 1077 gG~~v~~G~~ 1086 (1449)
+|++++.|+.
T Consensus 223 ~G~i~~~~~~ 232 (253)
T PRK14267 223 LGKLIEVGPT 232 (253)
T ss_pred CCEEEEeCCH
Confidence 5899999886
No 220
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=7e-35 Score=329.67 Aligned_cols=214 Identities=25% Similarity=0.392 Sum_probs=173.3
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 260 (1449)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~ 90 (236)
T cd03219 14 VALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPEL 90 (236)
T ss_pred EEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccCC
Confidence 5899999999999999999999999999999999999987 9999999998765432 24589999999999999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||+||+.++....+... .... . ...+.+ +....++++++.+||++..++.+++
T Consensus 91 tv~~~l~~~~~~~~~~~-------~~~~-~-----~~~~~~-----------~~~~~~~~~l~~~~l~~~~~~~~~~--- 143 (236)
T cd03219 91 TVLENVMVAAQARTGSG-------LLLA-R-----ARREER-----------EARERAEELLERVGLADLADRPAGE--- 143 (236)
T ss_pred CHHHHHHHHHhhccccc-------cccc-c-----ccccHH-----------HHHHHHHHHHHHcCccchhhCChhh---
Confidence 99999998754321100 0000 0 000000 0112356788999998877877765
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++. |..+++.+++|++++|++|
T Consensus 144 --LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~vs-H~~~~~~~~~d~i~~l~~G 219 (236)
T cd03219 144 --LSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RGITVLLVE-HDMDVVMSLADRVTVLDQG 219 (236)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEe-cCHHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999876 567776655 5566888999999999999
Q ss_pred eEEEecChhhHH
Q 000517 421 KIVYHGPQDHVL 432 (1449)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1449)
++++.|+++++.
T Consensus 220 ~i~~~~~~~~~~ 231 (236)
T cd03219 220 RVIAEGTPDEVR 231 (236)
T ss_pred EEEeecCHHHhc
Confidence 999999988763
No 221
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-35 Score=336.62 Aligned_cols=215 Identities=25% Similarity=0.335 Sum_probs=179.6
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|+++.+.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 6 l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i~ 72 (279)
T PRK13635 6 IRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVLS 72 (279)
T ss_pred EEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECC
Confidence 567777665421 124599999999999999999999999999999999998765 5899999998754
Q ss_pred c---ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000517 929 Q---ETFARVSGYCEQTDI-HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 929 ~---~~~~~~~gyv~Q~d~-~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1004 (1449)
. ...++.+||++|++. .++..||.||+.+..... ....++..+.++++++.+||.+..++.++ .||||
T Consensus 73 ~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LS~G 144 (279)
T PRK13635 73 EETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREPH-----RLSGG 144 (279)
T ss_pred cCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCcc-----cCCHH
Confidence 2 234567999999973 567789999998865432 12334455678999999999988887754 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYC 1083 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~ 1083 (1449)
||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++ ..+|++++|. +|++++.
T Consensus 145 ~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~-~G~i~~~ 221 (279)
T PRK13635 145 QKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMN-KGEILEE 221 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEE-CCEEEEE
Confidence 999999999999999999999999999999999999999999876 899999999986 34 4699999997 5899999
Q ss_pred cCCC
Q 000517 1084 GPLG 1087 (1449)
Q Consensus 1084 G~~~ 1087 (1449)
|+.+
T Consensus 222 g~~~ 225 (279)
T PRK13635 222 GTPE 225 (279)
T ss_pred CCHH
Confidence 9863
No 222
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=8.1e-35 Score=339.80 Aligned_cols=205 Identities=28% Similarity=0.431 Sum_probs=176.0
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC--CCceEEEEcCCCccCCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV--PPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1449)
..+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 35899999999999999999999999999999999999998 999999998875421 2457999999999999999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+||+.+.+++.+.... + ....++.+++.+||++..|+.+++
T Consensus 92 v~e~l~~~~~~~~~~~~----------~------------------------~~~~~~~~l~~~gl~~~~~~~~~~---- 133 (301)
T TIGR03522 92 VREYLQFIAGIYGMKGQ----------L------------------------LKQRVEEMIELVGLRPEQHKKIGQ---- 133 (301)
T ss_pred HHHHHHHHHHHcCCCHH----------H------------------------HHHHHHHHHHHCCCchHhcCchhh----
Confidence 99999987665432100 0 011246789999999988888876
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
|||||||||+||+||+++|++|+|||||+|||+.++..+++.|+++.+ ++|++++ +|..+++.++||+|++|++|+
T Consensus 134 -LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~--~~tiii~-sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 134 -LSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK--DKTIILS-THIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC--CCEEEEE-cCCHHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999853 5666665 556778999999999999999
Q ss_pred EEEecChhhHHH
Q 000517 422 IVYHGPQDHVLA 433 (1449)
Q Consensus 422 iv~~G~~~~~~~ 433 (1449)
+++.|+.+++.+
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998865
No 223
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-34 Score=319.40 Aligned_cols=196 Identities=30% Similarity=0.584 Sum_probs=163.2
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC-eeEEEEEEcCcc
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG-YVEGEIKISGYP 926 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~G~~ 926 (1449)
+++|+|++|.++.+ .+++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57899999987643 13457999999999999999999999999999999999986522 468999999987
Q ss_pred Ccc--ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000517 927 KVQ--ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 927 ~~~--~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1004 (1449)
... ...++.++|++|++.+++.+||+||+.+....+ .+.. +..||||
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 542 245667999999999999999999998753211 2222 2479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYC 1083 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~ 1083 (1449)
||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ +.|+|+++|+...++.+.+|++++|. +|++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~-~G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLY-EGRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEE-CCEEEec
Confidence 999999999999999999999999999999999999999999765 67877776664446778999999998 5899876
Q ss_pred c
Q 000517 1084 G 1084 (1449)
Q Consensus 1084 G 1084 (1449)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 5
No 224
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.1e-35 Score=324.94 Aligned_cols=194 Identities=27% Similarity=0.402 Sum_probs=164.6
Q ss_pred cceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-ccccceEEEEccCCCCCCCCCHHHHHHH
Q 000517 879 DVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-ETFARVSGYCEQTDIHSPNITVEESVIF 957 (1449)
Q Consensus 879 ~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~e~l~f 957 (1449)
|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~--~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETP--QSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 99999999999999999999999999999998654 58999999987532 1234679999999999999999999987
Q ss_pred HHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000517 958 SAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAA 1037 (1449)
Q Consensus 958 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~ 1037 (1449)
....+. .. .+..++.++++++.++|.+..++.+. .||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRLPG-----ELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 533211 11 12345568899999999887777653 79999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1038 IVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1038 ~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
.+++.|+++++ .|+|||++||+++ ++.+.+|++++|. +|+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLD-NGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEE-CCEEeecC
Confidence 99999999975 4899999999986 4667899999998 58987654
No 225
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.3e-35 Score=294.08 Aligned_cols=199 Identities=28% Similarity=0.422 Sum_probs=171.9
Q ss_pred cccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---c---c-ccceEEEEccCC
Q 000517 871 DRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---E---T-FARVSGYCEQTD 943 (1449)
Q Consensus 871 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~---~-~~~~~gyv~Q~d 943 (1449)
.+...||++|++.|++||.+||+|||||||||||-+|+|...+ .+|+|.+.|++... + . ..+.+|+|+|..
T Consensus 20 ~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF 97 (228)
T COG4181 20 EGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSF 97 (228)
T ss_pred CcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEee
Confidence 4567899999999999999999999999999999999998765 58999999988532 1 2 346899999999
Q ss_pred CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000517 944 IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIF 1023 (1449)
Q Consensus 944 ~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~ill 1023 (1449)
.+.|++|..||+.....++... .........+.|+.+||.+..+.+. .+|||||+|||+||||++..|+|||
T Consensus 98 ~Lip~ltAlENV~lPleL~ge~---~~~~~~~A~~lL~~vGLg~Rl~HyP-----~qLSGGEQQRVAiARAfa~~P~vLf 169 (228)
T COG4181 98 HLIPNLTALENVALPLELRGES---SADSRAGAKALLEAVGLGKRLTHYP-----AQLSGGEQQRVALARAFAGRPDVLF 169 (228)
T ss_pred eccccchhhhhccchhhhcCCc---cccHHHHHHHHHHHhCcccccccCc-----cccCchHHHHHHHHHHhcCCCCEEe
Confidence 9999999999999888877532 2233455778999999988776664 3799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000517 1024 MDEPTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIY 1082 (1449)
Q Consensus 1024 LDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~ 1082 (1449)
.||||-+||..+...|.+++-.+.. .|.|.|++||||. +...|||.+-|. .|+++.
T Consensus 170 ADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~-~G~l~~ 226 (228)
T COG4181 170 ADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLR-SGRLVE 226 (228)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeee-cceecc
Confidence 9999999999999999999988864 5999999999985 678899999997 588874
No 226
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-35 Score=333.24 Aligned_cols=216 Identities=25% Similarity=0.352 Sum_probs=176.8
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISGY 925 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G~ 925 (1449)
+.++|++++++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 5 l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~ 71 (258)
T PRK14241 5 IDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGE 71 (258)
T ss_pred EEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCE
Confidence 56677766542 245999999999999999999999999999999999976532 25899999998
Q ss_pred cCc-----cccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000517 926 PKV-----QETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD----AIKDSLVGIP 996 (1449)
Q Consensus 926 ~~~-----~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~~ 996 (1449)
+.. ...+++.++|++|++.+++.+||+||+.+....+. ....+..++.++++++.++|. +..++.
T Consensus 72 ~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 145 (258)
T PRK14241 72 DLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP---- 145 (258)
T ss_pred eccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC----
Confidence 752 12345679999999999999999999988654331 112334456788899999984 233443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe-
Q 000517 997 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK- 1075 (1449)
Q Consensus 997 ~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~- 1075 (1449)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.
T Consensus 146 -~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~~ 222 (258)
T PRK14241 146 -GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFNL 222 (258)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEec
Confidence 347999999999999999999999999999999999999999999999864 689999999986 5778899999997
Q ss_pred ----cCcEEEEecCC
Q 000517 1076 ----TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 ----~gG~~v~~G~~ 1086 (1449)
+.|++++.|+.
T Consensus 223 ~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 223 EATGKPGRLVEIDDT 237 (258)
T ss_pred ccCCCCceEEecCCH
Confidence 25899999985
No 227
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=7.2e-35 Score=327.70 Aligned_cols=198 Identities=23% Similarity=0.361 Sum_probs=167.4
Q ss_pred eccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCHHHHHH
Q 000517 877 LYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEESVI 956 (1449)
Q Consensus 877 L~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~e~l~ 956 (1449)
|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQP--TSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 5799999999999999999999999999999998654 5899999998754321 12489999999999999999998
Q ss_pred HHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000517 957 FSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAA 1036 (1449)
Q Consensus 957 f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~ 1036 (1449)
+...... .....+...+.++++++.++|.+..++.++ .||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVL-PDLSKSERRAIVEEHIALVGLTEAADKRPG-----QLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhcc-cCCCHHHHHHHHHHHHHHcCCHHHHcCChh-----hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 7632111 122334445668899999999887777654 7999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1037 AIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1037 ~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
..+.+.|++++++ |+|||++||+++ ++.+.+|++++|. +|+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~-~G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLT-NGPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEe-CCcEecccCc
Confidence 9999999998764 899999999986 5778899999998 5899988864
No 228
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-35 Score=336.18 Aligned_cols=201 Identities=23% Similarity=0.338 Sum_probs=170.0
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-----ccccceEEEEccCCCC-CC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-----ETFARVSGYCEQTDIH-SP 947 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-----~~~~~~~gyv~Q~d~~-~~ 947 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++.. +.
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRP--QKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIF 91 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CccEEEECCEEcccccCCHHHHHhheEEEeeChhhccc
Confidence 4599999999999999999999999999999999998665 58999999987531 2345679999998753 34
Q ss_pred CCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000517 948 NITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1027 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEP 1027 (1449)
..|+.||+.+....+ ....+...+.++++++.+||.+..++.++ .||||||||++||++|+.+|++|+||||
T Consensus 92 ~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrl~laraL~~~p~lllLDEP 163 (271)
T PRK13638 92 YTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQPIQ-----CLSHGQKKRVAIAGALVLQARYLLLDEP 163 (271)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCCch-----hCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 568999998764332 12233445668889999999887777643 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1028 TTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1028 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|. +|++++.|+.
T Consensus 164 t~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 220 (271)
T PRK13638 164 TAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLR-QGQILTHGAP 220 (271)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999877999999999986 4667899999997 5899999975
No 229
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=6.1e-35 Score=325.56 Aligned_cols=194 Identities=25% Similarity=0.403 Sum_probs=163.2
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC------CCceEEEEcCCCccCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV------PPKTSAYISQNDLHIA 258 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 258 (1449)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++
T Consensus 17 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 17 PALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 5899999999999999999999999999999999999987 999999998875432 1357999999998999
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
.+||+||+.++....+... .+ .+..++.+++.+||++..++.+++
T Consensus 94 ~~tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~- 138 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIGVPP----------RD------------------------ANERVSAALEKVGLEGKAHALPMQ- 138 (216)
T ss_pred cccHHHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCChhhhhCChhh-
Confidence 9999999998764322100 00 011246688999998888887765
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+.|+|++ +|..+++.++||++++|+
T Consensus 139 ----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~v-sH~~~~~~~~~d~i~~l~ 212 (216)
T TIGR00960 139 ----LSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-RGTTVLVA-THDINLVETYRHRTLTLS 212 (216)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CCCEEEEE-eCCHHHHHHhCCEEEEEe
Confidence 999999999999999999999999999999999999999999999865 46676665 455678888999999999
Q ss_pred CCeE
Q 000517 419 EGKI 422 (1449)
Q Consensus 419 ~G~i 422 (1449)
+|++
T Consensus 213 ~G~i 216 (216)
T TIGR00960 213 RGRL 216 (216)
T ss_pred CCcC
Confidence 9974
No 230
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=8.3e-35 Score=345.14 Aligned_cols=205 Identities=22% Similarity=0.343 Sum_probs=177.1
Q ss_pred cccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc----Ccc---c---cc-cceEEEE
Q 000517 871 DRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYP----KVQ---E---TF-ARVSGYC 939 (1449)
Q Consensus 871 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~----~~~---~---~~-~~~~gyv 939 (1449)
++...+|+|+||+|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+ ... . .. ++.++|+
T Consensus 34 ~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p--~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 34 TGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPV--SRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred hCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 4456799999999999999999999999999999999998765 58999999952 211 1 12 2579999
Q ss_pred ccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCC
Q 000517 940 EQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANP 1019 (1449)
Q Consensus 940 ~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p 1019 (1449)
+|+..++|.+||+||+.|+...+ .....+..+.++++++.+||.+..+..++ .||||||||++|||||+.+|
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~~-----~LSgGq~QRV~LARALa~~P 183 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKPG-----ELSGGMQQRVGLARAFAMDA 183 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999876543 23345566788999999999988887754 79999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1020 SIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1020 ~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
+||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|+ +|+++..|+++
T Consensus 184 ~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~-~G~iv~~g~~~ 250 (382)
T TIGR03415 184 DILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIME-GGRIIQHGTPE 250 (382)
T ss_pred CEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEecCHH
Confidence 999999999999999999999999999765 999999999986 5778999999997 58999999874
No 231
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=335.36 Aligned_cols=204 Identities=24% Similarity=0.342 Sum_probs=172.0
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCC-ccCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQND-LHIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~l 260 (1449)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ ..++.+
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (279)
T PRK13650 21 YTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGA 97 (279)
T ss_pred eeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccc
Confidence 4899999999999999999999999999999999999997 9999999998764322 35799999986 367789
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||+||+.|+....+.. +.+ .+..++.+++.+||++..+..+++
T Consensus 98 tv~eni~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~--- 140 (279)
T PRK13650 98 TVEDDVAFGLENKGIP----------HEE------------------------MKERVNEALELVGMQDFKEREPAR--- 140 (279)
T ss_pred cHHHHHHhhHHhCCCC----------HHH------------------------HHHHHHHHHHHCCCHhHhhCCccc---
Confidence 9999999875432211 000 011346789999999888887765
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|+ .+++ ..+|+|++|++|
T Consensus 141 --LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~-~~~~-~~~dri~~l~~G 216 (279)
T PRK13650 141 --LSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHD-LDEV-ALSDRVLVMKNG 216 (279)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC-HHHH-HhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999976557788877665 4556 589999999999
Q ss_pred eEEEecChhhHH
Q 000517 421 KIVYHGPQDHVL 432 (1449)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1449)
+++..|+++++.
T Consensus 217 ~i~~~g~~~~~~ 228 (279)
T PRK13650 217 QVESTSTPRELF 228 (279)
T ss_pred EEEEECCHHHHH
Confidence 999999988765
No 232
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-35 Score=334.23 Aligned_cols=206 Identities=28% Similarity=0.399 Sum_probs=172.6
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCCCCCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSPNI 949 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~l 949 (1449)
++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|+..+++.+
T Consensus 14 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 14 TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTP--QSGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 34699999999999999999999999999999999997654 58999999986432 23456799999998888889
Q ss_pred CHHHHHHHHHHhccC-CCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000517 950 TVEESVIFSAWLRLA-PEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1028 (1449)
Q Consensus 950 Tv~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPT 1028 (1449)
|+.||+.++...... .........+.++++++.++|.+..++.++ .||||||||++||+||+.+|++|+|||||
T Consensus 92 tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllDEP~ 166 (255)
T PRK11231 92 TVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRLT-----DLSGGQRQRAFLAMVLAQDTPVVLLDEPT 166 (255)
T ss_pred cHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 999999875211000 011112334568899999999887777653 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1029 TGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1029 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
+|||+.++..+.+.|++++++|+|||++||++. ++.+.+|++++|. +|+++..|+.+
T Consensus 167 ~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~-~G~i~~~~~~~ 223 (255)
T PRK11231 167 TYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLA-NGHVMAQGTPE 223 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEE-CCeEEEEcCHH
Confidence 999999999999999998777999999999986 5778999999997 58999998864
No 233
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.5e-34 Score=332.70 Aligned_cols=206 Identities=24% Similarity=0.379 Sum_probs=172.5
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC------CCceEEEEcCCCccCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV------PPKTSAYISQNDLHIA 258 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 258 (1449)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|+..+++
T Consensus 21 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 97 (269)
T PRK11831 21 CIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFT 97 (269)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccCC
Confidence 5899999999999999999999999999999999999987 999999998875432 1356999999988899
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
.+||+||+.+....... . .+.+ ....++.+++.+||++..++.+++
T Consensus 98 ~~tv~enl~~~~~~~~~-~--------~~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~- 143 (269)
T PRK11831 98 DMNVFDNVAYPLREHTQ-L--------PAPL------------------------LHSTVMMKLEAVGLRGAAKLMPSE- 143 (269)
T ss_pred CCCHHHHHHHHHHHccC-C--------CHHH------------------------HHHHHHHHHHHcCChhhhhCChhh-
Confidence 99999999886432100 0 0000 011245678999999888888766
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++. |..+++.+++|++++|+
T Consensus 144 ----LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivs-H~~~~~~~~~d~v~~l~ 218 (269)
T PRK11831 144 ----LSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVS-HDVPEVLSIADHAYIVA 218 (269)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEe-cCHHHHHHhhCEEEEEE
Confidence 9999999999999999999999999999999999999999999998764466766654 55678889999999999
Q ss_pred CCeEEEecChhhHH
Q 000517 419 EGKIVYHGPQDHVL 432 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1449)
+|++++.|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (269)
T PRK11831 219 DKKIVAHGSAQALQ 232 (269)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988764
No 234
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-35 Score=333.91 Aligned_cols=218 Identities=25% Similarity=0.330 Sum_probs=180.3
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|++++++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTP--AHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEEh
Confidence 567777776542 24699999999999999999999999999999999998654 489999999865
Q ss_pred cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccC-CCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000517 928 VQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLA-PEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLST 1003 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1003 (1449)
.. ..+++.++|++|++.+++..|++||+.+...-... .....+..++.++++++.++|.+..++.+ +.|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQSV-----DTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCh
Confidence 32 23456799999999988899999999764211100 00011233456889999999988777765 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000517 1004 EQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIY 1082 (1449)
Q Consensus 1004 GqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~ 1082 (1449)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++.+.+|++++|. +|++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~-~G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALR-EGKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEE
Confidence 9999999999999999999999999999999999999999999764 899999999986 5788999999997 589999
Q ss_pred ecCCC
Q 000517 1083 CGPLG 1087 (1449)
Q Consensus 1083 ~G~~~ 1087 (1449)
.|+..
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 99864
No 235
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.2e-34 Score=327.15 Aligned_cols=202 Identities=28% Similarity=0.421 Sum_probs=170.6
Q ss_pred cccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEc-cCCCCCC
Q 000517 871 DRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCE-QTDIHSP 947 (1449)
Q Consensus 871 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~-Q~d~~~~ 947 (1449)
++.+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++ |++.+++
T Consensus 31 ~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 31 YREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQP--TSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred cCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 4456799999999999999999999999999999999997655 58999999976422 23456799997 5567778
Q ss_pred CCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000517 948 NITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1027 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEP 1027 (1449)
.+|++|++.+...++. ...++..+.++++++.++|.+..++.++ .||||||||++||++|+.+|++|+||||
T Consensus 109 ~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEP 180 (236)
T cd03267 109 DLPVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPVR-----QLSLGQRMRAEIAAALLHEPEILFLDEP 180 (236)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 8999999988654431 2233445567889999999888887754 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1028 TTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1028 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|. +|++++.|
T Consensus 181 t~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~g 236 (236)
T cd03267 181 TIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVID-KGRLLYDG 236 (236)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEe-CCEEEecC
Confidence 9999999999999999999764 899999999986 5678899999997 58988765
No 236
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-35 Score=335.52 Aligned_cols=218 Identities=27% Similarity=0.396 Sum_probs=179.0
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|+++.+ +++.+|+|+||++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 11 ~l~i~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRV-------------PGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPP--SEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEE-------------CCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEeh
Confidence 36677776543 234699999999999999999999999999999999997654 589999999764
Q ss_pred c---cccccceEEEEccCCCCCCCCCHHHHHHHHHHhccC-CCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000517 928 V---QETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLA-PEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLST 1003 (1449)
Q Consensus 928 ~---~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1003 (1449)
. ...+++.++|++|+..+++.+|+.||+.+....... ........++.++++++.++|.+..++.++ .|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVD-----SLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCcc-----cCCH
Confidence 2 223456799999998888899999999875321100 001112334568899999999887777754 7999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000517 1004 EQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIY 1082 (1449)
Q Consensus 1004 GqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~ 1082 (1449)
|||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|. +|+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~-~G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALR-GGEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCeEEE
Confidence 9999999999999999999999999999999999999999999765 899999999986 5778899999997 589999
Q ss_pred ecCCC
Q 000517 1083 CGPLG 1087 (1449)
Q Consensus 1083 ~G~~~ 1087 (1449)
.|+..
T Consensus 229 ~~~~~ 233 (265)
T PRK10575 229 QGTPA 233 (265)
T ss_pred ecCHH
Confidence 98864
No 237
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-35 Score=328.37 Aligned_cols=201 Identities=22% Similarity=0.343 Sum_probs=167.1
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-------CceEEEEcCCCcc
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-------PKTSAYISQNDLH 256 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 256 (1449)
.++|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 35999999999999999999999999999999999999987 9999999998765432 2469999999888
Q ss_pred CCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccc
Q 000517 257 IAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVG 336 (1449)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 336 (1449)
++.+||+||+.+.....+... .+ .+..++.+++.+||++..++.++
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~gl~~~~~~~~~ 144 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------AE------------------------INSRALEMLAAVGLEHRANHRPS 144 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCCchhhhCChh
Confidence 999999999998654321100 00 01124668899999887777766
Q ss_pred ccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEE
Q 000517 337 NAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIIL 416 (1449)
Q Consensus 337 ~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~l 416 (1449)
+ ||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|+ .+++.. +|++++
T Consensus 145 ~-----LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~-~~~~~~-~~~~~~ 217 (233)
T PRK11629 145 E-----LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHD-LQLAKR-MSRQLE 217 (233)
T ss_pred h-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCC-HHHHHh-hCEEEE
Confidence 5 999999999999999999999999999999999999999999999876456777776655 455554 589999
Q ss_pred EeCCeEEEecCh
Q 000517 417 MAEGKIVYHGPQ 428 (1449)
Q Consensus 417 L~~G~iv~~G~~ 428 (1449)
|++|+++..|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999988864
No 238
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.4e-35 Score=322.61 Aligned_cols=197 Identities=24% Similarity=0.396 Sum_probs=166.2
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCCCHHH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTVRE 264 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 264 (1449)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+|
T Consensus 14 ~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e 89 (210)
T cd03269 14 TALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVID 89 (210)
T ss_pred EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHH
Confidence 5899999999999999999999999999999999999987 9999999987754 23467999999998899999999
Q ss_pred HHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCC
Q 000517 265 TVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGIS 344 (1449)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlS 344 (1449)
|+.+.....+... .+ ....++++++.+||++..++.+++ ||
T Consensus 90 ~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS 130 (210)
T cd03269 90 QLVYLAQLKGLKK----------EE------------------------ARRRIDEWLERLELSEYANKRVEE-----LS 130 (210)
T ss_pred HHHHHHHHcCCCh----------HH------------------------HHHHHHHHHHHcCChHHHhCcHhh-----CC
Confidence 9988654332110 00 011246678999998877877765 99
Q ss_pred hhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEE
Q 000517 345 GGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVY 424 (1449)
Q Consensus 345 GGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~ 424 (1449)
|||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+ .++|++++ +|..+++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~~~tii~~-sH~~~~~~~~~d~i~~l~~g~i~~ 208 (210)
T cd03269 131 KGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-AGKTVILS-THQMELVEELCDRVLLLNKGRAVL 208 (210)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEE-CCCHHHHHHhhhEEEEEeCCEEEe
Confidence 9999999999999999999999999999999999999999999875 36666665 455667888999999999999987
Q ss_pred ec
Q 000517 425 HG 426 (1449)
Q Consensus 425 ~G 426 (1449)
.|
T Consensus 209 ~~ 210 (210)
T cd03269 209 YG 210 (210)
T ss_pred cC
Confidence 64
No 239
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8.3e-35 Score=327.70 Aligned_cols=201 Identities=24% Similarity=0.331 Sum_probs=168.2
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccc----cccceEEEEccCCCCCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQE----TFARVSGYCEQTDIHSPN 948 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~----~~~~~~gyv~Q~d~~~~~ 948 (1449)
++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+.... ..++.++|++|++.+++.
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 12 QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPV--KSGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 34699999999999999999999999999999999998664 589999999875321 134579999999999999
Q ss_pred CCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcC-CcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000517 949 ITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIE-LDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1027 (1449)
Q Consensus 949 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEP 1027 (1449)
+|+.||+.+....+. .. ..+.++++++.++ +.+..++.+ ..||||||||++||++|+.+|++++||||
T Consensus 90 ~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~illlDEP 158 (230)
T TIGR03410 90 LTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRRG-----GDLSGGQQQQLAIARALVTRPKLLLLDEP 158 (230)
T ss_pred CcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCC
Confidence 999999988654321 11 2234567777776 555566654 37999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1028 TTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1028 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
|+|||+.++..+.+.|++++++ |+|||++||+++ ++...+|++++|. +|++++.|+.++
T Consensus 159 t~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~-~g~i~~~~~~~~ 218 (230)
T TIGR03410 159 TEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVME-RGRVVASGAGDE 218 (230)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEECCHHH
Confidence 9999999999999999998764 899999999986 5667899999997 589999998753
No 240
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.4e-33 Score=372.78 Aligned_cols=135 Identities=21% Similarity=0.320 Sum_probs=108.9
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 000517 945 HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI-KDSLVGIPGVNGLSTEQRKRLTIAVELV---ANPS 1020 (1449)
Q Consensus 945 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~Ia~aL~---~~p~ 1020 (1449)
.+...||.|+|.++..-........++..+.+ ++++.+||.+. .+..+ ..||||||||++||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~~-----~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRPL-----SSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 45678999999887552221111223344556 47899999875 56654 379999999999999998 6999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe-----cCcEEEEecCCC
Q 000517 1021 IIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK-----TGGRIIYCGPLG 1087 (1449)
Q Consensus 1021 illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~-----~gG~~v~~G~~~ 1087 (1449)
+++|||||+|||+.+...+++.|+++++.|.|||+++|++. .+ ..+|+++.|. .+|+++..|+++
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999986 34 8999999995 368999999874
No 241
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=330.62 Aligned_cols=216 Identities=22% Similarity=0.305 Sum_probs=176.3
Q ss_pred cEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCC--C-CeeEEEEEEc
Q 000517 847 LTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKT--S-GYVEGEIKIS 923 (1449)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~I~i~ 923 (1449)
..+.++|+++.++ +..+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++
T Consensus 12 ~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~ 78 (260)
T PRK10744 12 SKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLD 78 (260)
T ss_pred ceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEEC
Confidence 3577888876542 2359999999999999999999999999999999999754 2 1358999999
Q ss_pred CccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----ccccccc
Q 000517 924 GYPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVG 994 (1449)
Q Consensus 924 G~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg 994 (1449)
|.+... ..+++.++|++|+..+++ .|++||+.+...... ..+.+..++.++++++.+++.+ ..+..
T Consensus 79 g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-- 153 (260)
T PRK10744 79 GENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS-- 153 (260)
T ss_pred CEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC--
Confidence 987531 234677999999988777 899999987653321 1233444567889999999842 33443
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEE
Q 000517 995 IPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILL 1074 (1449)
Q Consensus 995 ~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l 1074 (1449)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++ ++.|||++||++. ++.+.+|++++|
T Consensus 154 ---~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l 228 (260)
T PRK10744 154 ---GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAFM 228 (260)
T ss_pred ---CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEE
Confidence 34799999999999999999999999999999999999999999999986 4789999999986 566789999999
Q ss_pred ecCcEEEEecCC
Q 000517 1075 KTGGRIIYCGPL 1086 (1449)
Q Consensus 1075 ~~gG~~v~~G~~ 1086 (1449)
. +|+++..|+.
T Consensus 229 ~-~G~i~~~g~~ 239 (260)
T PRK10744 229 Y-LGELIEFGNT 239 (260)
T ss_pred E-CCEEEEeCCH
Confidence 8 5899999875
No 242
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=332.12 Aligned_cols=203 Identities=23% Similarity=0.313 Sum_probs=169.8
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCc-cCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDL-HIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 260 (1449)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++..
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 4899999999999999999999999999999999999997 9999999998754321 356999999863 45678
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||+||+.|+....+.. +.+ .+..++.+++.+||.+..++.+.+
T Consensus 96 tv~e~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~L~~~~~~~~~~--- 138 (274)
T PRK13647 96 TVWDDVAFGPVNMGLD----------KDE------------------------VERRVEEALKAVRMWDFRDKPPYH--- 138 (274)
T ss_pred cHHHHHHhhHHHcCCC----------HHH------------------------HHHHHHHHHHHCCCHHHhcCChhh---
Confidence 9999999865422110 000 011346688999998888888775
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++. +.|+|++. |..+++.++||+|++|++|
T Consensus 139 --LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-g~tili~t-H~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 139 --LSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQ-GKTVIVAT-HDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHC-CCEEEEEe-CCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998753 66766654 5567788999999999999
Q ss_pred eEEEecChhhH
Q 000517 421 KIVYHGPQDHV 431 (1449)
Q Consensus 421 ~iv~~G~~~~~ 431 (1449)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998654
No 243
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.1e-34 Score=346.82 Aligned_cols=209 Identities=25% Similarity=0.435 Sum_probs=175.3
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1449)
+++|+|+|+.+++||+++|+||||||||||||+|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 35999999999999999999999999999999999999997 9999999998765432 46799999999888999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||+||+.++..-... ... .... .....++++++.+||.+..|+.+.+
T Consensus 93 tv~e~v~~~~~~~~~--~~~---~~~~-------------------------~~~~~v~~~le~vgl~~~~~~~~~~--- 139 (402)
T PRK09536 93 DVRQVVEMGRTPHRS--RFD---TWTE-------------------------TDRAAVERAMERTGVAQFADRPVTS--- 139 (402)
T ss_pred CHHHHHHhccchhcc--ccc---CCCH-------------------------HHHHHHHHHHHHcCCchhhcCChhh---
Confidence 999999885421100 000 0000 0112357789999999888888765
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
|||||||||.|||||+++|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++ +|..+++.++||++++|++|
T Consensus 140 --LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g~TIIiv-sHdl~~~~~~adrii~l~~G 215 (402)
T PRK09536 140 --LSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DGKTAVAA-IHDLDLAARYCDELVLLADG 215 (402)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cCCEEEEE-ECCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999986 46676665 56678899999999999999
Q ss_pred eEEEecChhhHH
Q 000517 421 KIVYHGPQDHVL 432 (1449)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1449)
++++.|+++++.
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999998864
No 244
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.6e-35 Score=327.04 Aligned_cols=195 Identities=27% Similarity=0.435 Sum_probs=163.4
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC-------CCceEEEEcCCCcc
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV-------PPKTSAYISQNDLH 256 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~ 256 (1449)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999987 999999998876432 13579999999999
Q ss_pred CCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccc
Q 000517 257 IAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVG 336 (1449)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 336 (1449)
++.+||+||+.++....+... .+ .+..++.+++.+||++..++.++
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~ 139 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------KE------------------------RRERAEELLERVGLGDRLNHYPS 139 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------HH------------------------HHHHHHHHHHHcCCchhhhcChh
Confidence 999999999998764332100 00 01124668899999887787776
Q ss_pred ccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEE
Q 000517 337 NAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIIL 416 (1449)
Q Consensus 337 ~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~l 416 (1449)
+ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..++|+|++.|++ +++. .||++++
T Consensus 140 ~-----LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~-~~d~v~~ 212 (218)
T cd03255 140 E-----LSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDP-ELAE-YADRIIE 212 (218)
T ss_pred h-----cCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCH-HHHh-hhcEEEE
Confidence 5 9999999999999999999999999999999999999999999998764467777766554 4565 9999999
Q ss_pred EeCCeE
Q 000517 417 MAEGKI 422 (1449)
Q Consensus 417 L~~G~i 422 (1449)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 245
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=335.98 Aligned_cols=200 Identities=26% Similarity=0.383 Sum_probs=168.0
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-------ccccceEEEEccCC--C
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-------ETFARVSGYCEQTD--I 944 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-------~~~~~~~gyv~Q~d--~ 944 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++ .
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVP--TQGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQ 97 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccCHHHHHhheEEEeeChhhh
Confidence 3599999999999999999999999999999999998655 58999999987532 23456799999986 3
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000517 945 HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-IKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIF 1023 (1449)
Q Consensus 945 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~ill 1023 (1449)
++ ..||+||+.+..... ....+...+.++++++.++|.+ ..+..+ ..||||||||++||++|+.+|++|+
T Consensus 98 ~~-~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lll 168 (280)
T PRK13649 98 LF-EETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKNP-----FELSGGQMRRVAIAGILAMEPKILV 168 (280)
T ss_pred hc-cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEE
Confidence 44 469999998764332 1223344566788999999973 456554 3799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1024 MDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1024 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 169 LDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 229 (280)
T PRK13649 169 LDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLE-KGKLVLSGKP 229 (280)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 99999999999999999999999877999999999986 5667899999998 5899998875
No 246
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-34 Score=315.84 Aligned_cols=190 Identities=57% Similarity=0.952 Sum_probs=159.9
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++++|+++.++.. .+++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 35677777665321 012469999999999999999999999999999999999743223689999999876
Q ss_pred ccccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000517 928 VQETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRK 1007 (1449)
Q Consensus 928 ~~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1007 (1449)
. ..+++.++|++|++.+++.+|++||+.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 4 345667999999998899999999998642110 49999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1008 RLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1008 Rl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
|++||++|+.+|++|+|||||+|||+.++..+++.|+++++.|+|||++||+++.++.+.+|++++|.++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999987799999999998644678899999997448999875
No 247
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=9e-35 Score=332.56 Aligned_cols=206 Identities=29% Similarity=0.427 Sum_probs=172.3
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCCCCCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSPNI 949 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~l 949 (1449)
++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+
T Consensus 13 ~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 13 GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRP--DAGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 34699999999999999999999999999999999997654 58999999987532 23455689999998777889
Q ss_pred CHHHHHHHHHH-hccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000517 950 TVEESVIFSAW-LRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1028 (1449)
Q Consensus 950 Tv~e~l~f~~~-lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPT 1028 (1449)
||.||+.+... .+...........+.+.++++.+++.+..++.++ .||||||||++||++|+.+|++++|||||
T Consensus 91 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt 165 (256)
T TIGR03873 91 TVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDMS-----TLSGGERQRVHVARALAQEPKLLLLDEPT 165 (256)
T ss_pred CHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCcc
Confidence 99999987521 1100001112334568899999999887777654 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1029 TGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1029 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
+|||+.+...+.+.|+++.++|.|||+++|+++ ++.+.+|++++|. +|+++..|+.+
T Consensus 166 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~~ 222 (256)
T TIGR03873 166 NHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLD-GGRVVAAGPPR 222 (256)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEe-CCCEEEecCHH
Confidence 999999999999999999877899999999986 5778899999997 58999999864
No 248
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.7e-34 Score=324.68 Aligned_cols=213 Identities=27% Similarity=0.392 Sum_probs=174.4
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|+++.++.. .....+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDG--SSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCeeEEECCEEc
Confidence 36777877654311 0013599999999999999999999999999999999998655 589999999875
Q ss_pred ccc---c---c-cceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000517 928 VQE---T---F-ARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNG 1000 (1449)
Q Consensus 928 ~~~---~---~-~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1000 (1449)
... . . ++.++|++|++.+++.+|+.||+.+....+. .......+.++++++.++|.+..+..++ .
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLPA-----Q 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCChh-----h
Confidence 321 1 1 3579999999988899999999988654321 2233445678999999999887777653 7
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000517 1001 LSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGR 1079 (1449)
Q Consensus 1001 LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~ 1079 (1449)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|+++ .+ +.+|++++|. +|+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~-~g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLV-NGQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEE-CCE
Confidence 9999999999999999999999999999999999999999999999754 899999999986 34 5699999997 588
Q ss_pred EEE
Q 000517 1080 IIY 1082 (1449)
Q Consensus 1080 ~v~ 1082 (1449)
+++
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 864
No 249
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1e-34 Score=321.44 Aligned_cols=190 Identities=26% Similarity=0.382 Sum_probs=162.4
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc---c----ccccceEEEEccCCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV---Q----ETFARVSGYCEQTDIH 945 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~---~----~~~~~~~gyv~Q~d~~ 945 (1449)
++.+|+|+||++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.. . ...++.++|++|++.+
T Consensus 10 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 87 (206)
T TIGR03608 10 DKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKF--DSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFAL 87 (206)
T ss_pred CEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccchhhHHHHHHhCeeEEecchhh
Confidence 34699999999999999999999999999999999998664 5899999998732 1 1245679999999998
Q ss_pred CCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000517 946 SPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMD 1025 (1449)
Q Consensus 946 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLD 1025 (1449)
++.+|++||+.+....+ ........+.++++++.++|.+..++.+. .||||||||++||++|+.+|++|+||
T Consensus 88 ~~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~lS~G~~qr~~laral~~~p~llllD 159 (206)
T TIGR03608 88 IENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKIY-----ELSGGEQQRVALARAILKDPPLILAD 159 (206)
T ss_pred ccCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCChh-----hCCHHHHHHHHHHHHHHcCCCEEEEe
Confidence 88999999999865432 12234445678899999999887777653 79999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEE
Q 000517 1026 EPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILL 1074 (1449)
Q Consensus 1026 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l 1074 (1449)
|||+|||+.+...+.+.|+++.++|.|||+++|++. ..+.+|++++|
T Consensus 160 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 160 EPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 999999999999999999999777999999999975 34678998764
No 250
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.3e-34 Score=324.51 Aligned_cols=202 Identities=25% Similarity=0.452 Sum_probs=168.4
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 260 (1449)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 14 QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 5899999999999999999999999999999999999987 9999999988754332 35699999999999999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHh-CCCccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKIL-GLDVCADTMVGNAM 339 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~l-gL~~~~dt~vg~~~ 339 (1449)
||+||+.+.....+ .. + .....+.+++.+ ++++..++.+++
T Consensus 91 t~~~~l~~~~~~~~--~~-----~-----------------------------~~~~~~~~l~~~~~l~~~~~~~~~~-- 132 (222)
T cd03224 91 TVEENLLLGAYARR--RA-----K-----------------------------RKARLERVYELFPRLKERRKQLAGT-- 132 (222)
T ss_pred cHHHHHHHHhhhcC--ch-----h-----------------------------HHHHHHHHHHHHHhhhhhhhCchhh--
Confidence 99999988654321 00 0 001134456666 466666777665
Q ss_pred cccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeC
Q 000517 340 RRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAE 419 (1449)
Q Consensus 340 ~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~ 419 (1449)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++. |...++.+++|++++|++
T Consensus 133 ---LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~s-H~~~~~~~~~d~i~~l~~ 207 (222)
T cd03224 133 ---LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-EGVTILLVE-QNARFALEIADRAYVLER 207 (222)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CCHHHHHHhccEEEEeeC
Confidence 999999999999999999999999999999999999999999999875 466766665 556788899999999999
Q ss_pred CeEEEecChhhHH
Q 000517 420 GKIVYHGPQDHVL 432 (1449)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1449)
|+++..|+.+++.
T Consensus 208 G~i~~~~~~~~~~ 220 (222)
T cd03224 208 GRVVLEGTAAELL 220 (222)
T ss_pred CeEEEeCCHHHHh
Confidence 9999999987653
No 251
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.5e-34 Score=324.51 Aligned_cols=203 Identities=33% Similarity=0.557 Sum_probs=169.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC---CCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLD---PSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~---~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 260 (1449)
+++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.+
T Consensus 20 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPGL 96 (226)
T ss_pred cccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcCC
Confidence 569999999999999999999999999999999999998 66 999999998875433456799999999999999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHH-HHHHhCCCccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDY-ILKILGLDVCADTMVGNAM 339 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~-il~~lgL~~~~dt~vg~~~ 339 (1449)
||+||+.|+.......... ... .....+. .++.+++.+..++.+++
T Consensus 97 tv~enl~~~~~~~~~~~~~-------~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (226)
T cd03234 97 TVRETLTYTAILRLPRKSS-------DAI------------------------RKKRVEDVLLRDLALTRIGGNLVKG-- 143 (226)
T ss_pred cHHHHHHHHHHhhcccccc-------hHH------------------------HHHHHHHHHHHhhcchhhhcccccC--
Confidence 9999999876533211000 000 0001233 78888888777777665
Q ss_pred cccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeC
Q 000517 340 RRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAE 419 (1449)
Q Consensus 340 ~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~ 419 (1449)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++.|++..++.+++|++++|++
T Consensus 144 ---LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~~tiii~sh~~~~~~~~~~d~i~~l~~ 219 (226)
T cd03234 144 ---ISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RNRIVILTIHQPRSDLFRLFDRILLLSS 219 (226)
T ss_pred ---cCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEecCCCHHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999865 4778888877766789999999999999
Q ss_pred CeEEEec
Q 000517 420 GKIVYHG 426 (1449)
Q Consensus 420 G~iv~~G 426 (1449)
|+++++|
T Consensus 220 G~i~~~g 226 (226)
T cd03234 220 GEIVYSG 226 (226)
T ss_pred CEEEecC
Confidence 9999876
No 252
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-34 Score=337.23 Aligned_cols=221 Identities=19% Similarity=0.275 Sum_probs=178.2
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCC-C-eeEEEEEEcCcc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTS-G-YVEGEIKISGYP 926 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~-~-~~~G~I~i~G~~ 926 (1449)
++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|...+ + ..+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 5667776654321 1124699999999999999999999999999999999997643 1 358999999987
Q ss_pred Ccc---cc----ccceEEEEccCC--CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc---cccccc
Q 000517 927 KVQ---ET----FARVSGYCEQTD--IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI---KDSLVG 994 (1449)
Q Consensus 927 ~~~---~~----~~~~~gyv~Q~d--~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~---~~~~vg 994 (1449)
+.. .. .++.++|++|++ .+.|.+|+.+++........ ....++.++.+.++++.+||.+. .+..
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~-- 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLDVY-- 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHhCC--
Confidence 532 11 224699999997 47889999998876543321 22345556788999999999752 3433
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEE
Q 000517 995 IPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELIL 1073 (1449)
Q Consensus 995 ~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~ 1073 (1449)
+.+|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|+|++||+++ .+.+.+|++++
T Consensus 151 ---p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~v 226 (326)
T PRK11022 151 ---PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIV 226 (326)
T ss_pred ---chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEE
Confidence 347999999999999999999999999999999999999999999999976 4899999999986 46678999999
Q ss_pred EecCcEEEEecCCC
Q 000517 1074 LKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1074 l~~gG~~v~~G~~~ 1087 (1449)
|. +|++++.|+..
T Consensus 227 m~-~G~ive~g~~~ 239 (326)
T PRK11022 227 MY-AGQVVETGKAH 239 (326)
T ss_pred EE-CCEEEEECCHH
Confidence 98 59999999863
No 253
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=332.29 Aligned_cols=202 Identities=28% Similarity=0.370 Sum_probs=171.1
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-----ccccceEEEEccCCC-CCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-----ETFARVSGYCEQTDI-HSP 947 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-----~~~~~~~gyv~Q~d~-~~~ 947 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKP--TSGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 3599999999999999999999999999999999997654 48999999987531 124567999999963 334
Q ss_pred CCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000517 948 NITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1027 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEP 1027 (1449)
..||.||+.+..... ....++..+.+.++++.++|.+..++.++ .||||||||++|||+|+.+|++|+||||
T Consensus 93 ~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~~-----~LS~Gq~qrv~laral~~~p~llllDEP 164 (275)
T PRK13639 93 APTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPPH-----HLSGGQKKRVAIAGILAMKPEIIVLDEP 164 (275)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 579999998764321 12334445678899999999888887754 7999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1028 TTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1028 TsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
|+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|+ +|++++.|+.+
T Consensus 165 t~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~-~G~i~~~g~~~ 222 (275)
T PRK13639 165 TSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMS-DGKIIKEGTPK 222 (275)
T ss_pred CcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEeCCHH
Confidence 9999999999999999999877999999999976 5677899999998 58999999863
No 254
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=327.97 Aligned_cols=219 Identities=25% Similarity=0.332 Sum_probs=174.4
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCC--C-CeeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKT--S-GYVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~I~i~G 924 (1449)
.+.++|+++++. ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14242 6 KMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDG 72 (253)
T ss_pred EEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECC
Confidence 467778776542 2359999999999999999999999999999999999642 1 12589999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVN 999 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 999 (1449)
.+... ..+++.++|++|++.+++ .||+||+.+....+.. ...+...+.++++++.+++.+........ ...
T Consensus 73 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 148 (253)
T PRK14242 73 ENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLHE-SAL 148 (253)
T ss_pred EEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhhC-Ccc
Confidence 87532 234567999999988887 5999999887543311 12233456788899999985421111111 134
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000517 1000 GLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGR 1079 (1449)
Q Consensus 1000 ~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~ 1079 (1449)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|. +|+
T Consensus 149 ~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~~l~-~G~ 225 (253)
T PRK14242 149 GLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTAFFY-MGK 225 (253)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEEEEE-CCE
Confidence 7999999999999999999999999999999999999999999999854 799999999986 4678899999997 589
Q ss_pred EEEecCC
Q 000517 1080 IIYCGPL 1086 (1449)
Q Consensus 1080 ~v~~G~~ 1086 (1449)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14242 226 LIEVGPT 232 (253)
T ss_pred EEEeCCH
Confidence 9998875
No 255
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.4e-33 Score=319.93 Aligned_cols=170 Identities=24% Similarity=0.346 Sum_probs=135.2
Q ss_pred ceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCHHHHHHHHH
Q 000517 880 VTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEESVIFSA 959 (1449)
Q Consensus 880 vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~ 959 (1449)
=.++|..||+++++||||-||||+.++|+|..+| .+|+ ..+ -.++|=||--.-....||++-|.-..
T Consensus 360 ~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~~~-------~~vSyKPQyI~~~~~gtV~~~l~~~~ 426 (591)
T COG1245 360 EEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----EED-------LKVSYKPQYISPDYDGTVEDLLRSAI 426 (591)
T ss_pred cCCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----Ccc-------ceEeecceeecCCCCCcHHHHHHHhh
Confidence 3567889999999999999999999999998776 3565 111 23678888655556789999875432
Q ss_pred HhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHH
Q 000517 960 WLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIV 1039 (1449)
Q Consensus 960 ~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i 1039 (1449)
.-+.. ..-...++++-|+|+++.+..+. +|||||.|||+||.+|.+++++.+||||++.||++.+..+
T Consensus 427 ~~~~~-------~s~~~~ei~~pl~l~~i~e~~v~-----~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~v 494 (591)
T COG1245 427 RSAFG-------SSYFKTEIVKPLNLEDLLERPVD-----ELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIV 494 (591)
T ss_pred hhhcc-------cchhHHhhcCccchHHHHhcccc-----cCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHH
Confidence 21111 11234678889999999998865 7999999999999999999999999999999999999999
Q ss_pred HHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 1040 MRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 1040 ~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
-+.||++.. +++|.+++-||..+ +--..|++++..
T Consensus 495 akvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 495 AKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 999999975 48899999999753 444567777764
No 256
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.4e-34 Score=320.84 Aligned_cols=195 Identities=29% Similarity=0.432 Sum_probs=166.0
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCC-CCCceEEEEcCCCccCCCCCH
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEF-VPPKTSAYISQNDLHIAEMTV 262 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV 262 (1449)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 35999999999999999999999999999999999999987 99999999876532 124569999999988999999
Q ss_pred HHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccccc
Q 000517 263 RETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRG 342 (1449)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 342 (1449)
+||+.+.....+. .+..++.+++.+||++..++.+++
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKVKG----- 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhHhh-----
Confidence 9999886532210 001245678899998877877765
Q ss_pred CChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeE
Q 000517 343 ISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKI 422 (1449)
Q Consensus 343 lSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~i 422 (1449)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++. |..+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~t-H~~~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QGITVLISS-HLLSEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEc-CCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999876 567776665 556678889999999999999
Q ss_pred EEec
Q 000517 423 VYHG 426 (1449)
Q Consensus 423 v~~G 426 (1449)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 257
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-35 Score=364.03 Aligned_cols=221 Identities=22% Similarity=0.322 Sum_probs=183.9
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|+++++ +++.+|+||||+|++||+++|+||||||||||+++|+|...+++.+|+|.++|.+..
T Consensus 6 l~~~nl~~~~-------------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 72 (506)
T PRK13549 6 LEMKNITKTF-------------GGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQ 72 (506)
T ss_pred EEEeeeEEEe-------------CCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 6677777654 234699999999999999999999999999999999998654335899999998753
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000517 929 QE----TFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 929 ~~----~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1004 (1449)
.. ..++.+||++|++.+++.+||+||+.+....+.......+...+.++++++.++|.+..++.++ .||||
T Consensus 73 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG 147 (506)
T PRK13549 73 ASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPVG-----NLGLG 147 (506)
T ss_pred CCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccchh-----hCCHH
Confidence 21 2346699999999888999999999886433211111233345678899999999887787754 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
||||++||++|+.+|++|||||||+|||+.++..+++.|++++++|.|||++||+++ .+.+.+|++++|. +|++++.|
T Consensus 148 qkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~-~G~i~~~~ 225 (506)
T PRK13549 148 QQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIR-DGRHIGTR 225 (506)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEE-CCEEeeec
Confidence 999999999999999999999999999999999999999999877999999999986 5677899999998 58999999
Q ss_pred CCCCC
Q 000517 1085 PLGKH 1089 (1449)
Q Consensus 1085 ~~~~~ 1089 (1449)
+..+.
T Consensus 226 ~~~~~ 230 (506)
T PRK13549 226 PAAGM 230 (506)
T ss_pred ccccC
Confidence 88653
No 258
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-34 Score=327.87 Aligned_cols=206 Identities=27% Similarity=0.415 Sum_probs=171.8
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1449)
..+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 35899999999999999999999999999999999999987 9999999988754322 35789999999999999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc--ccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV--CADTMVGNA 338 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~--~~dt~vg~~ 338 (1449)
||+||+.+.....+... .+ ....++++++.+||++ ..++.+.+
T Consensus 91 tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~l~l~~~~~~~~~~~~- 135 (242)
T cd03295 91 TVEENIALVPKLLKWPK----------EK------------------------IRERADELLALVGLDPAEFADRYPHE- 135 (242)
T ss_pred cHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCCcHHHHhcChhh-
Confidence 99999988654322100 00 0112456789999985 56666654
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++++..++|+|++.| ...++.+++|+|++|+
T Consensus 136 ----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH-~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 136 ----LSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTH-DIDEAFRLADRIAIMK 210 (242)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEec-CHHHHHHhCCEEEEEE
Confidence 99999999999999999999999999999999999999999999987644677766655 4567889999999999
Q ss_pred CCeEEEecChhhHH
Q 000517 419 EGKIVYHGPQDHVL 432 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1449)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999887763
No 259
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-34 Score=328.35 Aligned_cols=214 Identities=25% Similarity=0.403 Sum_probs=172.1
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC------CCceEEEEcCCCccC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV------PPKTSAYISQNDLHI 257 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1449)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 35999999999999999999999999999999999999987 999999998876532 135699999999889
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGN 337 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 337 (1449)
+.+||+||+.++..... .. .... .+..+ + .....++.+++.+||.+..++.+++
T Consensus 91 ~~~tv~~~l~~~~~~~~-~~----~~~~------~~~~~--~-------------~~~~~~~~~l~~~~l~~~~~~~~~~ 144 (241)
T cd03256 91 ERLSVLENVLSGRLGRR-ST----WRSL------FGLFP--K-------------EEKQRALAALERVGLLDKAYQRADQ 144 (241)
T ss_pred ccCcHHHHHHhhhcccc-hh----hhhh------cccCc--H-------------HHHHHHHHHHHHcCChhhhCCCccc
Confidence 99999999987542110 00 0000 00000 0 0012345678999998777777655
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++..++|+|++. |..+++.+++|++++|
T Consensus 145 -----LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~t-H~~~~~~~~~d~v~~l 218 (241)
T cd03256 145 -----LSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSL-HQVDLAREYADRIVGL 218 (241)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998765567766655 5566788899999999
Q ss_pred eCCeEEEecChhhHH
Q 000517 418 AEGKIVYHGPQDHVL 432 (1449)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1449)
++|++++.|+++++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988763
No 260
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=328.70 Aligned_cols=203 Identities=21% Similarity=0.317 Sum_probs=167.8
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCC-CeeEEEEEEcCccCcc---ccccceEEEEccCCCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTS-GYVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSPNI 949 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~-~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~l 949 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+.+|+|.++|.+... ..+++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 4699999999999999999999999999999999997532 2358999999987542 234667999999988887 6
Q ss_pred CHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000517 950 TVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMD 1025 (1449)
Q Consensus 950 Tv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLD 1025 (1449)
|++||+.+....+.... .....++.++++++.++|.+ ..+.. ...||||||||++|||+|+.+|++|+||
T Consensus 94 tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLD 167 (246)
T PRK14269 94 SIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKLKQN-----ALALSGGQQQRLCIARALAIKPKLLLLD 167 (246)
T ss_pred cHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99999988654431101 12334456788999999953 23332 3479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1026 EPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1026 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|||+|||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 168 EP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 225 (246)
T PRK14269 168 EPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFH-LGELIEFGES 225 (246)
T ss_pred CCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEE-CCEEEEECCH
Confidence 99999999999999999999864 899999999986 4778899999998 5899999875
No 261
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=331.56 Aligned_cols=216 Identities=23% Similarity=0.362 Sum_probs=179.2
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|+++.++. +++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKP--QSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEec
Confidence 4677787765421 134699999999999999999999999999999999998654 489999999876
Q ss_pred cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000517 928 VQ---ETFARVSGYCEQTDI-HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLST 1003 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1003 (1449)
.. ..+++.+||++|++. .++.+||+||+.+..... ....+...+.++++++.++|.+..++.++ .|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEPQ-----NLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCcc-----cCCH
Confidence 42 235677999999974 567799999998864322 12234445678899999999887777754 7999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000517 1004 EQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIY 1082 (1449)
Q Consensus 1004 GqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~ 1082 (1449)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|+++. + ..+|++++|. +|+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~-~G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFS-EGKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEE-CCEEEE
Confidence 9999999999999999999999999999999999999999999766 5999999999863 4 4799999997 589999
Q ss_pred ecCCC
Q 000517 1083 CGPLG 1087 (1449)
Q Consensus 1083 ~G~~~ 1087 (1449)
.|+.+
T Consensus 223 ~g~~~ 227 (271)
T PRK13632 223 QGKPK 227 (271)
T ss_pred ecCHH
Confidence 98763
No 262
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.7e-34 Score=331.74 Aligned_cols=203 Identities=23% Similarity=0.336 Sum_probs=170.5
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccc------cccceEEEEccCC--CC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQE------TFARVSGYCEQTD--IH 945 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~------~~~~~~gyv~Q~d--~~ 945 (1449)
+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+.... .+++.++|++|++ .+
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 101 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKP--AQGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSAV 101 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEccccCHHHHHHHhhceEEEecChhhhc
Confidence 5699999999999999999999999999999999998654 589999999875321 2456799999996 46
Q ss_pred CCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 946 SPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 946 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
.+.+||+||+.+..... ........++.++++++.+||. +..+..+ ..||||||||++|||||+.+|++|+|
T Consensus 102 ~~~~tv~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~~LSgGe~qrv~laral~~~p~illL 174 (265)
T TIGR02769 102 NPRMTVRQIIGEPLRHL--TSLDESEQKARIAELLDMVGLRSEDADKLP-----RQLSGGQLQRINIARALAVKPKLIVL 174 (265)
T ss_pred CCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 67899999997754321 1122334456788999999996 5666654 37999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
||||+|||+.++..+.+.|++++++ |+|||+++|++. .+.+.+|++++|. +|++++.|+..
T Consensus 175 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~-~G~i~~~g~~~ 236 (265)
T TIGR02769 175 DEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMD-KGQIVEECDVA 236 (265)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEe-CCEEEEECCHH
Confidence 9999999999999999999999765 899999999986 5667899999997 58999999863
No 263
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=333.72 Aligned_cols=205 Identities=21% Similarity=0.310 Sum_probs=169.4
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC-------CCceEEEEcCCC--
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV-------PPKTSAYISQND-- 254 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d-- 254 (1449)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 35999999999999999999999999999999999999998 999999999875421 245799999985
Q ss_pred ccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC-ccccc
Q 000517 255 LHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD-VCADT 333 (1449)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt 333 (1449)
.+++ .||+||+.|+....+.. ..+ ....++++++.+||. +..++
T Consensus 97 ~l~~-~tv~e~i~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gL~~~~~~~ 141 (286)
T PRK13646 97 QLFE-DTVEREIIFGPKNFKMN----------LDE------------------------VKNYAHRLLMDLGFSRDVMSQ 141 (286)
T ss_pred ccch-hhHHHHHHhhHHHcCCC----------HHH------------------------HHHHHHHHHHHcCCChhhhhC
Confidence 3444 69999999875432110 000 011246688999996 56777
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.+.+ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++. |..+++.+++|+
T Consensus 142 ~~~~-----LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vt-H~~~~~~~~~dr 215 (286)
T PRK13646 142 SPFQ-----MSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVS-HDMNEVARYADE 215 (286)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEe-cCHHHHHHhCCE
Confidence 7655 9999999999999999999999999999999999999999999998765566766654 556788899999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
|++|++|++++.|+++++.
T Consensus 216 i~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 216 VIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999988764
No 264
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.5e-34 Score=319.72 Aligned_cols=198 Identities=25% Similarity=0.347 Sum_probs=168.0
Q ss_pred eeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-ccccceEEEEccCCCCCCCCCHHHH
Q 000517 876 LLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-ETFARVSGYCEQTDIHSPNITVEES 954 (1449)
Q Consensus 876 iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~e~ 954 (1449)
+++|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEP--ASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 45799999999999999999999999999999998765 48999999987532 2345679999999999999999999
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000517 955 VIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDAR 1034 (1449)
Q Consensus 955 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~ 1034 (1449)
+.+...... . .....++.++++++.++|.+..++.+. .||||||||++||++|+.+|++++|||||+|||+.
T Consensus 91 ~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRLPE-----QLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 987532211 1 112234567889999999887777653 79999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecC
Q 000517 1035 AAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGP 1085 (1449)
Q Consensus 1035 ~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~ 1085 (1449)
++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|. +|+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~-~g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVS-QGKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEE-CCeEEEecC
Confidence 999999999998764 899999999976 4667899999997 589998874
No 265
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.9e-34 Score=324.42 Aligned_cols=206 Identities=25% Similarity=0.377 Sum_probs=170.9
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC--CceEEEEcCCCccCCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP--PKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lT 261 (1449)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 35899999999999999999999999999999999999997 9999999987754321 247999999988889999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+||+.+.....+.. ..+ ....++.+++.+||++..++.+++
T Consensus 91 ~~~~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~---- 132 (236)
T TIGR03864 91 VRQNLRYHAALHGLS----------RAE------------------------ARERIAALLARLGLAERADDKVRE---- 132 (236)
T ss_pred HHHHHHHHHHhcCCC----------HHH------------------------HHHHHHHHHHHcCChhhhcCChhh----
Confidence 999998765432110 000 011245678899998888887765
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|+ .+++. .+|++++|++|+
T Consensus 133 -LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~-~~~~~-~~d~i~~l~~G~ 209 (236)
T TIGR03864 133 -LNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHL-VDEIE-ADDRLVVLHRGR 209 (236)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecC-hhhHh-hCCEEEEEeCCe
Confidence 999999999999999999999999999999999999999999999875456777776554 45564 599999999999
Q ss_pred EEEecChhhHHH
Q 000517 422 IVYHGPQDHVLA 433 (1449)
Q Consensus 422 iv~~G~~~~~~~ 433 (1449)
+++.|+.+++.+
T Consensus 210 i~~~~~~~~~~~ 221 (236)
T TIGR03864 210 VLADGAAAELRG 221 (236)
T ss_pred EEEeCCHHHHHH
Confidence 999999877753
No 266
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-34 Score=321.01 Aligned_cols=196 Identities=25% Similarity=0.410 Sum_probs=165.9
Q ss_pred ccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-------ccccceEEEEccCCC
Q 000517 872 RKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-------ETFARVSGYCEQTDI 944 (1449)
Q Consensus 872 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-------~~~~~~~gyv~Q~d~ 944 (1449)
+++.+ |+|+++++ |+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.
T Consensus 11 ~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~ 85 (214)
T cd03297 11 PDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKP--DGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYA 85 (214)
T ss_pred CCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEecccccchhhhhhHhhcEEEEecCCc
Confidence 34445 99999999 99999999999999999999998654 58999999976431 124567999999999
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 945 HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 945 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
+++.+|++||+.+..... .....++.++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|
T Consensus 86 ~~~~~t~~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llll 155 (214)
T cd03297 86 LFPHLNVRENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRYP-----AQLSGGEKQRVALARALAAQPELLLL 155 (214)
T ss_pred cCCCCCHHHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 888999999998764321 12334466889999999987767664 37999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|. +|+++..|
T Consensus 156 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g 214 (214)
T cd03297 156 DEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVME-DGRLQYIG 214 (214)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEE-CCEEEecC
Confidence 9999999999999999999999765 899999999986 4667899999998 58988765
No 267
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=328.78 Aligned_cols=215 Identities=22% Similarity=0.312 Sum_probs=173.5
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCC---CCCeeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRK---TSGYVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~---~~~~~~G~I~i~G 924 (1449)
.++++|+++.+ +.+.+|+|+|+++++||+++|+||||||||||+++|+|.. .+.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWY-------------GDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEE-------------CCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 35566766543 2346999999999999999999999999999999999952 2212479999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc----ccccccC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI----KDSLVGI 995 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~ 995 (1449)
.+... ...++.++|++|++.+++ .|+.||+.+....+.. ...+...+.++++++.++|.+. .+..
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 143 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLKES--- 143 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhhCC---
Confidence 87532 234567999999988876 6999999886543311 1123344567899999998642 3333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 144 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~ 219 (250)
T PRK14245 144 --AFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFY 219 (250)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEE
Confidence 34799999999999999999999999999999999999999999999985 5899999999986 5778899999997
Q ss_pred cCcEEEEecCC
Q 000517 1076 TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~gG~~v~~G~~ 1086 (1449)
+|++++.|+.
T Consensus 220 -~G~~~~~~~~ 229 (250)
T PRK14245 220 -MGEMVEYDDT 229 (250)
T ss_pred -CCEEEEECCH
Confidence 5899999986
No 268
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=295.26 Aligned_cols=206 Identities=25% Similarity=0.457 Sum_probs=180.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCCCHH
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTVR 263 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 263 (1449)
..+|+|+|+.|.+||.++++||||||||||||+++|..+|. .|+|.+||++++. |...-|.|+|++.++|.+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~g--PgaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEG--PGAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccC--CCccceeEeccCccchhhHHH
Confidence 46999999999999999999999999999999999999998 9999999998764 344569999999999999999
Q ss_pred HHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccC
Q 000517 264 ETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGI 343 (1449)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGl 343 (1449)
+|++|+.+++|.++.. |+ ..+.+.+...||++..+..+=. |
T Consensus 93 dNvafgL~l~Gi~k~~-------R~---------------------------~~a~q~l~~VgL~~~~~~~i~q-----L 133 (259)
T COG4525 93 DNVAFGLQLRGIEKAQ-------RR---------------------------EIAHQMLALVGLEGAEHKYIWQ-----L 133 (259)
T ss_pred HHHHHHHHhcCCCHHH-------HH---------------------------HHHHHHHHHhCcccccccceEe-----e
Confidence 9999999998875321 11 2346688999999888887765 9
Q ss_pred ChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeC--Ce
Q 000517 344 SGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAE--GK 421 (1449)
Q Consensus 344 SGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~--G~ 421 (1449)
||||||||.|||||..+|+.|+||||..+||.-++.++.+.|-++.+..++.+++ ++|..+|..-+++++++|+. |+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~ll-iTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQVLL-ITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEE-EeccHHHHHhhhheeEEecCCCce
Confidence 9999999999999999999999999999999999999999999988887777665 56788999999999999984 79
Q ss_pred EEEecChhhHHHH
Q 000517 422 IVYHGPQDHVLAF 434 (1449)
Q Consensus 422 iv~~G~~~~~~~~ 434 (1449)
|+..-+.+-...|
T Consensus 213 vv~~~~~df~rR~ 225 (259)
T COG4525 213 VVERLPLDFARRY 225 (259)
T ss_pred eeEecCCCHHHHh
Confidence 9988777654444
No 269
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-34 Score=331.63 Aligned_cols=204 Identities=26% Similarity=0.370 Sum_probs=171.6
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCC-ccCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQND-LHIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~l 260 (1449)
++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++ ..++.+
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~ 97 (279)
T PRK13635 21 YALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGA 97 (279)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccc
Confidence 5899999999999999999999999999999999999997 9999999998764322 45799999986 367788
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||+||+.++....+.. .++ ....++++++.+||.+..++.+++
T Consensus 98 tv~enl~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~--- 140 (279)
T PRK13635 98 TVQDDVAFGLENIGVP----------REE------------------------MVERVDQALRQVGMEDFLNREPHR--- 140 (279)
T ss_pred cHHHHHhhhHhhCCCC----------HHH------------------------HHHHHHHHHHHcCChhhhhCCccc---
Confidence 9999998865432210 000 011356788999999888888765
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++ +++. .+|+|++|++|
T Consensus 141 --LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~-~~~~-~~d~i~~l~~G 216 (279)
T PRK13635 141 --LSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDL-DEAA-QADRVIVMNKG 216 (279)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCH-HHHH-cCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999999765567777776654 4565 59999999999
Q ss_pred eEEEecChhhHH
Q 000517 421 KIVYHGPQDHVL 432 (1449)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1449)
++++.|+.+++.
T Consensus 217 ~i~~~g~~~~~~ 228 (279)
T PRK13635 217 EILEEGTPEEIF 228 (279)
T ss_pred EEEEECCHHHHh
Confidence 999999988775
No 270
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.2e-34 Score=324.19 Aligned_cols=203 Identities=30% Similarity=0.467 Sum_probs=170.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC--CCceEEEEcCCCccCCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV--PPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 261 (1449)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 45999999999999999999999999999999999999987 999999998875321 2456999999998888999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+||+.+.....+... .+ ....++++++.+||++..++.+++
T Consensus 92 v~~~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~---- 133 (220)
T cd03263 92 VREHLRFYARLKGLPK----------SE------------------------IKEEVELLLRVLGLTDKANKRART---- 133 (220)
T ss_pred HHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCHHHHhChhhh----
Confidence 9999988655432110 00 001245678899998888887765
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++. |..+++.+++|++++|++|+
T Consensus 134 -LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tii~~s-H~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 134 -LSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--GRSIILTT-HSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--CCEEEEEc-CCHHHHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999864 46666654 55567888999999999999
Q ss_pred EEEecChhhH
Q 000517 422 IVYHGPQDHV 431 (1449)
Q Consensus 422 iv~~G~~~~~ 431 (1449)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999987764
No 271
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-34 Score=330.43 Aligned_cols=216 Identities=24% Similarity=0.323 Sum_probs=178.9
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|+++.+.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKV--KSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 4677777765421 113589999999999999999999999999999999998664 589999999875
Q ss_pred cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000517 928 VQ---ETFARVSGYCEQTDI-HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLST 1003 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1003 (1449)
.. ...++.++|++|++. +++..|+.+|+.+..... ....+...+.++++++.+++.+..+..+ ..|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYEP-----NALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCCc-----ccCCH
Confidence 32 245667999999974 677889999998864322 1233444567889999999988777664 47999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000517 1004 EQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIY 1082 (1449)
Q Consensus 1004 GqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~ 1082 (1449)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++. .+|++++|. +|++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~-~G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMN-KGTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEE-CCEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 354 499999997 589999
Q ss_pred ecCCC
Q 000517 1083 CGPLG 1087 (1449)
Q Consensus 1083 ~G~~~ 1087 (1449)
.|+.+
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 99864
No 272
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=328.06 Aligned_cols=215 Identities=24% Similarity=0.319 Sum_probs=175.6
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCC--CC-eeEEEEEEcCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKT--SG-YVEGEIKISGY 925 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~I~i~G~ 925 (1449)
+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|.
T Consensus 5 l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~ 71 (252)
T PRK14256 5 VKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDT 71 (252)
T ss_pred EEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCE
Confidence 56677765442 2459999999999999999999999999999999999754 21 24799999998
Q ss_pred cCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000517 926 PKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGIP 996 (1449)
Q Consensus 926 ~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~ 996 (1449)
++.. ..+++.++|++|+..+++.+|+.||+.+...... .......++.++++++.+++.+ ..+..
T Consensus 72 ~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 145 (252)
T PRK14256 72 DIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLKSN---- 145 (252)
T ss_pred EcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhCC----
Confidence 7532 2356779999999999999999999987643321 1122334456788999999864 22332
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 997 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 997 ~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.
T Consensus 146 -~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~- 221 (252)
T PRK14256 146 -AMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFY- 221 (252)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEE-
Confidence 347999999999999999999999999999999999999999999999975 689999999986 5678899999997
Q ss_pred CcEEEEecCC
Q 000517 1077 GGRIIYCGPL 1086 (1449)
Q Consensus 1077 gG~~v~~G~~ 1086 (1449)
+|+++..|+.
T Consensus 222 ~G~i~~~~~~ 231 (252)
T PRK14256 222 MGDLVECGET 231 (252)
T ss_pred CCEEEEeCCH
Confidence 5899999986
No 273
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3.4e-34 Score=324.75 Aligned_cols=204 Identities=22% Similarity=0.369 Sum_probs=170.6
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC-----CCceEEEEcCCCccCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV-----PPKTSAYISQNDLHIAE 259 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~~~ 259 (1449)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 15 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (240)
T PRK09493 15 QVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPH 91 (240)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCCC
Confidence 5899999999999999999999999999999999999987 999999998875421 14579999999988999
Q ss_pred CCHHHHHHHHHHc-cCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 260 MTVRETVDFSARC-QGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 260 lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
+||+||+.++... .+.. ..+ ....++++++.+||++..|..+.+
T Consensus 92 ~tv~~~l~~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~- 136 (240)
T PRK09493 92 LTALENVMFGPLRVRGAS----------KEE------------------------AEKQARELLAKVGLAERAHHYPSE- 136 (240)
T ss_pred CcHHHHHHhHHHHhcCCC----------HHH------------------------HHHHHHHHHHHcCChHHHhcChhh-
Confidence 9999999886421 1100 000 011246688999998777777655
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++. |..+++.+++|++++|+
T Consensus 137 ----LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii~s-H~~~~~~~~~d~i~~l~ 210 (240)
T PRK09493 137 ----LSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-EGMTMVIVT-HEIGFAEKVASRLIFID 210 (240)
T ss_pred ----cCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-cCCEEEEEe-CCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999865 467776665 45667888999999999
Q ss_pred CCeEEEecChhhHH
Q 000517 419 EGKIVYHGPQDHVL 432 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1449)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~g~~~~~~ 224 (240)
T PRK09493 211 KGRIAEDGDPQVLI 224 (240)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999988764
No 274
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.6e-34 Score=344.18 Aligned_cols=194 Identities=26% Similarity=0.426 Sum_probs=169.4
Q ss_pred cceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-------ccccceEEEEccCCCCCCCCCH
Q 000517 879 DVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-------ETFARVSGYCEQTDIHSPNITV 951 (1449)
Q Consensus 879 ~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-------~~~~~~~gyv~Q~d~~~~~lTv 951 (1449)
|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRP--DEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 99999999999999999999999999999998665 58999999987532 1345679999999999999999
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000517 952 EESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGL 1031 (1449)
Q Consensus 952 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgL 1031 (1449)
+||+.|+.... .....++.++++++.++|.+..++.+. .||||||||++|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLPG-----RLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99999865321 123345568899999999988887754 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1032 DARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1032 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|+.++..+++.|++++++ |+|||++||+++ ++...+|++++|. +|+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~-~G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLE-DGRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEe-CCEEEEECCH
Confidence 999999999999999765 899999999986 5778899999997 5899999986
No 275
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-34 Score=323.99 Aligned_cols=201 Identities=27% Similarity=0.395 Sum_probs=173.1
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccc-cccceEEEEccCCCCCCCCCHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQE-TFARVSGYCEQTDIHSPNITVE 952 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~-~~~~~~gyv~Q~d~~~~~lTv~ 952 (1449)
+.+|+|+|++++|||+++|+|+||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|++..++.+|+.
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVF 90 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCcCChhhcceEEEecccccCCCCcHH
Confidence 4699999999999999999999999999999999998765 479999999875431 2346799999999988889999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000517 953 ESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLD 1032 (1449)
Q Consensus 953 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD 1032 (1449)
||+.+....+. .......+.++++++.+||.+..++.+ ..||+|||||++|||+|+.+|++++|||||+|||
T Consensus 91 ~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~gLD 162 (232)
T cd03300 91 ENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQRVAIARALVNEPKVLLLDEPLGALD 162 (232)
T ss_pred HHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99988654331 223344567889999999988777765 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1033 ARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1033 ~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|. +|++++.|+.
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~-~G~~~~~~~~ 215 (232)
T cd03300 163 LKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMN-KGKIQQIGTP 215 (232)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEecCCH
Confidence 99999999999999764 899999999985 4778899999998 5899998864
No 276
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=2.2e-34 Score=325.44 Aligned_cols=201 Identities=27% Similarity=0.427 Sum_probs=173.2
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccc-cccceEEEEccCCCCCCCCCHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQE-TFARVSGYCEQTDIHSPNITVE 952 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~-~~~~~~gyv~Q~d~~~~~lTv~ 952 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+.... ..++.++|++|++.+++..|+.
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQP--DSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 4699999999999999999999999999999999998654 589999999875431 2346799999999988899999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000517 953 ESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLD 1032 (1449)
Q Consensus 953 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD 1032 (1449)
||+.+....+. .......+.++++++.+++.+..++.++ .||+|||||++||++|+.+|++++|||||+|||
T Consensus 91 enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~lS~G~~qrl~laral~~~p~llllDEP~~~LD 162 (237)
T TIGR00968 91 DNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYPN-----QLSGGQRQRVALARALAVEPQVLLLDEPFGALD 162 (237)
T ss_pred HHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99987654331 2223344667899999999877777654 799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1033 ARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1033 ~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
+.+...+.+.|++++++ |+|||++||+++ ++.+.+|++++|. +|++++.|+.
T Consensus 163 ~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~-~g~i~~~~~~ 215 (237)
T TIGR00968 163 AKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMS-NGKIEQIGSP 215 (237)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEE-CCEEEEecCH
Confidence 99999999999998765 899999999986 5678899999997 5899999885
No 277
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.1e-35 Score=344.18 Aligned_cols=209 Identities=25% Similarity=0.431 Sum_probs=175.9
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
+++|+|+++++. +++++|+++||+|++||.+||+|+|||||||++++|.+... .+|+|.|||+++
T Consensus 351 ~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~di 415 (591)
T KOG0057|consen 351 SIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQDI 415 (591)
T ss_pred cEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCeeH
Confidence 589999998764 23459999999999999999999999999999999998654 489999999986
Q ss_pred c---cccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCC-------cccccccccCCC
Q 000517 928 V---QETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIEL-------DAIKDSLVGIPG 997 (1449)
Q Consensus 928 ~---~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L-------~~~~~~~vg~~~ 997 (1449)
. .+.+|+.+|||||+..+| +-||.+|+.|+ +++.+. +.|-++.+..++ .+-.+|.||..|
T Consensus 416 k~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YG-----n~sas~----eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG 485 (591)
T KOG0057|consen 416 KEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYG-----NPSASD----EEVVEACKRAGLHDVISRLPDGYQTLVGERG 485 (591)
T ss_pred hhhChHHhhhheeEeCCccccc-chhHHHHhhcC-----CCCcCH----HHHHHHHHHcCcHHHHHhccccchhhHhhcc
Confidence 4 357889999999988776 56999999885 233333 334445555554 344677888876
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
. .|||||||||+||||++.+|+|+++|||||.||..+...+++.+.+. ..|+|+|++.|+. +....||++++|+ +
T Consensus 486 ~-~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l~-n 560 (591)
T KOG0057|consen 486 L-MLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVLD-N 560 (591)
T ss_pred c-ccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEEE-C
Confidence 5 59999999999999999999999999999999999999999999984 4699999999986 4788999999998 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|++...|+-
T Consensus 561 G~v~e~gth 569 (591)
T KOG0057|consen 561 GTVKEYGTH 569 (591)
T ss_pred CeeEEeccH
Confidence 899999985
No 278
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=338.26 Aligned_cols=225 Identities=23% Similarity=0.279 Sum_probs=181.7
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
++.+|+++++....... ...+...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 6 l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l~ 80 (327)
T PRK11308 6 LQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDLL 80 (327)
T ss_pred EEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEcC
Confidence 66777776553211000 001235699999999999999999999999999999999998654 5899999998753
Q ss_pred c------ccccceEEEEccCC--CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-cccccccCCCCC
Q 000517 929 Q------ETFARVSGYCEQTD--IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-IKDSLVGIPGVN 999 (1449)
Q Consensus 929 ~------~~~~~~~gyv~Q~d--~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~ 999 (1449)
. ..+++.++||+|++ .+.|.+|+.+++....... ......+..+.+.++++.+||.+ ..++.+ .
T Consensus 81 ~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gL~~~~~~~~p-----~ 153 (327)
T PRK11308 81 KADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLIN--TSLSAAERREKALAMMAKVGLRPEHYDRYP-----H 153 (327)
T ss_pred cCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHc--cCCCHHHHHHHHHHHHHHCCCChHHhcCCC-----c
Confidence 2 13466799999997 5788999999997754432 12334455678899999999963 556553 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000517 1000 GLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGG 1078 (1449)
Q Consensus 1000 ~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG 1078 (1449)
.||||||||++|||||+.+|++|++||||+|||..++..|++.|+++.++ |.|||++||+++ .+.+.+|++++|. +|
T Consensus 154 ~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~-~G 231 (327)
T PRK11308 154 MFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMY-LG 231 (327)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEE-CC
Confidence 79999999999999999999999999999999999999999999999764 999999999976 4667899999998 58
Q ss_pred EEEEecCCC
Q 000517 1079 RIIYCGPLG 1087 (1449)
Q Consensus 1079 ~~v~~G~~~ 1087 (1449)
++++.|+..
T Consensus 232 ~ive~g~~~ 240 (327)
T PRK11308 232 RCVEKGTKE 240 (327)
T ss_pred EEEEECCHH
Confidence 999999864
No 279
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-34 Score=332.28 Aligned_cols=219 Identities=23% Similarity=0.310 Sum_probs=179.2
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|+++.++... ....+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~i~g~~i~ 75 (280)
T PRK13633 5 IKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIP--SEGKVYVDGLDTS 75 (280)
T ss_pred EEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEecc
Confidence 66777777653110 00124699999999999999999999999999999999998664 5899999998764
Q ss_pred c----ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000517 929 Q----ETFARVSGYCEQTDI-HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLST 1003 (1449)
Q Consensus 929 ~----~~~~~~~gyv~Q~d~-~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1003 (1449)
. ...++.+||++|++. .+...||.|++.|..... .....+.++.++++++.+||.+..++.++ .|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~LS~ 147 (280)
T PRK13633 76 DEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAPH-----LLSG 147 (280)
T ss_pred ccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCcc-----cCCH
Confidence 2 234678999999974 233569999998875432 22334455678999999999988887754 7999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000517 1004 EQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIY 1082 (1449)
Q Consensus 1004 GqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~ 1082 (1449)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++. +. .+|++++|+ +|++++
T Consensus 148 G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~-~~-~~d~v~~l~-~G~i~~ 224 (280)
T PRK13633 148 GQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEE-AV-EADRIIVMD-SGKVVM 224 (280)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHH-Hh-cCCEEEEEE-CCEEEE
Confidence 9999999999999999999999999999999999999999999764 9999999999873 44 499999997 589999
Q ss_pred ecCCC
Q 000517 1083 CGPLG 1087 (1449)
Q Consensus 1083 ~G~~~ 1087 (1449)
.|+..
T Consensus 225 ~g~~~ 229 (280)
T PRK13633 225 EGTPK 229 (280)
T ss_pred ecCHH
Confidence 99863
No 280
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=330.66 Aligned_cols=216 Identities=24% Similarity=0.311 Sum_probs=175.8
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 924 (1449)
.+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 577888876542 245999999999999999999999999999999999976431 2589999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGI 995 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 995 (1449)
.+... ..+++.++|++|++.+++. ||.||+.+....+.. ........+.++++++.++|.+ ..+..
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 160 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHEP--- 160 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhCC---
Confidence 87532 2345679999999888774 999999987543321 1122334566889999999964 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ .+...+|++++|.
T Consensus 161 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~ 236 (267)
T PRK14235 161 --GTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFH 236 (267)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEE
Confidence 347999999999999999999999999999999999999999999999865 789999999986 4667899999997
Q ss_pred cCcEEEEecCC
Q 000517 1076 TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~gG~~v~~G~~ 1086 (1449)
+|+++..|+.
T Consensus 237 -~G~i~~~g~~ 246 (267)
T PRK14235 237 -LGNLVEVGDT 246 (267)
T ss_pred -CCEEEEeCCH
Confidence 5899999875
No 281
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=332.29 Aligned_cols=217 Identities=24% Similarity=0.335 Sum_probs=179.2
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCe-eEEEEEEcCcc
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGY-VEGEIKISGYP 926 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~-~~G~I~i~G~~ 926 (1449)
.++++|+++.++. ..+.+|+|||++|++||++||+||||||||||+++|+|...+.. .+|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4667777765421 12359999999999999999999999999999999999865421 13999999987
Q ss_pred Ccc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCC
Q 000517 927 KVQ---ETFARVSGYCEQTDI-HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLS 1002 (1449)
Q Consensus 927 ~~~---~~~~~~~gyv~Q~d~-~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1002 (1449)
... ...++.+||++|++. .++..||+||+.|....+ ....++.++.++++++.++|.+..++.+ +.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCC
Confidence 642 234567999999974 567899999998764322 2334455567899999999988777765 4799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEE
Q 000517 1003 TEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRII 1081 (1449)
Q Consensus 1003 gGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v 1081 (1449)
||||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++. + ..+|++++|. +|+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~-~G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLD-DGKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEE-CCEEE
Confidence 99999999999999999999999999999999999999999999764 8999999999863 4 5799999997 58999
Q ss_pred EecCC
Q 000517 1082 YCGPL 1086 (1449)
Q Consensus 1082 ~~G~~ 1086 (1449)
+.|++
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99986
No 282
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=334.63 Aligned_cols=204 Identities=23% Similarity=0.364 Sum_probs=168.7
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCC-----------------------
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEF----------------------- 241 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~----------------------- 241 (1449)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+....
T Consensus 21 ~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (305)
T PRK13651 21 KALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKI 97 (305)
T ss_pred cceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceeccccccccccccccccccccccccccc
Confidence 5899999999999999999999999999999999999997 89999998754210
Q ss_pred ----CCCceEEEEcCCC-ccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhh
Q 000517 242 ----VPPKTSAYISQND-LHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTL 316 (1449)
Q Consensus 242 ----~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~ 316 (1449)
..++.++||+|++ ..+...||+||+.|+....+... .+ ...
T Consensus 98 ~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~----------~~------------------------~~~ 143 (305)
T PRK13651 98 KKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK----------EE------------------------AKK 143 (305)
T ss_pred chHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH----------HH------------------------HHH
Confidence 1145689999985 34556899999998765332110 00 011
Q ss_pred hHHHHHHHhCCC-ccccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcE
Q 000517 317 QTDYILKILGLD-VCADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDST 395 (1449)
Q Consensus 317 ~~~~il~~lgL~-~~~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t 395 (1449)
.++.+++.+||+ +..++.+.+ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .+.|
T Consensus 144 ~~~~~l~~~gL~~~~~~~~~~~-----LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~t 217 (305)
T PRK13651 144 RAAKYIELVGLDESYLQRSPFE-----LSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-QGKT 217 (305)
T ss_pred HHHHHHHHcCCChhhhhCChhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCCE
Confidence 356688999996 567777765 999999999999999999999999999999999999999999999874 4667
Q ss_pred EEEEEecCchhHHhhcCeEEEEeCCeEEEecChhhHH
Q 000517 396 ALISLLQPAPETFDLFDDIILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 396 ~vi~~~q~~~~~~~~fD~v~lL~~G~iv~~G~~~~~~ 432 (1449)
+|++ +|..+++.+.+|+|++|++|++++.|+++++.
T Consensus 218 iiiv-tHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 218 IILV-THDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred EEEE-eeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 6665 56677888999999999999999999998874
No 283
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=331.75 Aligned_cols=208 Identities=25% Similarity=0.388 Sum_probs=170.9
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC------eeEEEEEEcCccCcc---ccccceEEEEccCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG------YVEGEIKISGYPKVQ---ETFARVSGYCEQTD 943 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~------~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d 943 (1449)
++.+|+|+|++|++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+... ..+++.++|++|++
T Consensus 13 ~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~ 92 (272)
T PRK13547 13 HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAA 92 (272)
T ss_pred CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccC
Confidence 346999999999999999999999999999999999976542 127999999987532 23456689999998
Q ss_pred CCCCCCCHHHHHHHHHHhccC-CCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHh------
Q 000517 944 IHSPNITVEESVIFSAWLRLA-PEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELV------ 1016 (1449)
Q Consensus 944 ~~~~~lTv~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~------ 1016 (1449)
..++.+|++||+.+....... .........+.++++++.++|.+..++.+ ..||||||||++||++|+
T Consensus 93 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~~~~~ 167 (272)
T PRK13547 93 QPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRDV-----TTLSGGELARVQFARVLAQLWPPH 167 (272)
T ss_pred CCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcccccc
Confidence 766679999999875321110 01111234466889999999987777654 379999999999999999
Q ss_pred ---hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1017 ---ANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1017 ---~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
.+|++|+|||||+|||+.+...+.+.|++++++ |+|||+++|+++ ++.+.+|++++|. +|++++.|+.+
T Consensus 168 ~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~d~i~~l~-~G~i~~~g~~~ 240 (272)
T PRK13547 168 DAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHADRIAMLA-DGAIVAHGAPA 240 (272)
T ss_pred ccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEE-CCeEEEecCHH
Confidence 599999999999999999999999999999765 899999999986 5677899999998 58999999864
No 284
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=4.7e-34 Score=335.97 Aligned_cols=225 Identities=21% Similarity=0.326 Sum_probs=180.1
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC-eeEEEEEEcCcc
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG-YVEGEIKISGYP 926 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~I~i~G~~ 926 (1449)
.+.++|++.++... .+...+|+||||+|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 35677776554321 12346999999999999999999999999999999999986542 138999999987
Q ss_pred Ccc---cc---cc-ceEEEEccCC--CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCC
Q 000517 927 KVQ---ET---FA-RVSGYCEQTD--IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPG 997 (1449)
Q Consensus 927 ~~~---~~---~~-~~~gyv~Q~d--~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 997 (1449)
+.. .. ++ +.++||+|++ .+.|.+|+.+++.+...... ....++..+++.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 532 11 22 4799999998 67899999999987654322 233445567788999999997533221 1 12
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
+.+||||||||++||+||+.+|++|++||||+|||+.++..+++.|+++.++ |.|+|++|||++ .+.+.+|++++|.
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~- 236 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMY- 236 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEE-
Confidence 4589999999999999999999999999999999999999999999999765 899999999986 4667899999997
Q ss_pred CcEEEEecCCC
Q 000517 1077 GGRIIYCGPLG 1087 (1449)
Q Consensus 1077 gG~~v~~G~~~ 1087 (1449)
+|++++.|+..
T Consensus 237 ~G~ive~g~~~ 247 (330)
T PRK09473 237 AGRTMEYGNAR 247 (330)
T ss_pred CCEEEEECCHH
Confidence 58999999863
No 285
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.5e-34 Score=324.96 Aligned_cols=203 Identities=25% Similarity=0.382 Sum_probs=166.2
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCC-----CCCCCeeeEEEECCccCCCCC-----CCceEEEEcCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNL-----DPSLKVTGEVSYNGYKLEEFV-----PPKTSAYISQND 254 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l-----~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d 254 (1449)
++|+|+|+++++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|+++.... .++.++|++|++
T Consensus 14 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 14 HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 5899999999999999999999999999999999999 776 999999998875432 245799999998
Q ss_pred ccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccc
Q 000517 255 LHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTM 334 (1449)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 334 (1449)
.++ .+||+||+.++....+.... .+ .+..++.+++.+||.+..+..
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~~~~~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~ 136 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHGIKLK---------EE------------------------LDERVEEALRKAALWDEVKDR 136 (227)
T ss_pred hhc-cccHHHHHHhHHHhcCCCcH---------HH------------------------HHHHHHHHHHHcCCChHHhcc
Confidence 877 89999999987543221000 00 011245678999998766665
Q ss_pred ccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeE
Q 000517 335 VGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDI 414 (1449)
Q Consensus 335 vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v 414 (1449)
+. .+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. .|+|++ +|..+++.++||++
T Consensus 137 ~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~tii~~-sH~~~~~~~~~d~i 210 (227)
T cd03260 137 LH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE--YTIVIV-THNMQQAARVADRT 210 (227)
T ss_pred CC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC--cEEEEE-eccHHHHHHhCCEE
Confidence 30 1349999999999999999999999999999999999999999999998653 566655 45567888999999
Q ss_pred EEEeCCeEEEecChhh
Q 000517 415 ILMAEGKIVYHGPQDH 430 (1449)
Q Consensus 415 ~lL~~G~iv~~G~~~~ 430 (1449)
++|++|++++.|++++
T Consensus 211 ~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 211 AFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEeCCEEEEecCccc
Confidence 9999999999998764
No 286
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=325.13 Aligned_cols=197 Identities=23% Similarity=0.337 Sum_probs=168.0
Q ss_pred cceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccc-cccceEEEEccCCCCCCCCCHHHHHHH
Q 000517 879 DVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQE-TFARVSGYCEQTDIHSPNITVEESVIF 957 (1449)
Q Consensus 879 ~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~-~~~~~~gyv~Q~d~~~~~lTv~e~l~f 957 (1449)
|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.... ..++.++|++|++.+++.+|+.||+.+
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~ 94 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTP--ASGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGL 94 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhc
Confidence 89999999999999999999999999999998654 589999999875321 224579999999999999999999987
Q ss_pred HHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000517 958 SAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAA 1037 (1449)
Q Consensus 958 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~ 1037 (1449)
..... .. ..+..++.++++++.+||.+..++.+. .||||||||++||++++.+|++++|||||+|||+.++.
T Consensus 95 ~~~~~--~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~ 166 (232)
T PRK10771 95 GLNPG--LK-LNAAQREKLHAIARQMGIEDLLARLPG-----QLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQ 166 (232)
T ss_pred ccccc--cC-CCHHHHHHHHHHHHHcCcHHHHhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHH
Confidence 53211 11 122345668999999999888887754 79999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1038 IVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1038 ~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
.+.+.|++++++ |+|||+++|++. ++.+.+|++++|. +|++++.|+.+
T Consensus 167 ~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~g~i~~~g~~~ 215 (232)
T PRK10771 167 EMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVA-DGRIAWDGPTD 215 (232)
T ss_pred HHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEeCCHH
Confidence 999999998764 899999999986 5677899999998 58999999863
No 287
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-34 Score=334.89 Aligned_cols=216 Identities=20% Similarity=0.370 Sum_probs=172.5
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCC-------------------CCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEF-------------------VPP 244 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-------------------~~~ 244 (1449)
.++|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|+++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35999999999999999999999999999999999999997 99999999876532 114
Q ss_pred ceEEEEcCCC--ccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHH
Q 000517 245 KTSAYISQND--LHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYIL 322 (1449)
Q Consensus 245 ~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il 322 (1449)
+.++||+|++ .++ ..||+||+.|+....+.. ..+ ....++.++
T Consensus 116 ~~ig~v~Q~~~~~l~-~~tv~eni~~~~~~~~~~----------~~~------------------------~~~~~~~~l 160 (320)
T PRK13631 116 RRVSMVFQFPEYQLF-KDTIEKDIMFGPVALGVK----------KSE------------------------AKKLAKFYL 160 (320)
T ss_pred hcEEEEEECchhccc-cchHHHHHHhhHHhcCCC----------HHH------------------------HHHHHHHHH
Confidence 5799999986 345 469999998875322110 000 011345678
Q ss_pred HHhCCC-ccccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEe
Q 000517 323 KILGLD-VCADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLL 401 (1449)
Q Consensus 323 ~~lgL~-~~~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~ 401 (1449)
+.+||+ ...++.+.+ |||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.. .+.|+|++.
T Consensus 161 ~~~gL~~~~~~~~~~~-----LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~g~Tiiivt- 233 (320)
T PRK13631 161 NKMGLDDSYLERSPFG-----LSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-NNKTVFVIT- 233 (320)
T ss_pred HHcCCChhHhcCCccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEe-
Confidence 999996 456666554 999999999999999999999999999999999999999999999865 467766654
Q ss_pred cCchhHHhhcCeEEEEeCCeEEEecChhhHHH---HHHhcCCCCCC
Q 000517 402 QPAPETFDLFDDIILMAEGKIVYHGPQDHVLA---FFEDCGFRCPE 444 (1449)
Q Consensus 402 q~~~~~~~~fD~v~lL~~G~iv~~G~~~~~~~---~F~~~Gf~~p~ 444 (1449)
|..+++.+.+|+|++|++|+++..|+++++.. .++..|..+|.
T Consensus 234 Hd~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 234 HTMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred cCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 55667889999999999999999999987742 34445555443
No 288
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-34 Score=329.68 Aligned_cols=214 Identities=21% Similarity=0.276 Sum_probs=173.8
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 924 (1449)
.+.++|++++++ .+.+|+|+||+|++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 13 ~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g 79 (269)
T PRK14259 13 IISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDG 79 (269)
T ss_pred eEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 477888876542 246999999999999999999999999999999999975421 3589999999
Q ss_pred ccCc-----cccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccC
Q 000517 925 YPKV-----QETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGI 995 (1449)
Q Consensus 925 ~~~~-----~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 995 (1449)
.+.. ...+++.++|++|++.+++ .||+||+.+....+. .. ...++.++++++.+++.. ..+..
T Consensus 80 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 151 (269)
T PRK14259 80 TDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YT-GDMDELVERSLRKAAVWDECKDKLNES--- 151 (269)
T ss_pred EEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---Cc-HHHHHHHHHHHHHhCCcchhhhhhCCC---
Confidence 8652 1234567999999998887 499999988754331 11 223456778888888742 33433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++...+|++++|.
T Consensus 152 --~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 227 (269)
T PRK14259 152 --GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFFN 227 (269)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEe
Confidence 347999999999999999999999999999999999999999999999854 799999999986 5778999999998
Q ss_pred c----------CcEEEEecCC
Q 000517 1076 T----------GGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~----------gG~~v~~G~~ 1086 (1449)
+ .|++++.|++
T Consensus 228 ~~~~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 228 AEEVEGGSGGKVGYLVEFNET 248 (269)
T ss_pred ccccccccccccceEEEeCCH
Confidence 5 3678999986
No 289
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.8e-34 Score=324.19 Aligned_cols=201 Identities=24% Similarity=0.326 Sum_probs=166.6
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCC--CCCceEEEEc-CCCccCCC
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEF--VPPKTSAYIS-QNDLHIAE 259 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~~ 259 (1449)
.+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|++.... ..++.++|++ |++.+++.
T Consensus 33 ~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 356999999999999999999999999999999999999997 99999999875332 1245789997 55677889
Q ss_pred CCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccc
Q 000517 260 MTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAM 339 (1449)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 339 (1449)
+||+||+.+.....+... .+ ....++.+++.+||++..|+.+++
T Consensus 110 ~tv~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~-- 153 (236)
T cd03267 110 LPVIDSFYLLAAIYDLPP----------AR------------------------FKKRLDELSELLDLEELLDTPVRQ-- 153 (236)
T ss_pred CcHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCChhHhcCChhh--
Confidence 999999988654332110 00 011245678889999888888776
Q ss_pred cccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeC
Q 000517 340 RRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAE 419 (1449)
Q Consensus 340 ~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~ 419 (1449)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.| ..+++.+++|++++|.+
T Consensus 154 ---LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH-~~~~~~~~~d~i~~l~~ 229 (236)
T cd03267 154 ---LSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRERGTTVLLTSH-YMKDIEALARRVLVIDK 229 (236)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEEec-CHHHHHHhCCEEEEEeC
Confidence 99999999999999999999999999999999999999999999987655677777654 45678899999999999
Q ss_pred CeEEEec
Q 000517 420 GKIVYHG 426 (1449)
Q Consensus 420 G~iv~~G 426 (1449)
|++++.|
T Consensus 230 G~i~~~g 236 (236)
T cd03267 230 GRLLYDG 236 (236)
T ss_pred CEEEecC
Confidence 9998765
No 290
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-34 Score=327.41 Aligned_cols=221 Identities=22% Similarity=0.255 Sum_probs=177.9
Q ss_pred CcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCC---CeeEEEEEE
Q 000517 846 PLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTS---GYVEGEIKI 922 (1449)
Q Consensus 846 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~I~i 922 (1449)
...+.++|++++++ .+.+|+|+|+++++||++||+|+||||||||+++|+|...+ .+.+|+|.+
T Consensus 18 ~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 84 (267)
T PRK14237 18 EIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILY 84 (267)
T ss_pred CeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEE
Confidence 34578888877542 24699999999999999999999999999999999997643 135899999
Q ss_pred cCccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCC
Q 000517 923 SGYPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPG 997 (1449)
Q Consensus 923 ~G~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 997 (1449)
+|.+... ...++.++|++|++.+++ .||+||+.+..... .....+..++.+.++++.++|.+..+...+. .
T Consensus 85 ~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~-~ 160 (267)
T PRK14237 85 RGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLHK-S 160 (267)
T ss_pred CCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhcC-C
Confidence 9987532 134667999999988877 69999998864322 1112334456788899999985322122221 2
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++. ++.|||++||+++ ++.+.+|++++|. +
T Consensus 161 ~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l~-~ 237 (267)
T PRK14237 161 ALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFFY-L 237 (267)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEEE-C
Confidence 35799999999999999999999999999999999999999999999985 4799999999986 5778899999997 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|++++.|+.
T Consensus 238 G~i~~~g~~ 246 (267)
T PRK14237 238 GDLIEYDKT 246 (267)
T ss_pred CEEEEeCCH
Confidence 899999986
No 291
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=334.61 Aligned_cols=219 Identities=19% Similarity=0.313 Sum_probs=175.9
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|++++++... .....+|+|+|++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIIS--ETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEc
Confidence 367778776653110 0013499999999999999999999999999999999998654 589999999864
Q ss_pred c--------cccccceEEEEccCCCC-CCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000517 928 V--------QETFARVSGYCEQTDIH-SPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPG 997 (1449)
Q Consensus 928 ~--------~~~~~~~~gyv~Q~d~~-~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 997 (1449)
. ...+++.++|++|++.. ....|++||+.|..... ....+...+.++++++.++|. +..++.+
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~~---- 148 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRSP---- 148 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCCh----
Confidence 2 12345679999999732 23469999998864322 122334446678899999994 5666654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
..||||||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.+|++++|+
T Consensus 149 -~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~- 225 (289)
T PRK13645 149 -FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMH- 225 (289)
T ss_pred -hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEE-
Confidence 379999999999999999999999999999999999999999999998764 899999999986 5778899999998
Q ss_pred CcEEEEecCC
Q 000517 1077 GGRIIYCGPL 1086 (1449)
Q Consensus 1077 gG~~v~~G~~ 1086 (1449)
+|++++.|+.
T Consensus 226 ~G~i~~~g~~ 235 (289)
T PRK13645 226 EGKVISIGSP 235 (289)
T ss_pred CCEEEEeCCH
Confidence 5899998875
No 292
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=342.20 Aligned_cols=191 Identities=24% Similarity=0.417 Sum_probs=168.0
Q ss_pred cceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-------ccccceEEEEccCCCCCCCCCH
Q 000517 879 DVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-------ETFARVSGYCEQTDIHSPNITV 951 (1449)
Q Consensus 879 ~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-------~~~~~~~gyv~Q~d~~~~~lTv 951 (1449)
|+|+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.+... ...++.+||++|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRP--QKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 89999999999999999999999999999998665 58999999987532 1245679999999999999999
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000517 952 EESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGL 1031 (1449)
Q Consensus 952 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgL 1031 (1449)
+||+.|+.. ....+.++++++.+||.+..++.++ .||||||||++|||||+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYPG-----SLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCcc-----cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 1123568899999999888877754 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1032 DARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1032 D~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
|+.++..+++.|++++++ |+|+|++||+++ ++...+|++++|. +|+++..|++.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~-~G~i~~~g~~~ 214 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLE-QGKVKAFGPLE 214 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEe-CCEEEEecCHH
Confidence 999999999999999765 899999999986 6788899999998 58999999864
No 293
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=6.3e-33 Score=358.28 Aligned_cols=123 Identities=26% Similarity=0.371 Sum_probs=102.8
Q ss_pred CCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhCC---CEEE
Q 000517 948 NITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-IKDSLVGIPGVNGLSTEQRKRLTIAVELVANP---SIIF 1023 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p---~ill 1023 (1449)
++||.|++.|...+. . .....+.++.+||.. ..+..+ ..||||||||+.||++|+.+| ++++
T Consensus 791 ~ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~~-----~tLSgGEkQRl~LAraL~~~p~~~~llI 856 (943)
T PRK00349 791 DMTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQPA-----TTLSGGEAQRVKLAKELSKRSTGKTLYI 856 (943)
T ss_pred cCcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCCc-----ccCCHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 378999988865432 1 122457899999976 345554 379999999999999999999 9999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe-----cCcEEEEecCC
Q 000517 1024 MDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK-----TGGRIIYCGPL 1086 (1449)
Q Consensus 1024 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~-----~gG~~v~~G~~ 1086 (1449)
|||||+|||+.+...+++.|+++.+.|.|||+++|++. ....+|+++.|. ++|++++.|++
T Consensus 857 LDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 857 LDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 346899999994 47999999986
No 294
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-35 Score=372.68 Aligned_cols=219 Identities=28% Similarity=0.437 Sum_probs=182.0
Q ss_pred ccCCCcEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEE
Q 000517 842 LPFEPLTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIK 921 (1449)
Q Consensus 842 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~ 921 (1449)
+......++|+|++|+++..+ +..+|+|+|+.|++|+.+||+|||||||||++++|.+...| .+|+|.
T Consensus 344 ~~~~~g~ief~nV~FsYPsRp----------dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP--~~G~V~ 411 (1228)
T KOG0055|consen 344 LSSIKGEIEFRNVCFSYPSRP----------DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDP--TSGEVL 411 (1228)
T ss_pred ccccccceEEEEEEecCCCCC----------cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCC--CCceEE
Confidence 333455799999999988654 34699999999999999999999999999999999997665 689999
Q ss_pred EcCccCcc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHH-------cCCcccccc
Q 000517 922 ISGYPKVQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLET-------IELDAIKDS 991 (1449)
Q Consensus 922 i~G~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~-------l~L~~~~~~ 991 (1449)
+||.++.. +.+|.++|.|.|+|.+| +.|++||+.|+ .++.+.++ ++++.+. ..|.+-.++
T Consensus 412 idG~di~~~~~~~lr~~iglV~QePvlF-~~tI~eNI~~G-----~~dat~~~----i~~a~k~ana~~fi~~lp~g~~T 481 (1228)
T KOG0055|consen 412 IDGEDIRNLNLKWLRSQIGLVSQEPVLF-ATTIRENIRYG-----KPDATREE----IEEAAKAANAHDFILKLPDGYDT 481 (1228)
T ss_pred EcCccchhcchHHHHhhcCeeeechhhh-cccHHHHHhcC-----CCcccHHH----HHHHHHHccHHHHHHhhHHhhcc
Confidence 99988643 56788999999999775 58999999885 22222222 2233222 245566789
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeE
Q 000517 992 LVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDEL 1071 (1449)
Q Consensus 992 ~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~ 1071 (1449)
.+|..|+ +||||||||++|||||+++|+||+||||||+||+.+.+.|+++|++.. .|+|.|+++|+.| ..+.+|++
T Consensus 482 ~vge~g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~-~grTTivVaHRLS--tIrnaD~I 557 (1228)
T KOG0055|consen 482 LVGERGV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS-KGRTTIVVAHRLS--TIRNADKI 557 (1228)
T ss_pred cccCCCC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh-cCCeEEEEeeehh--hhhccCEE
Confidence 9998877 499999999999999999999999999999999999999999999864 6999999999986 34569999
Q ss_pred EEEecCcEEEEecCCC
Q 000517 1072 ILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1072 ~~l~~gG~~v~~G~~~ 1087 (1449)
+++. +|++++.|..+
T Consensus 558 ~v~~-~G~IvE~G~h~ 572 (1228)
T KOG0055|consen 558 AVME-EGKIVEQGTHD 572 (1228)
T ss_pred EEEE-CCEEEEecCHH
Confidence 9998 58999999863
No 295
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-34 Score=336.21 Aligned_cols=223 Identities=17% Similarity=0.235 Sum_probs=176.3
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCC--CeeEEEEEEcCcc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTS--GYVEGEIKISGYP 926 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~~~~G~I~i~G~~ 926 (1449)
+.++|++.+++.. .+...+|+||||+|++||++||+|+||||||||+++|+|...+ ...+|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 5667776554321 1235699999999999999999999999999999999997642 1357999999987
Q ss_pred Ccc---cc----ccceEEEEccCCC--CCCCCCHHHHHHHHHHhccCCC---CChHHHHHHHHHHHHHcCCccc---ccc
Q 000517 927 KVQ---ET----FARVSGYCEQTDI--HSPNITVEESVIFSAWLRLAPE---INSKTKAEFVNEVLETIELDAI---KDS 991 (1449)
Q Consensus 927 ~~~---~~----~~~~~gyv~Q~d~--~~~~lTv~e~l~f~~~lr~~~~---~~~~~~~~~v~~~l~~l~L~~~---~~~ 991 (1449)
+.. .. .++.++||+|++. +.|.+||.+++.+......... ....+.++.+.++++.+||.+. .+.
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~ 154 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS 154 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC
Confidence 532 11 2347999999975 5788999999976422111000 1112345678899999999753 344
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCe
Q 000517 992 LVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDE 1070 (1449)
Q Consensus 992 ~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~ 1070 (1449)
. +.+|||||||||+||+||+.+|+||+|||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|+
T Consensus 155 ~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dr 228 (330)
T PRK15093 155 F-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADK 228 (330)
T ss_pred C-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 3 3479999999999999999999999999999999999999999999999864 999999999986 46788999
Q ss_pred EEEEecCcEEEEecCCC
Q 000517 1071 LILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1071 ~~~l~~gG~~v~~G~~~ 1087 (1449)
+++|. +|++++.|+.+
T Consensus 229 i~vm~-~G~ive~g~~~ 244 (330)
T PRK15093 229 INVLY-CGQTVETAPSK 244 (330)
T ss_pred EEEEE-CCEEEEECCHH
Confidence 99997 58999999863
No 296
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=326.92 Aligned_cols=208 Identities=24% Similarity=0.346 Sum_probs=172.9
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|+++++ +++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 4 l~~~~l~~~~-------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 68 (241)
T PRK14250 4 IEFKEVSYSS-------------FGKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDP--TEGSILIDGVDIK 68 (241)
T ss_pred EEEEeEEEEe-------------CCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEhh
Confidence 5667776654 234599999999999999999999999999999999997654 5899999998753
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHH
Q 000517 929 Q---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 929 ~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgG 1004 (1449)
. ...++.++|++|++.+++ .|++||+.+....+ . ...+.++++++.++|. +..++.+ ..||||
T Consensus 69 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~----~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~G 135 (241)
T PRK14250 69 TIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G----EKNVDVEYYLSIVGLNKEYATRDV-----KNLSGG 135 (241)
T ss_pred hcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C----cHHHHHHHHHHHcCCCHHHhhCCc-----ccCCHH
Confidence 2 234567999999988776 69999998653321 1 1134578899999996 4555543 479999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYC 1083 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~ 1083 (1449)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|. +|+++..
T Consensus 136 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~-~G~i~~~ 213 (241)
T PRK14250 136 EAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLN-KGILVEY 213 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEe-CCEEEEe
Confidence 999999999999999999999999999999999999999999764 999999999986 4677899999998 5899998
Q ss_pred cCC
Q 000517 1084 GPL 1086 (1449)
Q Consensus 1084 G~~ 1086 (1449)
|++
T Consensus 214 ~~~ 216 (241)
T PRK14250 214 AKT 216 (241)
T ss_pred CCH
Confidence 875
No 297
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2e-34 Score=327.44 Aligned_cols=213 Identities=22% Similarity=0.332 Sum_probs=170.6
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC------CCceEEEEcCCCccC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV------PPKTSAYISQNDLHI 257 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1449)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 35999999999999999999999999999999999999987 999999998875432 145699999999889
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGN 337 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 337 (1449)
+.+||+||+.++......... ... ..... ..+..++.+++.+||.+..++.+.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~~-~~~-~~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~ 145 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYKPTWR-SLL-GRFSE------------------------EDKERALSALERVGLADKAYQRADQ 145 (243)
T ss_pred ccccHHHHHhhcccccccchh-hhh-ccccH------------------------HHHHHHHHHHHHcCcHhhhcCCccc
Confidence 999999999875321000000 000 00000 0012346678999998777777655
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++. |..+++.++||++++|
T Consensus 146 -----LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~t-H~~~~~~~~~d~v~~l 219 (243)
T TIGR02315 146 -----LSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINL-HQVDLAKKYADRIVGL 219 (243)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEe-CCHHHHHHhcCeEEEE
Confidence 9999999999999999999999999999999999999999999998764466766655 5566788999999999
Q ss_pred eCCeEEEecChhhH
Q 000517 418 AEGKIVYHGPQDHV 431 (1449)
Q Consensus 418 ~~G~iv~~G~~~~~ 431 (1449)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999988765
No 298
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-34 Score=322.81 Aligned_cols=199 Identities=25% Similarity=0.399 Sum_probs=171.6
Q ss_pred eeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-ccccceEEEEccCCCCCCCCCHHHH
Q 000517 876 LLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-ETFARVSGYCEQTDIHSPNITVEES 954 (1449)
Q Consensus 876 iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~e~ 954 (1449)
+|+|+|++|+|||+++|+|+||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p--~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKP--DSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 79999999999999999999999999999999998665 58999999987543 1234679999999999999999999
Q ss_pred HHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000517 955 VIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDAR 1034 (1449)
Q Consensus 955 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~ 1034 (1449)
+.+..... ........+.+.++++.++|.+..++.+. .||||||||++||++|+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKPE-----TLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCcc-----cCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 12233445567889999999887777754 79999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1035 AAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1035 ~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|. +|++++.|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIML-NGKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEecCH
Confidence 999999999998764 999999999985 4677899999997 5899999875
No 299
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.1e-34 Score=322.69 Aligned_cols=201 Identities=28% Similarity=0.356 Sum_probs=163.7
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC------CCceEEEEcCCC--cc
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV------PPKTSAYISQND--LH 256 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 256 (1449)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 5899999999999999999999999999999999999987 999999999876532 245799999997 46
Q ss_pred CCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC-ccccccc
Q 000517 257 IAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD-VCADTMV 335 (1449)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~v 335 (1449)
++.+||+||+.+.....+..... + . .+...+.+++.+||. ...++.+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~~---------~------------~-----------~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSKK---------E------------A-----------RKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcHH---------H------------H-----------HHHHHHHHHHHCCCChhHhhCCc
Confidence 67899999998865432211000 0 0 000123578888985 5667766
Q ss_pred cccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEE
Q 000517 336 GNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDII 415 (1449)
Q Consensus 336 g~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~ 415 (1449)
++ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++..++|+|++.| ..+++.+++|+++
T Consensus 144 ~~-----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH-~~~~~~~~~d~i~ 217 (228)
T cd03257 144 HE-----LSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITH-DLGVVAKIADRVA 217 (228)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeC-CHHHHHHhcCeEE
Confidence 65 99999999999999999999999999999999999999999999987644677777655 4567888999999
Q ss_pred EEeCCeEEEec
Q 000517 416 LMAEGKIVYHG 426 (1449)
Q Consensus 416 lL~~G~iv~~G 426 (1449)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 300
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=5.9e-34 Score=324.91 Aligned_cols=205 Identities=23% Similarity=0.373 Sum_probs=170.4
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCC-----------CCCceEEEEcCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEF-----------VPPKTSAYISQN 253 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-----------~~~~~~~yv~Q~ 253 (1449)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 5899999999999999999999999999999999999987 99999999887532 113578999999
Q ss_pred CccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccc
Q 000517 254 DLHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADT 333 (1449)
Q Consensus 254 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 333 (1449)
+.+++.+||+||+.++..... +.. ..+ ....++.+++.+||++..|+
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~-~~~--------~~~------------------------~~~~~~~~l~~~gl~~~~~~ 140 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVK-GEP--------KEE------------------------ATARARELLAKVGLAGKETS 140 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhc-CCC--------HHH------------------------HHHHHHHHHHHcCCcchhhC
Confidence 988999999999988543110 000 000 01124567889999887777
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.+++ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .+.|+|++ +|..+++.+++|+
T Consensus 141 ~~~~-----LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~~-tH~~~~~~~~~d~ 213 (250)
T PRK11264 141 YPRR-----LSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-EKRTMVIV-THEMSFARDVADR 213 (250)
T ss_pred Chhh-----CChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-cCCEEEEE-eCCHHHHHHhcCE
Confidence 7665 999999999999999999999999999999999999999999999875 36676665 5566788899999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
+++|++|++++.|+.+++.
T Consensus 214 i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 214 AIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999988763
No 301
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-34 Score=325.11 Aligned_cols=200 Identities=24% Similarity=0.404 Sum_probs=167.7
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCCCHHH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTVRE 264 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 264 (1449)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ...++|++|++.+++.+||+|
T Consensus 15 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~e 89 (255)
T PRK11248 15 PALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQD 89 (255)
T ss_pred eeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHHH
Confidence 5899999999999999999999999999999999999987 99999999887542 345899999998889999999
Q ss_pred HHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCC
Q 000517 265 TVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGIS 344 (1449)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlS 344 (1449)
|+.+.....+.. ..+ ....++.+++.+||++..++.+++ ||
T Consensus 90 ~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~-----LS 130 (255)
T PRK11248 90 NVAFGLQLAGVE----------KMQ------------------------RLEIAHQMLKKVGLEGAEKRYIWQ-----LS 130 (255)
T ss_pred HHHhHHHHcCCC----------HHH------------------------HHHHHHHHHHHcCChhHhhCChhh-----CC
Confidence 998865432110 000 011246688999998877777765 99
Q ss_pred hhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe--CCeE
Q 000517 345 GGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA--EGKI 422 (1449)
Q Consensus 345 GGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~--~G~i 422 (1449)
|||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++. |...++.++||+|++|+ +|++
T Consensus 131 gGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivs-H~~~~~~~~~d~i~~l~~~~G~i 209 (255)
T PRK11248 131 GGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLIT-HDIEEAVFMATELVLLSPGPGRV 209 (255)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEeCCCcEE
Confidence 99999999999999999999999999999999999999999998654466766654 55678889999999998 5999
Q ss_pred EEecChh
Q 000517 423 VYHGPQD 429 (1449)
Q Consensus 423 v~~G~~~ 429 (1449)
+..++.+
T Consensus 210 ~~~~~~~ 216 (255)
T PRK11248 210 VERLPLN 216 (255)
T ss_pred EEEecCC
Confidence 9888653
No 302
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-34 Score=329.07 Aligned_cols=205 Identities=27% Similarity=0.364 Sum_probs=170.1
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC---CCceEEEEcCCCc-cCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV---PPKTSAYISQNDL-HIAE 259 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 259 (1449)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999999987 999999999875432 2457999999963 6778
Q ss_pred CCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccc
Q 000517 260 MTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAM 339 (1449)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 339 (1449)
+||+||+.++....+.. . .+ ....++++++.+||.+..++.+++
T Consensus 99 ~tv~enl~~~~~~~~~~-~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-- 142 (271)
T PRK13632 99 ATVEDDIAFGLENKKVP-P---------KK------------------------MKDIIDDLAKKVGMEDYLDKEPQN-- 142 (271)
T ss_pred ccHHHHHHhHHHHcCCC-H---------HH------------------------HHHHHHHHHHHcCCHHHhhCCccc--
Confidence 99999998865322110 0 00 011346688999998888887765
Q ss_pred cccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeC
Q 000517 340 RRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAE 419 (1449)
Q Consensus 340 ~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~ 419 (1449)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++++..++|+|++.|++ +++ ..+|++++|++
T Consensus 143 ---LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~-~~~-~~~d~v~~l~~ 217 (271)
T PRK13632 143 ---LSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDM-DEA-ILADKVIVFSE 217 (271)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEech-hHH-hhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999998764457777776665 455 47999999999
Q ss_pred CeEEEecChhhHH
Q 000517 420 GKIVYHGPQDHVL 432 (1449)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1449)
|+++..|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999987764
No 303
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.9e-34 Score=329.96 Aligned_cols=223 Identities=19% Similarity=0.278 Sum_probs=178.5
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|+++++..+.+ ....+.+.+|+|+|++|++||+++|+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEP--TSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 667888776531100 0001124699999999999999999999999999999999998765 5899999998753
Q ss_pred c---ccccceEEEEccCCC--CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCC
Q 000517 929 Q---ETFARVSGYCEQTDI--HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLS 1002 (1449)
Q Consensus 929 ~---~~~~~~~gyv~Q~d~--~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LS 1002 (1449)
. ...++.++|++|++. +.+.+|+.|++.+...... ........+.++++++.++|. +..+..+ ..||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYYP-----HMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcCc-----hhcC
Confidence 2 123456999999875 5678899999988654432 122334456788999999994 5555553 3799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEE
Q 000517 1003 TEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRII 1081 (1449)
Q Consensus 1003 gGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v 1081 (1449)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|. +|+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~-~G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMH-QGEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEE-CCEEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 5777899999997 58999
Q ss_pred EecCC
Q 000517 1082 YCGPL 1086 (1449)
Q Consensus 1082 ~~G~~ 1086 (1449)
+.|+.
T Consensus 230 ~~~~~ 234 (267)
T PRK15112 230 ERGST 234 (267)
T ss_pred ecCCH
Confidence 98875
No 304
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-34 Score=325.95 Aligned_cols=194 Identities=26% Similarity=0.367 Sum_probs=165.5
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCCCHHH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTVRE 264 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 264 (1449)
.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 5899999999999999999999999999999999999987 9999999976543 2457999999998889899999
Q ss_pred HHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCC
Q 000517 265 TVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGIS 344 (1449)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlS 344 (1449)
|+.+... .. . +..++.+++.+||.+..+..+++ ||
T Consensus 101 nl~~~~~-----~~--------~---------------------------~~~~~~~l~~~gl~~~~~~~~~~-----LS 135 (257)
T PRK11247 101 NVGLGLK-----GQ--------W---------------------------RDAALQALAAVGLADRANEWPAA-----LS 135 (257)
T ss_pred HHHhccc-----ch--------H---------------------------HHHHHHHHHHcCChhHhcCChhh-----CC
Confidence 9987421 00 0 01235678899998877777765 99
Q ss_pred hhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEE
Q 000517 345 GGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVY 424 (1449)
Q Consensus 345 GGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~ 424 (1449)
|||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+..++|+|++. |...++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivs-Hd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVT-HDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEe-CCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999999999999999999999999999998765567776654 55667888999999999999999
Q ss_pred ecChh
Q 000517 425 HGPQD 429 (1449)
Q Consensus 425 ~G~~~ 429 (1449)
+|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88754
No 305
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.1e-34 Score=336.29 Aligned_cols=208 Identities=25% Similarity=0.302 Sum_probs=173.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC------CCceEEEEcCCC--c
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV------PPKTSAYISQND--L 255 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~ 255 (1449)
..+|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.+.. .++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 46999999999999999999999999999999999999987 999999999876543 145799999997 5
Q ss_pred cCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC-cccccc
Q 000517 256 HIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD-VCADTM 334 (1449)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 334 (1449)
++|.+||.||+.+..+...... .+++ .+..++.+++.+||. ...++.
T Consensus 111 l~p~~tv~~~i~~~l~~~~~~~--------~~~~------------------------~~~~~~~~l~~vgl~~~~~~~~ 158 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHPKL--------SRQE------------------------VKDRVKAMMLKVGLLPNLINRY 158 (331)
T ss_pred cCCCCCHHHHHHHHHHHhccCC--------CHHH------------------------HHHHHHHHHHHcCCChHHhcCC
Confidence 8889999999998654321100 0000 011345688999994 456776
Q ss_pred ccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeE
Q 000517 335 VGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDI 414 (1449)
Q Consensus 335 vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v 414 (1449)
+.+ |||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+..+.|+|+ ++|+...+.+++|+|
T Consensus 159 p~~-----LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~-iTHdl~~~~~~~dri 232 (331)
T PRK15079 159 PHE-----FSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIF-IAHDLAVVKHISDRV 232 (331)
T ss_pred ccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEE-EeCCHHHHHHhCCEE
Confidence 655 99999999999999999999999999999999999999999999997654566555 567788898999999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000517 415 ILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~ 432 (1449)
++|.+|++++.|+.+++.
T Consensus 233 ~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 233 LVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999998875
No 306
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.9e-34 Score=322.09 Aligned_cols=198 Identities=28% Similarity=0.459 Sum_probs=166.6
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC--CCceEEEEcCCCccCCCCCH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV--PPKTSAYISQNDLHIAEMTV 262 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 262 (1449)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 5999999999999999999999999999999999999987 999999998875321 24579999999988999999
Q ss_pred HHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccccc
Q 000517 263 RETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRG 342 (1449)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 342 (1449)
+||+.+.....+... .+ ....++++++.+||++..++.+++
T Consensus 96 ~e~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 136 (218)
T cd03266 96 RENLEYFAGLYGLKG----------DE------------------------LTARLEELADRLGMEELLDRRVGG----- 136 (218)
T ss_pred HHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCHHHHhhhhhh-----
Confidence 999988654322100 00 011346688999998888887765
Q ss_pred CChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeE
Q 000517 343 ISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKI 422 (1449)
Q Consensus 343 lSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~i 422 (1449)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++. |..+++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~t-H~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-LGKCILFST-HIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999865 466766665 455688899999999999999
Q ss_pred EEec
Q 000517 423 VYHG 426 (1449)
Q Consensus 423 v~~G 426 (1449)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 307
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.1e-34 Score=318.55 Aligned_cols=192 Identities=27% Similarity=0.358 Sum_probs=161.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCc-cCCCCCH
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDL-HIAEMTV 262 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 262 (1449)
.++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 35999999999999999999999999999999999999997 9999999988754333457999999864 3557899
Q ss_pred HHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccccc
Q 000517 263 RETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRG 342 (1449)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 342 (1449)
+||+.+.....+ . ....++++++.+||.+..++.+++
T Consensus 90 ~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 126 (205)
T cd03226 90 REELLLGLKELD--A------------------------------------GNEQAETVLKDLDLYALKERHPLS----- 126 (205)
T ss_pred HHHHhhhhhhcC--c------------------------------------cHHHHHHHHHHcCCchhcCCCchh-----
Confidence 999987543210 0 001245678999999888888765
Q ss_pred CChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeE
Q 000517 343 ISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKI 422 (1449)
Q Consensus 343 lSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~i 422 (1449)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++. |..+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~s-H~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-QGKAVIVIT-HDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999865 467777665 455678889999999999997
Q ss_pred E
Q 000517 423 V 423 (1449)
Q Consensus 423 v 423 (1449)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 308
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-34 Score=326.47 Aligned_cols=207 Identities=23% Similarity=0.338 Sum_probs=167.1
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCC--C-eeEEEEEEcCccCcc-----ccccceEEEEccCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTS--G-YVEGEIKISGYPKVQ-----ETFARVSGYCEQTDIH 945 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~I~i~G~~~~~-----~~~~~~~gyv~Q~d~~ 945 (1449)
+.+|+|+||+|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|.+... ..+++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 4699999999999999999999999999999999997542 1 258999999987532 1346679999999888
Q ss_pred CCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000517 946 SPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMD 1025 (1449)
Q Consensus 946 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLD 1025 (1449)
++. |+.||+.+....+.. .......++.++++++.++|.+........ .+..||||||||++|||+|+.+|++|+||
T Consensus 98 ~~~-tv~~ni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~Gq~qrv~laral~~~p~llllD 174 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGL-AKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFELSGGQQQRLCIARAIAVKPTMLLMD 174 (251)
T ss_pred ccC-CHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHcCCCchhhhHhhc-ChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 875 999999886433211 112233445678899999986522111111 13479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1026 EPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1026 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|+ +|++++.|+.
T Consensus 175 EPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 232 (251)
T PRK14244 175 EPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQ-SGRIVEYNTT 232 (251)
T ss_pred CCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999985 4899999999986 5677899999998 5899998875
No 309
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4e-34 Score=322.13 Aligned_cols=201 Identities=27% Similarity=0.360 Sum_probs=167.3
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 260 (1449)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (230)
T TIGR03410 14 HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRL 90 (230)
T ss_pred EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCC
Confidence 5999999999999999999999999999999999999997 9999999988754322 34699999999999999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhC-CCccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILG-LDVCADTMVGNAM 339 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lg-L~~~~dt~vg~~~ 339 (1449)
||+||+.++....+.. . ....+.+++.++ +.+..++.+++
T Consensus 91 tv~~~l~~~~~~~~~~----------~---------------------------~~~~~~~l~~~~~l~~~~~~~~~~-- 131 (230)
T TIGR03410 91 TVEENLLTGLAALPRR----------S---------------------------RKIPDEIYELFPVLKEMLGRRGGD-- 131 (230)
T ss_pred cHHHHHHHHHHhcCcc----------h---------------------------HHHHHHHHHHHHhHHHHhhCChhh--
Confidence 9999998865432100 0 001244566665 55556666655
Q ss_pred cccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeC
Q 000517 340 RRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAE 419 (1449)
Q Consensus 340 ~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~ 419 (1449)
||||||||++||++|+.+|++++|||||+|||+.++.++.+.|+++++..+.|+|++. |..+++.+++|+|++|++
T Consensus 132 ---LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~s-H~~~~~~~~~d~v~~l~~ 207 (230)
T TIGR03410 132 ---LSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVE-QYLDFARELADRYYVMER 207 (230)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEe-CCHHHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999998764466776665 556688889999999999
Q ss_pred CeEEEecChhhH
Q 000517 420 GKIVYHGPQDHV 431 (1449)
Q Consensus 420 G~iv~~G~~~~~ 431 (1449)
|+++..|+.+++
T Consensus 208 g~i~~~~~~~~~ 219 (230)
T TIGR03410 208 GRVVASGAGDEL 219 (230)
T ss_pred CEEEEECCHHHc
Confidence 999999998776
No 310
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=4.4e-34 Score=321.60 Aligned_cols=201 Identities=27% Similarity=0.363 Sum_probs=167.0
Q ss_pred eeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC--eeEEEEEEcCccCccccc-cceEEEEccCCC--CCCCCC
Q 000517 876 LLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG--YVEGEIKISGYPKVQETF-ARVSGYCEQTDI--HSPNIT 950 (1449)
Q Consensus 876 iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~--~~~G~I~i~G~~~~~~~~-~~~~gyv~Q~d~--~~~~lT 950 (1449)
+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+...... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 578999999999999999999999999999999976541 148999999987643222 357999999974 557789
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc---ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000517 951 VEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD---AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1027 (1449)
Q Consensus 951 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~---~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEP 1027 (1449)
+.|++.+...... . .....++.++++++.++|. +..+..+ ..|||||||||+|||+|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG--K-LSKQARALILEALEAVGLPDPEEVLKKYP-----FQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC--c-cHHHHHHHHHHHHHHcCCCchHHHHhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543321 1 1233456789999999997 3455554 37999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1028 TTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1028 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|+|||+.+...+.+.|++++++ |+|||+++|+++ ++...+|++++|. +|+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMD-DGRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEeCCH
Confidence 9999999999999999999764 899999999986 5777899999997 5899998875
No 311
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.3e-34 Score=370.29 Aligned_cols=209 Identities=27% Similarity=0.408 Sum_probs=175.3
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++|+|+++... +++.+|+|+|++|+|||++||+||||||||||+++|+|.. + .+|+|.+||.+.
T Consensus 349 ~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~i 413 (588)
T PRK11174 349 TIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIEL 413 (588)
T ss_pred eEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEec
Confidence 588999986432 1246999999999999999999999999999999999987 5 489999999875
Q ss_pred c---cccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000517 928 V---QETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-------IKDSLVGIPG 997 (1449)
Q Consensus 928 ~---~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 997 (1449)
. ...+++.++||+|++.++. .|++||+.++. ++.+ ++.++++++..++.+ -.|+.+|..|
T Consensus 414 ~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~----~eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 414 RELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDAS----DEQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred ccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCC----HHHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 4 3567889999999998875 59999998741 2222 244566666666543 4578888766
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
. .||||||||++|||||+++|+||+||||||+||+.+++.|++.|+++. +++|+|+++|+++ ....+|++++|+ +
T Consensus 484 ~-~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~-~ 558 (588)
T PRK11174 484 A-GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQ-D 558 (588)
T ss_pred C-CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEe-C
Confidence 4 599999999999999999999999999999999999999999999875 5899999999985 567899999997 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|++++.|+.
T Consensus 559 G~i~e~G~~ 567 (588)
T PRK11174 559 GQIVQQGDY 567 (588)
T ss_pred CeEeecCCH
Confidence 899999974
No 312
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-34 Score=317.18 Aligned_cols=202 Identities=25% Similarity=0.341 Sum_probs=181.8
Q ss_pred eeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-------ccccceEEEEccCCCCCC
Q 000517 875 RLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-------ETFARVSGYCEQTDIHSP 947 (1449)
Q Consensus 875 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-------~~~~~~~gyv~Q~d~~~~ 947 (1449)
.-++|+|++|+.||++.|||-||||||||+++|.+...+ +.|+|.++|.++.. +-.++.++.|+|+-.++|
T Consensus 42 vGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiep--t~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlP 119 (386)
T COG4175 42 VGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEP--TRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALLP 119 (386)
T ss_pred EeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCC--CCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcccc
Confidence 357899999999999999999999999999999998765 68999999987532 123467999999999999
Q ss_pred CCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000517 948 NITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1027 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEP 1027 (1449)
+.||.||..|+..++ .++++++++++.+.|+.+||..+.+..+ ++||||+||||.+||||+.+|+||+||||
T Consensus 120 hrtVl~Nv~fGLev~---Gv~~~er~~~a~~~l~~VgL~~~~~~yp-----~eLSGGMqQRVGLARAla~~~~IlLMDEa 191 (386)
T COG4175 120 HRTVLENVAFGLEVQ---GVPKAEREERALEALELVGLEGYADKYP-----NELSGGMQQRVGLARALANDPDILLMDEA 191 (386)
T ss_pred chhHhhhhhcceeec---CCCHHHHHHHHHHHHHHcCchhhhhcCc-----ccccchHHHHHHHHHHHccCCCEEEecCc
Confidence 999999999998776 4567889999999999999999999885 48999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1028 TTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1028 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
.|.|||--+..+++-|.++.++ ++|||++|||.+ |.+..-||+.+|+ +|+++..|++++
T Consensus 192 FSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~e 251 (386)
T COG4175 192 FSALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPEE 251 (386)
T ss_pred hhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHHH
Confidence 9999999999999999888654 899999999987 6889999999997 699999999853
No 313
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-34 Score=330.08 Aligned_cols=206 Identities=26% Similarity=0.373 Sum_probs=171.4
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCC--C---CCCceEEEEcCCCc-cCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEE--F---VPPKTSAYISQNDL-HIA 258 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~~ 258 (1449)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+.
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 96 (283)
T PRK13636 20 HALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLF 96 (283)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhc
Confidence 5899999999999999999999999999999999999987 9999999998741 1 12357999999863 345
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
..||+||+.++....+.. ..+ ....++++++.+||.+..|+.+++
T Consensus 97 ~~tv~e~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~- 141 (283)
T PRK13636 97 SASVYQDVSFGAVNLKLP----------EDE------------------------VRKRVDNALKRTGIEHLKDKPTHC- 141 (283)
T ss_pred cccHHHHHHhHHHHcCCC----------HHH------------------------HHHHHHHHHHHCCChhhhhCCccc-
Confidence 689999998865432110 000 011356788999999888888766
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++..+.|++++ +|..+++.++||++++|+
T Consensus 142 ----LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillv-sH~~~~~~~~~dri~~l~ 216 (283)
T PRK13636 142 ----LSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIA-THDIDIVPLYCDNVFVMK 216 (283)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEE-ecCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999976546777766 455677888999999999
Q ss_pred CCeEEEecChhhHHH
Q 000517 419 EGKIVYHGPQDHVLA 433 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1449)
+|++++.|+.+++..
T Consensus 217 ~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 217 EGRVILQGNPKEVFA 231 (283)
T ss_pred CCEEEEeCCHHHHhc
Confidence 999999999988753
No 314
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-34 Score=325.55 Aligned_cols=215 Identities=22% Similarity=0.276 Sum_probs=174.5
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISGY 925 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G~ 925 (1449)
+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 5 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~ 71 (251)
T PRK14270 5 MESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGK 71 (251)
T ss_pred EEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCE
Confidence 56677765432 246999999999999999999999999999999999975431 25799999998
Q ss_pred cCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000517 926 PKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGIP 996 (1449)
Q Consensus 926 ~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~ 996 (1449)
+... ...++.+||++|++.+++ .|++||+.|....... .......+.++++++.++|.+ ..+..
T Consensus 72 ~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 144 (251)
T PRK14270 72 NIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLKKS---- 144 (251)
T ss_pred ecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhhCC----
Confidence 7532 134567999999998887 8999999886543211 122344456788999998742 23333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 997 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 997 ~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
...||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|.
T Consensus 145 -~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~- 220 (251)
T PRK14270 145 -ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL- 220 (251)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE-
Confidence 347999999999999999999999999999999999999999999999876 689999999986 5778899999997
Q ss_pred CcEEEEecCCC
Q 000517 1077 GGRIIYCGPLG 1087 (1449)
Q Consensus 1077 gG~~v~~G~~~ 1087 (1449)
+|++++.|+.+
T Consensus 221 ~G~i~~~~~~~ 231 (251)
T PRK14270 221 MGDLIEFNKTE 231 (251)
T ss_pred CCeEEEeCCHH
Confidence 58999999863
No 315
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-34 Score=333.54 Aligned_cols=222 Identities=22% Similarity=0.276 Sum_probs=177.7
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCC---CeeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTS---GYVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~I~i~G 924 (1449)
.+.++|+++++.. +...+|+|+|++|++||++||+|+||||||||+++|+|.... .+.+|+|.+||
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 4678888776531 124599999999999999999999999999999999997532 13479999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVN 999 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 999 (1449)
.++.. ..+++.++||+|++.+++ .|++||+.|+..... ....+..++.++++++.++|.+..++.++.. ..
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~--~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~-~~ 224 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNG--INDRKILEKIVEKSLKSAALWDEVKDDLDKA-GN 224 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcC--CChHHHHHHHHHHHHHHcCCcchhhhhhhCC-cc
Confidence 98642 245678999999998774 799999998643221 1112223345788899988854334444443 34
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000517 1000 GLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGR 1079 (1449)
Q Consensus 1000 ~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~ 1079 (1449)
.||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||++||++. .+.+.+|++++|+ +|+
T Consensus 225 ~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~-~G~ 301 (329)
T PRK14257 225 ALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFY-QGW 301 (329)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEE-CCE
Confidence 7999999999999999999999999999999999999999999999875 799999999986 4667799999998 589
Q ss_pred EEEecCCC
Q 000517 1080 IIYCGPLG 1087 (1449)
Q Consensus 1080 ~v~~G~~~ 1087 (1449)
+++.|++.
T Consensus 302 i~e~g~~~ 309 (329)
T PRK14257 302 IEEAGETK 309 (329)
T ss_pred EEEeCCHH
Confidence 99999873
No 316
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=6.1e-34 Score=318.11 Aligned_cols=208 Identities=19% Similarity=0.292 Sum_probs=155.2
Q ss_pred cEEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc
Q 000517 847 LTVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYP 926 (1449)
Q Consensus 847 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~ 926 (1449)
-.+..+|++|.++ +.+.++++++|-|.--..+||+||||.||||||++|.|...| ..|+..-|
T Consensus 585 PvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKn--- 647 (807)
T KOG0066|consen 585 PVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKN--- 647 (807)
T ss_pred CeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhcc---
Confidence 3466777777553 346789999999999999999999999999999999998776 46665322
Q ss_pred CccccccceEEEEccCC--CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000517 927 KVQETFARVSGYCEQTD--IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 927 ~~~~~~~~~~gyv~Q~d--~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1004 (1449)
.+-.+|+..|+. .+...-|.-|.|.-.. ..+. +.....|-.+||...++++- +..||||
T Consensus 648 -----hrL~iG~FdQh~~E~L~~Eetp~EyLqr~F------Nlpy----q~ARK~LG~fGL~sHAHTik----ikdLSGG 708 (807)
T KOG0066|consen 648 -----HRLRIGWFDQHANEALNGEETPVEYLQRKF------NLPY----QEARKQLGTFGLASHAHTIK----IKDLSGG 708 (807)
T ss_pred -----ceeeeechhhhhHHhhccccCHHHHHHHhc------CCCh----HHHHHHhhhhhhhhccceEe----eeecCCc
Confidence 234689888864 3344556666654211 1122 23456788999998888863 4579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
||-||++|.--++.|+||||||||++||..+...+-++|++. ...||+++||-.. +.+.-|.+.++.+.|----.|
T Consensus 709 QKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eIdG 784 (807)
T KOG0066|consen 709 QKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEIDG 784 (807)
T ss_pred chHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhccc
Confidence 999999999999999999999999999999999999999886 5679999999764 556667888887665444455
Q ss_pred CCCCChhHHH
Q 000517 1085 PLGKHSSQVI 1094 (1449)
Q Consensus 1085 ~~~~~~~~~~ 1094 (1449)
..++...+++
T Consensus 785 dFeDYkkEVL 794 (807)
T KOG0066|consen 785 DFEDYKKEVL 794 (807)
T ss_pred cHHHHHHHHH
Confidence 5543333333
No 317
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=327.18 Aligned_cols=215 Identities=22% Similarity=0.324 Sum_probs=174.6
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCC--CC-eeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKT--SG-YVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~I~i~G 924 (1449)
.+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|... +. ..+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 367777776542 2459999999999999999999999999999999999754 21 1479999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGI 995 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 995 (1449)
.+... ...++.+||++|++.+++. |++||+.+....+. ....++..+.++++++.+++.+ ..++.
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~~--- 152 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHTQ--- 152 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhCC---
Confidence 87531 2345679999999888875 99999988643321 1122334456788899999853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
..+||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 153 --~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 228 (259)
T PRK14274 153 --ALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFY 228 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 347999999999999999999999999999999999999999999999865 799999999986 5778899999997
Q ss_pred cCcEEEEecCC
Q 000517 1076 TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~gG~~v~~G~~ 1086 (1449)
+|+++..|++
T Consensus 229 -~G~i~~~g~~ 238 (259)
T PRK14274 229 -MGELVECNDT 238 (259)
T ss_pred -CCEEEEECCH
Confidence 5899999986
No 318
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-34 Score=318.00 Aligned_cols=196 Identities=29% Similarity=0.482 Sum_probs=164.5
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC--CCceEEEEcCCCccCCCCCH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV--PPKTSAYISQNDLHIAEMTV 262 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 262 (1449)
++|+|+|+.+++| +++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 14 RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 5899999999999 99999999999999999999999997 999999998775422 24578999999999999999
Q ss_pred HHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccccc
Q 000517 263 RETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRG 342 (1449)
Q Consensus 263 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rG 342 (1449)
+||+.+.....+... .+ ....++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~----- 130 (211)
T cd03264 90 REFLDYIAWLKGIPS----------KE------------------------VKARVDEVLELVNLGDRAKKKIGS----- 130 (211)
T ss_pred HHHHHHHHHHhCCCH----------HH------------------------HHHHHHHHHHHCCCHHHHhCchhh-----
Confidence 999988654322100 00 011245678899998877887765
Q ss_pred CChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeE
Q 000517 343 ISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKI 422 (1449)
Q Consensus 343 lSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~i 422 (1449)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++ +|..+++.+++|++++|++|++
T Consensus 131 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~v-sH~~~~~~~~~d~i~~l~~g~i 207 (211)
T cd03264 131 LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--DRIVILS-THIVEDVESLCNQVAVLNKGKL 207 (211)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--CCEEEEE-cCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999864 4565554 5666778889999999999999
Q ss_pred EEec
Q 000517 423 VYHG 426 (1449)
Q Consensus 423 v~~G 426 (1449)
++.|
T Consensus 208 ~~~g 211 (211)
T cd03264 208 VFEG 211 (211)
T ss_pred EecC
Confidence 8765
No 319
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3e-34 Score=321.17 Aligned_cols=196 Identities=24% Similarity=0.372 Sum_probs=162.5
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-------CceEEEEcCCCcc
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-------PKTSAYISQNDLH 256 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 256 (1449)
.++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 45999999999999999999999999999999999999987 9999999998765332 1469999999888
Q ss_pred CCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccc
Q 000517 257 IAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVG 336 (1449)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 336 (1449)
++.+||+||+.+........ ..+ ....++.+++.+||++..++.++
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~ 140 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKS----------VKE------------------------AKERAYEMLEKVGLEHRINHRPS 140 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCC----------HHH------------------------HHHHHHHHHHHcCChhhhhCChh
Confidence 88999999998865422110 000 01124567889999877777776
Q ss_pred ccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEE
Q 000517 337 NAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIIL 416 (1449)
Q Consensus 337 ~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~l 416 (1449)
. |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++ +.+|++++
T Consensus 141 ~-----LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~-~~~-~~~d~v~~ 213 (221)
T TIGR02211 141 E-----LSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDL-ELA-KKLDRVLE 213 (221)
T ss_pred h-----CCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHH-hhcCEEEE
Confidence 5 9999999999999999999999999999999999999999999998765567877776554 455 45799999
Q ss_pred EeCCeEE
Q 000517 417 MAEGKIV 423 (1449)
Q Consensus 417 L~~G~iv 423 (1449)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 320
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=6.8e-34 Score=318.33 Aligned_cols=197 Identities=26% Similarity=0.367 Sum_probs=163.3
Q ss_pred cccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCC
Q 000517 867 RGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHS 946 (1449)
Q Consensus 867 ~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~ 946 (1449)
....++++.+|+|+||+|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+...+.
T Consensus 28 ~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~---------~~~~~~~~ 96 (224)
T cd03220 28 RKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPP--DSGTVTVRGRVSSL---------LGLGGGFN 96 (224)
T ss_pred hhhhcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEchh---------hcccccCC
Confidence 34455667899999999999999999999999999999999997654 58999999976421 11123345
Q ss_pred CCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000517 947 PNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1026 (1449)
Q Consensus 947 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDE 1026 (1449)
+.+||+||+.+....+. ......++.++++++.++|.+..++.++ .||||||||++|||+|+.+|++|+|||
T Consensus 97 ~~~tv~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG~~qrv~laral~~~p~llllDE 168 (224)
T cd03220 97 PELTGRENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPVK-----TYSSGMKARLAFAIATALEPDILLIDE 168 (224)
T ss_pred CCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 77999999988654321 2233445567889999999888777754 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1027 PTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1027 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|. +|++++.|
T Consensus 169 P~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~-~G~i~~~g 224 (224)
T cd03220 169 VLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLE-KGKIRFDG 224 (224)
T ss_pred CcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEecC
Confidence 99999999999999999998777899999999976 5667899999997 58988765
No 321
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-34 Score=325.45 Aligned_cols=214 Identities=24% Similarity=0.314 Sum_probs=173.1
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCC--CC-eeEEEEEEcCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKT--SG-YVEGEIKISGY 925 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~I~i~G~ 925 (1449)
+.++|+++++. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +. ..+|+|.++|.
T Consensus 6 l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~ 72 (252)
T PRK14239 6 LQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGH 72 (252)
T ss_pred EEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCE
Confidence 66777776542 2459999999999999999999999999999999999632 21 14799999998
Q ss_pred cCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000517 926 PKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGIP 996 (1449)
Q Consensus 926 ~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~ 996 (1449)
+... ..+++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 73 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 145 (252)
T PRK14239 73 NIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHDS---- 145 (252)
T ss_pred ECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhcC----
Confidence 7531 234567999999988876 899999988654321 1112334466788899998743 23333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 997 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 997 ~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
+..||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|.
T Consensus 146 -~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~- 221 (252)
T PRK14239 146 -ALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFL- 221 (252)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEE-
Confidence 347999999999999999999999999999999999999999999999865 699999999986 5778899999998
Q ss_pred CcEEEEecCC
Q 000517 1077 GGRIIYCGPL 1086 (1449)
Q Consensus 1077 gG~~v~~G~~ 1086 (1449)
+|++++.|+.
T Consensus 222 ~G~i~~~g~~ 231 (252)
T PRK14239 222 DGDLIEYNDT 231 (252)
T ss_pred CCEEEEeCCH
Confidence 5899999875
No 322
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=8e-34 Score=310.58 Aligned_cols=190 Identities=50% Similarity=0.872 Sum_probs=160.5
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCC--CCCeeEEEEEEcCc
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRK--TSGYVEGEIKISGY 925 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~--~~~~~~G~I~i~G~ 925 (1449)
.+.++|+++.++... ....+.+|+|+|+++++||+++|+||||||||||+++|+|.. .+ .+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~--~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLG--VSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCC--CceEEEECCE
Confidence 466777777653210 001246999999999999999999999999999999999986 54 5899999998
Q ss_pred cCccccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHH
Q 000517 926 PKVQETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQ 1005 (1449)
Q Consensus 926 ~~~~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1005 (1449)
+......++.++|++|++.+++.+|++||+.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 7654455678999999998889999999997642110 499999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1006 RKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1006 rqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
|||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|+|+++|+++.++.+.+|++++|. +|++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~-~G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLS-QGRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEe-CCEEEecC
Confidence 9999999999999999999999999999999999999999977799999999998656778899999997 58988764
No 323
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.4e-34 Score=371.93 Aligned_cols=205 Identities=26% Similarity=0.416 Sum_probs=170.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1449)
.++|+|+|++++|||.++|+||||||||||+|+|+|.++|+ +|+|.+||+++++..+ ++.++||+|++.+|+ .
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS-G 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-c
Confidence 45899999999999999999999999999999999999998 9999999999887654 578999999888765 6
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
|++|||.++.. .+.++..+++...+.. +.++ .+++..||.+|+. .
T Consensus 542 TI~eNi~~~~~--------------------------~~~e~i~~al~~a~l~------~~i~--~lp~G~dt~ige~-G 586 (686)
T TIGR03797 542 SIFENIAGGAP--------------------------LTLDEAWEAARMAGLA------EDIR--AMPMGMHTVISEG-G 586 (686)
T ss_pred cHHHHHhcCCC--------------------------CCHHHHHHHHHHcCcH------HHHH--hccccccccccCC-C
Confidence 99999987421 1112223333333322 1222 3678899999975 4
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
..||||||||++||||++++|++|+||||||+||+.++.+|.+.|+++ ++|+|+..|++ ++.+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~IiItHr~--~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIVIAHRL--STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEEEecCh--HHHHcCCEEEEEECC
Confidence 569999999999999999999999999999999999999999999875 46887776665 567889999999999
Q ss_pred eEEEecChhhHHH
Q 000517 421 KIVYHGPQDHVLA 433 (1449)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1449)
+++.+|+++++.+
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999999864
No 324
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-34 Score=315.07 Aligned_cols=179 Identities=44% Similarity=0.819 Sum_probs=156.0
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC---CCCCeeeEEEECCccCCCCC--CCceEEEEcCCCccC
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLD---PSLKVTGEVSYNGYKLEEFV--PPKTSAYISQNDLHI 257 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~---~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~ 257 (1449)
++.+|+|+|+.+++|++++|+||||||||||+++|+|.++ |+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 19 ~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~ 95 (202)
T cd03233 19 KIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHF 95 (202)
T ss_pred CceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEecccccC
Confidence 3569999999999999999999999999999999999998 55 999999999876432 345799999999999
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGN 337 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 337 (1449)
+.+||+||+.++++.. .++.+
T Consensus 96 ~~~tv~~~l~~~~~~~---------------------------------------------------------~~~~~-- 116 (202)
T cd03233 96 PTLTVRETLDFALRCK---------------------------------------------------------GNEFV-- 116 (202)
T ss_pred CCCcHHHHHhhhhhhc---------------------------------------------------------cccch--
Confidence 9999999998753210 12222
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+++++||+.+++.+++|++++|
T Consensus 117 ---~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l 193 (202)
T cd03233 117 ---RGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVL 193 (202)
T ss_pred ---hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEE
Confidence 23999999999999999999999999999999999999999999999876546788888888888999999999999
Q ss_pred eCCeEEEec
Q 000517 418 AEGKIVYHG 426 (1449)
Q Consensus 418 ~~G~iv~~G 426 (1449)
++|++++.|
T Consensus 194 ~~G~i~~~g 202 (202)
T cd03233 194 YEGRQIYYG 202 (202)
T ss_pred ECCEEEecC
Confidence 999998765
No 325
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-34 Score=324.25 Aligned_cols=214 Identities=24% Similarity=0.345 Sum_probs=173.2
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISGY 925 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G~ 925 (1449)
+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14240 4 ISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQ 70 (250)
T ss_pred EEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCE
Confidence 56677765442 245999999999999999999999999999999999964321 14799999998
Q ss_pred cCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000517 926 PKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGIP 996 (1449)
Q Consensus 926 ~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~ 996 (1449)
+... ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.++++++.+++.+ ..++.
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~---- 143 (250)
T PRK14240 71 DIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKKS---- 143 (250)
T ss_pred EccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhcC----
Confidence 7532 234667999999988877 8999999986543211 122334567888899988743 23443
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 997 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 997 ~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||++||+++ ++.+.+|++++|.
T Consensus 144 -~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~- 219 (250)
T PRK14240 144 -ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFL- 219 (250)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEE-
Confidence 34799999999999999999999999999999999999999999999985 4899999999975 5778899999998
Q ss_pred CcEEEEecCC
Q 000517 1077 GGRIIYCGPL 1086 (1449)
Q Consensus 1077 gG~~v~~G~~ 1086 (1449)
+|+++..|+.
T Consensus 220 ~G~i~~~~~~ 229 (250)
T PRK14240 220 NGEIVEFGDT 229 (250)
T ss_pred CCEEEEeCCH
Confidence 5899998875
No 326
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-34 Score=326.09 Aligned_cols=216 Identities=24% Similarity=0.330 Sum_probs=175.9
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC-e--eEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG-Y--VEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~--~~G~I~i~G 924 (1449)
.+.++|+++.++ +..+|+|+|+++++||+++|+|+||||||||+++|+|...+. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 366777776542 245999999999999999999999999999999999975532 1 479999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc----ccccccccC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD----AIKDSLVGI 995 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 995 (1449)
.+... ..+++.++|++|++.+++ .|++||+.+....+. .......++.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKLNKS--- 147 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHhcCC---
Confidence 87532 234567999999998887 899999987654332 112233446678889999884 233433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||++||+++ ++.+.+|++++|.
T Consensus 148 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~ 223 (259)
T PRK14260 148 --ALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFS 223 (259)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEe
Confidence 347999999999999999999999999999999999999999999999865 699999999986 5778899999997
Q ss_pred c----CcEEEEecCC
Q 000517 1076 T----GGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~----gG~~v~~G~~ 1086 (1449)
. +|++++.|+.
T Consensus 224 ~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 224 TDESRIGQMVEFGVT 238 (259)
T ss_pred ccCCCCceEEEeCCH
Confidence 3 4899999986
No 327
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-34 Score=327.97 Aligned_cols=216 Identities=24% Similarity=0.330 Sum_probs=178.7
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|++++++. .....+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~----------~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEK----------ESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEE--FEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCC----------CCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCCEEEECCEEC
Confidence 3667787765531 0123599999999999999999999999999999999998764 589999999875
Q ss_pred cc---ccccceEEEEccCCC-CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000517 928 VQ---ETFARVSGYCEQTDI-HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLST 1003 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1003 (1449)
.. ...++.+||++|++. .++..||.||+.+..... ....+...+.++++++.+||.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTREP-----ARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 42 235678999999974 567789999998764322 1233344567889999999988777764 37999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000517 1004 EQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIY 1082 (1449)
Q Consensus 1004 GqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~ 1082 (1449)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++. + ..+|++++|. +|+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~-~G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMK-AGEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEE-CCEEEE
Confidence 9999999999999999999999999999999999999999999875 9999999999863 4 4699999998 589999
Q ss_pred ecCC
Q 000517 1083 CGPL 1086 (1449)
Q Consensus 1083 ~G~~ 1086 (1449)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 9876
No 328
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-34 Score=324.08 Aligned_cols=205 Identities=31% Similarity=0.506 Sum_probs=170.7
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1449)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|
T Consensus 16 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 92 (258)
T PRK13548 16 TLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFT 92 (258)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCC
Confidence 5899999999999999999999999999999999999987 9999999987654321 356899999988888899
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+||+.+.....+.. . ++ .+..++.+++.+||++..++.+++
T Consensus 93 v~e~l~~~~~~~~~~-~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~---- 134 (258)
T PRK13548 93 VEEVVAMGRAPHGLS-R---------AE------------------------DDALVAAALAQVDLAHLAGRDYPQ---- 134 (258)
T ss_pred HHHHHHhhhcccCCC-c---------HH------------------------HHHHHHHHHHHcCCHhHhcCCccc----
Confidence 999998864321100 0 00 011245678999998877888766
Q ss_pred cCChhhhhhHHHHHHHh------CCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEE
Q 000517 342 GISGGQKKRLTTGEMIV------GPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDII 415 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~------~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~ 415 (1449)
|||||||||+||+||+ .+|++++|||||+|||+.++..+.+.|+++++..+.|+|++. |..+++.+++|+|+
T Consensus 135 -LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~s-H~~~~~~~~~d~i~ 212 (258)
T PRK13548 135 -LSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVL-HDLNLAARYADRIV 212 (258)
T ss_pred -CCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEE-CCHHHHHHhcCEEE
Confidence 9999999999999999 599999999999999999999999999998744566766655 55678888999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000517 416 LMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1449)
+|++|++++.|+.+++.
T Consensus 213 ~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 213 LLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEECCEEEeeCCHHHHh
Confidence 99999999999987764
No 329
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=327.64 Aligned_cols=206 Identities=27% Similarity=0.350 Sum_probs=171.0
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC----CCceEEEEcCCCc-cCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV----PPKTSAYISQNDL-HIA 258 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 258 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 45999999999999999999999999999999999999997 999999999875421 2467999999864 344
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
..||.||+.|+....+... .+ .+..++++++.+||++..++.+++
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~- 144 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------EE------------------------IRERVDESLKKVGMYEYRRHAPHL- 144 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------HH------------------------HHHHHHHHHHHCCCHhHhhCCccc-
Confidence 5799999998754322110 00 011356789999999888888876
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.. +|++++|+
T Consensus 145 ----LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~-~~~~~-~d~v~~l~ 218 (280)
T PRK13633 145 ----LSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYM-EEAVE-ADRIIVMD 218 (280)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCh-HHHhc-CCEEEEEE
Confidence 9999999999999999999999999999999999999999999998765577877776554 45654 99999999
Q ss_pred CCeEEEecChhhHHH
Q 000517 419 EGKIVYHGPQDHVLA 433 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1449)
+|+++++|+++++..
T Consensus 219 ~G~i~~~g~~~~~~~ 233 (280)
T PRK13633 219 SGKVVMEGTPKEIFK 233 (280)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999988753
No 330
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4e-34 Score=357.88 Aligned_cols=219 Identities=26% Similarity=0.364 Sum_probs=182.5
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
++++|+++++ +++.+|+|+||+|++||++||+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 5 i~~~~l~~~~-------------~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAF-------------PGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEe-------------CCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 5667776554 234699999999999999999999999999999999998665 4899999998753
Q ss_pred c----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccC-CCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCH
Q 000517 929 Q----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLA-PEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLST 1003 (1449)
Q Consensus 929 ~----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1003 (1449)
. ...++.+||++|++.+++.+||+|++.++...+.. ........++.++++++.+||.+..+..++ .|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLVG-----ELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCchh-----hCCH
Confidence 2 11245699999999889999999999886432211 111223345668899999999988777754 7999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEe
Q 000517 1004 EQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYC 1083 (1449)
Q Consensus 1004 GqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~ 1083 (1449)
|||||++||+||+.+|++|||||||+|||+.++..+++.|+++++.|.|||++||+++ ++...+|++++|. +|+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~-~G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFR-DGQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEe-CCEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 5778899999997 5899999
Q ss_pred cCCCCC
Q 000517 1084 GPLGKH 1089 (1449)
Q Consensus 1084 G~~~~~ 1089 (1449)
|+..+.
T Consensus 223 ~~~~~~ 228 (501)
T PRK10762 223 REVADL 228 (501)
T ss_pred cCcCcC
Confidence 988653
No 331
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=324.83 Aligned_cols=204 Identities=23% Similarity=0.290 Sum_probs=169.7
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC---CCceEEEEcCCCc-cCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV---PPKTSAYISQNDL-HIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 260 (1449)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 4899999999999999999999999999999999999987 999999998875432 2457999999974 68889
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
|+++|+.|.....+.. . .+ ....++.+++.+||.+..|+.+++
T Consensus 100 ~v~~~~~~~~~~~~~~--~--------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~--- 142 (269)
T PRK13648 100 IVKYDVAFGLENHAVP--Y--------DE------------------------MHRRVSEALKQVDMLERADYEPNA--- 142 (269)
T ss_pred cHHHHHHhhHHhcCCC--H--------HH------------------------HHHHHHHHHHHcCCchhhhCCccc---
Confidence 9999998865432110 0 00 011245678999998877777665
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ +++.. +|+|++|++|
T Consensus 143 --LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~-~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 143 --LSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDL-SEAME-ADHVIVMNKG 218 (269)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCc-hHHhc-CCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998764467877776654 55654 9999999999
Q ss_pred eEEEecChhhHH
Q 000517 421 KIVYHGPQDHVL 432 (1449)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1449)
++++.|+++++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 332
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.5e-33 Score=322.03 Aligned_cols=213 Identities=22% Similarity=0.293 Sum_probs=173.3
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC--eeEEEEEEcCc
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG--YVEGEIKISGY 925 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~--~~~G~I~i~G~ 925 (1449)
.++++|+++.+ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~--------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~ 69 (254)
T PRK10418 4 QIELRNIALQA--------------AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGK 69 (254)
T ss_pred EEEEeCeEEEe--------------ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCe
Confidence 56777877653 135899999999999999999999999999999999986541 15799999998
Q ss_pred cCccccc-cceEEEEccCCC--CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc---cccccccCCCCC
Q 000517 926 PKVQETF-ARVSGYCEQTDI--HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA---IKDSLVGIPGVN 999 (1449)
Q Consensus 926 ~~~~~~~-~~~~gyv~Q~d~--~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~vg~~~~~ 999 (1449)
++..... ++.++|++|++. +.+..|+.+++.+.+.... .. ...+.++++++.++|.+ ..++.+ .
T Consensus 70 ~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 139 (254)
T PRK10418 70 PVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KP--ADDATLTAALEAVGLENAARVLKLYP-----F 139 (254)
T ss_pred eccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CC--hHHHHHHHHHHHcCCCChhhhhhcCC-----c
Confidence 7643222 357999999974 4466899999876543221 11 12356889999999976 344443 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000517 1000 GLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGG 1078 (1449)
Q Consensus 1000 ~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG 1078 (1449)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|. +|
T Consensus 140 ~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~-~G 217 (254)
T PRK10418 140 EMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMS-HG 217 (254)
T ss_pred ccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEE-CC
Confidence 79999999999999999999999999999999999999999999998764 899999999986 4667899999997 58
Q ss_pred EEEEecCC
Q 000517 1079 RIIYCGPL 1086 (1449)
Q Consensus 1079 ~~v~~G~~ 1086 (1449)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (254)
T PRK10418 218 RIVEQGDV 225 (254)
T ss_pred EEEEecCH
Confidence 99999875
No 333
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1e-33 Score=323.27 Aligned_cols=205 Identities=24% Similarity=0.359 Sum_probs=170.5
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC----------------CCceEE
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV----------------PPKTSA 248 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~----------------~~~~~~ 248 (1449)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 90 (252)
T TIGR03005 14 TVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIG 90 (252)
T ss_pred eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCeE
Confidence 5899999999999999999999999999999999999987 999999998775321 145799
Q ss_pred EEcCCCccCCCCCHHHHHHHHHHc-cCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCC
Q 000517 249 YISQNDLHIAEMTVRETVDFSARC-QGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGL 327 (1449)
Q Consensus 249 yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL 327 (1449)
|++|++.+++.+||+||+.++... .+.. ..+ .+..++.+++.+|+
T Consensus 91 ~v~q~~~~~~~~tv~~nl~~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gl 136 (252)
T TIGR03005 91 MVFQSFNLFPHKTVLDNVTEAPVLVLGMA----------RAE------------------------AEKRAMELLDMVGL 136 (252)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhcCCC----------HHH------------------------HHHHHHHHHHHcCC
Confidence 999999999999999999885321 1100 000 01124567889999
Q ss_pred CccccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhH
Q 000517 328 DVCADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPET 407 (1449)
Q Consensus 328 ~~~~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~ 407 (1449)
++..++.+.+ ||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++. |..+++
T Consensus 137 ~~~~~~~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivs-H~~~~~ 210 (252)
T TIGR03005 137 ADKADHMPAQ-----LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVT-HEMGFA 210 (252)
T ss_pred hhHhhcChhh-----cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEe-CCHHHH
Confidence 8777776654 9999999999999999999999999999999999999999999998764466766665 556678
Q ss_pred HhhcCeEEEEeCCeEEEecChhhHH
Q 000517 408 FDLFDDIILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 408 ~~~fD~v~lL~~G~iv~~G~~~~~~ 432 (1449)
.+++|++++|++|++++.|+.+++.
T Consensus 211 ~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 211 REFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHhcCEEEEEECCEEEEeCCHHHHh
Confidence 8999999999999999999987764
No 334
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-34 Score=323.67 Aligned_cols=215 Identities=23% Similarity=0.281 Sum_probs=173.5
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 924 (1449)
.+.++|+++.+ +++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFY-------------GENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEE-------------CCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 35667776543 2346999999999999999999999999999999999976532 2479999999
Q ss_pred ccCc----cccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000517 925 YPKV----QETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGIP 996 (1449)
Q Consensus 925 ~~~~----~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~ 996 (1449)
.+.. ....++.++|++|++.+++ .||.||+.+...... ........+.+.++++.+++.+ ..+..
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 142 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKSH---- 142 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhcC----
Confidence 8653 1234567999999998887 899999987643321 1112333456778888888753 23333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 997 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 997 ~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
...||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++++ ++|||++||++. ++.+.+|++++|+
T Consensus 143 -~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~- 218 (249)
T PRK14253 143 -AFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFL- 218 (249)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEE-
Confidence 347999999999999999999999999999999999999999999999875 689999999986 5778899999998
Q ss_pred CcEEEEecCC
Q 000517 1077 GGRIIYCGPL 1086 (1449)
Q Consensus 1077 gG~~v~~G~~ 1086 (1449)
+|+++..|+.
T Consensus 219 ~G~i~~~g~~ 228 (249)
T PRK14253 219 MGELVEHDDT 228 (249)
T ss_pred CCEEEEeCCH
Confidence 5899999875
No 335
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.4e-33 Score=321.17 Aligned_cols=206 Identities=23% Similarity=0.378 Sum_probs=168.2
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCeeeEEEECCccCCCC-----CCCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPS--LKVTGEVSYNGYKLEEF-----VPPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1449)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ ...+|+|+++|+++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 4899999999999999999999999999999999999863 12389999999987542 1245799999998888
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC----ccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD----VCADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~dt 333 (1449)
+ +||+||+.+.....+.... .+ ....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKDK---------KE------------------------LDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCCH---------HH------------------------HHHHHHHHHHHcCCCcchhhHhhC
Confidence 8 9999999987543221000 00 011245678899997 55666
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.+++ |||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++ +|...++.+++|+
T Consensus 141 ~~~~-----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiiv-sH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 SALG-----LSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--KYTIVIV-THNMQQAARISDR 212 (247)
T ss_pred Cccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCeEEEE-ecCHHHHHHhCCE
Confidence 6654 999999999999999999999999999999999999999999999865 3566665 4556688899999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
+++|++|+++++|+.+++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 336
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=323.33 Aligned_cols=216 Identities=25% Similarity=0.317 Sum_probs=173.8
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCe---eEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGY---VEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~---~~G~I~i~G 924 (1449)
.+.++|+++.++ ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 356667765442 3469999999999999999999999999999999999765422 379999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc----ccccccccC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD----AIKDSLVGI 995 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 995 (1449)
.+... ..+++.++|++|++.+++.+|+.||+.+...... ....+...+.++++++.+++. +..++.+
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~-- 146 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTPA-- 146 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCCc--
Confidence 87532 2345679999999999999999999987643321 112233345667777777764 2334443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|.
T Consensus 147 ---~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 147 ---TGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 47999999999999999999999999999999999999999999999864 799999999986 5777899999997
Q ss_pred cCcEEEEecCC
Q 000517 1076 TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~gG~~v~~G~~ 1086 (1449)
+|++++.|+.
T Consensus 222 -~G~i~~~~~~ 231 (252)
T PRK14272 222 -VGDLVEHGPT 231 (252)
T ss_pred -CCEEEEeCCH
Confidence 5899999875
No 337
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-34 Score=338.62 Aligned_cols=195 Identities=25% Similarity=0.428 Sum_probs=169.4
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCC-------CCCceEEEEcCCCccCCCCC
Q 000517 189 HVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEF-------VPPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 261 (1449)
|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++||+|+..+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999997 99999999886431 12467999999999999999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+||+.|+.+.. .+..++.+++.+||++..++.+++
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~~~---- 128 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYPGS---- 128 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCccc----
Confidence 999998853200 001246688999999888888765
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++ +|...++..++|++++|++|+
T Consensus 129 -LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~v-THd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 129 -LSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYV-SHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEE-ecCHHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999999876556676665 456678999999999999999
Q ss_pred EEEecChhhHH
Q 000517 422 IVYHGPQDHVL 432 (1449)
Q Consensus 422 iv~~G~~~~~~ 432 (1449)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999884
No 338
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-34 Score=321.05 Aligned_cols=202 Identities=23% Similarity=0.424 Sum_probs=166.3
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 260 (1449)
.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 95 (237)
T PRK11614 19 QALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRM 95 (237)
T ss_pred eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCCC
Confidence 5899999999999999999999999999999999999987 9999999998765432 35699999999889999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHh-CCCccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKIL-GLDVCADTMVGNAM 339 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~l-gL~~~~dt~vg~~~ 339 (1449)
||+||+.++..... .. + . +..++.+++.+ ++.+..++.+++
T Consensus 96 tv~~~l~~~~~~~~---~~---------~-------------~-----------~~~~~~~l~~~~~l~~~~~~~~~~-- 137 (237)
T PRK11614 96 TVEENLAMGGFFAE---RD---------Q-------------F-----------QERIKWVYELFPRLHERRIQRAGT-- 137 (237)
T ss_pred cHHHHHHHhhhccC---hh---------H-------------H-----------HHHHHHHHHHHHHHHHHHhCchhh--
Confidence 99999988542110 00 0 0 00123445555 465555555544
Q ss_pred cccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeC
Q 000517 340 RRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAE 419 (1449)
Q Consensus 340 ~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~ 419 (1449)
||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++. |..+++.+.+|++++|++
T Consensus 138 ---LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~s-H~~~~~~~~~d~i~~l~~ 212 (237)
T PRK11614 138 ---MSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QGMTIFLVE-QNANQALKLADRGYVLEN 212 (237)
T ss_pred ---CCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-CCCEEEEEe-CcHHHHHhhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999875 467777654 556788999999999999
Q ss_pred CeEEEecChhhHH
Q 000517 420 GKIVYHGPQDHVL 432 (1449)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1449)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (237)
T PRK11614 213 GHVVLEDTGDALL 225 (237)
T ss_pred CEEEeeCCHHHHh
Confidence 9999999988774
No 339
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.3e-33 Score=320.60 Aligned_cols=211 Identities=21% Similarity=0.360 Sum_probs=171.5
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 260 (1449)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 16 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (242)
T TIGR03411 16 KALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENL 92 (242)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCC
Confidence 5899999999999999999999999999999999999987 9999999988754322 34699999999999999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||+||+.++..... . ........... ..+..++.+++.+|+++..++.+++
T Consensus 93 tv~~nl~~~~~~~~-~-~~~~~~~~~~~------------------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 143 (242)
T TIGR03411 93 TVFENLELALPRDK-S-VFASLFFRLSA------------------------EEKDRIEEVLETIGLADEADRLAGL--- 143 (242)
T ss_pred CHHHHHHHhhhccc-c-cccccccccHH------------------------HHHHHHHHHHHHcCCchhhcCChhh---
Confidence 99999988643210 0 00000000000 0112356788999998888887766
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ ++|+|++. |..+++.++||+|++|++|
T Consensus 144 --LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~~s-H~~~~~~~~~d~i~~l~~g 218 (242)
T TIGR03411 144 --LSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--KHSVVVVE-HDMEFVRSIADKVTVLHQG 218 (242)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--CCEEEEEE-CCHHHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999864 46766655 5567888999999999999
Q ss_pred eEEEecChhhHH
Q 000517 421 KIVYHGPQDHVL 432 (1449)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1449)
+++++|+.+++.
T Consensus 219 ~~~~~~~~~~~~ 230 (242)
T TIGR03411 219 SVLAEGSLDQVQ 230 (242)
T ss_pred eEEeeCCHHHHh
Confidence 999999887753
No 340
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=325.06 Aligned_cols=214 Identities=25% Similarity=0.337 Sum_probs=172.6
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCC---CeeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTS---GYVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~I~i~G 924 (1449)
.+.++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 467778776542 24599999999999999999999999999999999997542 13589999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGI 995 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 995 (1449)
.+... ...++.++|++|++.+++. ||.||+.+....+. ... ..++.++++++.++|.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87531 2356789999999887775 99999988654432 112 33456889999999853 33443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
+..||||||||++|||+|+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+...+|+++++.
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 347999999999999999999999999999999999999999999999976 489999999986 5667899976443
Q ss_pred cCcEEEEecCC
Q 000517 1076 TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~gG~~v~~G~~ 1086 (1449)
++|+++..|+.
T Consensus 254 ~~G~i~~~g~~ 264 (285)
T PRK14254 254 TGGELVEFDDT 264 (285)
T ss_pred eCCEEEEeCCH
Confidence 36899999875
No 341
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-33 Score=325.73 Aligned_cols=205 Identities=23% Similarity=0.321 Sum_probs=167.0
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC-------CCceEEEEcCCCc-
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV-------PPKTSAYISQNDL- 255 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 255 (1449)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35899999999999999999999999999999999999997 999999998875421 1356899999862
Q ss_pred cCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC-cccccc
Q 000517 256 HIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD-VCADTM 334 (1449)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 334 (1449)
.+...||+||+.+.....+.. ..+ ....++.+++.+||. ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~ 142 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVS----------QEE------------------------AEALAREKLALVGISESLFEKN 142 (280)
T ss_pred hhccccHHHHHHHHHHHcCCC----------HHH------------------------HHHHHHHHHHHcCCChhhhhCC
Confidence 333479999998865432110 000 011245678889997 356666
Q ss_pred ccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeE
Q 000517 335 VGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDI 414 (1449)
Q Consensus 335 vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v 414 (1449)
+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .++|+|++.| ..+++.+++|++
T Consensus 143 ~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiiivsH-~~~~~~~~~d~i 215 (280)
T PRK13649 143 PFE-----LSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-SGMTIVLVTH-LMDDVANYADFV 215 (280)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEec-cHHHHHHhCCEE
Confidence 655 999999999999999999999999999999999999999999999875 4667776654 456788899999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000517 415 ILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~ 432 (1449)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 342
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-34 Score=323.07 Aligned_cols=214 Identities=25% Similarity=0.356 Sum_probs=173.8
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISGY 925 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G~ 925 (1449)
++++|+++.+. ++.+|+|+||++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 56777765442 346999999999999999999999999999999999975421 25899999998
Q ss_pred cCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc----ccccccCC
Q 000517 926 PKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI----KDSLVGIP 996 (1449)
Q Consensus 926 ~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~~ 996 (1449)
+... ...++.++|++|++.+++ .|++||+.+...... ....+..++.+++.++.+++.+. .+..
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 143 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELNKP---- 143 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHhCC----
Confidence 7532 234567999999998877 899999988654321 11223344567888999998542 3333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 997 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 997 ~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
..+||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||++||+++ .+.+.+|++++|.
T Consensus 144 -~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~- 219 (250)
T PRK14262 144 -GTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMY- 219 (250)
T ss_pred -hhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEE-
Confidence 347999999999999999999999999999999999999999999999865 799999999986 4778899999998
Q ss_pred CcEEEEecCC
Q 000517 1077 GGRIIYCGPL 1086 (1449)
Q Consensus 1077 gG~~v~~G~~ 1086 (1449)
+|+++..|+.
T Consensus 220 ~G~i~~~g~~ 229 (250)
T PRK14262 220 RGELIEYGPT 229 (250)
T ss_pred CCEEEEecCH
Confidence 5899999875
No 343
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=358.04 Aligned_cols=218 Identities=24% Similarity=0.317 Sum_probs=181.3
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
++++|+++++ +++.+|+|+||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 6 l~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~ 70 (510)
T PRK09700 6 ISMAGIGKSF-------------GPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEP--TKGTITINNINYN 70 (510)
T ss_pred EEEeeeEEEc-------------CCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCC--CccEEEECCEECC
Confidence 6677777654 234699999999999999999999999999999999998654 5899999998753
Q ss_pred cc----cccceEEEEccCCCCCCCCCHHHHHHHHHHhc----cCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000517 929 QE----TFARVSGYCEQTDIHSPNITVEESVIFSAWLR----LAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNG 1000 (1449)
Q Consensus 929 ~~----~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1000 (1449)
.. ..++.+||++|++.+++.+||+||+.++.... ........+..+.++++++.+||.+..++.++ +
T Consensus 71 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 145 (510)
T PRK09700 71 KLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKVA-----N 145 (510)
T ss_pred CCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccchh-----h
Confidence 21 12356999999998899999999998753211 00001223345678899999999888787764 7
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEE
Q 000517 1001 LSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRI 1080 (1449)
Q Consensus 1001 LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~ 1080 (1449)
|||||||||+||++|+.+|++|||||||+|||+.++..+++.|++++++|+|||++||+++ .+...+|++++|. +|++
T Consensus 146 LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~-~G~i 223 (510)
T PRK09700 146 LSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMK-DGSS 223 (510)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEE
Confidence 9999999999999999999999999999999999999999999999878999999999976 4677899999998 5899
Q ss_pred EEecCCCC
Q 000517 1081 IYCGPLGK 1088 (1449)
Q Consensus 1081 v~~G~~~~ 1088 (1449)
++.|+..+
T Consensus 224 ~~~g~~~~ 231 (510)
T PRK09700 224 VCSGMVSD 231 (510)
T ss_pred eeecchhh
Confidence 99998764
No 344
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=325.65 Aligned_cols=205 Identities=26% Similarity=0.391 Sum_probs=170.9
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC---CCceEEEEcCCCc-cCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV---PPKTSAYISQNDL-HIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 260 (1449)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4899999999999999999999999999999999999997 999999998875422 1356899999863 34568
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||+||+.+.....+... .+ .+..++.+++.+||.+..++.+++
T Consensus 95 tv~~~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~--- 137 (277)
T PRK13652 95 TVEQDIAFGPINLGLDE----------ET------------------------VAHRVSSALHMLGLEELRDRVPHH--- 137 (277)
T ss_pred cHHHHHHhHHHHcCCCH----------HH------------------------HHHHHHHHHHHCCChhHhcCCccc---
Confidence 99999987654321100 00 011346789999998888888765
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++. |..+++.+.||+|++|++|
T Consensus 138 --LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~t-H~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 138 --LSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFST-HQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-cCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998764466776655 5566888999999999999
Q ss_pred eEEEecChhhHH
Q 000517 421 KIVYHGPQDHVL 432 (1449)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1449)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998875
No 345
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=323.67 Aligned_cols=215 Identities=24% Similarity=0.341 Sum_probs=175.2
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 924 (1449)
.++++|+++.+. ++.+|+|+||+|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 25 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g 91 (272)
T PRK14236 25 ALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDG 91 (272)
T ss_pred EEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECC
Confidence 477888877542 235999999999999999999999999999999999975421 3589999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGI 995 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 995 (1449)
.+... ..+++.++|++|++.+++. |++||+.+...... .......++.++++++.+++.+ ..+..
T Consensus 92 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 165 (272)
T PRK14236 92 QNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHEN--- 165 (272)
T ss_pred EECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhCC---
Confidence 87532 2346789999999888875 99999987654321 1112233456788899998853 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||++||+++ ++.+.+|++++|.
T Consensus 166 --~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~ 241 (272)
T PRK14236 166 --AFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMY 241 (272)
T ss_pred --cccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEE
Confidence 347999999999999999999999999999999999999999999999975 799999999986 4677899999998
Q ss_pred cCcEEEEecCC
Q 000517 1076 TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~gG~~v~~G~~ 1086 (1449)
+|+++..|+.
T Consensus 242 -~G~i~~~g~~ 251 (272)
T PRK14236 242 -MGKLVEYGDT 251 (272)
T ss_pred -CCEEEecCCH
Confidence 5899999875
No 346
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=9.1e-34 Score=315.70 Aligned_cols=194 Identities=26% Similarity=0.423 Sum_probs=162.6
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC------CCceEEEEcCCCccC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV------PPKTSAYISQNDLHI 257 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1449)
..+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 35899999999999999999999999999999999999987 999999999876432 135799999999889
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGN 337 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 337 (1449)
+.+||+||+.++....+... .+ .+..++++++.+||++..++.+.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 137 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKKE----------RE------------------------IQRRVGAALRQVGLEHKADAFPEQ 137 (214)
T ss_pred cCCcHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCChhhhhCChhh
Confidence 99999999998754322100 00 011246688999998777777765
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .++|++++. |..+++.++||++++|
T Consensus 138 -----LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~t-H~~~~~~~~~d~i~~l 210 (214)
T TIGR02673 138 -----LSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RGTTVIVAT-HDLSLVDRVAHRVIIL 210 (214)
T ss_pred -----CCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cCCEEEEEe-CCHHHHHHhcCEEEEe
Confidence 999999999999999999999999999999999999999999999865 467766665 5567888899999999
Q ss_pred eCCe
Q 000517 418 AEGK 421 (1449)
Q Consensus 418 ~~G~ 421 (1449)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 347
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=319.94 Aligned_cols=200 Identities=23% Similarity=0.391 Sum_probs=166.6
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC---CCceEEEEcCCCccCCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV---PPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 261 (1449)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 4899999999999999999999999999999999999987 999999998875432 2457999999987776 69
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC-cccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD-VCADTMVGNAMR 340 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~vg~~~~ 340 (1449)
|+||+.+.....+ . ....++.+++.+||+ +..++.+.+
T Consensus 93 v~e~l~~~~~~~~---~-----------------------------------~~~~~~~~l~~~~l~~~~~~~~~~~--- 131 (241)
T PRK14250 93 VKDNIEYGPMLKG---E-----------------------------------KNVDVEYYLSIVGLNKEYATRDVKN--- 131 (241)
T ss_pred HHHHHhcchhhcC---c-----------------------------------HHHHHHHHHHHcCCCHHHhhCCccc---
Confidence 9999987532110 0 001235578889996 456666554
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++. |+.+++.+++|+|++|++|
T Consensus 132 --LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~s-H~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 132 --LSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWIT-HNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEe-ccHHHHHHhCCEEEEEeCC
Confidence 9999999999999999999999999999999999999999999998764467766654 5566788999999999999
Q ss_pred eEEEecChhhHH
Q 000517 421 KIVYHGPQDHVL 432 (1449)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1449)
+++..|+++++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 348
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-33 Score=316.99 Aligned_cols=205 Identities=26% Similarity=0.391 Sum_probs=173.6
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC-CCceEEEEcCCCccCCCCCHH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV-PPKTSAYISQNDLHIAEMTVR 263 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~ 263 (1449)
++|+|+|+.++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++.+.. .++.++|++|++..++.+||+
T Consensus 14 ~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (232)
T cd03300 14 VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVF 90 (232)
T ss_pred eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcHH
Confidence 5999999999999999999999999999999999999997 899999999876432 246799999999888899999
Q ss_pred HHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccC
Q 000517 264 ETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGI 343 (1449)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGl 343 (1449)
||+.+.....+... . . .....+.+++.+||++..++.+.+ |
T Consensus 91 ~nl~~~~~~~~~~~--~--------~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----l 131 (232)
T cd03300 91 ENIAFGLRLKKLPK--A--------E------------------------IKERVAEALDLVQLEGYANRKPSQ-----L 131 (232)
T ss_pred HHHHHHHHhcCCCH--H--------H------------------------HHHHHHHHHHHcCCchhhcCChhh-----C
Confidence 99988654332100 0 0 011346688999998878877755 9
Q ss_pred ChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEE
Q 000517 344 SGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIV 423 (1449)
Q Consensus 344 SGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv 423 (1449)
|||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.+..+.|++++.|+ ..++.+++|++++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~-~~~~~~~~d~i~~l~~G~~~ 210 (232)
T cd03300 132 SGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHD-QEEALTMSDRIAVMNKGKIQ 210 (232)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999876446787777655 56788999999999999999
Q ss_pred EecChhhHH
Q 000517 424 YHGPQDHVL 432 (1449)
Q Consensus 424 ~~G~~~~~~ 432 (1449)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (232)
T cd03300 211 QIGTPEEIY 219 (232)
T ss_pred ecCCHHHHH
Confidence 999877664
No 349
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-33 Score=321.62 Aligned_cols=220 Identities=21% Similarity=0.279 Sum_probs=172.6
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 260 (1449)
++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.+
T Consensus 19 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 95 (255)
T PRK11300 19 LAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFREM 95 (255)
T ss_pred EEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCCC
Confidence 5899999999999999999999999999999999999997 9999999998764321 23589999999999999
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||+||+.++........ ........ ... ....+ +....++.+++.+||.+..++.+++
T Consensus 96 tv~enl~~~~~~~~~~~---~~~~~~~~---~~~--~~~~~-----------~~~~~~~~~l~~~gl~~~~~~~~~~--- 153 (255)
T PRK11300 96 TVIENLLVAQHQQLKTG---LFSGLLKT---PAF--RRAES-----------EALDRAATWLERVGLLEHANRQAGN--- 153 (255)
T ss_pred cHHHHHHHhhhccccch---hhhhhccc---ccc--ccchh-----------HHHHHHHHHHHhCChhhhhhCChhh---
Confidence 99999998643110000 00000000 000 00000 0112346678899998877887766
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++. |..+++.+++|++++|++|
T Consensus 154 --LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~s-H~~~~~~~~~d~i~~l~~g 230 (255)
T PRK11300 154 --LAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIE-HDMKLVMGISDRIYVVNQG 230 (255)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEe-CCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998764466766655 5567888999999999999
Q ss_pred eEEEecChhhHH
Q 000517 421 KIVYHGPQDHVL 432 (1449)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1449)
++++.|+.+++.
T Consensus 231 ~i~~~~~~~~~~ 242 (255)
T PRK11300 231 TPLANGTPEEIR 242 (255)
T ss_pred eEEecCCHHHHh
Confidence 999999987763
No 350
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=9.2e-34 Score=318.97 Aligned_cols=204 Identities=23% Similarity=0.279 Sum_probs=167.2
Q ss_pred cccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC----CCCeeeEEEECCccCCCCCC-CceEEEEcCCCc--cCC
Q 000517 186 ILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDP----SLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDL--HIA 258 (1449)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~----~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 258 (1449)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 58999999999999999999999999999999999988 6 9999999988754322 257999999974 557
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC---ccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD---VCADTMV 335 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~---~~~dt~v 335 (1449)
.+|+.|++.+.....+... . .....++.+++.+||+ +..++.+
T Consensus 78 ~~t~~~~~~~~~~~~~~~~---------~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~~~ 123 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKLS---------K-------------------------QARALILEALEAVGLPDPEEVLKKYP 123 (230)
T ss_pred ccCHHHHHHHHHHHcCccH---------H-------------------------HHHHHHHHHHHHcCCCchHHHHhCCh
Confidence 7899999987643221100 0 0011246688999997 3456665
Q ss_pred cccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEE
Q 000517 336 GNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDII 415 (1449)
Q Consensus 336 g~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~ 415 (1449)
++ |||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++++..++|+|++. |..+++..++|+++
T Consensus 124 ~~-----LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~s-H~~~~~~~~~d~i~ 197 (230)
T TIGR02770 124 FQ-----LSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLFGTGILLIT-HDLGVVARIADEVA 197 (230)
T ss_pred hh-----cCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEE
Confidence 54 9999999999999999999999999999999999999999999998764466766655 55668889999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000517 416 LMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1449)
+|++|+++..|+.+++.
T Consensus 198 ~l~~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 198 VMDDGRIVERGTVKEIF 214 (230)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988774
No 351
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.2e-33 Score=323.69 Aligned_cols=215 Identities=25% Similarity=0.332 Sum_probs=173.9
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc-
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYP- 926 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~- 926 (1449)
.+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAP--DAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCccc
Confidence 366777776542 24599999999999999999999999999999999998655 58999999986
Q ss_pred ----Ccc---cc----ccceEEEEccCCC--CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-ccccc
Q 000517 927 ----KVQ---ET----FARVSGYCEQTDI--HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-IKDSL 992 (1449)
Q Consensus 927 ----~~~---~~----~~~~~gyv~Q~d~--~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 992 (1449)
+.. .. .++.++|++|++. +.+.+|+.||+.+...... ........+.+.++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 432 11 2456999999973 5677899999976432211 1112234556789999999964 55555
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeE
Q 000517 993 VGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDEL 1071 (1449)
Q Consensus 993 vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~ 1071 (1449)
+ ..||||||||++|||+|+.+|+||+|||||+|||+.+...+++.|++++++ |.|||+++|++. .+...+|++
T Consensus 149 ~-----~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 P-----TTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred C-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4 479999999999999999999999999999999999999999999998764 899999999976 466689999
Q ss_pred EEEecCcEEEEecCC
Q 000517 1072 ILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1072 ~~l~~gG~~v~~G~~ 1086 (1449)
++|. +|++++.|+.
T Consensus 223 ~~l~-~g~i~~~~~~ 236 (258)
T PRK11701 223 LVMK-QGRVVESGLT 236 (258)
T ss_pred EEEE-CCEEEEeCCH
Confidence 9997 5899999875
No 352
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=332.19 Aligned_cols=208 Identities=22% Similarity=0.290 Sum_probs=173.7
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC------CCceEEEEcCCC--c
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV------PPKTSAYISQND--L 255 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~ 255 (1449)
..+|+|||++|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 46999999999999999999999999999999999999987 999999999876542 245799999997 5
Q ss_pred cCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC-cccccc
Q 000517 256 HIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD-VCADTM 334 (1449)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 334 (1449)
+.+.+||.+++........... +++ ....+.++++.+||+ ...++.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~~~---------~~~------------------------~~~~~~~~l~~~gL~~~~~~~~ 151 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTSLS---------AAE------------------------RREKALAMMAKVGLRPEHYDRY 151 (327)
T ss_pred cCCccCHHHHHHHHHHHccCCC---------HHH------------------------HHHHHHHHHHHCCCChHHhcCC
Confidence 8899999999987654321000 000 012356789999996 456777
Q ss_pred ccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeE
Q 000517 335 VGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDI 414 (1449)
Q Consensus 335 vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v 414 (1449)
+++ |||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+..+.|+|+ ++|+...+.+++|+|
T Consensus 152 p~~-----LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~-iTHdl~~~~~~adrv 225 (327)
T PRK11308 152 PHM-----FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVF-ISHDLSVVEHIADEV 225 (327)
T ss_pred Ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEE-EeCCHHHHHHhCCEE
Confidence 655 99999999999999999999999999999999999999999999987755666555 567788888999999
Q ss_pred EEEeCCeEEEecChhhHHH
Q 000517 415 ILMAEGKIVYHGPQDHVLA 433 (1449)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~~ 433 (1449)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999988853
No 353
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=325.86 Aligned_cols=215 Identities=23% Similarity=0.318 Sum_probs=172.9
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCC--C-CeeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKT--S-GYVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~I~i~G 924 (1449)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 367777776542 2469999999999999999999999999999999999642 1 13589999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGI 995 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 995 (1449)
.+... ..+++.++|++|++.+++. |++||+.+...... .......++.+.+.++.+++.+ ..++.+
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-- 162 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSSA-- 162 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcCc--
Confidence 87532 1345679999999888875 99999987643221 1112233456778888888852 334433
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.
T Consensus 163 ---~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 163 ---LSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred ---ccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 47999999999999999999999999999999999999999999999865 689999999986 4778899999997
Q ss_pred cCcEEEEecCC
Q 000517 1076 TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~gG~~v~~G~~ 1086 (1449)
+|++++.|+.
T Consensus 238 -~G~i~~~~~~ 247 (268)
T PRK14248 238 -NGDLVEYDQT 247 (268)
T ss_pred -CCEEEEeCCH
Confidence 5899999875
No 354
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.1e-33 Score=316.09 Aligned_cols=195 Identities=27% Similarity=0.452 Sum_probs=167.0
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTDIHSP 947 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d~~~~ 947 (1449)
+.+|+|+||++++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+... ...++.++|++|++.+++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSV--QEGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLLG 95 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhcC
Confidence 5699999999999999999999999999999999997654 58999999987532 134578999999999888
Q ss_pred CCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000517 948 NITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEP 1027 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEP 1027 (1449)
.+|+.||+.+...... ....++..+.++++++.++|.+..++.+ ..||+|||||++|||+|+.+|++|+||||
T Consensus 96 ~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrv~laral~~~p~illlDEP 168 (220)
T TIGR02982 96 FLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYYP-----HNLSGGQKQRVAIARALVHRPKLVLADEP 168 (220)
T ss_pred CCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 8999999998654321 1233444567899999999987777764 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEE
Q 000517 1028 TTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRI 1080 (1449)
Q Consensus 1028 TsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~ 1080 (1449)
|+|||+.++..+.+.|+++.+ .|+|||+++|+++ +.+.+|++++|. +|++
T Consensus 169 ~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~-~g~~ 219 (220)
T TIGR02982 169 TAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHME-DGKL 219 (220)
T ss_pred CCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEE-CCEE
Confidence 999999999999999999876 4899999999975 457899999997 4665
No 355
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=6.1e-34 Score=328.50 Aligned_cols=235 Identities=26% Similarity=0.420 Sum_probs=192.5
Q ss_pred hcCCCCCCceEEEeeeEEEEEeeecCCCCCCCchhhhhhhhhccccccCccccccccccccceeeEEeCCeEEEEEcCCC
Q 000517 128 KVGIKLPTIEVRYKNLCVEAKCEVVHGKPLPTLWNSFKGMISVLPKLSGYKSLEAKINILNHVSGILKPGRMTLLLGPPG 207 (1449)
Q Consensus 128 ~~g~~~p~v~v~~~~L~v~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~G 207 (1449)
++.++-|+=.+..|++++ + +. ..++++|+|+||.+.+|+-++|+||||
T Consensus 325 ~m~LP~P~g~L~Ve~l~~---~-PP----------------------------g~~~pil~~isF~l~~G~~lgIIGPSg 372 (580)
T COG4618 325 RMPLPAPQGALSVERLTA---A-PP----------------------------GQKKPILKGISFALQAGEALGIIGPSG 372 (580)
T ss_pred CCCCCCCCceeeEeeeee---c-CC----------------------------CCCCcceecceeEecCCceEEEECCCC
Confidence 566666777888888875 2 11 123579999999999999999999999
Q ss_pred CcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCCCHHHHHHHHHHccCCCCchhhhhH
Q 000517 208 CGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEMTVRETVDFSARCQGVGSREETMME 284 (1449)
Q Consensus 208 sGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~ 284 (1449)
||||||.++|.|-.+|. +|.|.+||.+++..++ .+.+||.||+-.+|+ -||.|||. |+.
T Consensus 373 SGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIa---Rf~----------- 434 (580)
T COG4618 373 SGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIA---RFG----------- 434 (580)
T ss_pred ccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHH---hcc-----------
Confidence 99999999999999997 9999999999887764 478999999766665 69999994 221
Q ss_pred hcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCChhhhhhHHHHHHHhCCCcEE
Q 000517 285 VSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKAL 364 (1449)
Q Consensus 285 ~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vl 364 (1449)
++.|.++..+++...+.. |- ++.|++.+||.||+. ..+||||||||+++||||+++|.++
T Consensus 435 -----------~~~d~~kIieAA~lAgvH-----el---Il~lP~GYdT~iG~~-G~~LSgGQRQRIaLARAlYG~P~lv 494 (580)
T COG4618 435 -----------EEADPEKVIEAARLAGVH-----EL---ILRLPQGYDTRIGEG-GATLSGGQRQRIALARALYGDPFLV 494 (580)
T ss_pred -----------ccCCHHHHHHHHHHcChH-----HH---HHhCcCCccCccCCC-CCCCCchHHHHHHHHHHHcCCCcEE
Confidence 133444444444443322 22 345999999999985 5679999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEEecChhhHHHHH
Q 000517 365 FMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVYHGPQDHVLAFF 435 (1449)
Q Consensus 365 lLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~~G~~~~~~~~F 435 (1449)
+||||-|+||+.....+.+.|.++.. .|.|+|+..|. |.+...+|+|++|++|++-.+|+++|++...
T Consensus 495 VLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvviaHR--Ps~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 495 VLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVVIAHR--PSALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred EecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEEEecC--HHHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 99999999999999999999999754 57777776554 5688999999999999999999999998754
No 356
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.3e-33 Score=332.25 Aligned_cols=214 Identities=20% Similarity=0.258 Sum_probs=171.8
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-------CceEEEEcCCC--
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-------PKTSAYISQND-- 254 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d-- 254 (1449)
..+|+|||++|++||+++|+|+||||||||+++|+|.++|+...+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 459999999999999999999999999999999999998842248999999998765432 24799999997
Q ss_pred ccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccc
Q 000517 255 LHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTM 334 (1449)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 334 (1449)
.+.+.+||.+++.+......... ..+ ....+.++++.+||++..+.
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~~~---------~~~------------------------~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKGMS---------KAE------------------------AFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCC---------HHH------------------------HHHHHHHHHHHcCCCChHHH-
Confidence 68899999999987654321100 000 01134567888999753322
Q ss_pred ccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeE
Q 000517 335 VGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDI 414 (1449)
Q Consensus 335 vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v 414 (1449)
. +.....|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+..+.|+++ ++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~-iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIM-ITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEE-EECCHHHHHHhCCEE
Confidence 1 22345699999999999999999999999999999999999999999999997755566555 556677888899999
Q ss_pred EEEeCCeEEEecChhhHHH
Q 000517 415 ILMAEGKIVYHGPQDHVLA 433 (1449)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~~ 433 (1449)
++|++|+|++.|+.+++.+
T Consensus 233 ~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999988853
No 357
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=325.42 Aligned_cols=219 Identities=24% Similarity=0.409 Sum_probs=174.1
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|++++++ +++.+|+|+|++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRL--ASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEh
Confidence 467777776542 124699999999999999999999999999999999998665 589999999875
Q ss_pred ccccccceEEEEccCCCCC--CCCCHHHHHHHHHHhcc-CCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000517 928 VQETFARVSGYCEQTDIHS--PNITVEESVIFSAWLRL-APEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 928 ~~~~~~~~~gyv~Q~d~~~--~~lTv~e~l~f~~~lr~-~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1004 (1449)
.....++.++|++|++.+. ...+++|++.++..... .........++.++++++.+||.+..++.++ .||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQIG-----ELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCcc-----cCCHH
Confidence 4322234699999997642 23578998865321000 0011122334567889999999888777754 69999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ +|++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~--~G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV--KGTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE--CCEEEeec
Confidence 999999999999999999999999999999999999999999877999999999986 567889998666 48999999
Q ss_pred CCCC
Q 000517 1085 PLGK 1088 (1449)
Q Consensus 1085 ~~~~ 1088 (1449)
+..+
T Consensus 224 ~~~~ 227 (272)
T PRK15056 224 PTET 227 (272)
T ss_pred CHHh
Confidence 8753
No 358
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=322.89 Aligned_cols=206 Identities=21% Similarity=0.276 Sum_probs=169.3
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCccCcc-----ccccceEEEEccCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISGYPKVQ-----ETFARVSGYCEQTDI 944 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G~~~~~-----~~~~~~~gyv~Q~d~ 944 (1449)
+..+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 20 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 99 (261)
T PRK14263 20 NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPN 99 (261)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCc
Confidence 456999999999999999999999999999999999976531 258999999987532 234567999999988
Q ss_pred CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 945 HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 945 ~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
++ .+|+.||+.+....+. . .....+.++++++.++|.+..+...+. ..+.||||||||++|||||+.+|++|+|
T Consensus 100 ~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~~~LS~G~~qrv~laral~~~p~llll 173 (261)
T PRK14263 100 PF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLKV-SGLSLSGGQQQRLCIARAIATEPEVLLL 173 (261)
T ss_pred cc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhhC-CcccCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 76 5999999988754432 1 123345788899999986433222221 2357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe-------cCcEEEEecCC
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK-------TGGRIIYCGPL 1086 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~-------~gG~~v~~G~~ 1086 (1449)
||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|. ++|+++..|+.
T Consensus 174 DEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 174 DEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred eCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 99999999999999999999985 4799999999986 4778899999996 46999999985
No 359
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=331.50 Aligned_cols=210 Identities=22% Similarity=0.279 Sum_probs=170.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CeeeEEEECCccCCCCCC-------CceEEEEcCCC-
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSL-KVTGEVSYNGYKLEEFVP-------PKTSAYISQND- 254 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 254 (1449)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|.++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 469999999999999999999999999999999999987521 138999999998765432 23699999997
Q ss_pred -ccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc---c
Q 000517 255 -LHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV---C 330 (1449)
Q Consensus 255 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~---~ 330 (1449)
.+.|.+||.+++........... +++ ....++++|+.+||++ .
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~~---------~~~------------------------~~~~~~~~L~~~gL~~~~~~ 146 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGGN---------KKT------------------------RRQRAIDLLNQVGIPDPASR 146 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCCC---------HHH------------------------HHHHHHHHHHHCCCCChHHH
Confidence 47899999999876544321000 000 1123567899999974 3
Q ss_pred ccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhh
Q 000517 331 ADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDL 410 (1449)
Q Consensus 331 ~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~ 410 (1449)
.+..++ .|||||||||+||+||+.+|++|++||||+|||+.++.++++.|+++.+..+.|+|+ ++|+...+.++
T Consensus 147 l~~~p~-----~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~-iTHdl~~~~~~ 220 (326)
T PRK11022 147 LDVYPH-----QLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVL-ITHDLALVAEA 220 (326)
T ss_pred HhCCch-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEE-EeCCHHHHHHh
Confidence 455554 499999999999999999999999999999999999999999999997755666655 45667788899
Q ss_pred cCeEEEEeCCeEEEecChhhHH
Q 000517 411 FDDIILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 411 fD~v~lL~~G~iv~~G~~~~~~ 432 (1449)
+|+|++|.+|++++.|+.+++.
T Consensus 221 adri~vm~~G~ive~g~~~~~~ 242 (326)
T PRK11022 221 AHKIIVMYAGQVVETGKAHDIF 242 (326)
T ss_pred CCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999998875
No 360
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.7e-34 Score=314.09 Aligned_cols=187 Identities=24% Similarity=0.305 Sum_probs=157.7
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEccCCCCCCCCCH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHSPNITV 951 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 951 (1449)
+.+|+|+|++|++||+++|+|+||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++.+|+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~tv 91 (204)
T PRK13538 14 RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARP--DAGEVLWQGEPIRRQRDEYHQDLLYLGHQPGIKTELTA 91 (204)
T ss_pred EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcccchHHhhhheEEeCCccccCcCCcH
Confidence 4699999999999999999999999999999999998665 58999999987532 2345678999999988899999
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000517 952 EESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGL 1031 (1449)
Q Consensus 952 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgL 1031 (1449)
.||+.+....+. . ..++.++++++.+||.+..++.+ ..||||||||++||++|+.+|++++|||||+||
T Consensus 92 ~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~~L 160 (204)
T PRK13538 92 LENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVPV-----RQLSAGQQRRVALARLWLTRAPLWILDEPFTAI 160 (204)
T ss_pred HHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCccC
Confidence 999988654321 1 22356789999999987777764 379999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEE
Q 000517 1032 DARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILL 1074 (1449)
Q Consensus 1032 D~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l 1074 (1449)
|+.+...+++.|++++++|+|||++||+++ .+..+-++++++
T Consensus 161 D~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 161 DKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 999999999999998777899999999976 344443455444
No 361
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.3e-33 Score=317.63 Aligned_cols=202 Identities=27% Similarity=0.376 Sum_probs=166.5
Q ss_pred ccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCCCHHHHH
Q 000517 187 LNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTVRETV 266 (1449)
Q Consensus 187 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 266 (1449)
|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 58999999999999999999999999999999999987 9999999998765322 248999999999999999999
Q ss_pred HHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCChh
Q 000517 267 DFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGISGG 346 (1449)
Q Consensus 267 ~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlSGG 346 (1449)
.+......... ...+ ....++.+++.+||++..++.+++ ||||
T Consensus 76 ~~~~~~~~~~~--------~~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPDL--------SKSE------------------------RRAIVEEHIALVGLTEAADKRPGQ-----LSGG 118 (230)
T ss_pred HHHHHhcccCC--------CHHH------------------------HHHHHHHHHHHcCCHHHHcCChhh-----CCHH
Confidence 88632100000 0000 011245678999998878887765 9999
Q ss_pred hhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEEec
Q 000517 347 QKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVYHG 426 (1449)
Q Consensus 347 qrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~~G 426 (1449)
|||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..++|+|++. |..+++.+++|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~~tii~~s-H~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHRVTVLMVT-HDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhcCEEEEEeCCcEeccc
Confidence 999999999999999999999999999999999999999998765566776665 5566888999999999999999988
Q ss_pred ChhhH
Q 000517 427 PQDHV 431 (1449)
Q Consensus 427 ~~~~~ 431 (1449)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65543
No 362
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-33 Score=322.88 Aligned_cols=204 Identities=28% Similarity=0.406 Sum_probs=168.3
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC-----CCceEEEEcCCCc-cCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV-----PPKTSAYISQNDL-HIA 258 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~~ 258 (1449)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 15 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (271)
T PRK13638 15 PVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIF 91 (271)
T ss_pred ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhccc
Confidence 5899999999999999999999999999999999999997 999999999874211 1356999999864 345
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
..|+.||+.+.....+... .+ ....++.+++.+||.+..++.+++
T Consensus 92 ~~~~~~~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~- 136 (271)
T PRK13638 92 YTDIDSDIAFSLRNLGVPE----------AE------------------------ITRRVDEALTLVDAQHFRHQPIQC- 136 (271)
T ss_pred cccHHHHHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCCHhHhcCCchh-
Confidence 6789999988654321100 00 011245678899998877887765
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+.|+|++ +|...++.+++|++++|+
T Consensus 137 ----LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tii~v-tH~~~~~~~~~d~i~~l~ 210 (271)
T PRK13638 137 ----LSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QGNHVIIS-SHDIDLIYEISDAVYVLR 210 (271)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEE-eCCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999875 46676665 466678889999999999
Q ss_pred CCeEEEecChhhHH
Q 000517 419 EGKIVYHGPQDHVL 432 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1449)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~g~~~~~~ 224 (271)
T PRK13638 211 QGQILTHGAPGEVF 224 (271)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988764
No 363
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1e-33 Score=314.91 Aligned_cols=201 Identities=23% Similarity=0.308 Sum_probs=170.3
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|++.++ +++.+|+++|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSR-------------NEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEec-------------CCceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 36677776543 224599999999999999999999999999999999998665 489999999876
Q ss_pred ccccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHH
Q 000517 928 VQETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRK 1007 (1449)
Q Consensus 928 ~~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1007 (1449)
.....++.++|++|++.+++.+|+.||+.+....+. ....+.++++++.++|.+..++.++ .|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG------RRAKQMPGSALAIVGLAGYEDTLVR-----QLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC------CcHHHHHHHHHHHcCChhhccCChh-----hCCHHHHH
Confidence 433345568999999988888999999988654321 1123456788999999887777654 79999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 1008 RLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 1008 Rl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
|++||++++.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999998888999999999986 5788999999885
No 364
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-33 Score=314.51 Aligned_cols=210 Identities=25% Similarity=0.351 Sum_probs=173.7
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCC-C-C-eeEEEEEEcCccCc---cc---c-ccceEEEEccC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKT-S-G-YVEGEIKISGYPKV---QE---T-FARVSGYCEQT 942 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~-~-~-~~~G~I~i~G~~~~---~~---~-~~~~~gyv~Q~ 942 (1449)
..++++||||++++||++||+|.|||||||+.++|.|... + + ..+|+|.++|.++. .+ . +.+.++|++|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 3579999999999999999999999999999999999765 2 2 45789999998642 22 2 23579999999
Q ss_pred C--CCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 000517 943 D--IHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPS 1020 (1449)
Q Consensus 943 d--~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~ 1020 (1449)
+ .+.|.+||.+.+.-......... .+++..+++.++|+.+||.+-....-. .+.+|||||||||.||.||+.+|+
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~--YPhelSGGMrQRV~IAmala~~P~ 173 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKS--YPHELSGGMRQRVMIAMALALNPK 173 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhh--CCcccCCcHHHHHHHHHHHhCCCC
Confidence 6 46789999888766544322111 345567788999999999864322211 245899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1021 IIFMDEPTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1021 illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
+||.||||++||...+.+|+++|+++.+ .|.|+|++|||.. -+.+.+|++.+|. .|++|+.|+..
T Consensus 174 LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMY-aG~iVE~g~~~ 239 (316)
T COG0444 174 LLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMY-AGRIVEEGPVE 239 (316)
T ss_pred EEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEE-CcEEEEeCCHH
Confidence 9999999999999999999999999986 6999999999987 4889999999998 59999999974
No 365
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-33 Score=325.42 Aligned_cols=208 Identities=25% Similarity=0.349 Sum_probs=170.7
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC---CCceEEEEcCCCc-cCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV---PPKTSAYISQNDL-HIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 260 (1449)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+...+|+|+++|.++.... .++.++|++|++. .++.+
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 100 (282)
T PRK13640 21 PALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGA 100 (282)
T ss_pred cceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccC
Confidence 5899999999999999999999999999999999999886212399999999875432 2357999999974 67789
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||+||+.|..+..+.. ..+ ....++.+++.+||.+..++.+.+
T Consensus 101 tv~enl~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~L~~~~~~~~~~--- 143 (282)
T PRK13640 101 TVGDDVAFGLENRAVP----------RPE------------------------MIKIVRDVLADVGMLDYIDSEPAN--- 143 (282)
T ss_pred CHHHHHHhhHHhCCCC----------HHH------------------------HHHHHHHHHHHCCChhHhcCCccc---
Confidence 9999998864332110 000 011346678999998877877765
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ +++ ..||++++|++|
T Consensus 144 --LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~-~~~-~~~d~i~~l~~G 219 (282)
T PRK13640 144 --LSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDI-DEA-NMADQVLVLDDG 219 (282)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHH-HhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998765567877776654 455 579999999999
Q ss_pred eEEEecChhhHHH
Q 000517 421 KIVYHGPQDHVLA 433 (1449)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1449)
++++.|+++++.+
T Consensus 220 ~i~~~g~~~~~~~ 232 (282)
T PRK13640 220 KLLAQGSPVEIFS 232 (282)
T ss_pred EEEEeCCHHHHhc
Confidence 9999999988753
No 366
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.1e-33 Score=318.29 Aligned_cols=197 Identities=27% Similarity=0.377 Sum_probs=164.1
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-------CceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-------PKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~~ 257 (1449)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 5899999999999999999999999999999999999987 9999999998765322 24699999999889
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGN 337 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 337 (1449)
+.+||+||+.+.....+.. . .+ ....++.+++.+||.+..++.+++
T Consensus 101 ~~~tv~~~l~~~~~~~~~~-~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 146 (228)
T PRK10584 101 PTLNALENVELPALLRGES-S---------RQ------------------------SRNGAKALLEQLGLGKRLDHLPAQ 146 (228)
T ss_pred CCcCHHHHHHHHHHhcCCC-H---------HH------------------------HHHHHHHHHHHcCCHhHhhCChhh
Confidence 9999999998865332110 0 00 011346678999998877777765
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++ +++ +.+|++++|
T Consensus 147 -----LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~-~~~d~i~~l 219 (228)
T PRK10584 147 -----LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDL-QLA-ARCDRRLRL 219 (228)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHH-HhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998765567777766654 455 559999999
Q ss_pred eCCeEEEe
Q 000517 418 AEGKIVYH 425 (1449)
Q Consensus 418 ~~G~iv~~ 425 (1449)
++|++++.
T Consensus 220 ~~g~i~~~ 227 (228)
T PRK10584 220 VNGQLQEE 227 (228)
T ss_pred ECCEEEec
Confidence 99999753
No 367
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.5e-34 Score=284.83 Aligned_cols=202 Identities=27% Similarity=0.403 Sum_probs=174.3
Q ss_pred ccccccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-------CceEEEEc
Q 000517 179 SLEAKINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-------PKTSAYIS 251 (1449)
Q Consensus 179 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~ 251 (1449)
....+.+||++|++.|++||-++|+|||||||||||-+|+|+-+|+ +|+|.+.|+++..+.. .+.+|+|+
T Consensus 18 ~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVF 94 (228)
T COG4181 18 QGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVF 94 (228)
T ss_pred CCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEE
Confidence 3445678999999999999999999999999999999999999998 9999999999876542 36899999
Q ss_pred CCCccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccc
Q 000517 252 QNDLHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCA 331 (1449)
Q Consensus 252 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 331 (1449)
|...++|+||..||+...+.++|...+. . .......|+.+||.+..
T Consensus 95 QSF~Lip~ltAlENV~lPleL~ge~~~~----------------------~------------~~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 95 QSFHLIPNLTALENVALPLELRGESSAD----------------------S------------RAGAKALLEAVGLGKRL 140 (228)
T ss_pred EeeeccccchhhhhccchhhhcCCcccc----------------------H------------HHHHHHHHHHhCccccc
Confidence 9999999999999999988877643211 0 11235578999999988
Q ss_pred cccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhc
Q 000517 332 DTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLF 411 (1449)
Q Consensus 332 dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~f 411 (1449)
+.+.+. |||||+|||+||||+...|+|||-||||-.||..|..+|.+.|=.+.+..+.|.|+..|.| ....-|
T Consensus 141 ~HyP~q-----LSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~--~LA~Rc 213 (228)
T COG4181 141 THYPAQ-----LSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDP--QLAARC 213 (228)
T ss_pred ccCccc-----cCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCH--HHHHhh
Confidence 888775 9999999999999999999999999999999999999999999888887777777665543 577889
Q ss_pred CeEEEEeCCeEEE
Q 000517 412 DDIILMAEGKIVY 424 (1449)
Q Consensus 412 D~v~lL~~G~iv~ 424 (1449)
||.+-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999874
No 368
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=321.25 Aligned_cols=214 Identities=22% Similarity=0.282 Sum_probs=172.4
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISGY 925 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G~ 925 (1449)
+.++|+++.+ +++.+|+|+|++|++|++++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 5 l~~~~l~~~~-------------~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~ 71 (251)
T PRK14249 5 IKIRGVNFFY-------------HKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNE 71 (251)
T ss_pred EEEEEEEEEE-------------CCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCE
Confidence 5566766543 2245999999999999999999999999999999999976542 13699999998
Q ss_pred cCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000517 926 PKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGIP 996 (1449)
Q Consensus 926 ~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~ 996 (1449)
+... ..+++.++|++|++.+++. |++||+.+....+... ..+..++.++++++.++|.+ ..+..
T Consensus 72 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~--~~~~~~~~~~~~l~~~~l~~~l~~~~~~~---- 144 (251)
T PRK14249 72 NIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGTT--AQSRLDEVVEKSLRQAALWDEVKDNLHKS---- 144 (251)
T ss_pred EccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCCC--hhhHHHHHHHHHHHHhCCchhhhhHhhCC----
Confidence 7532 2346789999999988875 9999999875433111 12223455777888888753 23333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 997 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 997 ~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|.
T Consensus 145 -~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~- 220 (251)
T PRK14249 145 -GLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLL- 220 (251)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEe-
Confidence 34799999999999999999999999999999999999999999999985 5899999999986 5677889999997
Q ss_pred CcEEEEecCC
Q 000517 1077 GGRIIYCGPL 1086 (1449)
Q Consensus 1077 gG~~v~~G~~ 1086 (1449)
+|++++.|+.
T Consensus 221 ~G~i~~~~~~ 230 (251)
T PRK14249 221 TGDLVEYGRT 230 (251)
T ss_pred CCeEEEeCCH
Confidence 5899999886
No 369
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-33 Score=320.16 Aligned_cols=206 Identities=24% Similarity=0.337 Sum_probs=164.2
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CeeeEEEECCccCCCC-----CCCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSL--KVTGEVSYNGYKLEEF-----VPPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1449)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+. ..+|+|.++|+++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 48999999999999999999999999999999999998631 1389999999876421 1245799999998777
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCC----Cccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGL----DVCADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL----~~~~dt 333 (1449)
+ +||+||+.++....+.... .+ .+..++.+++.+|+ ++..++
T Consensus 101 ~-~tv~eni~~~~~~~~~~~~---------~~------------------------~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 L-MSIYDNISYGPKIHGTKDK---------KK------------------------LDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred c-CcHHHHHHHHHHhcCCCCH---------HH------------------------HHHHHHHHHHHhCCchhhHHHHhC
Confidence 4 9999999987543221000 00 01123456677776 334566
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.+++ |||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|+|++ +|..+++.+++|+
T Consensus 147 ~~~~-----LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tvii~-sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 NALS-----LSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE--SYTIIIV-THNMQQAGRISDR 218 (254)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc--CCEEEEE-eCCHHHHHHhCCE
Confidence 6554 999999999999999999999999999999999999999999999853 5666665 4556678899999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
+++|++|+++..|+++++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988774
No 370
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=326.79 Aligned_cols=215 Identities=22% Similarity=0.324 Sum_probs=173.6
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCC--CC-eeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKT--SG-YVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~I~i~G 924 (1449)
.+.++|+++.++ ...+|+|+|++|++||+++|+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 467788776542 2359999999999999999999999999999999999643 20 2589999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc----ccccccccC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD----AIKDSLVGI 995 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 995 (1449)
.+... ..+++.++|++|++.+++. ||.||+.+....+.. .+....++.+.++++.+++. +..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87531 1346679999999988774 999999986543211 11233345677888888874 333443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|.
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 347999999999999999999999999999999999999999999999865 689999999986 4677899999998
Q ss_pred cCcEEEEecCC
Q 000517 1076 TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~gG~~v~~G~~ 1086 (1449)
+|+++..|+.
T Consensus 256 -~G~i~~~g~~ 265 (286)
T PRK14275 256 -EGVLVEHAPT 265 (286)
T ss_pred -CCEEEEeCCH
Confidence 5899999885
No 371
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=321.76 Aligned_cols=215 Identities=26% Similarity=0.322 Sum_probs=173.9
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 924 (1449)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 366777776542 346999999999999999999999999999999999964321 1379999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGI 995 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 995 (1449)
.+... ...++.++|++|++.+++. ||+||+.+....+.. ......++.+.++++.+++.+ ..++.
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 146 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHDS--- 146 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhcC---
Confidence 87532 2345679999999988874 999999987544321 122334456788889888753 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
...||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|.
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~ 222 (253)
T PRK14261 147 --ALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMY 222 (253)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEE
Confidence 347999999999999999999999999999999999999999999999875 689999999976 4667899999997
Q ss_pred cCcEEEEecCC
Q 000517 1076 TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~gG~~v~~G~~ 1086 (1449)
+|+++..|+.
T Consensus 223 -~G~i~~~g~~ 232 (253)
T PRK14261 223 -LGKLIEFDKT 232 (253)
T ss_pred -CCEEEEcCCH
Confidence 5899999885
No 372
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=7.5e-34 Score=312.85 Aligned_cols=185 Identities=28% Similarity=0.341 Sum_probs=159.5
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEccCCCCCCCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHSPNIT 950 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lT 950 (1449)
++.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (201)
T cd03231 12 GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTLS 89 (201)
T ss_pred CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccccHHhhhheEEeccccccCCCcC
Confidence 34699999999999999999999999999999999998665 48999999987532 345668999999998888999
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000517 951 VEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTG 1030 (1449)
Q Consensus 951 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsg 1030 (1449)
++||+.+.... ...+.++++++.++|.+..++.+ ..||||||||++|||+|+.+|++|+|||||+|
T Consensus 90 v~e~l~~~~~~---------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~ 155 (201)
T cd03231 90 VLENLRFWHAD---------HSDEQVEEALARVGLNGFEDRPV-----AQLSAGQQRRVALARLLLSGRPLWILDEPTTA 155 (201)
T ss_pred HHHHHHhhccc---------ccHHHHHHHHHHcCChhhhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCC
Confidence 99999874211 12356788999999988777664 37999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEE
Q 000517 1031 LDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILL 1074 (1449)
Q Consensus 1031 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l 1074 (1449)
||+.+...+++.|+++.++|+|+|+++|++. ++...+++++.+
T Consensus 156 LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 156 LDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 9999999999999998777999999999976 567788888776
No 373
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=321.27 Aligned_cols=215 Identities=22% Similarity=0.317 Sum_probs=173.2
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCC--C-eeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTS--G-YVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~I~i~G 924 (1449)
.+.++|+++++. .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 366777776542 24699999999999999999999999999999999997641 1 2589999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGI 995 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 995 (1449)
.+... ...++.++|++|++.+++ .||+||+.+....+.. ...+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAGV--KDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87531 234567999999988776 7999999876433211 112233456788899999842 23333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 347999999999999999999999999999999999999999999999854 799999999986 5677899999997
Q ss_pred cCcEEEEecCC
Q 000517 1076 TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~gG~~v~~G~~ 1086 (1449)
+|+++..|+.
T Consensus 221 -~G~i~~~~~~ 230 (251)
T PRK14251 221 -NGDLIEAGPT 230 (251)
T ss_pred -CCEEEEeCCH
Confidence 5899998875
No 374
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=6.3e-34 Score=371.12 Aligned_cols=206 Identities=26% Similarity=0.392 Sum_probs=170.8
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1449)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|. .
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLFE-G 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhhh-c
Confidence 45999999999999999999999999999999999999998 9999999999876653 678999999888775 6
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
|++|||.++. |+.+.++..+++...+.. +.++ .++...||.+|+. .
T Consensus 568 Ti~eNi~l~~-------------------------~~~~~~~i~~al~~~~l~------~~i~--~lp~gl~t~i~e~-G 613 (710)
T TIGR03796 568 TVRDNLTLWD-------------------------PTIPDADLVRACKDAAIH------DVIT--SRPGGYDAELAEG-G 613 (710)
T ss_pred cHHHHhhCCC-------------------------CCCCHHHHHHHHHHhCCH------HHHH--hCcCcccceeccC-C
Confidence 9999997641 112223333444333332 1222 3677889999975 4
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
+.||||||||++||||++++|++|+||||||+||+.++.+|.+.|++ .++|+|+..|++ +....+|+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~IiitHrl--~~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCIIVAHRL--STIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEEEecCH--HHHHhCCEEEEEeCC
Confidence 66999999999999999999999999999999999999999999876 368888876664 456789999999999
Q ss_pred eEEEecChhhHHH
Q 000517 421 KIVYHGPQDHVLA 433 (1449)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1449)
+++..|+++++++
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999875
No 375
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=322.32 Aligned_cols=221 Identities=22% Similarity=0.299 Sum_probs=176.2
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 924 (1449)
.++++|+++.+. +..+|+|+||++++||+++|+|+||||||||+++|+|...+. ..+|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 367778776542 235999999999999999999999999999999999976542 1369999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVN 999 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 999 (1449)
.+... ...++.++|++|+..+++ .|+.||+.+....... ....+..+.+.++++.+++.+..+...+. .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87421 234567999999988887 8999999876433211 12233346678899999985422111121 134
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecC-
Q 000517 1000 GLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTG- 1077 (1449)
Q Consensus 1000 ~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~g- 1077 (1449)
.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ .|+|||++||++. ++.+.+|++++|+++
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999865 4899999999986 578899999999842
Q ss_pred ---cEEEEecCC
Q 000517 1078 ---GRIIYCGPL 1086 (1449)
Q Consensus 1078 ---G~~v~~G~~ 1086 (1449)
|++++.|++
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 899999986
No 376
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2e-33 Score=322.90 Aligned_cols=207 Identities=25% Similarity=0.351 Sum_probs=170.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC------CCceEEEEcCCC--c
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV------PPKTSAYISQND--L 255 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~ 255 (1449)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|+++|.++.... .++.++|++|++ .
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 46999999999999999999999999999999999999997 999999998876432 135699999986 4
Q ss_pred cCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC-cccccc
Q 000517 256 HIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD-VCADTM 334 (1449)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 334 (1449)
+.+.+||+||+.+....... ....+ ....++.+++.+||. ...+..
T Consensus 101 ~~~~~tv~~~l~~~~~~~~~---------~~~~~------------------------~~~~~~~~l~~~gl~~~~~~~~ 147 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLTS---------LDESE------------------------QKARIAELLDMVGLRSEDADKL 147 (265)
T ss_pred cCCCCCHHHHHHHHHHHhcC---------CCHHH------------------------HHHHHHHHHHHcCCChhhhhCC
Confidence 66789999999875431100 00000 011246678999996 566776
Q ss_pred ccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeE
Q 000517 335 VGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDI 414 (1449)
Q Consensus 335 vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v 414 (1449)
+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..++|+|++. |..+.+.+++|++
T Consensus 148 ~~~-----LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivs-H~~~~~~~~~d~i 221 (265)
T TIGR02769 148 PRQ-----LSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFIT-HDLRLVQSFCQRV 221 (265)
T ss_pred hhh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEe-CCHHHHHHHhcEE
Confidence 655 9999999999999999999999999999999999999999999998764466766654 5567888899999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000517 415 ILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~ 432 (1449)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 222 AVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEeCCEEEEECCHHHHc
Confidence 999999999999988774
No 377
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-33 Score=315.99 Aligned_cols=201 Identities=22% Similarity=0.424 Sum_probs=168.9
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCCHHHHHH
Q 000517 189 HVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMTVRETVD 267 (1449)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 267 (1449)
|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999987 9999999998754322 357999999998999999999998
Q ss_pred HHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCChhh
Q 000517 268 FSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGISGGQ 347 (1449)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlSGGq 347 (1449)
+.... ..... .. .+..++.+++.+||++..++.+.. |||||
T Consensus 94 ~~~~~-~~~~~--------~~-------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLKLN--------AA-------------------------QREKLHAIARQMGIEDLLARLPGQ-----LSGGQ 134 (232)
T ss_pred ccccc-ccCCC--------HH-------------------------HHHHHHHHHHHcCcHHHHhCCccc-----CCHHH
Confidence 75321 00000 00 012356688999998888888765 99999
Q ss_pred hhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEEecC
Q 000517 348 KKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVYHGP 427 (1449)
Q Consensus 348 rkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~~G~ 427 (1449)
|||++||++++.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++. |...++.+++|++++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~s-H~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVS-HSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEE-CCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998765567777765 55667889999999999999999999
Q ss_pred hhhHH
Q 000517 428 QDHVL 432 (1449)
Q Consensus 428 ~~~~~ 432 (1449)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 88765
No 378
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.8e-33 Score=320.44 Aligned_cols=204 Identities=24% Similarity=0.335 Sum_probs=168.3
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCC----------------CCCceEE
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEF----------------VPPKTSA 248 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~----------------~~~~~~~ 248 (1449)
++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|+++|.++... ..++.++
T Consensus 19 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (257)
T PRK10619 19 EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLT 95 (257)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhceE
Confidence 5899999999999999999999999999999999999987 99999999876421 1135799
Q ss_pred EEcCCCccCCCCCHHHHHHHHHH-ccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCC
Q 000517 249 YISQNDLHIAEMTVRETVDFSAR-CQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGL 327 (1449)
Q Consensus 249 yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL 327 (1449)
|++|++.+++.+||+||+.++.. ..+.. ..+ ....+.++++.+||
T Consensus 96 ~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gl 141 (257)
T PRK10619 96 MVFQHFNLWSHMTVLENVMEAPIQVLGLS----------KQE------------------------ARERAVKYLAKVGI 141 (257)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhCCCC----------HHH------------------------HHHHHHHHHHHcCC
Confidence 99999999999999999987542 11100 000 01124567899999
Q ss_pred Cccc-cccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchh
Q 000517 328 DVCA-DTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPE 406 (1449)
Q Consensus 328 ~~~~-dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~ 406 (1449)
.+.. ++.++. ||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++. |...+
T Consensus 142 ~~~~~~~~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~g~tiiivs-H~~~~ 214 (257)
T PRK10619 142 DERAQGKYPVH-----LSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-EGKTMVVVT-HEMGF 214 (257)
T ss_pred ChhhhhCCccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEe-CCHHH
Confidence 7653 555544 999999999999999999999999999999999999999999999875 467776654 55667
Q ss_pred HHhhcCeEEEEeCCeEEEecChhhHH
Q 000517 407 TFDLFDDIILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 407 ~~~~fD~v~lL~~G~iv~~G~~~~~~ 432 (1449)
+.++||+|++|++|++++.|+.+++.
T Consensus 215 ~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 215 ARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 88899999999999999999988764
No 379
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=320.03 Aligned_cols=206 Identities=19% Similarity=0.339 Sum_probs=171.4
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIAE 259 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 259 (1449)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|+++|.++..... ++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 35999999999999999999999999999999999999987 9999999988754332 3569999999988999
Q ss_pred CCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccc
Q 000517 260 MTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAM 339 (1449)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 339 (1449)
+||+||+.+..+...... ..+ .+..++.+++.+||++..++.+++
T Consensus 93 ~tv~enl~~~~~~~~~~~---------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-- 137 (241)
T PRK10895 93 LSVYDNLMAVLQIRDDLS---------AEQ------------------------REDRANELMEEFHIEHLRDSMGQS-- 137 (241)
T ss_pred CcHHHHHhhhhhcccccC---------HHH------------------------HHHHHHHHHHHcCCHHHhhcchhh--
Confidence 999999987643211000 000 012346678899998777776655
Q ss_pred cccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeC
Q 000517 340 RRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAE 419 (1449)
Q Consensus 340 ~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~ 419 (1449)
|||||||||+||++++.+|++|+|||||+|||+.++..+.+.|+++.+ .++|+|++.| ...++.+++|++++|++
T Consensus 138 ---LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiii~sH-~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 138 ---LSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGLGVLITDH-NVRETLAVCERAYIVSQ 212 (241)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEEc-CHHHHHHhcCEEEEEeC
Confidence 999999999999999999999999999999999999999999999865 4677777654 45688899999999999
Q ss_pred CeEEEecChhhHH
Q 000517 420 GKIVYHGPQDHVL 432 (1449)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1449)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988764
No 380
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.3e-33 Score=353.70 Aligned_cols=209 Identities=23% Similarity=0.360 Sum_probs=173.8
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccc----cccceEEEEccCCCCCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQE----TFARVSGYCEQTDIHSPN 948 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~----~~~~~~gyv~Q~d~~~~~ 948 (1449)
++.+|+|||+++++||++||+||||||||||+++|+|...+++.+|+|.++|.+.... ..++.+||++|++.+++.
T Consensus 13 ~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 13 GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 3469999999999999999999999999999999999765422489999999875321 134569999999988999
Q ss_pred CCHHHHHHHHHHhccCC-CCChHHHHHHHHHHHHHcCCcccc-cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000517 949 ITVEESVIFSAWLRLAP-EINSKTKAEFVNEVLETIELDAIK-DSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1026 (1449)
Q Consensus 949 lTv~e~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDE 1026 (1449)
+||.||+.+....+... ....+...+.++++++.++|.+.. +..++ .|||||||||+||++|+.+|++|+|||
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~LSgG~~qrv~iA~al~~~p~lllLDE 167 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRPVG-----DYGGGQQQLVEIAKALNKQARLLILDE 167 (500)
T ss_pred CcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCchh-----hCCHHHHHHHHHHHHHhhCCCEEEEeC
Confidence 99999998764322111 112233456788999999997654 44443 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1027 PTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1027 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
||+|||+.+...+.+.|++++++|+|||++||+++ .+.+.+|++++|. +|++++.|+..+
T Consensus 168 Pt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~-~G~i~~~~~~~~ 227 (500)
T TIGR02633 168 PSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIR-DGQHVATKDMST 227 (500)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEe-CCeEeeecCccc
Confidence 99999999999999999999888999999999986 5677899999997 589999998764
No 381
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.5e-33 Score=335.81 Aligned_cols=199 Identities=23% Similarity=0.445 Sum_probs=170.3
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCC-------CCCceEEEEcCCCccCCCCC
Q 000517 189 HVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEF-------VPPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 261 (1449)
|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 899999999999999999999999999999999997 99999999887532 12467999999999999999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+||+.|+..... . .+ .+..++++++.+||++..|+.+++
T Consensus 92 v~enl~~~~~~~~---~---------~~------------------------~~~~~~~~l~~~gL~~~~~~~~~~---- 131 (354)
T TIGR02142 92 VRGNLRYGMKRAR---P---------SE------------------------RRISFERVIELLGIGHLLGRLPGR---- 131 (354)
T ss_pred HHHHHHHHhhccC---h---------hH------------------------HHHHHHHHHHHcCChhHhcCChhh----
Confidence 9999998653210 0 00 011246688999999888888765
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++. |..+++..++|+|++|++|+
T Consensus 132 -LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivt-H~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 132 -LSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVS-HSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEe-cCHHHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999999998765566766654 55678889999999999999
Q ss_pred EEEecChhhHH
Q 000517 422 IVYHGPQDHVL 432 (1449)
Q Consensus 422 iv~~G~~~~~~ 432 (1449)
++..|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999988874
No 382
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.7e-34 Score=332.90 Aligned_cols=212 Identities=24% Similarity=0.409 Sum_probs=179.4
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++++|++++++.+ ..++|+|+|+++++||.+||+|+||||||||+..|+|...+ .+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~--~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDP--QQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCC--CCCeeeECCcCh
Confidence 67888988877543 34699999999999999999999999999999999997654 589999999875
Q ss_pred c---cccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccc-------cccccCCC
Q 000517 928 V---QETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIK-------DSLVGIPG 997 (1449)
Q Consensus 928 ~---~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~~ 997 (1449)
. ++.+++.+++++|...+| .-|+++||.++ +++ ..++.+.++++.+||++.. |+.+|..|
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF-~~Tlr~NL~lA-----~~~----AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G 472 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLF-SGTLRDNLRLA-----NPD----ASDEELWAALQQVGLEKLLESAPDGLNTWLGEGG 472 (573)
T ss_pred hhCChhhHHHHHhhhccchHHH-HHHHHHHHhhc-----CCC----CCHHHHHHHHHHcCHHHHHHhChhhhhchhccCC
Confidence 3 344677899999987665 56999999764 122 2346688999999998754 45677655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
+.||||||||++|||+|++|.++++|||||.|||+.+.++|++.|.+-++ |+|+|++||+.. -.+.||+|++|+ +
T Consensus 473 -~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~-~ 547 (573)
T COG4987 473 -RRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLD-N 547 (573)
T ss_pred -CcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEE-C
Confidence 46999999999999999999999999999999999999999999998764 999999999975 468899999997 6
Q ss_pred cEEEEecCCC
Q 000517 1078 GRIIYCGPLG 1087 (1449)
Q Consensus 1078 G~~v~~G~~~ 1087 (1449)
|++++.|..+
T Consensus 548 Gkiie~G~~~ 557 (573)
T COG4987 548 GKIIEEGTHA 557 (573)
T ss_pred CeeeecCCHH
Confidence 9999999864
No 383
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-34 Score=288.80 Aligned_cols=212 Identities=23% Similarity=0.321 Sum_probs=179.8
Q ss_pred hccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc-------------c--
Q 000517 865 RERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV-------------Q-- 929 (1449)
Q Consensus 865 ~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~-------------~-- 929 (1449)
.+..+.++...+|++||++.++|+.+.|+|.|||||||+|+||.-..+| ..|.|.+||..+. .
T Consensus 10 ~dlHK~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P--~~G~I~v~geei~~k~~~~G~l~~ad~~q 87 (256)
T COG4598 10 EDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SAGSIRVNGEEIRLKRDKDGQLKPADKRQ 87 (256)
T ss_pred hHHHhhcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCC--CCceEEECCeEEEeeeCCCCCeeeCCHHH
Confidence 3444567778899999999999999999999999999999999876555 5899999996531 0
Q ss_pred -ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHH
Q 000517 930 -ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKR 1008 (1449)
Q Consensus 930 -~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1008 (1449)
...|...|+|+|+-.++..+||.||+.-+-..- ...++.+..++.+..|..+|+.+.+|.... .|||||+||
T Consensus 88 ~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhV--Lg~~k~ea~e~Ae~~L~kVGi~ek~~~YP~-----~LSGGQQQR 160 (256)
T COG4598 88 LQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHV--LGVSKAEAIERAEKYLAKVGIAEKADAYPA-----HLSGGQQQR 160 (256)
T ss_pred HHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHh--hcCCHHHHHHHHHHHHHHhCchhhhhcCcc-----ccCchHHHH
Confidence 124556899999999999999999997543211 134566777889999999999998887643 799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1009 LTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1009 l~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
++|||||+.+|+++++|||||.|||+-.-++.+.+++++++|+|.+++||.... ..+...+++.|. +|.+-+.||+.
T Consensus 161 ~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh-~G~iEE~G~P~ 237 (256)
T COG4598 161 VAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLH-QGKIEEEGPPE 237 (256)
T ss_pred HHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEee-cceecccCChH
Confidence 999999999999999999999999999999999999999999999999998764 445678899997 58999999984
No 384
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=327.87 Aligned_cols=205 Identities=23% Similarity=0.368 Sum_probs=169.5
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC-------CCceEEEEcCCCc-
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV-------PPKTSAYISQNDL- 255 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~- 255 (1449)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 35999999999999999999999999999999999999998 999999998875321 1346899999862
Q ss_pred cCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC-cccccc
Q 000517 256 HIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD-VCADTM 334 (1449)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 334 (1449)
.+..+||+||+.|+....+.. +.+ ....++.+++.+||. ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS----------EDE------------------------AKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC----------HHH------------------------HHHHHHHHHHHcCCChhHhhCC
Confidence 344689999998865432110 000 011346688999997 567777
Q ss_pred ccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeE
Q 000517 335 VGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDI 414 (1449)
Q Consensus 335 vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v 414 (1449)
+++ |||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .+.|+|++ +|..+++.++||++
T Consensus 143 ~~~-----LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~g~tvliv-sH~~~~~~~~~d~v 215 (287)
T PRK13641 143 PFE-----LSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-AGHTVILV-THNMDDVAEYADDV 215 (287)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEE-eCCHHHHHHhCCEE
Confidence 766 999999999999999999999999999999999999999999999864 46666664 56678889999999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000517 415 ILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~ 432 (1449)
++|++|++++.|+++++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 385
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.7e-33 Score=323.68 Aligned_cols=204 Identities=25% Similarity=0.388 Sum_probs=170.5
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc------ccccceEEEEccCC--CC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ------ETFARVSGYCEQTD--IH 945 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~------~~~~~~~gyv~Q~d--~~ 945 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++ .+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 102 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESP--SQGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISAV 102 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccccChhHHHHHHhcEEEEEcChhhcc
Confidence 5699999999999999999999999999999999997654 58999999986532 12456799999997 35
Q ss_pred CCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 946 SPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 946 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
.+..|+.|++.+..... .........+.++++++.+|+. +..++.+ ..||||||||++|||+|+.+|++|+|
T Consensus 103 ~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-----~~LS~Ge~qrl~laral~~~p~lllL 175 (268)
T PRK10419 103 NPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKRP-----PQLSGGQLQRVCLARALAVEPKLLIL 175 (268)
T ss_pred CCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCCC-----ccCChHHHHHHHHHHHHhcCCCEEEE
Confidence 67899999987643211 1122334456789999999996 4566654 37999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
||||+|||+.+...+.+.|++++++ |.|||+++|++. ++.+.+|++++|. +|++++.|+..+
T Consensus 176 DEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~-~G~i~~~g~~~~ 238 (268)
T PRK10419 176 DEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMD-NGQIVETQPVGD 238 (268)
T ss_pred eCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEE-CCEEeeeCChhh
Confidence 9999999999999999999998765 899999999986 5667899999997 589999998753
No 386
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1e-33 Score=359.99 Aligned_cols=208 Identities=29% Similarity=0.465 Sum_probs=170.9
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1449)
+++|+|+|+.++|||.+||+||||||||||+++|.|.++|+ +|+|.+||+++++... ++.++||+|++.+|. .
T Consensus 342 ~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~-~ 417 (567)
T COG1132 342 KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS-G 417 (567)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-c
Confidence 46999999999999999999999999999999999999997 9999999999887654 578999999888777 8
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||+|||.++.. +.+.++..+++...+ .++.+. .++++.||.||+. .
T Consensus 418 TI~~NI~~g~~-------------------------~at~eei~~a~k~a~------~~d~I~--~lp~g~dt~vge~-G 463 (567)
T COG1132 418 TIRENIALGRP-------------------------DATDEEIEEALKLAN------AHEFIA--NLPDGYDTIVGER-G 463 (567)
T ss_pred cHHHHHhcCCC-------------------------CCCHHHHHHHHHHhC------hHHHHH--hCcccccceecCC-C
Confidence 99999998631 111122233332221 122223 3588899999953 4
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
..||||||||++||||++.+|++|+||||||+||+.+...|.+.++++. .++|+++..|++ + +...+|+|++|++|
T Consensus 464 ~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~iiIaHRl-s-ti~~aD~IiVl~~G 539 (567)
T COG1132 464 VNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLIIAHRL-S-TIKNADRIIVLDNG 539 (567)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEEEeccH-h-HHHhCCEEEEEECC
Confidence 4599999999999999999999999999999999999999999999776 357888855544 3 44559999999999
Q ss_pred eEEEecChhhHHH
Q 000517 421 KIVYHGPQDHVLA 433 (1449)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1449)
++++.|+++++..
T Consensus 540 ~i~e~G~h~eLl~ 552 (567)
T COG1132 540 RIVERGTHEELLA 552 (567)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999975
No 387
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=6.9e-34 Score=369.08 Aligned_cols=208 Identities=26% Similarity=0.370 Sum_probs=176.9
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++++|++|+++. .++.+|+|+|++|+|||.+||+|+||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 451 ~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~i 517 (686)
T TIGR03797 451 AIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP--ESGSVFYDGQDL 517 (686)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEc
Confidence 5889999988742 124699999999999999999999999999999999998765 589999999886
Q ss_pred c---cccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000517 928 V---QETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI-------KDSLVGIPG 997 (1449)
Q Consensus 928 ~---~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 997 (1449)
. ...+|+.+|||+|++.+++ -|++||+.++. + .+ ++.++++++..++.+. .|+.+|..|
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G 586 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEGG 586 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCCC
Confidence 4 3567889999999998875 59999998641 1 12 3456777887777643 477787665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
..||||||||++|||||+++|+||+||||||+||+.+.+.+++.|+++ ++|+|+++|+++ ..+.+|++++|+ +
T Consensus 587 -~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~-~ 659 (686)
T TIGR03797 587 -GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLD-A 659 (686)
T ss_pred -CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEE-C
Confidence 469999999999999999999999999999999999999999999886 689999999975 567899999998 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|++++.|+.
T Consensus 660 G~iv~~G~~ 668 (686)
T TIGR03797 660 GRVVQQGTY 668 (686)
T ss_pred CEEEEECCH
Confidence 899999985
No 388
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=322.46 Aligned_cols=214 Identities=21% Similarity=0.270 Sum_probs=172.8
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 924 (1449)
.+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 20 ~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 86 (274)
T PRK14265 20 VFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRD 86 (274)
T ss_pred eEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECC
Confidence 577788876542 246999999999999999999999999999999999975321 2479999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc----ccccccccC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD----AIKDSLVGI 995 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 995 (1449)
.+... ..+++.++|++|+..+++. ||.||+.+....+. .. ...++.+++.++.+++. +..+..
T Consensus 87 ~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 158 (274)
T PRK14265 87 RNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKEK--- 158 (274)
T ss_pred EecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcCC---
Confidence 87531 2345689999999887764 99999987643321 11 12234567778888874 223333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
+..||||||||++|||||+.+|++|||||||+|||+.+...+.+.|+++++ ++|||+++|+++ .+.+.+|++++|+
T Consensus 159 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 234 (274)
T PRK14265 159 --GTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFN 234 (274)
T ss_pred --cccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEe
Confidence 347999999999999999999999999999999999999999999999865 799999999986 5778899999997
Q ss_pred --------cCcEEEEecCC
Q 000517 1076 --------TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 --------~gG~~v~~G~~ 1086 (1449)
+.|++++.|++
T Consensus 235 ~~~~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 235 TEIDEYGKRRGKLVEFSPT 253 (274)
T ss_pred cccccccccCceEEEeCCH
Confidence 26899999986
No 389
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=1.2e-33 Score=308.55 Aligned_cols=179 Identities=24% Similarity=0.338 Sum_probs=151.2
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-----ccccceEEEEccCCC-CC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-----ETFARVSGYCEQTDI-HS 946 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-----~~~~~~~gyv~Q~d~-~~ 946 (1449)
++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++. ..
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRP--QSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 34699999999999999999999999999999999998664 58999999987531 134567999999973 33
Q ss_pred CCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000517 947 PNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDE 1026 (1449)
Q Consensus 947 ~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDE 1026 (1449)
...||+||+.+..... ....+...+.++++++.++|.+..++.++ .||||||||++|||||+.+|++|+|||
T Consensus 82 ~~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llllDE 153 (190)
T TIGR01166 82 FAADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPTH-----CLSGGEKKRVAIAGAVAMRPDVLLLDE 153 (190)
T ss_pred ccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 3579999998865432 12333445678899999999887777654 799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCcc
Q 000517 1027 PTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPS 1061 (1449)
Q Consensus 1027 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~ 1061 (1449)
||+|||+.+...+.+.|++++++|+|||+++|++.
T Consensus 154 Pt~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 154 PTAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred CcccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999999877999999999974
No 390
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-33 Score=323.32 Aligned_cols=209 Identities=25% Similarity=0.390 Sum_probs=170.7
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1449)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|+..+++.+|
T Consensus 25 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 101 (265)
T PRK10575 25 TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMT 101 (265)
T ss_pred EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCcc
Confidence 5899999999999999999999999999999999999987 9999999987654321 356999999988889999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|.||+.++.... .... +. .. + ..+..++.+++.+||++..++.+++
T Consensus 102 v~e~l~~~~~~~-~~~~--------------~~-~~-~-------------~~~~~~~~~l~~~~l~~~~~~~~~~---- 147 (265)
T PRK10575 102 VRELVAIGRYPW-HGAL--------------GR-FG-A-------------ADREKVEEAISLVGLKPLAHRLVDS---- 147 (265)
T ss_pred HHHHHHhCcccc-cccc--------------cC-CC-H-------------HHHHHHHHHHHHcCCHHHhcCCccc----
Confidence 999998753110 0000 00 00 0 0011246688999998777888775
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++. |..+++.+++|+|++|++|+
T Consensus 148 -LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~s-H~~~~i~~~~d~i~~l~~G~ 225 (265)
T PRK10575 148 -LSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVL-HDINMAARYCDYLVALRGGE 225 (265)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECCe
Confidence 9999999999999999999999999999999999999999999998764466766655 55668889999999999999
Q ss_pred EEEecChhhHH
Q 000517 422 IVYHGPQDHVL 432 (1449)
Q Consensus 422 iv~~G~~~~~~ 432 (1449)
++..|+.+++.
T Consensus 226 i~~~~~~~~~~ 236 (265)
T PRK10575 226 MIAQGTPAELM 236 (265)
T ss_pred EEEecCHHHhc
Confidence 99999887653
No 391
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=320.08 Aligned_cols=214 Identities=22% Similarity=0.306 Sum_probs=171.3
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCC--CC-eeEEEEEEcCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKT--SG-YVEGEIKISGY 925 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~I~i~G~ 925 (1449)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... +. ..+|+|.++|.
T Consensus 6 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~ 72 (252)
T PRK14255 6 ITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQ 72 (252)
T ss_pred EEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCE
Confidence 56777765442 2469999999999999999999999999999999999643 21 14799999998
Q ss_pred cCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000517 926 PKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD----AIKDSLVGIP 996 (1449)
Q Consensus 926 ~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~~ 996 (1449)
+... ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.+.+.++.+++. +..+..
T Consensus 73 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~~---- 145 (252)
T PRK14255 73 NIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHES---- 145 (252)
T ss_pred EcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhcC----
Confidence 7531 234567999999988887 6999999886543321 11222334567788888764 223333
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 997 GVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 997 ~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ .+.+.+|++++|+
T Consensus 146 -~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~- 221 (252)
T PRK14255 146 -ALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFL- 221 (252)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEE-
Confidence 347999999999999999999999999999999999999999999999865 589999999986 5778899999997
Q ss_pred CcEEEEecCC
Q 000517 1077 GGRIIYCGPL 1086 (1449)
Q Consensus 1077 gG~~v~~G~~ 1086 (1449)
+|+++..|+.
T Consensus 222 ~G~i~~~~~~ 231 (252)
T PRK14255 222 TGNLIEFADT 231 (252)
T ss_pred CCEEEEeCCH
Confidence 5899999875
No 392
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.2e-33 Score=314.38 Aligned_cols=196 Identities=22% Similarity=0.330 Sum_probs=163.1
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC------CCceEEEEcCCCccC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV------PPKTSAYISQNDLHI 257 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1449)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 35899999999999999999999999999999999999987 999999998875432 135789999998888
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGN 337 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 337 (1449)
+.+||+||+.+.....+... .+ ....++.+++.+||.+..++.+++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 137 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGASG----------DD------------------------IRRRVSAALDKVGLLDKAKNFPIQ 137 (222)
T ss_pred ccccHHHHHHhHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCChhhhhCCchh
Confidence 99999999988654322100 00 001235678889998777777665
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++ +|..+++...+|+|++|
T Consensus 138 -----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~-sH~~~~~~~~~d~i~~l 210 (222)
T PRK10908 138 -----LSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-VGVTVLMA-THDIGLISRRSYRMLTL 210 (222)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CCCEEEEE-eCCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999865 35666655 55667888899999999
Q ss_pred eCCeEE
Q 000517 418 AEGKIV 423 (1449)
Q Consensus 418 ~~G~iv 423 (1449)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999985
No 393
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.1e-33 Score=315.15 Aligned_cols=195 Identities=24% Similarity=0.400 Sum_probs=163.1
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC------CCceEEEEcCCCccC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV------PPKTSAYISQNDLHI 257 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1449)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 35899999999999999999999999999999999999987 999999998875432 135699999999999
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGN 337 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 337 (1449)
+.+||+||+.+.....+.. . .+ .+..++.+++.+||++..++.+++
T Consensus 91 ~~~t~~~~l~~~~~~~~~~-~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 136 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP-P---------RE------------------------IRKRVPAALELVGLSHKHRALPAE 136 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC-H---------HH------------------------HHHHHHHHHHHcCCHHHhhCChhh
Confidence 9999999999875432210 0 00 011245678899998877877765
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++. |..+++.+++|++++|
T Consensus 137 -----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~tiiivt-H~~~~~~~~~d~i~~l 209 (214)
T cd03292 137 -----LSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-AGTTVVVAT-HAKELVDTTRHRVIAL 209 (214)
T ss_pred -----cCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-cCCEEEEEe-CCHHHHHHhCCEEEEE
Confidence 999999999999999999999999999999999999999999999865 466766655 4567788899999999
Q ss_pred eCCeE
Q 000517 418 AEGKI 422 (1449)
Q Consensus 418 ~~G~i 422 (1449)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 394
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=325.12 Aligned_cols=203 Identities=27% Similarity=0.369 Sum_probs=169.3
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCc-cCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDL-HIAE 259 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~-~~~~ 259 (1449)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .+..
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 16 PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 4899999999999999999999999999999999999987 9999999998754321 356999999865 4677
Q ss_pred CCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccc
Q 000517 260 MTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAM 339 (1449)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 339 (1449)
.||+||+.|.....+.. +.+ .+..++.+++.+||.+..++.+++
T Consensus 93 ~tv~enl~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gl~~~~~~~~~~-- 136 (274)
T PRK13644 93 RTVEEDLAFGPENLCLP----------PIE------------------------IRKRVDRALAEIGLEKYRHRSPKT-- 136 (274)
T ss_pred chHHHHHHhhHHHcCCC----------HHH------------------------HHHHHHHHHHHCCCHHHhcCCccc--
Confidence 89999998865432110 000 011246678999998888887765
Q ss_pred cccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeC
Q 000517 340 RRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAE 419 (1449)
Q Consensus 340 ~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~ 419 (1449)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++.|+ ..++ ..+|+|++|++
T Consensus 137 ---LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g~til~~tH~-~~~~-~~~d~v~~l~~ 210 (274)
T PRK13644 137 ---LSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-KGKTIVYITHN-LEEL-HDADRIIVMDR 210 (274)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCCEEEEEecC-HHHH-hhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999875 46777776555 4566 56999999999
Q ss_pred CeEEEecChhhHH
Q 000517 420 GKIVYHGPQDHVL 432 (1449)
Q Consensus 420 G~iv~~G~~~~~~ 432 (1449)
|++++.|+.+++.
T Consensus 211 G~i~~~g~~~~~~ 223 (274)
T PRK13644 211 GKIVLEGEPENVL 223 (274)
T ss_pred CEEEEECCHHHHh
Confidence 9999999988764
No 395
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=2.3e-33 Score=318.99 Aligned_cols=198 Identities=25% Similarity=0.372 Sum_probs=168.7
Q ss_pred eeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCCCCCCCCHH
Q 000517 876 LLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSPNITVE 952 (1449)
Q Consensus 876 iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~ 952 (1449)
+|+|+||++++||+++|+|+||||||||+++|+|... .+|+|.++|.+... ..+++.++|++|++.+++.+|+.
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999763 27999999987532 23445689999998888889999
Q ss_pred HHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhh-------CCCEEEEe
Q 000517 953 ESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVA-------NPSIIFMD 1025 (1449)
Q Consensus 953 e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~-------~p~illLD 1025 (1449)
||+.+.... ........+.++++++.++|.+..++.++ .||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRSVN-----QLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCCcc-----cCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875211 11223335678899999999877777654 799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1026 EPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1026 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
|||+|||+.++..+.+.|++++++|+|||+++|+++ ++...+|++++|. +|++++.|+.+
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~-~G~i~~~g~~~ 218 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLK-QGKLLASGRRD 218 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEEECCHH
Confidence 999999999999999999999877999999999976 5778899999997 58999999864
No 396
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=323.48 Aligned_cols=219 Identities=21% Similarity=0.293 Sum_probs=176.0
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 924 (1449)
.+.++|++++++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 467777776552 346999999999999999999999999999999999976531 3589999999
Q ss_pred ccCcc----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCC
Q 000517 925 YPKVQ----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNG 1000 (1449)
Q Consensus 925 ~~~~~----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 1000 (1449)
.++.. ..+++.++|++|++.+++ .|++||+.+...... ....++..+.+.++++.++|.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87532 234667999999988887 899999987643221 12233444566788999998753222111 12347
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEE
Q 000517 1001 LSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRI 1080 (1449)
Q Consensus 1001 LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~ 1080 (1449)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|. +|++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~-~G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFF-DGRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEE-CCEE
Confidence 999999999999999999999999999999999999999999999876 589999999986 5778899999998 5899
Q ss_pred EEecCC
Q 000517 1081 IYCGPL 1086 (1449)
Q Consensus 1081 v~~G~~ 1086 (1449)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 999885
No 397
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.8e-33 Score=315.26 Aligned_cols=197 Identities=26% Similarity=0.368 Sum_probs=168.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCCCHH
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMTVR 263 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 263 (1449)
.++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 35899999999999999999999999999999999999987 999999998765322 35799999999889999999
Q ss_pred HHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccC
Q 000517 264 ETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGI 343 (1449)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGl 343 (1449)
||+.+.....+.. +..+..+++.+||++..|+.+++ |
T Consensus 89 ~~~~~~~~~~~~~--------------------------------------~~~~~~~l~~~~l~~~~~~~~~~-----L 125 (223)
T TIGR03740 89 ENLKVHTTLLGLP--------------------------------------DSRIDEVLNIVDLTNTGKKKAKQ-----F 125 (223)
T ss_pred HHHHHHHHHcCCC--------------------------------------HHHHHHHHHHcCCcHHHhhhHhh-----C
Confidence 9998765432100 01235578899998877877765 9
Q ss_pred ChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEE
Q 000517 344 SGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIV 423 (1449)
Q Consensus 344 SGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv 423 (1449)
|||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++.|+ ..++.+.+|++++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~~tiii~sH~-~~~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QGITVILSSHI-LSEVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEcCC-HHHHHHhcCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999999865 46777776554 56788999999999999999
Q ss_pred EecChh
Q 000517 424 YHGPQD 429 (1449)
Q Consensus 424 ~~G~~~ 429 (1449)
+.|++.
T Consensus 204 ~~~~~~ 209 (223)
T TIGR03740 204 YQGKIN 209 (223)
T ss_pred EecChh
Confidence 999864
No 398
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=352.65 Aligned_cols=208 Identities=24% Similarity=0.338 Sum_probs=175.1
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc----ccccceEEEEccCCCCCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ----ETFARVSGYCEQTDIHSPN 948 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d~~~~~ 948 (1449)
++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.
T Consensus 10 ~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 10 GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQK--DSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 35699999999999999999999999999999999998655 48999999987532 2235679999999988899
Q ss_pred CCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000517 949 ITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1028 (1449)
Q Consensus 949 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPT 1028 (1449)
+||+||+.+............+...+.++++++.+++.+..++.++ .|||||||||+||++|+.+|++|+|||||
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgGq~qrv~lA~al~~~p~lllLDEPt 162 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKVA-----TLSVSQMQMIEIAKAFSYNAKIVIMDEPT 162 (491)
T ss_pred CCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCchh-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 9999999875321111011223344678899999999877777654 79999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCCC
Q 000517 1029 TGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGKH 1089 (1449)
Q Consensus 1029 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~~ 1089 (1449)
+|||+.++..+.+.|+++++.|+|||+++|+++ ++...+|++++|. +|+++..|+..+.
T Consensus 163 ~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~-~G~i~~~~~~~~~ 221 (491)
T PRK10982 163 SSLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILR-DGQWIATQPLAGL 221 (491)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEE-CCEEEeecChhhC
Confidence 999999999999999999888999999999986 5677899999998 5899999987653
No 399
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.6e-31 Score=346.21 Aligned_cols=210 Identities=23% Similarity=0.392 Sum_probs=175.8
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++++|++|+++. ++.+|+|+|++|+|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+.
T Consensus 473 ~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p--~~G~I~idg~~i 538 (708)
T TIGR01193 473 DIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQA--RSGEILLNGFSL 538 (708)
T ss_pred cEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCC--CCcEEEECCEEH
Confidence 5889999987641 23599999999999999999999999999999999998765 589999999875
Q ss_pred c---cccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000517 928 V---QETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-------IKDSLVGIPG 997 (1449)
Q Consensus 928 ~---~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 997 (1449)
. ...+|+.+|||+|++.+++ .|++|||.++. .++.+ ++.++++++..++.+ -.|+.+|..|
T Consensus 539 ~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~l~~----~~~~~----~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G 609 (708)
T TIGR01193 539 KDIDRHTLRQFINYLPQEPYIFS-GSILENLLLGA----KENVS----QDEIWAACEIAEIKDDIENMPLGYQTELSEEG 609 (708)
T ss_pred HHcCHHHHHHheEEEecCceehh-HHHHHHHhccC----CCCCC----HHHHHHHHHHhCCHHHHHhcccccCcEecCCC
Confidence 3 3567889999999998875 59999998742 11222 234566666666543 3577888655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
.+||||||||++||||++++|+||+||||||+||+.+...+++.|+++ +|+|+|+++|+++ ..+.+|++++|+ +
T Consensus 610 -~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~-~ 683 (708)
T TIGR01193 610 -SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLD-H 683 (708)
T ss_pred -CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEE-C
Confidence 469999999999999999999999999999999999999999999985 5899999999985 567899999998 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|++++.|+.
T Consensus 684 G~i~~~G~~ 692 (708)
T TIGR01193 684 GKIIEQGSH 692 (708)
T ss_pred CEEEEECCH
Confidence 899999985
No 400
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=359.20 Aligned_cols=209 Identities=24% Similarity=0.386 Sum_probs=172.0
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1449)
.++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 35999999999999999999999999999999999999998 9999999999876543 467999999988775 7
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
|++|||.++.. . +.+.+++.+++...+.. +.++ .|++..||.+|+. .
T Consensus 432 Ti~~Ni~~~~~----~--------------------~~~~~~i~~al~~~~l~------~~i~--~lp~Gldt~ig~~-g 478 (582)
T PRK11176 432 TIANNIAYART----E--------------------QYSREQIEEAARMAYAM------DFIN--KMDNGLDTVIGEN-G 478 (582)
T ss_pred hHHHHHhcCCC----C--------------------CCCHHHHHHHHHHhCcH------HHHH--hcccccCceeCCC-C
Confidence 99999987421 0 11223333333333322 2222 2678889999975 4
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
+.||||||||++|||||+++|++++||||||+||+.++..+.+.|+++. .++|+|+..|++ +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~~~tvI~VtHr~--~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ--KNRTSLVIAHRL--STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEEEecch--HHHHhCCEEEEEECC
Confidence 5699999999999999999999999999999999999999999999874 367888777665 567889999999999
Q ss_pred eEEEecChhhHHH
Q 000517 421 KIVYHGPQDHVLA 433 (1449)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1449)
+++..|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999998864
No 401
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=3.5e-33 Score=315.57 Aligned_cols=205 Identities=23% Similarity=0.411 Sum_probs=173.0
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCCHH
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMTVR 263 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 263 (1449)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|++
T Consensus 14 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 14 QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 5999999999999999999999999999999999999987 9999999988764332 45799999999888999999
Q ss_pred HHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccC
Q 000517 264 ETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGI 343 (1449)
Q Consensus 264 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGl 343 (1449)
||+.+.....+... .+ ....++.+++.+|+....++.+++ |
T Consensus 91 enl~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----l 131 (237)
T TIGR00968 91 DNIAFGLEIRKHPK----------AK------------------------IKARVEELLELVQLEGLGDRYPNQ-----L 131 (237)
T ss_pred HHHHhHHHhcCCCH----------HH------------------------HHHHHHHHHHHcCCHhHhhCChhh-----C
Confidence 99988654321100 00 001245678889998777777765 9
Q ss_pred ChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEE
Q 000517 344 SGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIV 423 (1449)
Q Consensus 344 SGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv 423 (1449)
|||||||++||++++.+|++++|||||+|||..+...+.+.|++++...++|+|++.|+ ..++.+++|++++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~-~~~~~~~~d~i~~l~~g~i~ 210 (237)
T TIGR00968 132 SGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHD-QEEAMEVADRIVVMSNGKIE 210 (237)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCC-HHHHHhhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999876446788777655 46788999999999999999
Q ss_pred EecChhhHH
Q 000517 424 YHGPQDHVL 432 (1449)
Q Consensus 424 ~~G~~~~~~ 432 (1449)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (237)
T TIGR00968 211 QIGSPDEVY 219 (237)
T ss_pred EecCHHHHH
Confidence 999988774
No 402
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=296.01 Aligned_cols=213 Identities=25% Similarity=0.395 Sum_probs=183.8
Q ss_pred ccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc---cccccceEEEEccC
Q 000517 866 ERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV---QETFARVSGYCEQT 942 (1449)
Q Consensus 866 ~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~---~~~~~~~~gyv~Q~ 942 (1449)
+.++.++++.+|+|+|..|++|.+++|+|||||||||||.++++.... .+|+|.++|.+.. .+.+.+.++..-|+
T Consensus 6 nv~K~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~~--d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~ 83 (252)
T COG4604 6 NVSKSYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLKK--DSGEITIDGLELTSTPSKELAKKLSILKQE 83 (252)
T ss_pred hhhHhhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhccc--cCceEEEeeeecccCChHHHHHHHHHHHhh
Confidence 344456778899999999999999999999999999999999986654 5899999998854 34577778888999
Q ss_pred CCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000517 943 DIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSII 1022 (1449)
Q Consensus 943 d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~il 1022 (1449)
......+||+|-+.|+..-.. .....++.+..+++.++.++|+++.|+... +||||||||.-||..++++.+.+
T Consensus 84 N~i~~rlTV~dLv~FGRfPYS-qGRlt~eD~~~I~~aieyl~L~~l~dryLd-----~LSGGQrQRAfIAMVlaQdTdyv 157 (252)
T COG4604 84 NHINSRLTVRDLVGFGRFPYS-QGRLTKEDRRIINEAIEYLHLEDLSDRYLD-----ELSGGQRQRAFIAMVLAQDTDYV 157 (252)
T ss_pred chhhheeEHHHHhhcCCCccc-CCCCchHHHHHHHHHHHHhcccchHHHhHH-----hcccchhhhhhhheeeeccCcEE
Confidence 888889999999999732211 222345667789999999999999999864 79999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1023 FMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1023 lLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
+||||.++||...+..+|+.||+++++ |+|||++.||.+. ...+.|+++-|+ +|+++..|++++
T Consensus 158 lLDEPLNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK-~G~vv~~G~~~e 222 (252)
T COG4604 158 LLDEPLNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALK-NGKVVKQGSPDE 222 (252)
T ss_pred EecCcccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeec-CCEEEecCCHHH
Confidence 999999999999999999999999876 9999999999875 445689999998 599999999864
No 403
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-33 Score=326.29 Aligned_cols=205 Identities=23% Similarity=0.347 Sum_probs=166.7
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCC----C----CCCceEEEEcCCCc-
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEE----F----VPPKTSAYISQNDL- 255 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~----~----~~~~~~~yv~Q~d~- 255 (1449)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 5899999999999999999999999999999999999987 9999999987642 1 12457999999863
Q ss_pred cCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC-cccccc
Q 000517 256 HIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD-VCADTM 334 (1449)
Q Consensus 256 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 334 (1449)
.+...||+||+.|+....+.. ..+ ....++.+++.+||+ +..++.
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~----------~~~------------------------~~~~~~~ll~~~~L~~~~~~~~ 147 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGEN----------KQE------------------------AYKKVPELLKLVQLPEDYVKRS 147 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCC----------HHH------------------------HHHHHHHHHHHcCCChhHhcCC
Confidence 233469999998865322110 000 001245678889995 566777
Q ss_pred ccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeE
Q 000517 335 VGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDI 414 (1449)
Q Consensus 335 vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v 414 (1449)
+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..++|+|++. |..+++.++||++
T Consensus 148 ~~~-----LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiis-H~~~~~~~~~d~i 221 (289)
T PRK13645 148 PFE-----LSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVT-HNMDQVLRIADEV 221 (289)
T ss_pred hhh-----CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-cCHHHHHHhCCEE
Confidence 665 9999999999999999999999999999999999999999999998764466766654 5566888999999
Q ss_pred EEEeCCeEEEecChhhHH
Q 000517 415 ILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 415 ~lL~~G~iv~~G~~~~~~ 432 (1449)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 404
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-33 Score=316.01 Aligned_cols=204 Identities=25% Similarity=0.415 Sum_probs=172.7
Q ss_pred cccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC-CCceEEEEcCCCccCCCCCHHH
Q 000517 186 ILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV-PPKTSAYISQNDLHIAEMTVRE 264 (1449)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 264 (1449)
+|+|+|++++|||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999997 999999998876532 2457999999999999999999
Q ss_pred HHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCC
Q 000517 265 TVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGIS 344 (1449)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlS 344 (1449)
|+.++....+... .+ .+..+..+++.+||.+..++.+.+ ||
T Consensus 91 ~l~~~~~~~~~~~----------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-----LS 131 (235)
T cd03299 91 NIAYGLKKRKVDK----------KE------------------------IERKVLEIAEMLGIDHLLNRKPET-----LS 131 (235)
T ss_pred HHHHHHHHcCCCH----------HH------------------------HHHHHHHHHHHcCChhHHhcCccc-----CC
Confidence 9988653321100 00 011245678889998888888765 99
Q ss_pred hhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEE
Q 000517 345 GGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVY 424 (1449)
Q Consensus 345 GGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~ 424 (1449)
||||||++||+|++.+|++++|||||+|||+.++..+.+.|++++...+.|++++.|+ .+++.+.+|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~-~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHD-FEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecC-HHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999876557787776655 567888999999999999999
Q ss_pred ecChhhHH
Q 000517 425 HGPQDHVL 432 (1449)
Q Consensus 425 ~G~~~~~~ 432 (1449)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987764
No 405
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.5e-33 Score=366.47 Aligned_cols=208 Identities=27% Similarity=0.485 Sum_probs=174.3
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1449)
.++|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|. .
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~-~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFY-G 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhhhh-h
Confidence 35899999999999999999999999999999999999998 9999999999877654 578999999887776 6
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
|++|||.++. |+.+.+++.+++...+.. +.++ .|++..||.+|+. .
T Consensus 554 TI~eNi~~~~-------------------------~~~~~~~i~~a~~~~~l~------~~i~--~lp~gl~T~i~e~-G 599 (694)
T TIGR03375 554 TLRDNIALGA-------------------------PYADDEEILRAAELAGVT------EFVR--RHPDGLDMQIGER-G 599 (694)
T ss_pred hHHHHHhCCC-------------------------CCCCHHHHHHHHHHcChH------HHHH--hCcccccceecCC-C
Confidence 9999998742 122333444444444332 2222 3788899999974 4
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
..||||||||++||||++.+|++++||||||+||+.+...|.+.|+++. .++|+|+..|++ ++.+.||+|++|++|
T Consensus 600 ~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~--~~~T~iiItHrl--~~~~~~D~iivl~~G 675 (694)
T TIGR03375 600 RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL--AGKTLVLVTHRT--SLLDLVDRIIVMDNG 675 (694)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCCEEEEEecCH--HHHHhCCEEEEEeCC
Confidence 5699999999999999999999999999999999999999999999875 367888877765 467899999999999
Q ss_pred eEEEecChhhHHH
Q 000517 421 KIVYHGPQDHVLA 433 (1449)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1449)
+++++|+++++++
T Consensus 676 ~i~e~G~~~eLl~ 688 (694)
T TIGR03375 676 RIVADGPKDQVLE 688 (694)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999999875
No 406
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-33 Score=317.36 Aligned_cols=208 Identities=24% Similarity=0.343 Sum_probs=167.1
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCeeeEEEECCccCCCCC---CCceEEEEcCCCccCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPS--LKVTGEVSYNGYKLEEFV---PPKTSAYISQNDLHIAE 259 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 259 (1449)
++|+|+|+++++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~ 96 (250)
T PRK14247 17 EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPN 96 (250)
T ss_pred eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCC
Confidence 5899999999999999999999999999999999998741 113899999998875432 24579999999888999
Q ss_pred CCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc----cccccc
Q 000517 260 MTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV----CADTMV 335 (1449)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~dt~v 335 (1449)
+||+||+.++....+.... ..+ ....++.+++.+||.+ ..|+.+
T Consensus 97 ~tv~enl~~~~~~~~~~~~--------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~~~ 144 (250)
T PRK14247 97 LSIFENVALGLKLNRLVKS--------KKE------------------------LQERVRWALEKAQLWDEVKDRLDAPA 144 (250)
T ss_pred CcHHHHHHHHHHhccccCC--------HHH------------------------HHHHHHHHHHHcCCCcchhhhhcCCc
Confidence 9999999987543211000 000 0112456788888853 345555
Q ss_pred cccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEE
Q 000517 336 GNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDII 415 (1449)
Q Consensus 336 g~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~ 415 (1449)
++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++. |..+++.+.+|+++
T Consensus 145 ~~-----LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~s-H~~~~~~~~~d~i~ 216 (250)
T PRK14247 145 GK-----LSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK--DMTIVLVT-HFPQQAARISDYVA 216 (250)
T ss_pred cc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEe-CCHHHHHHhcCEEE
Confidence 44 999999999999999999999999999999999999999999999853 56666654 55667889999999
Q ss_pred EEeCCeEEEecChhhHH
Q 000517 416 LMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 416 lL~~G~iv~~G~~~~~~ 432 (1449)
+|++|+++..|+.+++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 217 FLYKGQIVEWGPTREVF 233 (250)
T ss_pred EEECCeEEEECCHHHHH
Confidence 99999999999988764
No 407
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-33 Score=318.79 Aligned_cols=205 Identities=24% Similarity=0.346 Sum_probs=164.7
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CeeeEEEECCccCCCCC-----CCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSL--KVTGEVSYNGYKLEEFV-----PPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 257 (1449)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|.. ..+|+|.++|.++.... .++.++|++|++.++
T Consensus 26 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 105 (258)
T PRK14268 26 QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPF 105 (258)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccC
Confidence 58999999999999999999999999999999999987510 12899999998864321 245699999998877
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC----ccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD----VCADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~dt 333 (1449)
+ +||+||+.|+.+..+.. .++ .+..++.+++.+|+. +..++
T Consensus 106 ~-~tv~enl~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 150 (258)
T PRK14268 106 P-MSIYDNVAYGPRIHGAN----------KKD------------------------LDGVVENALRSAALWDETSDRLKS 150 (258)
T ss_pred c-ccHHHHHHHHHHHcCCC----------HHH------------------------HHHHHHHHHHHcCCCcchhhhhcC
Confidence 7 89999999875432210 000 001245677888873 33455
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++. |..+++.+++|+
T Consensus 151 ~~~~-----LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~~tiiivs-H~~~~~~~~~d~ 222 (258)
T PRK14268 151 PALS-----LSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK--DYTIVIVT-HNMQQAARISDY 222 (258)
T ss_pred Chhh-----CCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh--CCEEEEEE-CCHHHHHHhCCE
Confidence 5554 999999999999999999999999999999999999999999999853 56666654 556778899999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
|++|++|++++.|+++++.
T Consensus 223 i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 223 TGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999988763
No 408
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.4e-33 Score=353.13 Aligned_cols=211 Identities=23% Similarity=0.377 Sum_probs=179.7
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|++++++ ++.+|+|+||+|++||++||+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 12 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 76 (510)
T PRK15439 12 LCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPP--DSGTLEIGGNPCA 76 (510)
T ss_pred EEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 66777776542 34699999999999999999999999999999999998654 4899999998753
Q ss_pred c---cc-ccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000517 929 Q---ET-FARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 929 ~---~~-~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1004 (1449)
. .. .++.+||++|++.+++.+||+||+.+... . ....++.++++++.++|.+..+..++ .||||
T Consensus 77 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG 144 (510)
T PRK15439 77 RLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSAG-----SLEVA 144 (510)
T ss_pred CCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCChh-----hCCHH
Confidence 2 11 23468999999999999999999987421 1 12334668899999999887777754 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
|||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||++. .+...+|++++|. +|++++.|
T Consensus 145 ~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~-~G~i~~~g 222 (510)
T PRK15439 145 DRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMR-DGTIALSG 222 (510)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEEec
Confidence 999999999999999999999999999999999999999999888999999999986 4678899999998 58999999
Q ss_pred CCCC
Q 000517 1085 PLGK 1088 (1449)
Q Consensus 1085 ~~~~ 1088 (1449)
+..+
T Consensus 223 ~~~~ 226 (510)
T PRK15439 223 KTAD 226 (510)
T ss_pred ChHH
Confidence 8754
No 409
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-33 Score=312.32 Aligned_cols=195 Identities=23% Similarity=0.387 Sum_probs=163.1
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC-CceEEEEcCCCccCCCCCHHHHHH
Q 000517 189 HVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP-PKTSAYISQNDLHIAEMTVRETVD 267 (1449)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 267 (1449)
|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999987 9999999988754322 357999999999999999999998
Q ss_pred HHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCChhh
Q 000517 268 FSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGISGGQ 347 (1449)
Q Consensus 268 f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlSGGq 347 (1449)
++..... ... + ..+..++++++.+||++..++.+.+ |||||
T Consensus 93 ~~~~~~~-~~~--------~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 133 (211)
T cd03298 93 LGLSPGL-KLT--------A-------------------------EDRQAIEVALARVGLAGLEKRLPGE-----LSGGE 133 (211)
T ss_pred ccccccc-Ccc--------H-------------------------HHHHHHHHHHHHcCCHHHHhCCccc-----CCHHH
Confidence 7532110 000 0 0011346688999998877877765 99999
Q ss_pred hhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEEec
Q 000517 348 KKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVYHG 426 (1449)
Q Consensus 348 rkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~~G 426 (1449)
|||++||++++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++ +|...++.+++|++++|++|+++..|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~-sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMV-THQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEE-ecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999999999999876446676665 55667888999999999999998764
No 410
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=3.5e-33 Score=318.95 Aligned_cols=221 Identities=24% Similarity=0.355 Sum_probs=173.7
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|+++.++ ++.+|+|||+++++||++||+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 366777766442 2459999999999999999999999999999999999621123589999999875
Q ss_pred cc---ccccc-eEEEEccCCCCCCCCCHHHHHHHHHHhccC----CCCChHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000517 928 VQ---ETFAR-VSGYCEQTDIHSPNITVEESVIFSAWLRLA----PEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGV 998 (1449)
Q Consensus 928 ~~---~~~~~-~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~----~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 998 (1449)
.. ...++ .++|++|++.+++.+|+.+++.+....... .+.......+.+.++++.+++. +..++.++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 32 12222 478999999999999999998775432110 1111222345678899999997 35555542
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHh-cCeEEEEecC
Q 000517 999 NGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEA-FDELILLKTG 1077 (1449)
Q Consensus 999 ~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~-~d~~~~l~~g 1077 (1449)
.+||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||++||+++. +... +|++++|. +
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~-~~~~~~d~i~~l~-~ 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL-LDYIKPDYVHVMQ-N 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHhhhCCEEEEEe-C
Confidence 2499999999999999999999999999999999999999999999998779999999999763 4444 79999997 5
Q ss_pred cEEEEecCCC
Q 000517 1078 GRIIYCGPLG 1087 (1449)
Q Consensus 1078 G~~v~~G~~~ 1087 (1449)
|++++.|+.+
T Consensus 228 G~i~~~~~~~ 237 (252)
T CHL00131 228 GKIIKTGDAE 237 (252)
T ss_pred CEEEEecChh
Confidence 8999999863
No 411
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=318.32 Aligned_cols=208 Identities=23% Similarity=0.354 Sum_probs=166.2
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCeeeEEEECCccCCC--CC---CCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPS--LKVTGEVSYNGYKLEE--FV---PPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~--~~---~~~~~~yv~Q~d~~~ 257 (1449)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ ...+|+|+++|+++.. .. .++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 5899999999999999999999999999999999999862 1138999999998752 11 235799999999999
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc----cccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV----CADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~dt 333 (1449)
+.+||+||+.++....+..... ++ .+..++++++.+||.. ..++
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~~--------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 145 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKSK--------KE------------------------LDERVEWALKKAALWDEVKDRLND 145 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCCH--------HH------------------------HHHHHHHHHHHcCCccchhhhhcc
Confidence 9999999998875432110000 00 0112455777888742 3444
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.++ .||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++ ++|+|++. |..+++.+++|+
T Consensus 146 ~~~-----~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~s-H~~~~~~~~~d~ 217 (253)
T PRK14267 146 YPS-----NLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--EYTIVLVT-HSPAQAARVSDY 217 (253)
T ss_pred Chh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--CCEEEEEE-CCHHHHHhhCCE
Confidence 444 4999999999999999999999999999999999999999999999864 46666655 556678899999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
|++|++|++++.|+.+++.
T Consensus 218 i~~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 218 VAFLYLGKLIEVGPTRKVF 236 (253)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 412
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=322.98 Aligned_cols=215 Identities=22% Similarity=0.260 Sum_probs=171.9
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCC--C-CeeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKT--S-GYVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~I~i~G 924 (1449)
.+.++|+++.++ +..+|+|+|++|++||++||+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 467788876542 2358999999999999999999999999999999999754 1 12589999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc----ccccccccC
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD----AIKDSLVGI 995 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 995 (1449)
.+... ..+++.++|++|++.+++ .|++||+.+....+. ....+..++.+.++++.+++. +..+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--- 164 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLHDN--- 164 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHhcC---
Confidence 87531 234667999999988877 599999988653321 111222345567777777542 233333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ .+.+.+|++++|+
T Consensus 165 --~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~ 240 (271)
T PRK14238 165 --AYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFL 240 (271)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEE
Confidence 347999999999999999999999999999999999999999999999865 799999999986 4677899999997
Q ss_pred cCcEEEEecCC
Q 000517 1076 TGGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~gG~~v~~G~~ 1086 (1449)
+|++++.|+.
T Consensus 241 -~G~i~~~g~~ 250 (271)
T PRK14238 241 -NGYVNEYDDT 250 (271)
T ss_pred -CCEEEEeCCH
Confidence 5899999875
No 413
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-33 Score=317.75 Aligned_cols=203 Identities=24% Similarity=0.335 Sum_probs=167.7
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCC------C---CCCceEEEEcCCCc
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEE------F---VPPKTSAYISQNDL 255 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~------~---~~~~~~~yv~Q~d~ 255 (1449)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 5899999999999999999999999999999999999987 9999999987631 0 11356899999999
Q ss_pred cCCCCCHHHHHHHH-HHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccc
Q 000517 256 HIAEMTVRETVDFS-ARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTM 334 (1449)
Q Consensus 256 ~~~~lTV~E~l~f~-~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 334 (1449)
+++.+||+||+.+. ....+.. ..+ ....++.+++.+||+...++.
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLS----------KDQ------------------------ALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCC----------HHH------------------------HHHHHHHHHHHcCChhhhhCC
Confidence 99999999999753 2221110 000 011246678899998877777
Q ss_pred ccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeE
Q 000517 335 VGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDI 414 (1449)
Q Consensus 335 vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v 414 (1449)
+++ ||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.+ .++|++++. |...++.+++|++
T Consensus 139 ~~~-----LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~s-h~~~~~~~~~d~i 211 (242)
T PRK11124 139 PLH-----LSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-TGITQVIVT-HEVEVARKTASRV 211 (242)
T ss_pred hhh-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-cCCEEEEEe-CCHHHHHHhcCEE
Confidence 765 999999999999999999999999999999999999999999999864 467766655 5556788899999
Q ss_pred EEEeCCeEEEecChhhH
Q 000517 415 ILMAEGKIVYHGPQDHV 431 (1449)
Q Consensus 415 ~lL~~G~iv~~G~~~~~ 431 (1449)
++|.+|++++.|+.+++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999987764
No 414
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=6.7e-32 Score=348.16 Aligned_cols=123 Identities=28% Similarity=0.390 Sum_probs=101.2
Q ss_pred CCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhh---CCCEEE
Q 000517 948 NITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI-KDSLVGIPGVNGLSTEQRKRLTIAVELVA---NPSIIF 1023 (1449)
Q Consensus 948 ~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~---~p~ill 1023 (1449)
++||.|.+.|...+. .+ ....++++.+||... .+..+ +.||||||||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~i------~~~l~~L~~~gL~~l~l~~~~-----~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---SI------SRKLQTLCDVGLGYIKLGQPA-----TTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---ch------hHHHHHHHHcCCCchhhcCcc-----ccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 478888888765432 11 124578889999753 45443 4799999999999999997 599999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe-----cCcEEEEecCC
Q 000517 1024 MDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK-----TGGRIIYCGPL 1086 (1449)
Q Consensus 1024 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~-----~gG~~v~~G~~ 1086 (1449)
|||||+|||+.+...+++.|+++.+.|.|||+++|++. ....+|+++.|. ++|++++.|++
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999975 346799999993 47999999986
No 415
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=321.59 Aligned_cols=208 Identities=24% Similarity=0.379 Sum_probs=171.0
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1449)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++..++.+|
T Consensus 21 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 97 (265)
T PRK10253 21 TVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDIT 97 (265)
T ss_pred EEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCCc
Confidence 5899999999999999999999999999999999999987 9999999988754322 346899999998888999
Q ss_pred HHHHHHHHHHcc-CCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 262 VRETVDFSARCQ-GVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 262 V~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
|+||+.++..-. ...... + + ..+..++.+++.+||++..++.+.+
T Consensus 98 v~~~~~~~~~~~~~~~~~~----------------~--~-------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 143 (265)
T PRK10253 98 VQELVARGRYPHQPLFTRW----------------R--K-------------EDEEAVTKAMQATGITHLADQSVDT--- 143 (265)
T ss_pred HHHHHHhCcccccccccCC----------------C--H-------------HHHHHHHHHHHHcCCHHHhcCCccc---
Confidence 999998742100 000000 0 0 0011346688999998777777765
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++. |...++.+++|++++|++|
T Consensus 144 --LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~t-H~~~~~~~~~d~i~~l~~G 220 (265)
T PRK10253 144 --LSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVL-HDLNQACRYASHLIALREG 220 (265)
T ss_pred --CChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998764466766655 5566889999999999999
Q ss_pred eEEEecChhhHH
Q 000517 421 KIVYHGPQDHVL 432 (1449)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1449)
++++.|+.+++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999988764
No 416
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=7.2e-33 Score=316.37 Aligned_cols=206 Identities=22% Similarity=0.271 Sum_probs=166.0
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CeeeEEEECCccCCCCCC-CceEEEEcCCCc--cCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSL-KVTGEVSYNGYKLEEFVP-PKTSAYISQNDL--HIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~-~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~l 260 (1449)
++|+|+|+++++||+++|+||||||||||+++|+|.++|.. ..+|+|.++|+++..... ++.++||+|++. +.+.+
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 48999999999999999999999999999999999998810 028999999988753322 356999999974 44668
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc---cccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV---CADTMVGN 337 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~---~~dt~vg~ 337 (1449)
|+.+++.+.+...+... .+..++.+++.+||.+ ..++.+++
T Consensus 97 ~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~l~~~~l~~~~~~~~~~~~~ 140 (254)
T PRK10418 97 TMHTHARETCLALGKPA------------------------------------DDATLTAALEAVGLENAARVLKLYPFE 140 (254)
T ss_pred cHHHHHHHHHHHcCCCh------------------------------------HHHHHHHHHHHcCCCChhhhhhcCCcc
Confidence 99999876543221100 0012456788899976 34565554
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|++++. |..+++.+.+|++++|
T Consensus 141 -----LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~s-H~~~~~~~~~d~v~~l 214 (254)
T PRK10418 141 -----MSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVT-HDMGVVARLADDVAVM 214 (254)
T ss_pred -----cCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEe-cCHHHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998765466766655 5566788899999999
Q ss_pred eCCeEEEecChhhHH
Q 000517 418 AEGKIVYHGPQDHVL 432 (1449)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1449)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 215 SHGRIVEQGDVETLF 229 (254)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999988764
No 417
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=7.2e-34 Score=321.58 Aligned_cols=196 Identities=24% Similarity=0.420 Sum_probs=155.0
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCCCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSPNIT 950 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~lT 950 (1449)
+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++.+++ .|
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 91 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVP--ENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-RS 91 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-ch
Confidence 4599999999999999999999999999999999998654 48999999986432 234667999999987764 79
Q ss_pred HHHHHHHHHHhccCCCCChHHHH-----HHHHHHHHHc--CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000517 951 VEESVIFSAWLRLAPEINSKTKA-----EFVNEVLETI--ELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIF 1023 (1449)
Q Consensus 951 v~e~l~f~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~ill 1023 (1449)
|.||+.+... ........ ...++.++.+ ++....+.. +..|||||||||+|||+|+.+|++|+
T Consensus 92 v~~nl~~~~~-----~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~lll 161 (237)
T cd03252 92 IRDNIALADP-----GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQ-----GAGLSGGQRQRIAIARALIHNPRILI 161 (237)
T ss_pred HHHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcC-----CCcCCHHHHHHHHHHHHHhhCCCEEE
Confidence 9999976321 11111111 0112333333 333333333 34799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1024 MDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1024 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|||||+|||+.+...+.+.|++++ +|+|||+++|+++ ++ ..+|++++|. +|++++.|+.
T Consensus 162 lDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~-~~~d~v~~l~-~G~i~~~~~~ 220 (237)
T cd03252 162 FDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLS-TV-KNADRIIVME-KGRIVEQGSH 220 (237)
T ss_pred EeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-HhCCEEEEEE-CCEEEEEcCH
Confidence 999999999999999999999986 4899999999986 34 5699999998 5899999875
No 418
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=5.4e-34 Score=362.50 Aligned_cols=210 Identities=32% Similarity=0.506 Sum_probs=176.0
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++|+|++|.++. ++.+|+|+|++++|||++||+||||||||||++.|.|..++ .+|+|.+||.++
T Consensus 328 ~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~dI 393 (567)
T COG1132 328 SIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGIDI 393 (567)
T ss_pred eEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCEeh
Confidence 5899999987752 35699999999999999999999999999999999997665 589999999886
Q ss_pred c---cccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcC-------CcccccccccCCC
Q 000517 928 V---QETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIE-------LDAIKDSLVGIPG 997 (1449)
Q Consensus 928 ~---~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-------L~~~~~~~vg~~~ 997 (1449)
. ...+|+.++||+|++.+|. -||+||+.++. ++.++ +.++++++..+ +.+..|+.+|..|
T Consensus 394 ~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~----eei~~a~k~a~~~d~I~~lp~g~dt~vge~G 463 (567)
T COG1132 394 RDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATD----EEIEEALKLANAHEFIANLPDGYDTIVGERG 463 (567)
T ss_pred hhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCH----HHHHHHHHHhChHHHHHhCcccccceecCCC
Confidence 4 3567889999999998886 89999998852 22222 23344444332 3345789999655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
. .||||||||++||||++++|+||+||||||+||+.+...|++.++++. +|+|+++++|+++ ....+|++++|+ +
T Consensus 464 ~-~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~-~ 538 (567)
T COG1132 464 V-NLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLD-N 538 (567)
T ss_pred c-cCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEE-C
Confidence 4 699999999999999999999999999999999999999999999876 5789999999986 345699999998 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|++++.|+.
T Consensus 539 G~i~e~G~h 547 (567)
T COG1132 539 GRIVERGTH 547 (567)
T ss_pred CEEEEecCH
Confidence 899999986
No 419
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.4e-33 Score=316.29 Aligned_cols=209 Identities=23% Similarity=0.352 Sum_probs=169.0
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.+.++|+++.+ +++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLA-------------GDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISP--TSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEee-------------CCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCCeEEECCEEc
Confidence 36677777654 234699999999999999999999999999999999997654 589999999764
Q ss_pred cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCH
Q 000517 928 VQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLST 1003 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSg 1003 (1449)
.. ..+++.++|++|++.+++ .|++||+.+....+.. ....+.++++++.++|. ...++.+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ-----QPDPAIFLDDLERFALPDTILTKNI-----AELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC-----ChHHHHHHHHHHHcCCChHHhcCCc-----ccCCH
Confidence 32 234567999999988876 5999999875443211 11234577899999995 4556554 37999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEE
Q 000517 1004 EQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIY 1082 (1449)
Q Consensus 1004 GqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~ 1082 (1449)
|||||++||++|+.+|++++|||||+|||+.+...+.+.|++++++ |.|||+++|+++. + +.+|++++|.+.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCEEEEEecccchHh
Confidence 9999999999999999999999999999999999999999998764 8999999999863 4 57999999964444444
Q ss_pred ec
Q 000517 1083 CG 1084 (1449)
Q Consensus 1083 ~G 1084 (1449)
.|
T Consensus 219 ~~ 220 (225)
T PRK10247 219 EA 220 (225)
T ss_pred hh
Confidence 44
No 420
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=360.47 Aligned_cols=212 Identities=23% Similarity=0.347 Sum_probs=177.8
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++++|++|.++. +++.+|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 341 ~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~i 407 (582)
T PRK11176 341 DIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHDL 407 (582)
T ss_pred eEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEEh
Confidence 5889999987642 124599999999999999999999999999999999998765 589999999885
Q ss_pred cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000517 928 VQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-------IKDSLVGIPG 997 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 997 (1449)
.+ ..+++.++||+|++.+++ -|++||+.++. +.+. .++.++++++..++.+ -.|+.+|..|
T Consensus 408 ~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~----~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g 478 (582)
T PRK11176 408 RDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQY----SREQIEEAARMAYAMDFINKMDNGLDTVIGENG 478 (582)
T ss_pred hhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCC----CHHHHHHHHHHhCcHHHHHhcccccCceeCCCC
Confidence 43 457788999999998876 69999997641 1112 2345667777776543 3578888665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
+.||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|++||+++ ..+.+|++++|+ +
T Consensus 479 -~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~-~ 553 (582)
T PRK11176 479 -VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVE-D 553 (582)
T ss_pred -CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEE-C
Confidence 4699999999999999999999999999999999999999999999874 4799999999974 578899999998 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|++++.|+.
T Consensus 554 g~i~e~g~~ 562 (582)
T PRK11176 554 GEIVERGTH 562 (582)
T ss_pred CEEEEeCCH
Confidence 899999985
No 421
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.2e-33 Score=358.84 Aligned_cols=206 Identities=22% Similarity=0.322 Sum_probs=170.8
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1449)
++|+|+|++++|||.++|+|+||||||||+++|+|+++|+ +|+|.+||+++++... ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 5999999999999999999999999999999999999998 9999999999876653 5789999999988775 9
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
++|||.++.. . +.++..+++...+. ++.++. |++..||.+|+. ..
T Consensus 431 i~~NI~~~~~---~-----------------------~d~~i~~a~~~~gl------~~~i~~--lp~Gldt~i~e~-g~ 475 (592)
T PRK10790 431 FLANVTLGRD---I-----------------------SEEQVWQALETVQL------AELARS--LPDGLYTPLGEQ-GN 475 (592)
T ss_pred HHHHHHhCCC---C-----------------------CHHHHHHHHHHcCc------HHHHHh--ccccccccccCC-CC
Confidence 9999988520 0 11112222222222 222332 677889999874 34
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
.||||||||++|||||+.+|++++||||||+||+.++..|.+.|+++.. ++|+|+..|++ +....||+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~~tvIivtHr~--~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--HTTLVVIAHRL--STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEecch--HHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999998753 58888877775 5677899999999999
Q ss_pred EEEecChhhHHH
Q 000517 422 IVYHGPQDHVLA 433 (1449)
Q Consensus 422 iv~~G~~~~~~~ 433 (1449)
++..|+++++.+
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999999864
No 422
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.5e-33 Score=316.35 Aligned_cols=212 Identities=26% Similarity=0.320 Sum_probs=167.8
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCC--CCCCCeeeEEEECCccCCCCCC----CceEEEEcCCCccCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNL--DPSLKVTGEVSYNGYKLEEFVP----PKTSAYISQNDLHIA 258 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l--~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 258 (1449)
.+|+|+|+.+++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|+++..... +..++|++|++.+++
T Consensus 14 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (243)
T TIGR01978 14 EILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEIP 90 (243)
T ss_pred EEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeeccccccC
Confidence 5899999999999999999999999999999999995 566 9999999988754322 234899999999999
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC-ccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD-VCADTMVGN 337 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~vg~ 337 (1449)
.+|++|++.+............ ..+.+. ....++.+++.+||+ ...++.++.
T Consensus 91 ~~t~~~~~~~~~~~~~~~~~~~----------------~~~~~~-----------~~~~~~~~l~~~~l~~~~~~~~~~~ 143 (243)
T TIGR01978 91 GVSNLEFLRSALNARRSARGEE----------------PLDLLD-----------FLKLLKAKLALLGMDEEFLNRSVNE 143 (243)
T ss_pred CcCHHHHHHHHHHHhhcccccc----------------cccHHH-----------HHHHHHHHHHHcCCchhhccccccc
Confidence 9999999988654221000000 000000 012356788999997 456666541
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhh-cCeEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDL-FDDIIL 416 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~-fD~v~l 416 (1449)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++.| ..+++... +|++++
T Consensus 144 ----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~vsH-~~~~~~~~~~d~i~~ 217 (243)
T TIGR01978 144 ----GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PDRSFLIITH-YQRLLNYIKPDYVHV 217 (243)
T ss_pred ----CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CCcEEEEEEe-cHHHHHhhcCCeEEE
Confidence 3999999999999999999999999999999999999999999999865 4667776655 45677777 899999
Q ss_pred EeCCeEEEecChhhHH
Q 000517 417 MAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 417 L~~G~iv~~G~~~~~~ 432 (1449)
|++|++++.|+++++.
T Consensus 218 l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 218 LLDGRIVKSGDVELAK 233 (243)
T ss_pred EeCCEEEEecCHHHhc
Confidence 9999999999987654
No 423
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-33 Score=317.20 Aligned_cols=203 Identities=25% Similarity=0.358 Sum_probs=162.1
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCCCeeeEEEECCccCCCC-----CCCceEEEEcCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLD-----PSLKVTGEVSYNGYKLEEF-----VPPKTSAYISQND 254 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 254 (1449)
.+|+|+|+.+++|++++|+|||||||||||++|+|..+ |+ +|+|.++|+++... ..++.++|++|++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 96 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARV---EGEILLDGENIYDPHVDVVELRRRVGMVFQKP 96 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCC---ceEEEECCEEccccccCHHHHhhcEEEEecCC
Confidence 48999999999999999999999999999999999864 34 89999999887531 1145799999998
Q ss_pred ccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc----c
Q 000517 255 LHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV----C 330 (1449)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~----~ 330 (1449)
.+++ .||+||+.++....+.... .+ .+..++.+++.+||.+ .
T Consensus 97 ~~~~-~tv~enl~~~~~~~~~~~~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~ 142 (253)
T PRK14242 97 NPFP-KSIFENVAYGLRVNGVKDK---------AY------------------------LAERVERSLRHAALWDEVKDR 142 (253)
T ss_pred CCCc-CcHHHHHHHHHHHcCCCCH---------HH------------------------HHHHHHHHHHHcCCchhhhHH
Confidence 8777 5999999987543221100 00 0112345677778743 2
Q ss_pred ccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhh
Q 000517 331 ADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDL 410 (1449)
Q Consensus 331 ~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~ 410 (1449)
.++.++ .|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|+|++. |...++.++
T Consensus 143 ~~~~~~-----~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tvii~t-H~~~~~~~~ 214 (253)
T PRK14242 143 LHESAL-----GLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA--RYTIIIVT-HNMQQAARV 214 (253)
T ss_pred hhCCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCeEEEEE-ecHHHHHHh
Confidence 344444 4999999999999999999999999999999999999999999999843 56666654 556678899
Q ss_pred cCeEEEEeCCeEEEecChhhHH
Q 000517 411 FDDIILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 411 fD~v~lL~~G~iv~~G~~~~~~ 432 (1449)
+|+|++|++|+++..|+.+++.
T Consensus 215 ~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 215 SDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred CCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999987763
No 424
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.8e-33 Score=321.33 Aligned_cols=215 Identities=22% Similarity=0.319 Sum_probs=170.9
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC--------CCceEEEEcCCCcc
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV--------PPKTSAYISQNDLH 256 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~--------~~~~~~yv~Q~d~~ 256 (1449)
++|+|+|+.+++||+++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++.+
T Consensus 18 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (262)
T PRK09984 18 QALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNL 97 (262)
T ss_pred EEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEcccccc
Confidence 5899999999999999999999999999999999999875223699999998764321 13468999999988
Q ss_pred CCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccc
Q 000517 257 IAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVG 336 (1449)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 336 (1449)
++.+||+||+.+....... .. .+. .+.. .. +.+..++.+++.+||++..|+.++
T Consensus 98 ~~~~tv~e~l~~~~~~~~~--~~-------~~~--~~~~-~~--------------~~~~~~~~~l~~~~l~~~~~~~~~ 151 (262)
T PRK09984 98 VNRLSVLENVLIGALGSTP--FW-------RTC--FSWF-TR--------------EQKQRALQALTRVGMVHFAHQRVS 151 (262)
T ss_pred ccCCcHHHHHHhhhccccc--ch-------hhh--cccc-cH--------------HHHHHHHHHHHHcCCHHHHhCCcc
Confidence 9999999999875421000 00 000 0000 00 011235678999999887788776
Q ss_pred ccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEE
Q 000517 337 NAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIIL 416 (1449)
Q Consensus 337 ~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~l 416 (1449)
+ |||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++++..+.|+|++. |..+++.+++|+|++
T Consensus 152 ~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~t-H~~~~~~~~~d~i~~ 225 (262)
T PRK09984 152 T-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTL-HQVDYALRYCERIVA 225 (262)
T ss_pred c-----cCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHHhCCEEEE
Confidence 5 9999999999999999999999999999999999999999999998765466766665 556678899999999
Q ss_pred EeCCeEEEecChhhH
Q 000517 417 MAEGKIVYHGPQDHV 431 (1449)
Q Consensus 417 L~~G~iv~~G~~~~~ 431 (1449)
|++|++++.|+++++
T Consensus 226 l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 226 LRQGHVFYDGSSQQF 240 (262)
T ss_pred EECCEEEEeCCHHHh
Confidence 999999999988764
No 425
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-33 Score=316.38 Aligned_cols=194 Identities=20% Similarity=0.304 Sum_probs=165.4
Q ss_pred ccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCH
Q 000517 872 RKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITV 951 (1449)
Q Consensus 872 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv 951 (1449)
.++.+|+++|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|. ++++.|+..+.+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p--~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSP--TVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCE----------EeEEecccCCCCCCcH
Confidence 446799999999999999999999999999999999998665 4899999984 3567777767788999
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000517 952 EESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGL 1031 (1449)
Q Consensus 952 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgL 1031 (1449)
.||+.+..... ....+...+.++++++.++|.+..+..++ .||||||||++||++|+.+|++|+|||||+||
T Consensus 103 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQPVK-----KYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCCcc-----cCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 99998764432 12234445567788999999887776643 79999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1032 DARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1032 D~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
|+.+...+.+.|+++++.|+|||+++|++. ++.+.+|++++|. +|+++..|+.+
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~-~G~i~~~g~~~ 228 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIE-GGKLKDYGELD 228 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEE-CCEEEEeCCHH
Confidence 999999999999999777999999999975 5677899999997 58999998864
No 426
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-33 Score=320.98 Aligned_cols=204 Identities=29% Similarity=0.401 Sum_probs=169.0
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC-----CCceEEEEcCCCc-cCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV-----PPKTSAYISQNDL-HIA 258 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~~ 258 (1449)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|+++.... .++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 5899999999999999999999999999999999999987 999999998874211 1357999999863 344
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
.+||+||+.++....+.. +.+ ....+..+++.+||.+..++.+++
T Consensus 93 ~~tv~e~i~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~L~~~~~~~~~~- 137 (275)
T PRK13639 93 APTVEEDVAFGPLNLGLS----------KEE------------------------VEKRVKEALKAVGMEGFENKPPHH- 137 (275)
T ss_pred cccHHHHHHHHHHHcCCC----------HHH------------------------HHHHHHHHHHHCCCchhhcCChhh-
Confidence 579999998764321110 000 011245688999999888888776
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.+ .+.|++++ +|..+++.++||++++|+
T Consensus 138 ----LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~~til~v-tH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 138 ----LSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-EGITIIIS-THDVDLVPVYADKVYVMS 211 (275)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEE-ecCHHHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999875 36676665 455678888999999999
Q ss_pred CCeEEEecChhhHH
Q 000517 419 EGKIVYHGPQDHVL 432 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~ 432 (1449)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999998874
No 427
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-33 Score=318.05 Aligned_cols=204 Identities=24% Similarity=0.326 Sum_probs=165.8
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC----eeEEEEEEcCccCc---cccccceEEEEccCCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG----YVEGEIKISGYPKV---QETFARVSGYCEQTDIH 945 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~----~~~G~I~i~G~~~~---~~~~~~~~gyv~Q~d~~ 945 (1449)
++.+|+|+||++++||+++|+|+||||||||+++|+|...+. .+.|++.++|.+.. ...+++.++|++|++.+
T Consensus 22 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~~~~~~i~~~~q~~~~ 101 (257)
T PRK14246 22 DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAIKLRKEVGMVFQQPNP 101 (257)
T ss_pred CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHHHHhcceEEEccCCcc
Confidence 456999999999999999999999999999999999976542 12355556565532 12356779999999999
Q ss_pred CCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000517 946 SPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSI 1021 (1449)
Q Consensus 946 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~i 1021 (1449)
++.+|++||+.+...... ....++..+.++++++.+++.+ ..+.. +..||+|||||++|||+|+.+|++
T Consensus 102 ~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~LS~G~~qrl~laral~~~P~l 174 (257)
T PRK14246 102 FPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP-----ASQLSGGQQQRLTIARALALKPKV 174 (257)
T ss_pred CCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC-----cccCCHHHHHHHHHHHHHHcCCCE
Confidence 899999999988643321 1122344466889999999964 33333 347999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1022 IFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1022 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
++|||||+|||..+...+.+.|+++++ ++|||++||++. .+...+|++++|. +|+++..|+.
T Consensus 175 lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~-~g~i~~~g~~ 236 (257)
T PRK14246 175 LLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLY-NGELVEWGSS 236 (257)
T ss_pred EEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEECCH
Confidence 999999999999999999999999864 799999999986 4668899999997 5899999875
No 428
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=351.15 Aligned_cols=216 Identities=28% Similarity=0.367 Sum_probs=178.8
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
++++|+++++ +++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~-------------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i~ 69 (501)
T PRK11288 5 LSFDGIGKTF-------------PGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQP--DAGSILIDGQEMR 69 (501)
T ss_pred EEEeeeEEEE-------------CCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 5667776654 234699999999999999999999999999999999998654 5899999998753
Q ss_pred c----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHH
Q 000517 929 Q----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTE 1004 (1449)
Q Consensus 929 ~----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1004 (1449)
. ..+++.+||++|++.+++.+||.||+.+....+........+.++.++++++.++|.+..+..++ .||||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LSgG 144 (501)
T PRK11288 70 FASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTPLK-----YLSIG 144 (501)
T ss_pred CCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCchh-----hCCHH
Confidence 2 22456799999999889999999999885321111111233445678899999999877676654 79999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1005 QRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1005 qrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||++||++. ++...+|++++|. +|+++..+
T Consensus 145 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~-~G~i~~~~ 222 (501)
T PRK11288 145 QRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFK-DGRYVATF 222 (501)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEE-CCEEEeec
Confidence 999999999999999999999999999999999999999999878999999999986 5678899999998 58998776
Q ss_pred CC
Q 000517 1085 PL 1086 (1449)
Q Consensus 1085 ~~ 1086 (1449)
+.
T Consensus 223 ~~ 224 (501)
T PRK11288 223 DD 224 (501)
T ss_pred Cc
Confidence 53
No 429
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=4e-33 Score=320.53 Aligned_cols=207 Identities=24% Similarity=0.284 Sum_probs=169.4
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCc--cCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDL--HIA 258 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 258 (1449)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999997 9999999988753211 346999999864 567
Q ss_pred CCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC-ccccccccc
Q 000517 259 EMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD-VCADTMVGN 337 (1449)
Q Consensus 259 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~vg~ 337 (1449)
.+||.|++.+..+...... ..+ ....++.+++.+||. +..++.+.+
T Consensus 103 ~~tv~~~l~~~~~~~~~~~---------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~~ 149 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLE---------PEQ------------------------REKQIIETLRQVGLLPDHASYYPHM 149 (267)
T ss_pred chhHHHHHHHHHHhccCCC---------HHH------------------------HHHHHHHHHHHcCCChHHHhcCchh
Confidence 8899999988654321000 000 011246688999994 566666654
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++. |..+++..+||++++|
T Consensus 150 -----LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivs-H~~~~~~~~~d~i~~l 223 (267)
T PRK15112 150 -----LAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVT-QHLGMMKHISDQVLVM 223 (267)
T ss_pred -----cCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEe-CCHHHHHHhcCEEEEE
Confidence 9999999999999999999999999999999999999999999998764466766654 5567888899999999
Q ss_pred eCCeEEEecChhhHH
Q 000517 418 AEGKIVYHGPQDHVL 432 (1449)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1449)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999987764
No 430
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-33 Score=326.76 Aligned_cols=214 Identities=19% Similarity=0.233 Sum_probs=169.1
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CeeeEEEECCccCCCCCC-------CceEEEEcCCCc
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSL-KVTGEVSYNGYKLEEFVP-------PKTSAYISQNDL 255 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 255 (1449)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|+++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 458999999999999999999999999999999999987421 138999999998765332 246999999875
Q ss_pred --cCCCCCHHHHHHHHHHccCC-CCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcc--
Q 000517 256 --HIAEMTVRETVDFSARCQGV-GSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVC-- 330 (1449)
Q Consensus 256 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~-- 330 (1449)
+.+.+||.+++.+....... +... .+. + +....+.++|+.+||.+.
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~------~~~------------~-----------~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW------QRF------------G-----------WRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc------ccH------------H-----------HHHHHHHHHHHHCCCCChHH
Confidence 67889999999764321100 0000 000 0 001235678999999743
Q ss_pred -ccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHh
Q 000517 331 -ADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFD 409 (1449)
Q Consensus 331 -~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~ 409 (1449)
.++.+. .|||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+..+.|+|+ ++|+...+.+
T Consensus 151 ~~~~~p~-----~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~-itHdl~~v~~ 224 (330)
T PRK15093 151 AMRSFPY-----ELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILL-ISHDLQMLSQ 224 (330)
T ss_pred HHhCCch-----hCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEE-EECCHHHHHH
Confidence 355554 499999999999999999999999999999999999999999999997654666555 5677888989
Q ss_pred hcCeEEEEeCCeEEEecChhhHH
Q 000517 410 LFDDIILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 410 ~fD~v~lL~~G~iv~~G~~~~~~ 432 (1449)
++|+|++|.+|+|++.|+.+++.
T Consensus 225 ~~dri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 225 WADKINVLYCGQTVETAPSKELV 247 (330)
T ss_pred hCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999988874
No 431
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-33 Score=330.00 Aligned_cols=217 Identities=26% Similarity=0.447 Sum_probs=172.1
Q ss_pred cccCccccccccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEE
Q 000517 173 KLSGYKSLEAKINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAY 249 (1449)
Q Consensus 173 ~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~y 249 (1449)
..+.|+.+ +.++|+|+|+++++||.+||+|++|||||||++.|+|-++|+ +|+|+.||.++..... ++.+++
T Consensus 342 vsF~y~~~--~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~v 416 (573)
T COG4987 342 VSFTYPGQ--QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISV 416 (573)
T ss_pred ceeecCCC--ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhh
Confidence 34445433 346999999999999999999999999999999999999998 9999999999877655 467899
Q ss_pred EcCCCccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc
Q 000517 250 ISQNDLHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV 329 (1449)
Q Consensus 250 v~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~ 329 (1449)
++|. .|+..-|+|+||.++. |+...++..++...-|+ ++.++ +.++
T Consensus 417 l~Qr-~hlF~~Tlr~NL~lA~-------------------------~~AsDEel~~aL~qvgL------~~l~~--~~p~ 462 (573)
T COG4987 417 LTQR-VHLFSGTLRDNLRLAN-------------------------PDASDEELWAALQQVGL------EKLLE--SAPD 462 (573)
T ss_pred hccc-hHHHHHHHHHHHhhcC-------------------------CCCCHHHHHHHHHHcCH------HHHHH--hChh
Confidence 9995 4566679999998753 12121222222211111 11121 2455
Q ss_pred cccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHh
Q 000517 330 CADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFD 409 (1449)
Q Consensus 330 ~~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~ 409 (1449)
..||.+|+. .++||||||||++|||+|++++++++|||||.|||+.|..++++.|.+-+ .++|+++..|+-. -.+
T Consensus 463 gl~t~lge~-G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~--~~kTll~vTHrL~--~le 537 (573)
T COG4987 463 GLNTWLGEG-GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA--EGKTLLMVTHRLR--GLE 537 (573)
T ss_pred hhhchhccC-CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh--cCCeEEEEecccc--cHh
Confidence 778999975 56799999999999999999999999999999999999999999998755 4889988776644 347
Q ss_pred hcCeEEEEeCCeEEEecChhhHHH
Q 000517 410 LFDDIILMAEGKIVYHGPQDHVLA 433 (1449)
Q Consensus 410 ~fD~v~lL~~G~iv~~G~~~~~~~ 433 (1449)
.||+|++|++|+++.+|.+.+++.
T Consensus 538 ~~drIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 538 RMDRIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred hcCEEEEEECCeeeecCCHHhhhc
Confidence 899999999999999999999874
No 432
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.3e-33 Score=311.71 Aligned_cols=194 Identities=29% Similarity=0.443 Sum_probs=160.1
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC---CCceEEEEcCCCc-cCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV---PPKTSAYISQNDL-HIAE 259 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 259 (1449)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 45999999999999999999999999999999999999987 999999998875432 1357899999864 4678
Q ss_pred CCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccc
Q 000517 260 MTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAM 339 (1449)
Q Consensus 260 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 339 (1449)
+||+||+.++....+.. ..+ .+..++.+++.+||++..++.+++
T Consensus 91 ~t~~~~l~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~-- 134 (211)
T cd03225 91 PTVEEEVAFGLENLGLP----------EEE------------------------IEERVEEALELVGLEGLRDRSPFT-- 134 (211)
T ss_pred CcHHHHHHHHHHHcCCC----------HHH------------------------HHHHHHHHHHHcCcHhhhcCCccc--
Confidence 99999998865322110 000 011245678899998777777765
Q ss_pred cccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeC
Q 000517 340 RRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAE 419 (1449)
Q Consensus 340 ~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~ 419 (1449)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++. |..+++..+||+|++|++
T Consensus 135 ---LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~tvi~~s-H~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 135 ---LSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE-GKTIIIVT-HDLDLLLELADRVIVLED 209 (211)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc-CCEEEEEe-CCHHHHHHhCCEEEEEeC
Confidence 9999999999999999999999999999999999999999999998764 66766654 556788889999999999
Q ss_pred Ce
Q 000517 420 GK 421 (1449)
Q Consensus 420 G~ 421 (1449)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 433
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=4.2e-33 Score=318.39 Aligned_cols=202 Identities=25% Similarity=0.345 Sum_probs=164.5
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc-----Ccc---c----cccceEEEEcc
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYP-----KVQ---E----TFARVSGYCEQ 941 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~-----~~~---~----~~~~~~gyv~Q 941 (1449)
..+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+ ... . ..++.++|++|
T Consensus 16 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~q 93 (253)
T TIGR02323 16 GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAP--DHGTATYIMRSGAELELYQLSEAERRRLMRTEWGFVHQ 93 (253)
T ss_pred ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEEecccccccccccCCHHHHHHhhhcceEEEEe
Confidence 4589999999999999999999999999999999998665 58999999975 321 1 12356899999
Q ss_pred CCC--CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-cccccccCCCCCCCCHHHHHHHHHHHHHhhC
Q 000517 942 TDI--HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-IKDSLVGIPGVNGLSTEQRKRLTIAVELVAN 1018 (1449)
Q Consensus 942 ~d~--~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~ 1018 (1449)
++. ..+.+|+.||+.+..... .. .......+.++++++.+++.+ ..++.+ +.||||||||++|||||+.+
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~LSgG~~qrv~laral~~~ 166 (253)
T TIGR02323 94 NPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDLP-----RAFSGGMQQRLQIARNLVTR 166 (253)
T ss_pred CcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcCc-----hhcCHHHHHHHHHHHHHhcC
Confidence 974 446679999987543211 11 111233467889999999963 556554 47999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1019 PSIIFMDEPTTGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1019 p~illLDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. .+.+.+|++++|. +|++++.|+.
T Consensus 167 p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~~l~-~G~i~~~~~~ 233 (253)
T TIGR02323 167 PRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLLVMQ-QGRVVESGLT 233 (253)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEE-CCEEEEECCH
Confidence 9999999999999999999999999998754 899999999976 5667899999997 5899999875
No 434
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2e-33 Score=359.39 Aligned_cols=209 Identities=25% Similarity=0.385 Sum_probs=177.9
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++++|++|.++. +..+|+|+|++++|||.+||+|+||||||||+++|+|..+| .+|+|.+||.+.
T Consensus 340 ~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~i 405 (592)
T PRK10790 340 RIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRPL 405 (592)
T ss_pred eEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEh
Confidence 5889999987641 13599999999999999999999999999999999998766 489999999876
Q ss_pred c---cccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000517 928 V---QETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-------IKDSLVGIPG 997 (1449)
Q Consensus 928 ~---~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 997 (1449)
. ...+++.++||+|++.+++. |++|||.++. +. .++.++++++.+|+.+ -.|+.+|..|
T Consensus 406 ~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~----~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g 474 (592)
T PRK10790 406 SSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DI----SEEQVWQALETVQLAELARSLPDGLYTPLGEQG 474 (592)
T ss_pred hhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CC----CHHHHHHHHHHcCcHHHHHhccccccccccCCC
Confidence 4 34678899999999999875 9999998742 11 1345777888888664 3467777654
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
..||||||||++|||||+++|+||+||||||+||+.+++.|.+.|+++.+ ++|+|+++|+++ ....+|++++|+ +
T Consensus 475 -~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~-~ 549 (592)
T PRK10790 475 -NNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLH-R 549 (592)
T ss_pred -CCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEE-C
Confidence 46999999999999999999999999999999999999999999999754 799999999984 567899999997 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|+++..|+.
T Consensus 550 G~i~~~G~~ 558 (592)
T PRK10790 550 GQAVEQGTH 558 (592)
T ss_pred CEEEEEcCH
Confidence 999999985
No 435
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=3.2e-33 Score=311.12 Aligned_cols=194 Identities=23% Similarity=0.400 Sum_probs=161.5
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCC-----CCCceEEEEcCCCccCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEF-----VPPKTSAYISQNDLHIAE 259 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~~ 259 (1449)
.+|+++|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.
T Consensus 14 ~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (213)
T cd03262 14 HVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPH 90 (213)
T ss_pred EeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCCC
Confidence 5899999999999999999999999999999999999987 99999999877421 114579999999988999
Q ss_pred CCHHHHHHHHHH-ccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccc
Q 000517 260 MTVRETVDFSAR-CQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNA 338 (1449)
Q Consensus 260 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 338 (1449)
+||+||+.++.. .++.. ..+ ....++.+++.+||++..++.+.+
T Consensus 91 ~t~~e~l~~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~- 135 (213)
T cd03262 91 LTVLENITLAPIKVKGMS----------KAE------------------------AEERALELLEKVGLADKADAYPAQ- 135 (213)
T ss_pred CcHHHHHHhHHHHhcCCC----------HHH------------------------HHHHHHHHHHHcCCHhHhhhCccc-
Confidence 999999988642 11100 000 011245678889998877777765
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++ +|...++.+++|++++|+
T Consensus 136 ----LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~tvi~~-sh~~~~~~~~~d~i~~l~ 209 (213)
T cd03262 136 ----LSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EGMTMVVV-THEMGFAREVADRVIFMD 209 (213)
T ss_pred ----cCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-cCCEEEEE-eCCHHHHHHhCCEEEEEe
Confidence 999999999999999999999999999999999999999999999876 46676665 566678889999999999
Q ss_pred CCeE
Q 000517 419 EGKI 422 (1449)
Q Consensus 419 ~G~i 422 (1449)
+|++
T Consensus 210 ~g~i 213 (213)
T cd03262 210 DGRI 213 (213)
T ss_pred CCcC
Confidence 9974
No 436
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-33 Score=319.16 Aligned_cols=207 Identities=26% Similarity=0.421 Sum_probs=169.7
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC---CCceEEEEcCCCccCCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV---PPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 261 (1449)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|+..+++.+|
T Consensus 16 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 92 (255)
T PRK11231 16 RILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGIT 92 (255)
T ss_pred EEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCcc
Confidence 5899999999999999999999999999999999999987 999999998765432 2356999999988888899
Q ss_pred HHHHHHHHHHc-cCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 262 VRETVDFSARC-QGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 262 V~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
|.||+.++... ...... ... ..+..++.+++.+||++..++.+++
T Consensus 93 v~~~i~~~~~~~~~~~~~------~~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 138 (255)
T PRK11231 93 VRELVAYGRSPWLSLWGR------LSA-------------------------EDNARVNQAMEQTRINHLADRRLTD--- 138 (255)
T ss_pred HHHHHHhccchhhhhccC------CCH-------------------------HHHHHHHHHHHHcCCHHHHcCCccc---
Confidence 99999875310 000000 000 0011246678899998878887765
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.+ .+.|+|++. |..+++.+++|++++|++|
T Consensus 139 --LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~~~tiii~t-H~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 139 --LSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-QGKTVVTVL-HDLNQASRYCDHLVVLANG 214 (255)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEE-CCHHHHHHhcCEEEEEECC
Confidence 999999999999999999999999999999999999999999999865 466766655 5566888999999999999
Q ss_pred eEEEecChhhHH
Q 000517 421 KIVYHGPQDHVL 432 (1449)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1449)
+++..|+.+++.
T Consensus 215 ~i~~~~~~~~~~ 226 (255)
T PRK11231 215 HVMAQGTPEEVM 226 (255)
T ss_pred eEEEEcCHHHhc
Confidence 999999887763
No 437
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.1e-33 Score=310.83 Aligned_cols=185 Identities=28% Similarity=0.371 Sum_probs=156.6
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCHHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEE 953 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~e 953 (1449)
+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+......++.++|++|++.+++.+|+.|
T Consensus 15 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~tv~~ 92 (207)
T PRK13539 15 RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPP--AAGTIKLDGGDIDDPDVAEACHYLGHRNAMKPALTVAE 92 (207)
T ss_pred eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEeCcchhhHhhcEEecCCCcCCCCCcHHH
Confidence 4699999999999999999999999999999999997654 58999999976432225667899999988888999999
Q ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000517 954 SVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDA 1033 (1449)
Q Consensus 954 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~ 1033 (1449)
|+.+....+. . .++.++++++.+||.+..+..++ .||||||||++||++|+.+|++|+|||||+|||+
T Consensus 93 ~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~ 160 (207)
T PRK13539 93 NLEFWAAFLG---G----EELDIAAALEAVGLAPLAHLPFG-----YLSAGQKRRVALARLLVSNRPIWILDEPTAALDA 160 (207)
T ss_pred HHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHcCChh-----hcCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 9987543321 1 12347889999999877666644 7999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 1034 RAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 1034 ~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
.+...+++.|++++++|+|||+++|++. ++ .. |+++.+.
T Consensus 161 ~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~-~~-~~~~~~~ 199 (207)
T PRK13539 161 AAVALFAELIRAHLAQGGIVIAATHIPL-GL-PG-ARELDLG 199 (207)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCCch-hh-cc-CcEEeec
Confidence 9999999999998878999999999975 34 33 8887764
No 438
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-33 Score=320.11 Aligned_cols=214 Identities=21% Similarity=0.274 Sum_probs=171.8
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCC--C-eeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTS--G-YVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~I~i~G 924 (1449)
.+.++|++++++ +..+|+|+|++|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 366777776542 24599999999999999999999999999999999996432 1 2579999999
Q ss_pred ccCc-----cccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccccC
Q 000517 925 YPKV-----QETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLVGI 995 (1449)
Q Consensus 925 ~~~~-----~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 995 (1449)
.+.. ...+++.++|++|++.+++ .|+.||+.+....+. .. ...++.++++++.+++.+ ..+..
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 148 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQS--- 148 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcCC---
Confidence 8652 1234667999999988877 599999988654321 11 123355677788888743 22333
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 149 --~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~ 224 (264)
T PRK14243 149 --GLSLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFN 224 (264)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 347999999999999999999999999999999999999999999999875 589999999986 5788999999997
Q ss_pred c--------CcEEEEecCC
Q 000517 1076 T--------GGRIIYCGPL 1086 (1449)
Q Consensus 1076 ~--------gG~~v~~G~~ 1086 (1449)
+ .|++++.|+.
T Consensus 225 ~~~~~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 225 VELTEGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccccccCceEEEeCCH
Confidence 2 5899999975
No 439
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-33 Score=319.17 Aligned_cols=204 Identities=25% Similarity=0.312 Sum_probs=169.1
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC---CCceEEEEcCCCc-cCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV---PPKTSAYISQNDL-HIAEM 260 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 260 (1449)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++..
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (277)
T PRK13642 21 NQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVGA 97 (277)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhccC
Confidence 5899999999999999999999999999999999999997 999999998875422 2457999999964 67789
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
||.||+.++....+.. +++ ....++.+++.+||.+..++.++.
T Consensus 98 tv~eni~~~~~~~~~~----------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~--- 140 (277)
T PRK13642 98 TVEDDVAFGMENQGIP----------REE------------------------MIKRVDEALLAVNMLDFKTREPAR--- 140 (277)
T ss_pred CHHHHHHhhHHHcCCC----------HHH------------------------HHHHHHHHHHHCCCHhHhhCCccc---
Confidence 9999998865322110 000 001246678889998777777655
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.| ..+++. .+|+|++|++|
T Consensus 141 --LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH-~~~~~~-~~d~i~~l~~G 216 (277)
T PRK13642 141 --LSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITH-DLDEAA-SSDRILVMKAG 216 (277)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHH-hCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999987644677777654 455564 69999999999
Q ss_pred eEEEecChhhHH
Q 000517 421 KIVYHGPQDHVL 432 (1449)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1449)
+++..|+.+++.
T Consensus 217 ~i~~~g~~~~~~ 228 (277)
T PRK13642 217 EIIKEAAPSELF 228 (277)
T ss_pred EEEEeCCHHHHh
Confidence 999999988774
No 440
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.4e-33 Score=367.91 Aligned_cols=209 Identities=28% Similarity=0.413 Sum_probs=175.8
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++++|++|+++. .++.+|+|+|++|+|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+.
T Consensus 477 ~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~i 543 (710)
T TIGR03796 477 YVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP--WSGEILFDGIPR 543 (710)
T ss_pred eEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEeH
Confidence 5889999987742 124699999999999999999999999999999999998765 589999999886
Q ss_pred cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000517 928 VQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-------IKDSLVGIPG 997 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 997 (1449)
.+ ..+++.+|||+|++.++. .|++||+.++ .++.+ ++.++++++..++.+ -.|+.+|..|
T Consensus 544 ~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~-----~~~~~----~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G 613 (710)
T TIGR03796 544 EEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLW-----DPTIP----DADLVRACKDAAIHDVITSRPGGYDAELAEGG 613 (710)
T ss_pred HHCCHHHHHhheeEEecCChhhh-ccHHHHhhCC-----CCCCC----HHHHHHHHHHhCCHHHHHhCcCcccceeccCC
Confidence 43 467889999999998875 6999999763 11222 344666777776654 3467787665
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
.+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|+++|+++ ....+|++++|+ +
T Consensus 614 -~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~-~ 686 (710)
T TIGR03796 614 -ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLE-R 686 (710)
T ss_pred -CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEe-C
Confidence 46999999999999999999999999999999999999999999986 4899999999975 467799999997 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|++++.|+.
T Consensus 687 G~i~~~G~~ 695 (710)
T TIGR03796 687 GKVVQRGTH 695 (710)
T ss_pred CEEEEecCH
Confidence 899999985
No 441
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.4e-33 Score=311.96 Aligned_cols=200 Identities=30% Similarity=0.438 Sum_probs=160.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccC--CCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHI--AEMT 261 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 261 (1449)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. ..+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCCc
Confidence 35999999999999999999999999999999999999997 9999999987642 245799999987653 3489
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+||+.++......... . .... .+..++.+++.+||++..++.+++
T Consensus 87 v~e~l~~~~~~~~~~~~--~---~~~~-------------------------~~~~~~~~l~~~~l~~~~~~~~~~---- 132 (213)
T cd03235 87 VRDVVLMGLYGHKGLFR--R---LSKA-------------------------DKAKVDEALERVGLSELADRQIGE---- 132 (213)
T ss_pred HHHHHHhcccccccccc--C---CCHH-------------------------HHHHHHHHHHHcCCHHHHhCCccc----
Confidence 99999875421100000 0 0000 011346688999998777877765
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++. |..+++.+++|++++|++|
T Consensus 133 -LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~~s-H~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 133 -LSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-EGMTILVVT-HDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEe-CCHHHHHHhcCEEEEEcCc-
Confidence 999999999999999999999999999999999999999999999876 466766654 5567888999999999886
Q ss_pred EEEec
Q 000517 422 IVYHG 426 (1449)
Q Consensus 422 iv~~G 426 (1449)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66554
No 442
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.3e-33 Score=365.38 Aligned_cols=207 Identities=27% Similarity=0.413 Sum_probs=170.9
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1449)
++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|++||.++++... ++.++||+|++.+|+ .|
T Consensus 488 ~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-gT 563 (708)
T TIGR01193 488 NILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFS-GS 563 (708)
T ss_pred cceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCceehh-HH
Confidence 5899999999999999999999999999999999999998 9999999999876653 568999999988765 59
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
++|||.++.+ |+.+.++..+++...+.. +.++ .++...||.+|+. ..
T Consensus 564 I~eNi~l~~~------------------------~~~~~~~i~~a~~~a~l~------~~i~--~lp~gldt~i~e~-G~ 610 (708)
T TIGR01193 564 ILENLLLGAK------------------------ENVSQDEIWAACEIAEIK------DDIE--NMPLGYQTELSEE-GS 610 (708)
T ss_pred HHHHHhccCC------------------------CCCCHHHHHHHHHHhCCH------HHHH--hcccccCcEecCC-CC
Confidence 9999987521 111222333333333322 1222 3778889999874 45
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
.||||||||++||||++.+|++|+||||||+||+.+...+.+.|+++ .++|+|+..|++ ++.+.+|+|++|++|+
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~IiitHr~--~~~~~~D~i~~l~~G~ 685 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTIIFVAHRL--SVAKQSDKIIVLDHGK 685 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEEEEEecch--HHHHcCCEEEEEECCE
Confidence 69999999999999999999999999999999999999999999874 367887776665 4668899999999999
Q ss_pred EEEecChhhHHH
Q 000517 422 IVYHGPQDHVLA 433 (1449)
Q Consensus 422 iv~~G~~~~~~~ 433 (1449)
++..|+++++++
T Consensus 686 i~~~G~~~~L~~ 697 (708)
T TIGR01193 686 IIEQGSHDELLD 697 (708)
T ss_pred EEEECCHHHHHh
Confidence 999999999864
No 443
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-33 Score=315.19 Aligned_cols=206 Identities=25% Similarity=0.316 Sum_probs=166.1
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCC--CC-eeEEEEEEcCccCcc-----ccccceEEEEccCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKT--SG-YVEGEIKISGYPKVQ-----ETFARVSGYCEQTDIH 945 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~I~i~G~~~~~-----~~~~~~~gyv~Q~d~~ 945 (1449)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +. +.+|+|.+||.++.. ...++.++|++|++.+
T Consensus 16 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14266 16 AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVVELRKKVGMVFQKPNP 95 (250)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHHHHhhheEEEecCCcc
Confidence 469999999999999999999999999999999999643 11 258999999987532 2346679999999888
Q ss_pred CCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000517 946 SPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMD 1025 (1449)
Q Consensus 946 ~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLD 1025 (1449)
++. |+.||+.+...... ....+...+.+.++++.++|.+........ ....||||||||++|||+|+.+|++|+||
T Consensus 96 ~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~~LS~Gq~qrv~laral~~~p~llllD 171 (250)
T PRK14266 96 FPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLDK-SALGLSGGQQQRLCIARTIAVSPEVILMD 171 (250)
T ss_pred Ccc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHhC-CcccCCHHHHHHHHHHHHHHcCCCEEEEc
Confidence 874 99999987643221 112233456788899999885422111111 23479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1026 EPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1026 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|||+|||+.+...+.+.|+++++ ++|||+++|++. ++...+|++++|. +|++++.|+.
T Consensus 172 EP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~-~G~i~~~g~~ 229 (250)
T PRK14266 172 EPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFL-NGEIIESGLT 229 (250)
T ss_pred CCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEE-CCeEEEeCCH
Confidence 99999999999999999999864 899999999986 5778889999997 5899999875
No 444
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.6e-33 Score=321.06 Aligned_cols=210 Identities=19% Similarity=0.304 Sum_probs=171.2
Q ss_pred EEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc
Q 000517 849 VAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV 928 (1449)
Q Consensus 849 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~ 928 (1449)
+.++|+++.++. +...+|+|+|++|++||+++|+|+||||||||+++|+|... .+|+|.++|.++.
T Consensus 3 i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i~ 68 (275)
T cd03289 3 MTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSWN 68 (275)
T ss_pred EEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEhh
Confidence 567777776531 12358999999999999999999999999999999999764 3799999998753
Q ss_pred c---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccC------CCCC
Q 000517 929 Q---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGI------PGVN 999 (1449)
Q Consensus 929 ~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~------~~~~ 999 (1449)
. ..+++.++|++|++.+++ .|++||+.... ... ++.+++.++.+||.+..+...+. ++..
T Consensus 69 ~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~ 137 (275)
T cd03289 69 SVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGC 137 (275)
T ss_pred hCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCCC
Confidence 2 345678999999999887 59999995321 111 24567888899998765554331 1234
Q ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000517 1000 GLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGR 1079 (1449)
Q Consensus 1000 ~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~ 1079 (1449)
.||||||||++|||||+.+|+||+|||||+|||+.+...+++.|+++. .++|||+++|+++ .+ ..+|++++|. +|+
T Consensus 138 ~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~-~G~ 213 (275)
T cd03289 138 VLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIE-ENK 213 (275)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEec-CCe
Confidence 699999999999999999999999999999999999999999999874 4899999999975 34 4699999997 589
Q ss_pred EEEecCCC
Q 000517 1080 IIYCGPLG 1087 (1449)
Q Consensus 1080 ~v~~G~~~ 1087 (1449)
+++.|++.
T Consensus 214 i~~~g~~~ 221 (275)
T cd03289 214 VRQYDSIQ 221 (275)
T ss_pred EeecCCHH
Confidence 99999874
No 445
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.5e-33 Score=363.56 Aligned_cols=206 Identities=25% Similarity=0.409 Sum_probs=166.9
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1449)
+++|+|+|++++|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|. .
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~-g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFS-G 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCccccc-c
Confidence 46899999999999999999999999999999999999998 9999999999877653 568999999887665 7
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
|+||||.++.. +.+.++..+++...+.. +.++ .+++..||.+|+. .
T Consensus 570 TIreNI~~g~~-------------------------~~~~e~i~~al~~a~l~------~~i~--~lp~GldT~ige~-G 615 (711)
T TIGR00958 570 SVRENIAYGLT-------------------------DTPDEEIMAAAKAANAH------DFIM--EFPNGYDTEVGEK-G 615 (711)
T ss_pred CHHHHHhcCCC-------------------------CCCHHHHHHHHHHcCCH------HHHH--hCCCccCCcccCC-C
Confidence 99999987521 11112223333332221 2222 2677889999974 4
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
..||||||||++||||++++|+|++||||||+||+.+...|.+ .. ...++|+|+..|++ ++.+.+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~---~~~~~TvIiItHrl--~~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR---SRASRTVLLIAHRL--STVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh---ccCCCeEEEEeccH--HHHHhCCEEEEEECC
Confidence 5699999999999999999999999999999999999999888 22 22467888776665 466789999999999
Q ss_pred eEEEecChhhHHH
Q 000517 421 KIVYHGPQDHVLA 433 (1449)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1449)
+|+.+|+++++.+
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999999875
No 446
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=7.2e-33 Score=308.09 Aligned_cols=199 Identities=21% Similarity=0.337 Sum_probs=165.5
Q ss_pred cccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC-CCceEEEEcCCCccCCCCCHHH
Q 000517 186 ILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV-PPKTSAYISQNDLHIAEMTVRE 264 (1449)
Q Consensus 186 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 264 (1449)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 467999999999999999999999999999999999997 999999999875432 2467999999999999999999
Q ss_pred HHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCC
Q 000517 265 TVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGIS 344 (1449)
Q Consensus 265 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlS 344 (1449)
|+.+...... ... . +.+..++++++.+||++..++.+.+ ||
T Consensus 90 n~~~~~~~~~-~~~--------~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~~-----LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KLN--------A-------------------------EQQEKVVDAAQQVGIADYLDRLPEQ-----LS 130 (213)
T ss_pred HHHhHhhccC-Ccc--------H-------------------------HHHHHHHHHHHHcCcHHHhhCCccc-----CC
Confidence 9987542110 000 0 0011245678999998777877765 99
Q ss_pred hhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCeEEE
Q 000517 345 GGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGKIVY 424 (1449)
Q Consensus 345 GGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~iv~ 424 (1449)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.+..+.|+|++. |..+++.+++|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vs-h~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVT-HHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEe-CCHHHHHhhcCeEEEEECCeEEE
Confidence 99999999999999999999999999999999999999999998764466666654 55667888999999999999998
Q ss_pred ecC
Q 000517 425 HGP 427 (1449)
Q Consensus 425 ~G~ 427 (1449)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 874
No 447
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.1e-32 Score=315.73 Aligned_cols=206 Identities=25% Similarity=0.338 Sum_probs=166.9
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCcc-----CCCCCC-------CceEEEEcC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYK-----LEEFVP-------PKTSAYISQ 252 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~Q 252 (1449)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++|
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q 96 (258)
T PRK11701 20 KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQ 96 (258)
T ss_pred eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEee
Confidence 5899999999999999999999999999999999999997 9999999987 544321 346899999
Q ss_pred CC--ccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc-
Q 000517 253 ND--LHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV- 329 (1449)
Q Consensus 253 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~- 329 (1449)
++ .+.+.+|++||+.+.....+... . .+ ....++++++.+|+..
T Consensus 97 ~~~~~~~~~~~~~~~i~~~~~~~~~~~-~--------~~------------------------~~~~~~~~l~~~~l~~~ 143 (258)
T PRK11701 97 HPRDGLRMQVSAGGNIGERLMAVGARH-Y--------GD------------------------IRATAGDWLERVEIDAA 143 (258)
T ss_pred CcccccCccccHHHHHHHHHHHhccCc-H--------HH------------------------HHHHHHHHHHHcCCChh
Confidence 86 36778899999976432111000 0 00 0112456788999974
Q ss_pred cccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHh
Q 000517 330 CADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFD 409 (1449)
Q Consensus 330 ~~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~ 409 (1449)
..++.+++ |||||||||+|||||+.+|++|+|||||+|||+.+...+.+.|+++.+..+.|+|++ +|...++.+
T Consensus 144 ~~~~~~~~-----LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~i-sH~~~~~~~ 217 (258)
T PRK11701 144 RIDDLPTT-----FSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIV-THDLAVARL 217 (258)
T ss_pred HHhCCCcc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEE-eCCHHHHHH
Confidence 56666655 999999999999999999999999999999999999999999999876446666655 556678888
Q ss_pred hcCeEEEEeCCeEEEecChhhHH
Q 000517 410 LFDDIILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 410 ~fD~v~lL~~G~iv~~G~~~~~~ 432 (1449)
.+|+|++|++|++++.|+++++.
T Consensus 218 ~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 218 LAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred hcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999988764
No 448
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-32 Score=317.22 Aligned_cols=207 Identities=23% Similarity=0.341 Sum_probs=164.4
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCeeeEEEECCccCCCC-----CCCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPS--LKVTGEVSYNGYKLEEF-----VPPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1449)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++|. ...+|+|+++|+++... ..++.++|++|++.++
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 112 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPF 112 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCC
Confidence 4899999999999999999999999999999999998741 01289999999887531 1245789999998877
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc----cccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV----CADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~dt 333 (1449)
+. ||+||+.++....+.... +.+ ....++.+++.+||.+ ..++
T Consensus 113 ~~-tv~enl~~~~~~~~~~~~--------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 159 (267)
T PRK14235 113 PK-SIYENVAYGPRIHGLARS--------KAE------------------------LDEIVETSLRKAGLWEEVKDRLHE 159 (267)
T ss_pred CC-cHHHHHHHHHHhcccccc--------hHH------------------------HHHHHHHHHHHcCCchhhhHHhhC
Confidence 74 999999987543221100 000 0112456788888854 2344
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.++ .|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|+|++. |..+++.+++|+
T Consensus 160 ~~~-----~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~~tiiivt-H~~~~~~~~~d~ 231 (267)
T PRK14235 160 PGT-----GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--NYTIVIVT-HSMQQAARVSQR 231 (267)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--CCeEEEEE-cCHHHHHhhCCE
Confidence 444 4999999999999999999999999999999999999999999999854 46666654 556788899999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
+++|++|+++.+|+.+++.
T Consensus 232 v~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 232 TAFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999987763
No 449
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.2e-33 Score=356.38 Aligned_cols=211 Identities=24% Similarity=0.447 Sum_probs=178.4
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++++|++|+++. +++.+|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 338 ~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p--~~G~I~i~g~~i 404 (574)
T PRK11160 338 SLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDP--QQGEILLNGQPI 404 (574)
T ss_pred eEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEh
Confidence 5889999987642 123589999999999999999999999999999999998765 589999999875
Q ss_pred cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc------ccccccCCCC
Q 000517 928 VQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI------KDSLVGIPGV 998 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~------~~~~vg~~~~ 998 (1449)
.+ ..+++.++||+|++.+++ .|++||+.++. ++ ..++.++++++..++.+. .|+.+|..+
T Consensus 405 ~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~-----~~----~~~~~i~~al~~~~l~~~i~~p~GldT~vge~g- 473 (574)
T PRK11160 405 ADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA-----PN----ASDEALIEVLQQVGLEKLLEDDKGLNAWLGEGG- 473 (574)
T ss_pred hhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC-----Cc----cCHHHHHHHHHHcCCHHHHcCccccCchhcCCC-
Confidence 43 457788999999998875 59999997742 11 123557888888888754 467777654
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCc
Q 000517 999 NGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGG 1078 (1449)
Q Consensus 999 ~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG 1078 (1449)
..||||||||++|||+|+++|++|+||||||+||+.++..+++.|+++. +++|+|+++|+++ ....+|++++|+ +|
T Consensus 474 ~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~-~G 549 (574)
T PRK11160 474 RQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMD-NG 549 (574)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEe-CC
Confidence 4699999999999999999999999999999999999999999999985 5899999999986 356799999998 58
Q ss_pred EEEEecCC
Q 000517 1079 RIIYCGPL 1086 (1449)
Q Consensus 1079 ~~v~~G~~ 1086 (1449)
++++.|+.
T Consensus 550 ~i~~~g~~ 557 (574)
T PRK11160 550 QIIEQGTH 557 (574)
T ss_pred eEEEeCCH
Confidence 99999975
No 450
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-32 Score=308.30 Aligned_cols=215 Identities=27% Similarity=0.368 Sum_probs=174.5
Q ss_pred ccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-C-CCCeeeEEEECCccCCCCCC-------CceEEEEcCC
Q 000517 183 KINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLD-P-SLKVTGEVSYNGYKLEEFVP-------PKTSAYISQN 253 (1449)
Q Consensus 183 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~-~-~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 253 (1449)
..++++||||.+++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++-.+.. .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 3569999999999999999999999999999999999998 4 33468999999997654432 3579999999
Q ss_pred C--ccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccc
Q 000517 254 D--LHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCA 331 (1449)
Q Consensus 254 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 331 (1449)
+ .+-|.+||.+.+.-..+...... .++| ....+.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------~~~e------------------------a~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------SKKE------------------------AKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------hhHH------------------------HHHHHHHHHHHcCCCCHH
Confidence 5 58899999998876655322110 0000 112345689999998642
Q ss_pred cccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhc
Q 000517 332 DTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLF 411 (1449)
Q Consensus 332 dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~f 411 (1449)
. +-+.+...|||||||||.||.||+.+|++|+.|||||+||...+.+|++.|+++.++. ++.++.++|+..-+.++|
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~-~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREK-GTALILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhc
Confidence 1 1123344599999999999999999999999999999999999999999999998854 566666789999999999
Q ss_pred CeEEEEeCCeEEEecChhhHH
Q 000517 412 DDIILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 412 D~v~lL~~G~iv~~G~~~~~~ 432 (1449)
|||+||..|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999999874
No 451
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=3.2e-33 Score=307.24 Aligned_cols=184 Identities=23% Similarity=0.315 Sum_probs=155.0
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEccCCCCCCCCC
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHSPNIT 950 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lT 950 (1449)
++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (198)
T TIGR01189 12 ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRP--DSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPELS 89 (198)
T ss_pred CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEEcccchHHhhhheEEeccCcccccCCc
Confidence 35699999999999999999999999999999999997654 58999999986432 234567899999988888899
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000517 951 VEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTG 1030 (1449)
Q Consensus 951 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsg 1030 (1449)
+.||+.+....+. .+ ++.++++++.++|.+..++.++ .||||||||++||++++.+|++++|||||+|
T Consensus 90 v~~~l~~~~~~~~-----~~--~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~la~al~~~p~llllDEPt~~ 157 (198)
T TIGR01189 90 ALENLHFWAAIHG-----GA--QRTIEDALAAVGLTGFEDLPAA-----QLSAGQQRRLALARLWLSRAPLWILDEPTTA 157 (198)
T ss_pred HHHHHHHHHHHcC-----Cc--HHHHHHHHHHcCCHHHhcCChh-----hcCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999987643321 11 2457889999999887777654 7999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEE
Q 000517 1031 LDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELIL 1073 (1449)
Q Consensus 1031 LD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~ 1073 (1449)
||+.+...+++.|++++++|.|||+++|++.. + .+++++.
T Consensus 158 LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~-~--~~~~~~~ 197 (198)
T TIGR01189 158 LDKAGVALLAGLLRAHLARGGIVLLTTHQDLG-L--VEARELR 197 (198)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEEccccc-c--cceEEee
Confidence 99999999999999987789999999999752 2 3455543
No 452
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=315.79 Aligned_cols=206 Identities=25% Similarity=0.372 Sum_probs=163.4
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCeeeEEEECCccCCCC-----CCCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLD--PSLKVTGEVSYNGYKLEEF-----VPPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1449)
++|+|+|++|++||+++|+|||||||||||++|+|.++ |+...+|+|+++|+++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 58999999999999999999999999999999999987 3212389999999987431 1245799999998888
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc----cccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV----CADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~dt 333 (1449)
+. ||+||+.|.....+.... .+ ....++.+++.+|+.+ ..++
T Consensus 106 ~~-tv~enl~~~~~~~~~~~~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~l~~ 151 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKNK---------KK------------------------LQEIVEKSLKDVALWDEVKDRLHT 151 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCCH---------HH------------------------HHHHHHHHHHHcCCchhhhhhhhC
Confidence 75 999999886543221000 00 0012345677777753 2344
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.++ .||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. ++|+|++.| ..+++.+++|+
T Consensus 152 ~~~-----~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivtH-~~~~~~~~~d~ 223 (259)
T PRK14274 152 QAL-----SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE--KYTIVIVTH-NMQQAARVSDQ 223 (259)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEEc-CHHHHHHhCCE
Confidence 444 4999999999999999999999999999999999999999999999853 567666654 55688899999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
+++|++|+++.+|+++++.
T Consensus 224 i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 224 TAFFYMGELVECNDTNKMF 242 (259)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999988874
No 453
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-33 Score=324.10 Aligned_cols=221 Identities=23% Similarity=0.336 Sum_probs=172.6
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCC---CeeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTS---GYVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~I~i~G 924 (1449)
.+.++|+++.+. .+.+|+++|++|++||+++|+|+|||||||||++|+|...+ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 466777776542 24599999999999999999999999999999999997542 13589999999
Q ss_pred ccCcc-----ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCC---------CCC-hHHHHHHHHHHHHHcCCcccc
Q 000517 925 YPKVQ-----ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAP---------EIN-SKTKAEFVNEVLETIELDAIK 989 (1449)
Q Consensus 925 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~---------~~~-~~~~~~~v~~~l~~l~L~~~~ 989 (1449)
.++.. ...++.++|++|++.+++ .||+||+.+....+... ... ....++.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87532 234567999999988777 59999999864322100 011 122346688899999885322
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcC
Q 000517 990 DSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFD 1069 (1449)
Q Consensus 990 ~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d 1069 (1449)
...... .+..||||||||++||++|+.+|+||||||||+|||+.++..+++.|+++++ +.|||+++|+++ .+.+.+|
T Consensus 191 ~~~~~~-~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLDD-NALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhcC-ccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 122111 1347999999999999999999999999999999999999999999999876 589999999986 4678899
Q ss_pred eEE-EEecCcEEEEecCC
Q 000517 1070 ELI-LLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1070 ~~~-~l~~gG~~v~~G~~ 1086 (1449)
+++ +|. +|++++.|+.
T Consensus 268 ~i~~~l~-~G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLT-GGELVEYDDT 284 (305)
T ss_pred EEEEEec-CCEEEEeCCH
Confidence 975 555 6999999986
No 454
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=7.3e-33 Score=315.61 Aligned_cols=207 Identities=24% Similarity=0.327 Sum_probs=162.7
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---cc-ccceEEEEccCCCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ET-FARVSGYCEQTDIHSPNI 949 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~-~~~~~gyv~Q~d~~~~~l 949 (1449)
+.+|+|+|++|++||+++|+|+||||||||+++|+|.....+.+|+|.++|.+... .. .++.++|++|++.+++.+
T Consensus 14 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 93 (248)
T PRK09580 14 KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEGIFMAFQYPVEIPGV 93 (248)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcceEEEecCchhccch
Confidence 45999999999999999999999999999999999974211358999999987532 11 235699999999888888
Q ss_pred CHHHHHHHHHH-hccC-C--CCChHHHHHHHHHHHHHcCCc-ccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 950 TVEESVIFSAW-LRLA-P--EINSKTKAEFVNEVLETIELD-AIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 950 Tv~e~l~f~~~-lr~~-~--~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
|+.+++.+... ++.. . ........+.+++.++.+++. +..+..+. +.||||||||++|||||+.+|++|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrv~laral~~~p~illL 169 (248)
T PRK09580 94 SNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSVN----VGFSGGEKKRNDILQMAVLEPELCIL 169 (248)
T ss_pred hHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCCC----CCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 87776643211 1110 0 011122345678899999985 34444431 26999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHh-cCeEEEEecCcEEEEecCC
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEA-FDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~-~d~~~~l~~gG~~v~~G~~ 1086 (1449)
||||+|||+.++..+.+.|+++++.|+|||++||++.. +... +|++++|. +|++++.|+.
T Consensus 170 DEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~-~~~~~~d~i~~l~-~g~i~~~g~~ 230 (248)
T PRK09580 170 DESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRI-LDYIKPDYVHVLY-QGRIVKSGDF 230 (248)
T ss_pred eCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-HHhhhCCEEEEEE-CCeEEEeCCH
Confidence 99999999999999999999998778999999999763 4444 79999997 5899999975
No 455
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-33 Score=300.52 Aligned_cols=158 Identities=30% Similarity=0.489 Sum_probs=142.0
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEccCCCCCCCCCH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHSPNITV 951 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 951 (1449)
..+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++.+++..|+
T Consensus 13 ~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (173)
T cd03230 13 KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKP--DSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLTV 90 (173)
T ss_pred eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEcccchHhhhccEEEEecCCccccCCcH
Confidence 3599999999999999999999999999999999998654 58999999987532 2345679999999988888999
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000517 952 EESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGL 1031 (1449)
Q Consensus 952 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgL 1031 (1449)
.||+. ||||||||++|||+|+.+|++++|||||+||
T Consensus 91 ~~~~~--------------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~L 126 (173)
T cd03230 91 RENLK--------------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSGL 126 (173)
T ss_pred HHHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCC
Confidence 99863 8999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000517 1032 DARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGR 1079 (1449)
Q Consensus 1032 D~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~ 1079 (1449)
|+.++..+.+.|++++++|.|+|+++|+++ ++.+.+|++++|++ |+
T Consensus 127 D~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~-g~ 172 (173)
T cd03230 127 DPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNN-GR 172 (173)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeC-CC
Confidence 999999999999999877899999999986 56678999999985 54
No 456
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.2e-32 Score=301.45 Aligned_cols=171 Identities=41% Similarity=0.706 Sum_probs=151.4
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCC--CCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNL--DPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l--~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 261 (1449)
.++|+|+|+++++|++++|+||||||||||+++|+|.+ +|. +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 45999999999999999999999999999999999999 887 9999999998764334567999999998899999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
++||+.+..++ .
T Consensus 99 ~~~~i~~~~~~-------------------------------------------------------~------------- 110 (194)
T cd03213 99 VRETLMFAAKL-------------------------------------------------------R------------- 110 (194)
T ss_pred HHHHHHHHHHh-------------------------------------------------------c-------------
Confidence 99999764210 0
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .++|+|++.|++..++.+.+|++++|++|+
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii~sh~~~~~~~~~~d~v~~l~~G~ 189 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLAD-TGRTIICSIHQPSSEIFELFDKLLLLSQGR 189 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCchHHHHHhcCEEEEEeCCE
Confidence 2999999999999999999999999999999999999999999999865 478888887776667888999999999999
Q ss_pred EEEec
Q 000517 422 IVYHG 426 (1449)
Q Consensus 422 iv~~G 426 (1449)
+++.|
T Consensus 190 i~~~~ 194 (194)
T cd03213 190 VIYFG 194 (194)
T ss_pred EEecC
Confidence 98765
No 457
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.1e-33 Score=353.85 Aligned_cols=206 Identities=28% Similarity=0.493 Sum_probs=168.5
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1449)
++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|++||.++++... ++.++||+|++.+|+ .|
T Consensus 354 ~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~t 429 (574)
T PRK11160 354 PVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-AT 429 (574)
T ss_pred cceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-cc
Confidence 5899999999999999999999999999999999999998 9999999999877653 567999999987765 69
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
++||+.++.. +.+.++..+++...+. ++.++ . ++..||.+|+. .+
T Consensus 430 i~~Ni~~~~~-------------------------~~~~~~i~~al~~~~l------~~~i~--~-p~GldT~vge~-g~ 474 (574)
T PRK11160 430 LRDNLLLAAP-------------------------NASDEALIEVLQQVGL------EKLLE--D-DKGLNAWLGEG-GR 474 (574)
T ss_pred HHHHhhcCCC-------------------------ccCHHHHHHHHHHcCC------HHHHc--C-ccccCchhcCC-CC
Confidence 9999987531 1111122222222221 11121 3 67789999975 45
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
.||||||||++|||+++++|++|+|||||++||+.++..|.+.|+++. .++|+|+..|++. ....+|+|++|++|+
T Consensus 475 ~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~~~tviiitHr~~--~~~~~d~i~~l~~G~ 550 (574)
T PRK11160 475 QLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--QNKTVLMITHRLT--GLEQFDRICVMDNGQ 550 (574)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--CCCEEEEEecChh--HHHhCCEEEEEeCCe
Confidence 599999999999999999999999999999999999999999999875 3688888777763 456799999999999
Q ss_pred EEEecChhhHHH
Q 000517 422 IVYHGPQDHVLA 433 (1449)
Q Consensus 422 iv~~G~~~~~~~ 433 (1449)
++..|+++++++
T Consensus 551 i~~~g~~~~l~~ 562 (574)
T PRK11160 551 IIEQGTHQELLA 562 (574)
T ss_pred EEEeCCHHHHHh
Confidence 999999998864
No 458
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-33 Score=330.61 Aligned_cols=222 Identities=27% Similarity=0.427 Sum_probs=190.5
Q ss_pred ccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc----ccccceEEEEccCC
Q 000517 868 GFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ----ETFARVSGYCEQTD 943 (1449)
Q Consensus 868 ~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d 943 (1449)
++.++..++|+||||++++||++||+|.||||||||+|+|+|...+ .+|+|.+||.+... +.....++.|.|+.
T Consensus 15 ~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p--~~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl 92 (500)
T COG1129 15 SKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPP--DSGEILIDGKPVAFSSPRDALAAGIATVHQEL 92 (500)
T ss_pred eEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccC--CCceEEECCEEccCCCHHHHHhCCcEEEeech
Confidence 3445667899999999999999999999999999999999997765 58999999987532 33456799999999
Q ss_pred CCCCCCCHHHHHHHHHHhcc-CCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000517 944 IHSPNITVEESVIFSAWLRL-APEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSII 1022 (1449)
Q Consensus 944 ~~~~~lTv~e~l~f~~~lr~-~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~il 1022 (1449)
.+.|++||.||+.++...+. ..-++.+...+...++|+.+++....++.++ .||+||||.|.|||||..+++||
T Consensus 93 ~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~~~~~v~-----~LsiaqrQ~VeIArAl~~~arll 167 (500)
T COG1129 93 SLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDIDPDTLVG-----DLSIAQRQMVEIARALSFDARVL 167 (500)
T ss_pred hccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCChhhhhh-----hCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999987755443 2234566777889999999999644777776 69999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC-CC-ChhHHHHHHh
Q 000517 1023 FMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL-GK-HSSQVIEYFE 1098 (1449)
Q Consensus 1023 lLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~-~~-~~~~~~~~f~ 1098 (1449)
+||||||.|+......+.+.++++.++|.+||++||..+ ++++.+|++.+|. +|+.+..++. ++ ..+++++..-
T Consensus 168 IlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~-Ei~~i~DritVlR-DG~~v~~~~~~~~~~~~~lv~~Mv 243 (500)
T COG1129 168 ILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLD-EVFEIADRITVLR-DGRVVGTRPTAAETSEDELVRLMV 243 (500)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHH-HHHHhcCEEEEEe-CCEEeeecccccCCCHHHHHHHhh
Confidence 999999999999999999999999999999999999986 8999999999997 5899999983 54 3445665554
No 459
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-32 Score=313.18 Aligned_cols=206 Identities=24% Similarity=0.365 Sum_probs=164.5
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCeeeEEEECCccCCCCC-----CCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPS--LKVTGEVSYNGYKLEEFV-----PPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 257 (1449)
.+|+|+|+++++||+++|+|||||||||||++|+|..+|. ...+|+|.++|.++.... .++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (251)
T PRK14270 18 QALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNPF 97 (251)
T ss_pred eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCcC
Confidence 5899999999999999999999999999999999998751 113899999999875321 145699999998888
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC----ccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD----VCADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~dt 333 (1449)
+ +||+||+.|.....+.... .+ ....++.+++.+||. +..++
T Consensus 98 ~-~tv~enl~~~~~~~~~~~~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 143 (251)
T PRK14270 98 P-MSIYDNVAYGPRIHGIKDK---------KE------------------------LDKIVEWALKKAALWDEVKDDLKK 143 (251)
T ss_pred C-CcHHHHHHhHHHhcCCCcH---------HH------------------------HHHHHHHHHHHcCCchhhhhHhhC
Confidence 7 8999999987543221000 00 001234567778774 23444
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.++ .||||||||++||++++.+|++++|||||+|||+.++.++.+.|+++.+ ++|+|++. |...++.+++|+
T Consensus 144 ~~~-----~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~~tiiivs-H~~~~~~~~~d~ 215 (251)
T PRK14270 144 SAL-----KLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--EYTIVIVT-HNMQQASRVSDY 215 (251)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCeEEEEE-cCHHHHHHhcCE
Confidence 444 4999999999999999999999999999999999999999999999864 46666655 456688899999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
+++|++|++++.|+.+++.
T Consensus 216 v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 216 TAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred EEEEECCeEEEeCCHHHHh
Confidence 9999999999999988874
No 460
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9e-34 Score=304.61 Aligned_cols=196 Identities=24% Similarity=0.439 Sum_probs=170.9
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC-------CCceEEEEcCCCccCCCCC
Q 000517 189 HVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV-------PPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 261 (1449)
++++..+.--+|||-|+||||||||+|+|+|+.+|+ +|+|.+||..+.+.. .+|.+|||+||..+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 567777765799999999999999999999999998 999999998764321 2578999999999999999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|+-||.|+.... .....|++.+.||++|..+.+...
T Consensus 93 VrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~R~P~~---- 128 (352)
T COG4148 93 VRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLDRYPGT---- 128 (352)
T ss_pred Eecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHhhCCCc----
Confidence 999999975321 001246788999999999998876
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
|||||||||+|||||++.|++|+||||.+.||-....+|+-.|+++.++.+.- |+.++|-..|+.+++|+|++|++|+
T Consensus 129 -LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~~IP-IlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 129 -LSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEINIP-ILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred -cCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhcCCC-EEEEecCHHHHHhhhheEEEecCCe
Confidence 99999999999999999999999999999999999999999999998865544 4556677899999999999999999
Q ss_pred EEEecChhhHHH
Q 000517 422 IVYHGPQDHVLA 433 (1449)
Q Consensus 422 iv~~G~~~~~~~ 433 (1449)
+...|+.+++.+
T Consensus 207 V~A~g~~e~v~~ 218 (352)
T COG4148 207 VKASGPLEEVWG 218 (352)
T ss_pred EEecCcHHHHhc
Confidence 999999998853
No 461
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=7.4e-33 Score=316.76 Aligned_cols=207 Identities=28% Similarity=0.430 Sum_probs=169.5
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 261 (1449)
.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+|
T Consensus 15 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (256)
T TIGR03873 15 LIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPLT 91 (256)
T ss_pred EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCCC
Confidence 5899999999999999999999999999999999999987 9999999988765322 346899999987788899
Q ss_pred HHHHHHHHHH-ccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 262 VRETVDFSAR-CQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 262 V~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
|+||+.++.. ..... . .+. + +....++.+++.+||.+..++.+++
T Consensus 92 v~e~l~~~~~~~~~~~----------------~-~~~-~-------------~~~~~~~~~l~~~~l~~~~~~~~~~--- 137 (256)
T TIGR03873 92 VRDVVALGRIPHRSLW----------------A-GDS-P-------------HDAAVVDRALARTELSHLADRDMST--- 137 (256)
T ss_pred HHHHHHhcchhhhhhc----------------c-CCC-H-------------HHHHHHHHHHHHcCcHhhhcCCccc---
Confidence 9999987531 00000 0 000 0 0011346678899998777887765
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
||||||||++||+|++.+|++++|||||+|||+.+...+.+.|+++.+ .+.|+|++. |..+++.+++|+|++|++|
T Consensus 138 --LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~s-H~~~~~~~~~d~i~~l~~G 213 (256)
T TIGR03873 138 --LSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-TGVTVVAAL-HDLNLAASYCDHVVVLDGG 213 (256)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-cCCEEEEEe-CCHHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999864 466766655 5566888999999999999
Q ss_pred eEEEecChhhHH
Q 000517 421 KIVYHGPQDHVL 432 (1449)
Q Consensus 421 ~iv~~G~~~~~~ 432 (1449)
+++..|+.+++.
T Consensus 214 ~i~~~g~~~~~~ 225 (256)
T TIGR03873 214 RVVAAGPPREVL 225 (256)
T ss_pred CEEEecCHHHhh
Confidence 999999987753
No 462
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=323.35 Aligned_cols=210 Identities=24% Similarity=0.338 Sum_probs=164.4
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCeeeEEEECCccCCCC-----CCCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPS--LKVTGEVSYNGYKLEEF-----VPPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1449)
++|+|+|+.|++|++++|+|||||||||||++|+|..++. ...+|+|.++|+++... ..++.++||+|++.++
T Consensus 96 ~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~ 175 (329)
T PRK14257 96 HVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPF 175 (329)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccC
Confidence 5899999999999999999999999999999999998631 01389999999988532 2356799999998877
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGN 337 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 337 (1449)
+.||+||+.|+....+... ++. .+...+.+++.++|.+..++.++.
T Consensus 176 -~~ti~eNi~~~~~~~~~~~----------~~~-----------------------~~~~~~~~l~~~~L~~~l~~~~~~ 221 (329)
T PRK14257 176 -EMSIFDNVAYGPRNNGIND----------RKI-----------------------LEKIVEKSLKSAALWDEVKDDLDK 221 (329)
T ss_pred -CCcHHHHHHhHHHhcCCCh----------HHH-----------------------HHHHHHHHHHHcCCcchhhhhhhC
Confidence 4899999998653321100 000 001124456666665433344443
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
....|||||||||+||||++.+|+||+|||||+|||+.+...+.++|+++.+ ++|+|++. |....+.+.+|+|++|
T Consensus 222 -~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~~Tii~iT-H~l~~i~~~~Driivl 297 (329)
T PRK14257 222 -AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--KYSIIIVT-HSMAQAQRISDETVFF 297 (329)
T ss_pred -CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEe-CCHHHHHHhCCEEEEE
Confidence 2345999999999999999999999999999999999999999999999864 46766654 5567788889999999
Q ss_pred eCCeEEEecChhhHH
Q 000517 418 AEGKIVYHGPQDHVL 432 (1449)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1449)
++|+++..|+++++.
T Consensus 298 ~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 298 YQGWIEEAGETKTIF 312 (329)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999999884
No 463
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.5e-31 Score=345.39 Aligned_cols=211 Identities=27% Similarity=0.448 Sum_probs=175.6
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++++|++|+++. +++.+|+|+|++|+|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+.
T Consensus 455 ~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p--~~G~I~idg~~i 521 (694)
T TIGR01846 455 AITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTP--QHGQVLVDGVDL 521 (694)
T ss_pred eEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEeh
Confidence 5889999987642 224589999999999999999999999999999999998765 489999999886
Q ss_pred cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000517 928 VQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-------IKDSLVGIPG 997 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 997 (1449)
.+ ..+++.++||+|++.+++ .|++||+.++. ++.+ ++.+.++++..++.+ -.|+.+|..+
T Consensus 522 ~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~~----~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g 591 (694)
T TIGR01846 522 AIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGAP----FEHVIHAAKLAGAHDFISELPQGYNTEVGEKG 591 (694)
T ss_pred hhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCCC----HHHHHHHHHHcChHHHHHhCcCccCcEecCCC
Confidence 43 467788999999988775 69999997631 1222 234556666666543 3577777655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
.+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. .++|+|++||+++ ....+|++++|+ +
T Consensus 592 -~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~-~ 666 (694)
T TIGR01846 592 -ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLE-K 666 (694)
T ss_pred -CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEe-C
Confidence 4799999999999999999999999999999999999999999999984 5899999999985 456799999998 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|++++.|+.
T Consensus 667 G~i~~~g~~ 675 (694)
T TIGR01846 667 GQIAESGRH 675 (694)
T ss_pred CEEEEeCCH
Confidence 899999985
No 464
>PRK13545 tagH teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-32 Score=331.29 Aligned_cols=192 Identities=19% Similarity=0.306 Sum_probs=162.2
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCCCCCCHHH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHSPNITVEE 953 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~~~lTv~e 953 (1449)
+.+|+|+||+|++|+++||+|||||||||||++|+|...+ .+|+|.++|.+. ++.+...+.+.+|++|
T Consensus 37 ~~IL~nVSfsI~~GEivgIiGpNGSGKSTLLkiLaGLl~P--~sGeI~I~G~~~----------~i~~~~~l~~~lTV~E 104 (549)
T PRK13545 37 HYALNNISFEVPEGEIVGIIGLNGSGKSTLSNLIAGVTMP--NKGTVDIKGSAA----------LIAISSGLNGQLTGIE 104 (549)
T ss_pred ceEEeeeEEEEeCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CceEEEECCEee----------eEEeccccCCCCcHHH
Confidence 4699999999999999999999999999999999998665 589999999641 1222334567789999
Q ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000517 954 SVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDA 1033 (1449)
Q Consensus 954 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~ 1033 (1449)
++.+..... ....+...+.++++++.++|.+..+..++ .||||||||++|||||+.+|++|+|||||+|||+
T Consensus 105 nL~l~~~~~---~~~~~e~~e~i~elLe~lgL~~~ld~~~~-----~LSGGQrQRVaLArAL~~~P~LLLLDEPTsgLD~ 176 (549)
T PRK13545 105 NIELKGLMM---GLTKEKIKEIIPEIIEFADIGKFIYQPVK-----TYSSGMKSRLGFAISVHINPDILVIDEALSVGDQ 176 (549)
T ss_pred HHHhhhhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCcc-----cCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCH
Confidence 998754332 12234445667889999999887777654 7999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1034 RAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1034 ~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
.++..+++.|+++++.|+|||+++|+++ .+...+|++++|. +|++++.|+..
T Consensus 177 ~sr~~LlelL~el~~~G~TIIIVSHdl~-~i~~l~DrIivL~-~GkIv~~G~~~ 228 (549)
T PRK13545 177 TFTKKCLDKMNEFKEQGKTIFFISHSLS-QVKSFCTKALWLH-YGQVKEYGDIK 228 (549)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhCCEEEEEE-CCEEEEECCHH
Confidence 9999999999998877999999999986 5778899999997 58999999864
No 465
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-32 Score=315.14 Aligned_cols=206 Identities=23% Similarity=0.324 Sum_probs=163.1
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCeeeEEEECCccCCCC-----CCCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLD--PSLKVTGEVSYNGYKLEEF-----VPPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1449)
++|+|+|++|++|++++|+||||||||||+++|+|.++ |....+|+|.++|.++... ..++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 48999999999999999999999999999999999986 2111389999999887421 1245799999998777
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC----ccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD----VCADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~dt 333 (1449)
+ .||+||+.+......... ..+ .+..++++++.+||. +..++
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~---------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 152 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLS---------RAE------------------------MDERVEWALTKAALWNEVKDKLHQ 152 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCC---------HHH------------------------HHHHHHHHHHHcCCChhhHHHHhc
Confidence 7 899999988654221000 000 011245678888874 23445
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.++ .||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++. |...++.+++|+
T Consensus 153 ~~~-----~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~~tiii~s-H~~~~~~~~~d~ 224 (260)
T PRK10744 153 SGY-----SLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ--DYTVVIVT-HNMQQAARCSDY 224 (260)
T ss_pred CCC-----CCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEe-CCHHHHHHhCCE
Confidence 444 4999999999999999999999999999999999999999999999852 56666654 556678889999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
+++|++|+++..|+.+++.
T Consensus 225 i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 225 TAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 466
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.6e-33 Score=296.19 Aligned_cols=209 Identities=22% Similarity=0.370 Sum_probs=185.9
Q ss_pred cccccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCCCceEEEEcCCCccCCCCC
Q 000517 182 AKINILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVPPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 182 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 261 (1449)
.++++++|+|+.++||+|++++|||||||||.+++|.|.+.|+ +|+|+++|.+++... +.++||.|.+--+++.+|
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~t 88 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEERGLYPKMT 88 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhhccCccCc
Confidence 3467999999999999999999999999999999999999998 999999999886543 457999999999999999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
|.|.|.|-++++|....+ .....+++|+.+++......+|-+
T Consensus 89 v~dql~yla~LkGm~~~e----------------------------------~~~~~~~wLer~~i~~~~~~kIk~---- 130 (300)
T COG4152 89 VEDQLKYLAELKGMPKAE----------------------------------IQKKLQAWLERLEIVGKKTKKIKE---- 130 (300)
T ss_pred HHHHHHHHHHhcCCcHHH----------------------------------HHHHHHHHHHhccccccccchHHH----
Confidence 999999999998864321 112357789999999888888765
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
||-|.+|++-+-.+++++|++++||||+|||||.++..+-+.+.++.. .|.|+|.+. |..+.+.++||++++|++|+
T Consensus 131 -LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~-~GatIifSs-H~Me~vEeLCD~llmL~kG~ 207 (300)
T COG4152 131 -LSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKE-EGATIIFSS-HRMEHVEELCDRLLMLKKGQ 207 (300)
T ss_pred -hhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHh-cCCEEEEec-chHHHHHHHhhhhheecCCc
Confidence 999999999999999999999999999999999999999999999875 578888775 56889999999999999999
Q ss_pred EEEecChhhHHHHH
Q 000517 422 IVYHGPQDHVLAFF 435 (1449)
Q Consensus 422 iv~~G~~~~~~~~F 435 (1449)
.|.+|+.++++.-|
T Consensus 208 ~V~~G~v~~ir~~~ 221 (300)
T COG4152 208 TVLYGTVEDIRRSF 221 (300)
T ss_pred eEEeccHHHHHHhc
Confidence 99999999998744
No 467
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.1e-33 Score=364.21 Aligned_cols=210 Identities=27% Similarity=0.433 Sum_probs=174.1
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++|+|++|+++.. .++.+|+|+|++|+|||++||+||||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 478 ~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~i 545 (711)
T TIGR00958 478 LIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQP--TGGQVLLDGVPL 545 (711)
T ss_pred eEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCEEEECCEEH
Confidence 58899999987521 124699999999999999999999999999999999998765 589999999886
Q ss_pred cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc-------ccccccCCC
Q 000517 928 VQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI-------KDSLVGIPG 997 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~~ 997 (1449)
.+ ..+++.++||+|++.++. .|++|||.++. ++.+ ++.++++++..++.+. .|+.+|..|
T Consensus 546 ~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~-----~~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 615 (711)
T TIGR00958 546 VQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL-----TDTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGEKG 615 (711)
T ss_pred HhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC-----CCCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccCCC
Confidence 43 457788999999998875 69999998741 1222 3456777777776543 577787655
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
..||||||||++|||||+++|+||+||||||+||+.+...+++ .. ..+++|+|+++|+++ ..+.+|++++|+ +
T Consensus 616 -~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~-~ 688 (711)
T TIGR00958 616 -SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLK-K 688 (711)
T ss_pred -CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEE-C
Confidence 4699999999999999999999999999999999999999998 22 235899999999975 567899999997 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|++++.|+.
T Consensus 689 G~ive~Gt~ 697 (711)
T TIGR00958 689 GSVVEMGTH 697 (711)
T ss_pred CEEEEeeCH
Confidence 899999985
No 468
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=314.98 Aligned_cols=207 Identities=25% Similarity=0.352 Sum_probs=165.4
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CeeeEEEECCccCCCC-----CCCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSL--KVTGEVSYNGYKLEEF-----VPPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1449)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|.- ..+|+|.++|+++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 58999999999999999999999999999999999987410 1389999999876421 1245799999999899
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC----ccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD----VCADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~dt 333 (1449)
+.+||+||+.++....+.... ++ .+..++.+++.+||. +..++
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 144 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRNK---------KD------------------------LDELVEKSLRGANLWNEVKDRLDK 144 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCCH---------HH------------------------HHHHHHHHHHHcCCchhhhhHhhC
Confidence 999999999887543211000 00 011245677888874 33455
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.+++ |||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ ++|+|++ +|...++.+++|+
T Consensus 145 ~~~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tviiv-sH~~~~~~~~~d~ 216 (258)
T PRK14241 145 PGGG-----LSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--DYTIVIV-THNMQQAARVSDQ 216 (258)
T ss_pred Cccc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEE-ecCHHHHHHhCCE
Confidence 5544 999999999999999999999999999999999999999999999853 4666665 4556788899999
Q ss_pred EEEEe------CCeEEEecChhhHH
Q 000517 414 IILMA------EGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~------~G~iv~~G~~~~~~ 432 (1449)
|++|+ +|++++.|+++++.
T Consensus 217 i~~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 217 TAFFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EEEEecccCCCCceEEecCCHHHHH
Confidence 99997 79999999988764
No 469
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=3.2e-33 Score=312.62 Aligned_cols=195 Identities=25% Similarity=0.414 Sum_probs=159.8
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCCCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSPNIT 950 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~lT 950 (1449)
+.+|+|+|+++++|++++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 17 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 93 (220)
T cd03245 17 IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKP--TSGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFY-GT 93 (220)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCeEEECCEEhHHCCHHHHHhhEEEeCCCCcccc-ch
Confidence 4599999999999999999999999999999999998654 48999999986532 234567999999988776 69
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccccccccc------CCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 951 VEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVG------IPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 951 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg------~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
+.||+.+... . .. .+.+.++++.+++.+..+.... ......||||||||++||++|+.+|++|+|
T Consensus 94 v~e~l~~~~~-----~-~~---~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~llll 164 (220)
T cd03245 94 LRDNITLGAP-----L-AD---DERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLL 164 (220)
T ss_pred HHHHhhcCCC-----C-CC---HHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999876311 1 11 2345678888898876665431 012347999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEec
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCG 1084 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G 1084 (1449)
||||+|||+.++..+++.|+++++ ++|||++||++.. .+.+|++++|. +|++++.|
T Consensus 165 DEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~~--~~~~d~v~~l~-~g~i~~~~ 220 (220)
T cd03245 165 DEPTSAMDMNSEERLKERLRQLLG-DKTLIIITHRPSL--LDLVDRIIVMD-SGRIVADG 220 (220)
T ss_pred eCccccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHHH--HHhCCEEEEEe-CCeEeecC
Confidence 999999999999999999999875 4899999999863 47899999997 58887754
No 470
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3e-33 Score=363.59 Aligned_cols=211 Identities=27% Similarity=0.459 Sum_probs=177.6
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPK 927 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~ 927 (1449)
.++++|++|+++. .++.+|+|+|++|+|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+.
T Consensus 463 ~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~l 529 (694)
T TIGR03375 463 EIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQP--TEGSVLLDGVDI 529 (694)
T ss_pred eEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEh
Confidence 5889999988742 124599999999999999999999999999999999998765 589999999886
Q ss_pred cc---ccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc-------cccccccCCC
Q 000517 928 VQ---ETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA-------IKDSLVGIPG 997 (1449)
Q Consensus 928 ~~---~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~ 997 (1449)
.+ ..+|+.++||+|++.++. .|++|||.++. ++.+ ++.++++++..++.+ -.|+.+|..|
T Consensus 530 ~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~-----~~~~----~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G 599 (694)
T TIGR03375 530 RQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA-----PYAD----DEEILRAAELAGVTEFVRRHPDGLDMQIGERG 599 (694)
T ss_pred hhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC-----CCCC----HHHHHHHHHHcChHHHHHhCcccccceecCCC
Confidence 43 467889999999998876 59999997631 1222 344566677666543 3577888765
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecC
Q 000517 998 VNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTG 1077 (1449)
Q Consensus 998 ~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~g 1077 (1449)
. .||||||||++|||||+++|+||+||||||+||+.+...+++.|+++. +++|+|+++|+++ ..+.+|++++|+ +
T Consensus 600 ~-~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~-~ 674 (694)
T TIGR03375 600 R-SLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMD-N 674 (694)
T ss_pred C-CCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEe-C
Confidence 4 699999999999999999999999999999999999999999999975 4899999999985 468899999997 5
Q ss_pred cEEEEecCC
Q 000517 1078 GRIIYCGPL 1086 (1449)
Q Consensus 1078 G~~v~~G~~ 1086 (1449)
|++++.|+.
T Consensus 675 G~i~e~G~~ 683 (694)
T TIGR03375 675 GRIVADGPK 683 (694)
T ss_pred CEEEeeCCH
Confidence 899999985
No 471
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-32 Score=313.99 Aligned_cols=206 Identities=22% Similarity=0.305 Sum_probs=163.6
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCeeeEEEECCccCCCCC-----CCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPS--LKVTGEVSYNGYKLEEFV-----PPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 257 (1449)
++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.++
T Consensus 34 ~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 113 (267)
T PRK14237 34 EAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNPF 113 (267)
T ss_pred eeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCccc
Confidence 5899999999999999999999999999999999998641 123899999999875321 245799999998877
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc----cccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV----CADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~dt 333 (1449)
+ .||+||+.++....+.... .+ .+..++.+++.+||.+ ..+.
T Consensus 114 ~-~tv~eni~~~~~~~~~~~~---------~~------------------------~~~~~~~~l~~~~l~~~i~~~~~~ 159 (267)
T PRK14237 114 A-KSIYENITFALERAGVKDK---------KV------------------------LDEIVETSLKQAALWDQVKDDLHK 159 (267)
T ss_pred c-ccHHHHHHhHHHhcCCCCH---------HH------------------------HHHHHHHHHHHcCCCchhhhhhcC
Confidence 7 6999999886543211000 00 0112455678888853 2344
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.+ +.||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++. |..+++.++||+
T Consensus 160 ~~-----~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiii~t-H~~~~~~~~~d~ 231 (267)
T PRK14237 160 SA-----LTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK--NYTIIIVT-HNMQQAARASDY 231 (267)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEe-cCHHHHHHhcCE
Confidence 43 44999999999999999999999999999999999999999999999843 56666655 555678899999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
+++|++|++++.|+.+++.
T Consensus 232 i~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 232 TAFFYLGDLIEYDKTRNIF 250 (267)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999988874
No 472
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-33 Score=318.64 Aligned_cols=195 Identities=27% Similarity=0.387 Sum_probs=156.6
Q ss_pred eeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCCCCCCCCH
Q 000517 875 RLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSPNITV 951 (1449)
Q Consensus 875 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~lTv 951 (1449)
.+|+|+||++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++ .||
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDV--DSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccC--CCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 589999999999999999999999999999999998664 58999999976432 234567999999988776 699
Q ss_pred HHHHHHHHHhccCCCCChHHHH-----HHHHHHHHHc--CCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEE
Q 000517 952 EESVIFSAWLRLAPEINSKTKA-----EFVNEVLETI--ELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFM 1024 (1449)
Q Consensus 952 ~e~l~f~~~lr~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illL 1024 (1449)
+||+.+... ........ ..+++.++.+ ++.+..+.. +..||||||||++||++|+.+|++++|
T Consensus 93 ~enl~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~lllL 162 (234)
T cd03251 93 AENIAYGRP-----GATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GVKLSGGQRQRIAIARALLKDPPILIL 162 (234)
T ss_pred HHHhhccCC-----CCCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999976421 11111111 1234445554 454444443 347999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1025 DEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1025 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
||||+|||+.+...+.+.|+++. +|+|||++||++. ++ ..+|++++|. +|++++.|+.
T Consensus 163 DEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~~l~-~G~i~~~~~~ 220 (234)
T cd03251 163 DEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIVVLE-DGKIVERGTH 220 (234)
T ss_pred eCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEec-CCeEeeeCCH
Confidence 99999999999999999999986 4899999999986 35 4599999997 5899988875
No 473
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.3e-32 Score=347.88 Aligned_cols=209 Identities=26% Similarity=0.428 Sum_probs=168.8
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1449)
.++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+++.
T Consensus 331 ~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~- 406 (544)
T TIGR01842 331 KPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPT---SGSVRLDGADLKQWDRETFGKHIGYLPQDVELFPG- 406 (544)
T ss_pred ccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEehhhCCHHHHhhheEEecCCcccccc-
Confidence 35899999999999999999999999999999999999998 9999999998876543 5689999999887764
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
|++||+.+... +.+.++..+++...+ .++.++. |++..||.+|+. .
T Consensus 407 ti~~Ni~~~~~-------------------------~~~~~~~~~~~~~~~------~~~~i~~--l~~gl~t~~~~~-g 452 (544)
T TIGR01842 407 TVAENIARFGE-------------------------NADPEKIIEAAKLAG------VHELILR--LPDGYDTVIGPG-G 452 (544)
T ss_pred cHHHHHhccCC-------------------------CCCHHHHHHHHHHhC------hHHHHHh--CccccccccCCC-c
Confidence 99999975321 011112222222211 2334443 566678888864 4
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
+.||||||||++||||++++|++++|||||+|||+.++..+.+.|+++.. .++|+++..|++. ..+.||+|++|++|
T Consensus 453 ~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~ith~~~--~~~~~d~i~~l~~G 529 (544)
T TIGR01842 453 ATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKA-RGITVVVITHRPS--LLGCVDKILVLQDG 529 (544)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhh-CCCEEEEEeCCHH--HHHhCCEEEEEECC
Confidence 56999999999999999999999999999999999999999999998753 4678888777763 56789999999999
Q ss_pred eEEEecChhhHHH
Q 000517 421 KIVYHGPQDHVLA 433 (1449)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1449)
++++.|+++++.+
T Consensus 530 ~i~~~g~~~~l~~ 542 (544)
T TIGR01842 530 RIARFGERDEVLA 542 (544)
T ss_pred EEEeeCCHHHHhh
Confidence 9999999988753
No 474
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-32 Score=312.16 Aligned_cols=207 Identities=23% Similarity=0.317 Sum_probs=165.3
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCeeeEEEECCccCCCC-----CCCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLD--PSLKVTGEVSYNGYKLEEF-----VPPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1449)
.+|+|+|+.|++||+++|+||||||||||+++|+|.++ |+...+|+|.++|+++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (252)
T PRK14256 18 HAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNPF 97 (252)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCCC
Confidence 58999999999999999999999999999999999986 3111389999999887432 1245799999999899
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc----cccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV----CADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~dt 333 (1449)
+.+||+||+.++.+..+.... .+ .+..++.+++.+|+.. ..++
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 144 (252)
T PRK14256 98 PAMSIYDNVIAGYKLNGRVNR---------SE------------------------ADEIVESSLKRVALWDEVKDRLKS 144 (252)
T ss_pred CcCcHHHHHHhHHHhcCCCCH---------HH------------------------HHHHHHHHHHHcCCchhhhHHhhC
Confidence 999999999876543211000 00 0012456778888753 2344
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.++ .||||||||++||++++.+|++++|||||+|||+.++.++.+.|+++.+ ++|+|++. |..+++.++||+
T Consensus 145 ~~~-----~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~~tiiivs-H~~~~~~~~~d~ 216 (252)
T PRK14256 145 NAM-----ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--KYTIIIVT-HNMQQAARVSDY 216 (252)
T ss_pred CcC-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCcEEEEE-CCHHHHHhhCCE
Confidence 444 4999999999999999999999999999999999999999999999864 46666654 556788899999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
+++|++|+++..|+.+++.
T Consensus 217 i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 217 TAFFYMGDLVECGETKKIF 235 (252)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988763
No 475
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-32 Score=311.90 Aligned_cols=207 Identities=21% Similarity=0.317 Sum_probs=164.1
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC---CCceEEEEcCCCccCCCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV---PPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 261 (1449)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|....+|+|+++|+++.+.. .++.++|++|++.+++ .|
T Consensus 16 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~t 94 (246)
T PRK14269 16 QALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-KS 94 (246)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-cc
Confidence 5899999999999999999999999999999999997531112899999999876532 2457999999988776 69
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc----cccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV----CADTMVGN 337 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~dt~vg~ 337 (1449)
|+||+.++...++.... ..+ .+..++.+++.+||.. ..+..+
T Consensus 95 v~eni~~~~~~~~~~~~--------~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~~~-- 140 (246)
T PRK14269 95 IYENISYAPKLHGMIKN--------KDE------------------------EEALVVDCLQKVGLFEEVKDKLKQNA-- 140 (246)
T ss_pred HHHHhhhHHhhcCcccC--------hHH------------------------HHHHHHHHHHHcCCChhhhHHhcCCc--
Confidence 99999986543221000 000 0112456788888853 233333
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
+.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|++++. |..+++.+++|++++|
T Consensus 141 ---~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~t-H~~~~~~~~~d~i~~l 214 (246)
T PRK14269 141 ---LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH--NLSMIMVT-HNMQQGKRVADYTAFF 214 (246)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEe-cCHHHHHhhCcEEEEE
Confidence 45999999999999999999999999999999999999999999999853 56766654 5567788999999999
Q ss_pred eCCeEEEecChhhHH
Q 000517 418 AEGKIVYHGPQDHVL 432 (1449)
Q Consensus 418 ~~G~iv~~G~~~~~~ 432 (1449)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 215 HLGELIEFGESKEFF 229 (246)
T ss_pred ECCEEEEECCHHHHH
Confidence 999999999988764
No 476
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-32 Score=311.94 Aligned_cols=206 Identities=25% Similarity=0.354 Sum_probs=162.7
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCeeeEEEECCccCCCC-----CCCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLD--PSLKVTGEVSYNGYKLEEF-----VPPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1449)
.+|+|+|+++++||+++|+|||||||||||++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 58999999999999999999999999999999999853 5222389999999887431 1245799999998877
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc----cccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV----CADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~dt 333 (1449)
+ +||+||+.++....+.... + + .+..++.+++.+|+.. ..++
T Consensus 99 ~-~tv~enl~~~~~~~~~~~~-~--------~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 144 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKDK-Q--------V------------------------LDEAVEKSLKGASIWDEVKDRLHD 144 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCcH-H--------H------------------------HHHHHHHHHHHcCCchhHHHHHhc
Confidence 6 8999999987543221100 0 0 0012345677777642 2344
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.++ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|+|++. |..+++.+.+|+
T Consensus 145 ~~~-----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~~s-H~~~~~~~~~d~ 216 (252)
T PRK14239 145 SAL-----GLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--DYTMLLVT-RSMQQASRISDR 216 (252)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--CCeEEEEE-CCHHHHHHhCCE
Confidence 444 4999999999999999999999999999999999999999999999853 46666654 556688899999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
|++|++|++++.|+.+++.
T Consensus 217 i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 217 TGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988874
No 477
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.4e-33 Score=317.46 Aligned_cols=196 Identities=27% Similarity=0.396 Sum_probs=154.1
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCCCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSPNIT 950 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~lT 950 (1449)
+.+|+|+||++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDP--TSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCC--CCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 4599999999999999999999999999999999998654 58999999976532 234567999999988775 69
Q ss_pred HHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccccc-------ccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEE
Q 000517 951 VEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKD-------SLVGIPGVNGLSTEQRKRLTIAVELVANPSIIF 1023 (1449)
Q Consensus 951 v~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-------~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~ill 1023 (1449)
|+||+.+.... ...+ .+++.++..++.+..+ +.... .+..||||||||++||++|+.+|++|+
T Consensus 93 v~e~l~~~~~~-----~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~LS~G~~qrv~la~al~~~p~lll 162 (238)
T cd03249 93 IAENIRYGKPD-----ATDE----EVEEAAKKANIHDFIMSLPDGYDTLVGE-RGSQLSGGQKQRIAIARALLRNPKILL 162 (238)
T ss_pred HHHHhhccCCC-----CCHH----HHHHHHHHcChHHHHHhhccccceeecc-CCccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999764211 1111 1223333333322211 11111 135799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1024 MDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1024 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|||||+|||+.++..+++.|++++ +|+|||+++|+++ ++ +.+|++++|. +|++++.|+.
T Consensus 163 lDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~-~G~i~~~~~~ 221 (238)
T cd03249 163 LDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQ-NGQVVEQGTH 221 (238)
T ss_pred EeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEE-CCEEEEeCCH
Confidence 999999999999999999999987 7999999999986 34 4799999998 5899998875
No 478
>TIGR03771 anch_rpt_ABC anchored repeat-type ABC transporter, ATP-binding subunit. This protein family is the ATP-binding cassette subunit of binding protein-dependent ABC transporter complex that strictly co-occurs with TIGR03769. TIGRFAMs model TIGR03769 describes a protein domain that occurs singly or as one of up to three repeats in proteins of a number of Actinobacteria, including Propionibacterium acnes KPA171202. The TIGR03769 domain occurs both in an adjacent gene for the substrate-binding protein and in additional (often nearby) proteins, often with LPXTG-like sortase recognition signals. Homologous ATP-binding subunits outside the scope of this family include manganese transporter MntA in Synechocystis sp. PCC 6803 and chelated iron transporter subunits. The function of this transporter complex is unknown.
Probab=100.00 E-value=1.1e-32 Score=308.64 Aligned_cols=195 Identities=29% Similarity=0.418 Sum_probs=160.9
Q ss_pred eEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCccccccceEEEEccCCCCC--CCCCHHHHHHHHH
Q 000517 882 GSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQETFARVSGYCEQTDIHS--PNITVEESVIFSA 959 (1449)
Q Consensus 882 ~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~~~~~~~~gyv~Q~d~~~--~~lTv~e~l~f~~ 959 (1449)
++|++||+++|+|+||||||||+++|+|..++ .+|+|.+||.+.. ..++.++|++|++.++ ..+|+.||+.+..
T Consensus 1 l~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~ 76 (223)
T TIGR03771 1 LSADKGELLGLLGPNGAGKTTLLRAILGLIPP--AKGTVKVAGASPG--KGWRHIGYVPQRHEFAWDFPISVAHTVMSGR 76 (223)
T ss_pred CccCCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCccch--HhhCcEEEecccccccCCCCccHHHHHHhcc
Confidence 46889999999999999999999999997665 4899999998753 2356799999998653 3489999998753
Q ss_pred HhccC-CCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHH
Q 000517 960 WLRLA-PEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAI 1038 (1449)
Q Consensus 960 ~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~ 1038 (1449)
..... ........++.+.++++.+++.+..++.++ .||||||||++|||+|+.+|++|+|||||+|||+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~qrv~laral~~~p~llilDEP~~~LD~~~~~~ 151 (223)
T TIGR03771 77 TGHIGWLRRPCVADFAAVRDALRRVGLTELADRPVG-----ELSGGQRQRVLVARALATRPSVLLLDEPFTGLDMPTQEL 151 (223)
T ss_pred ccccccccCCcHHHHHHHHHHHHHhCCchhhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHH
Confidence 21100 001112334568899999999887777654 799999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCCC
Q 000517 1039 VMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLGK 1088 (1449)
Q Consensus 1039 i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~~ 1088 (1449)
+.+.|++++++|+|||++||+++ ++.+.+|+++++ + |++++.|+..+
T Consensus 152 l~~~l~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l-~-G~i~~~~~~~~ 198 (223)
T TIGR03771 152 LTELFIELAGAGTAILMTTHDLA-QAMATCDRVVLL-N-GRVIADGTPQQ 198 (223)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeecCHHH
Confidence 99999999877999999999986 577889999988 4 89999998753
No 479
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.6e-32 Score=306.92 Aligned_cols=196 Identities=28% Similarity=0.388 Sum_probs=163.9
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC------CCceEEEEcCCCccC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV------PPKTSAYISQNDLHI 257 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 257 (1449)
..+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQ---EGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLL 94 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhc
Confidence 46999999999999999999999999999999999999987 999999999875432 135799999999889
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGN 337 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 337 (1449)
+.+|+.||+.++....... ..++ ....++++++.+||.+..++.+.+
T Consensus 95 ~~~t~~~n~~~~~~~~~~~---------~~~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 141 (220)
T TIGR02982 95 GFLTARQNVQMALELQPNL---------SYQE------------------------ARERARAMLEAVGLGDHLDYYPHN 141 (220)
T ss_pred CCCCHHHHHHHHHHhccCC---------CHHH------------------------HHHHHHHHHHHcCChhhhhcChhh
Confidence 9999999999865432100 0000 011246688999998777777654
Q ss_pred cccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEE
Q 000517 338 AMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILM 417 (1449)
Q Consensus 338 ~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL 417 (1449)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+..++|+|++.|++ . +.+.+|+|++|
T Consensus 142 -----lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~-~-~~~~~d~v~~l 214 (220)
T TIGR02982 142 -----LSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDN-R-ILDVADRIVHM 214 (220)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-H-HHhhCCEEEEE
Confidence 9999999999999999999999999999999999999999999998765578888877765 3 56899999999
Q ss_pred eCCeE
Q 000517 418 AEGKI 422 (1449)
Q Consensus 418 ~~G~i 422 (1449)
.+|++
T Consensus 215 ~~g~~ 219 (220)
T TIGR02982 215 EDGKL 219 (220)
T ss_pred ECCEE
Confidence 99986
No 480
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-33 Score=315.10 Aligned_cols=196 Identities=27% Similarity=0.403 Sum_probs=156.3
Q ss_pred eeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc---ccccceEEEEccCCCCCCCCCH
Q 000517 875 RLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ---ETFARVSGYCEQTDIHSPNITV 951 (1449)
Q Consensus 875 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~---~~~~~~~gyv~Q~d~~~~~lTv 951 (1449)
.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++.. ..+++.++|++|++.+++. |+
T Consensus 17 ~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv 93 (229)
T cd03254 17 PVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDP--QKGQILIDGIDIRDISRKSLRSMIGVVLQDTFLFSG-TI 93 (229)
T ss_pred ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEeHHHcCHHHHhhhEEEecCCchhhhh-HH
Confidence 599999999999999999999999999999999998654 58999999976532 2356679999999887765 99
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccc-c-----CCCCCCCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000517 952 EESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLV-G-----IPGVNGLSTEQRKRLTIAVELVANPSIIFMD 1025 (1449)
Q Consensus 952 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~v-g-----~~~~~~LSgGqrqRl~Ia~aL~~~p~illLD 1025 (1449)
+||+.+... ... ...+++.++.+++.+..+... | ......||||||||++||++|+.+|++|+||
T Consensus 94 ~~~~~~~~~-----~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~llllD 164 (229)
T cd03254 94 MENIRLGRP-----NAT----DEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPKILILD 164 (229)
T ss_pred HHHHhccCC-----CCC----HHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999976421 111 123444555555544332221 0 1123579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1026 EPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1026 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|||+|||+.++..+++.|++++ +|+|||++||+++ ++ +.+|++++|. +|++++.|+.
T Consensus 165 EP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~-~g~~~~~~~~ 221 (229)
T cd03254 165 EATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLD-DGKIIEEGTH 221 (229)
T ss_pred CccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEe-CCeEEEeCCH
Confidence 9999999999999999999985 5899999999986 34 5699999997 5899988864
No 481
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=316.29 Aligned_cols=215 Identities=24% Similarity=0.272 Sum_probs=172.7
Q ss_pred EEEEecceeeeecccchhccccccccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 000517 848 TVAFQDLKYYVDTPLEMRERGFADRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG---YVEGEIKISG 924 (1449)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~I~i~G 924 (1449)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 16 ~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g 82 (265)
T PRK14252 16 KSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHP 82 (265)
T ss_pred eEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcC
Confidence 467777776542 236999999999999999999999999999999999976531 2589999999
Q ss_pred ccCc-------cccccceEEEEccCCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcc----cccccc
Q 000517 925 YPKV-------QETFARVSGYCEQTDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDA----IKDSLV 993 (1449)
Q Consensus 925 ~~~~-------~~~~~~~~gyv~Q~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~v 993 (1449)
.+.. ...+++.++|++|++.+++. |++||+.+....... ......++.++++++.+++.+ ..+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~- 158 (265)
T PRK14252 83 DNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRGV--KRRSILEERVENALRNAALWDEVKDRLGDL- 158 (265)
T ss_pred ccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcCC--ChHHHHHHHHHHHHHHcCCchhhhHHHhCC-
Confidence 7542 12346679999999988875 999999876433211 111223456778888888742 23333
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEE
Q 000517 994 GIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELIL 1073 (1449)
Q Consensus 994 g~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~ 1073 (1449)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++
T Consensus 159 ----~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~~ 232 (265)
T PRK14252 159 ----AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTAY 232 (265)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEEE
Confidence 247999999999999999999999999999999999999999999999875 699999999986 57788999999
Q ss_pred EecCcEEEEecCC
Q 000517 1074 LKTGGRIIYCGPL 1086 (1449)
Q Consensus 1074 l~~gG~~v~~G~~ 1086 (1449)
|. +|+++..|+.
T Consensus 233 l~-~G~i~~~g~~ 244 (265)
T PRK14252 233 MY-MGELIEFGAT 244 (265)
T ss_pred EE-CCEEEEeCCH
Confidence 97 5899999875
No 482
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-32 Score=315.99 Aligned_cols=212 Identities=28% Similarity=0.387 Sum_probs=168.8
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-----CCeeeEEEECCccCCCCCC---CceEEEEcCCCcc
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPS-----LKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLH 256 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~-----~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~ 256 (1449)
.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|.++..... ++.++|++|++..
T Consensus 15 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~~ 94 (272)
T PRK13547 15 AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQP 94 (272)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCCC
Confidence 5899999999999999999999999999999999999874 1137999999988754322 3458999999876
Q ss_pred CCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccc
Q 000517 257 IAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVG 336 (1449)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 336 (1449)
++.+||+||+.++......... .... +....++.+++.+||++..++.++
T Consensus 95 ~~~~tv~e~l~~~~~~~~~~~~-----~~~~-------------------------~~~~~~~~~l~~~~l~~~~~~~~~ 144 (272)
T PRK13547 95 AFAFSAREIVLLGRYPHARRAG-----ALTH-------------------------RDGEIAWQALALAGATALVGRDVT 144 (272)
T ss_pred CCCCcHHHHHhhcccccccccc-----cCCH-------------------------HHHHHHHHHHHHcCcHhhhcCCcc
Confidence 6779999999875311000000 0000 001124668899999877777766
Q ss_pred ccccccCChhhhhhHHHHHHHh---------CCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhH
Q 000517 337 NAMRRGISGGQKKRLTTGEMIV---------GPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPET 407 (1449)
Q Consensus 337 ~~~~rGlSGGqrkRvsia~al~---------~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~ 407 (1449)
+ |||||||||+||++|+ .+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++. |..+++
T Consensus 145 ~-----LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiis-H~~~~~ 218 (272)
T PRK13547 145 T-----LSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIV-HDPNLA 218 (272)
T ss_pred c-----CCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEE-CCHHHH
Confidence 5 9999999999999999 599999999999999999999999999998764467776665 456678
Q ss_pred HhhcCeEEEEeCCeEEEecChhhHH
Q 000517 408 FDLFDDIILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 408 ~~~fD~v~lL~~G~iv~~G~~~~~~ 432 (1449)
.+++|++++|++|++++.|+.+++.
T Consensus 219 ~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 219 ARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHhCCEEEEEECCeEEEecCHHHHc
Confidence 8899999999999999999987763
No 483
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-32 Score=312.27 Aligned_cols=205 Identities=22% Similarity=0.315 Sum_probs=163.5
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCC---CCCCCCeeeEEEECCccCCCCC-----CCceEEEEcCCCcc
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGN---LDPSLKVTGEVSYNGYKLEEFV-----PPKTSAYISQNDLH 256 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~---l~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 256 (1449)
++|+|+|+.+++|++++|+||||||||||+++|+|. .+|. ..+|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 95 (250)
T PRK14245 17 HALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNP 95 (250)
T ss_pred eEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCcc
Confidence 589999999999999999999999999999999997 3331 13899999999875421 13569999999887
Q ss_pred CCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcc----cc
Q 000517 257 IAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVC----AD 332 (1449)
Q Consensus 257 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~----~d 332 (1449)
++ .||+||+.++....+.... +. .+..++++++.+||.+. .+
T Consensus 96 ~~-~tv~~nl~~~~~~~~~~~~----------~~-----------------------~~~~~~~~l~~~~l~~~~~~~~~ 141 (250)
T PRK14245 96 FP-KSIFENVAYGLRVNGVKDN----------AF-----------------------IRQRVEETLKGAALWDEVKDKLK 141 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH----------HH-----------------------HHHHHHHHHHHcCCCcchhhhhh
Confidence 76 6999999887543221100 00 01124567888888642 34
Q ss_pred ccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcC
Q 000517 333 TMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFD 412 (1449)
Q Consensus 333 t~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD 412 (1449)
+.++ .||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|+|++. |...++.+.+|
T Consensus 142 ~~~~-----~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivt-H~~~~~~~~~d 213 (250)
T PRK14245 142 ESAF-----ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKK--DYTIVIVT-HNMQQAARVSD 213 (250)
T ss_pred CCcc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEe-CCHHHHHhhCC
Confidence 4444 4999999999999999999999999999999999999999999999842 56766654 55667889999
Q ss_pred eEEEEeCCeEEEecChhhHH
Q 000517 413 DIILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 413 ~v~lL~~G~iv~~G~~~~~~ 432 (1449)
++++|++|++++.|+++++.
T Consensus 214 ~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 214 KTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred EEEEEECCEEEEECCHHHHh
Confidence 99999999999999998874
No 484
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-33 Score=318.71 Aligned_cols=208 Identities=24% Similarity=0.401 Sum_probs=169.8
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC---CCceEEEEcCCCccCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV---PPKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 260 (1449)
+++|+||||++.||+.+|++||||+||||+|++|-...+-+ +|.|++||++++... .|+.+|.||||..+|. -
T Consensus 551 k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFN-d 626 (790)
T KOG0056|consen 551 KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFN-D 626 (790)
T ss_pred CceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCcceeec-c
Confidence 57999999999999999999999999999999999999887 999999999986543 3678999999877765 5
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
|+..|+.|+. |++.-|+...|+.+.+ .. =+++++++..+|+||+...
T Consensus 627 TI~yNIryak-------------------------~~AsneevyaAAkAA~-----IH---drIl~fPegY~t~VGERGL 673 (790)
T KOG0056|consen 627 TILYNIRYAK-------------------------PSASNEEVYAAAKAAQ-----IH---DRILQFPEGYNTRVGERGL 673 (790)
T ss_pred eeeeheeecC-------------------------CCCChHHHHHHHHHhh-----HH---HHHhcCchhhhhhhhhccc
Confidence 9999998752 1111112112211111 11 2467899999999998433
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
| |||||||||+|||+++..|.+++|||.||+||..+.++|..+|.+++. ++|.|+..|.- .+.-.+|.|+++++|
T Consensus 674 k-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvAHRL--STivnAD~ILvi~~G 748 (790)
T KOG0056|consen 674 K-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVAHRL--STIVNADLILVISNG 748 (790)
T ss_pred c-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEeeee--hheecccEEEEEeCC
Confidence 3 899999999999999999999999999999999999999999999985 56666655543 455679999999999
Q ss_pred eEEEecChhhHHH
Q 000517 421 KIVYHGPQDHVLA 433 (1449)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1449)
+|++.|.++|++.
T Consensus 749 ~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 749 RIVERGRHEELLK 761 (790)
T ss_pred eEeecCcHHHHHh
Confidence 9999999999975
No 485
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1e-32 Score=312.22 Aligned_cols=206 Identities=25% Similarity=0.402 Sum_probs=160.3
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC---CCceEEEEcCCCccCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV---PPKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 260 (1449)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++ ..
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~-~~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLF-NR 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhc-cc
Confidence 35899999999999999999999999999999999999987 999999998765432 145699999998766 47
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHh--CCCcccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKIL--GLDVCADTMVGNA 338 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~l--gL~~~~dt~vg~~ 338 (1449)
||+||+.+... . ...+... ..... ...+..++.+ |++...+..+++
T Consensus 91 tv~~nl~~~~~--~--~~~~~~~---------------------~~~~~------~~~~~~l~~l~~~~~~~~~~~~~~- 138 (237)
T cd03252 91 SIRDNIALADP--G--MSMERVI---------------------EAAKL------AGAHDFISELPEGYDTIVGEQGAG- 138 (237)
T ss_pred hHHHHhhccCC--C--CCHHHHH---------------------HHHHH------cCcHHHHHhCcccccchhhcCCCc-
Confidence 99999987421 1 0000000 00000 1123345555 555444555544
Q ss_pred ccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEe
Q 000517 339 MRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMA 418 (1449)
Q Consensus 339 ~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~ 418 (1449)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++. .+.|+|++.|++ +++ ..+|++++|+
T Consensus 139 ----LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~~tiii~sH~~-~~~-~~~d~v~~l~ 210 (237)
T cd03252 139 ----LSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC--AGRTVIIIAHRL-STV-KNADRIIVME 210 (237)
T ss_pred ----CCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc--CCCEEEEEeCCH-HHH-HhCCEEEEEE
Confidence 99999999999999999999999999999999999999999999985 367877776655 455 5699999999
Q ss_pred CCeEEEecChhhHHH
Q 000517 419 EGKIVYHGPQDHVLA 433 (1449)
Q Consensus 419 ~G~iv~~G~~~~~~~ 433 (1449)
+|++++.|+.+++.+
T Consensus 211 ~G~i~~~~~~~~~~~ 225 (237)
T cd03252 211 KGRIVEQGSHDELLA 225 (237)
T ss_pred CCEEEEEcCHHHHHh
Confidence 999999999887653
No 486
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=315.95 Aligned_cols=205 Identities=22% Similarity=0.309 Sum_probs=161.1
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CeeeEEEECCccCCCC-----CCCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSL--KVTGEVSYNGYKLEEF-----VPPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1449)
.+|+|+|++|++|++++|+|||||||||||++|+|.+++.. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 27 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 106 (269)
T PRK14259 27 EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNPF 106 (269)
T ss_pred EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCccc
Confidence 48999999999999999999999999999999999987310 1289999999876421 1135699999998888
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC----ccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD----VCADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~dt 333 (1449)
+ .||+||+.+.+...+.. . + . +..++.+++.+++. +..|+
T Consensus 107 ~-~tv~enl~~~~~~~~~~-~-----~----~-------------------------~~~~~~~l~~~~l~~~l~~~~~~ 150 (269)
T PRK14259 107 P-KSIYENIAFGARINGYT-G-----D----M-------------------------DELVERSLRKAAVWDECKDKLNE 150 (269)
T ss_pred h-hhHHHHHhhhhhhcCCc-H-----H----H-------------------------HHHHHHHHHHhCCcchhhhhhCC
Confidence 7 59999999876432210 0 0 0 01123456666653 23455
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.+. .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ +.|+|++ +|...++.++||+
T Consensus 151 ~~~-----~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~~tiiiv-tH~~~~~~~~~d~ 222 (269)
T PRK14259 151 SGY-----SLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK--NFTIVIV-THNMQQAVRVSDM 222 (269)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEE-eCCHHHHHHhcCE
Confidence 544 4999999999999999999999999999999999999999999999853 5666655 5556788999999
Q ss_pred EEEEeC-----------CeEEEecChhhHHH
Q 000517 414 IILMAE-----------GKIVYHGPQDHVLA 433 (1449)
Q Consensus 414 v~lL~~-----------G~iv~~G~~~~~~~ 433 (1449)
+++|++ |++++.|+++++.+
T Consensus 223 i~~l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 223 TAFFNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred EEEEeccccccccccccceEEEeCCHHHHHh
Confidence 999996 67899999988753
No 487
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-32 Score=305.68 Aligned_cols=192 Identities=24% Similarity=0.416 Sum_probs=160.6
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCC-------CCceEEEEcCCCccCCCCC
Q 000517 189 HVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFV-------PPKTSAYISQNDLHIAEMT 261 (1449)
Q Consensus 189 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 261 (1449)
|+|+++++ |+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999987 999999998764211 1357999999998899999
Q ss_pred HHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccc
Q 000517 262 VRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRR 341 (1449)
Q Consensus 262 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~r 341 (1449)
++||+.+..... .. .. .+..++.+++.+||++..++.+++
T Consensus 92 ~~~~l~~~~~~~---~~--------~~-------------------------~~~~~~~~l~~~~l~~~~~~~~~~---- 131 (214)
T cd03297 92 VRENLAFGLKRK---RN--------RE-------------------------DRISVDELLDLLGLDHLLNRYPAQ---- 131 (214)
T ss_pred HHHHHHHHHhhC---CH--------HH-------------------------HHHHHHHHHHHcCCHhHhhcCccc----
Confidence 999998764211 00 00 011245678899998777777665
Q ss_pred cCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCCe
Q 000517 342 GISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEGK 421 (1449)
Q Consensus 342 GlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G~ 421 (1449)
||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++. |..+++.+++|++++|++|+
T Consensus 132 -LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~s-H~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 132 -LSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVT-HDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEe-cCHHHHHHhcCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999998764466766654 55677889999999999999
Q ss_pred EEEec
Q 000517 422 IVYHG 426 (1449)
Q Consensus 422 iv~~G 426 (1449)
++..|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98775
No 488
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=2.8e-32 Score=326.18 Aligned_cols=207 Identities=24% Similarity=0.360 Sum_probs=175.6
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCC--eeEEEEEEcCccCcc-------ccccceEEEEccCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSG--YVEGEIKISGYPKVQ-------ETFARVSGYCEQTDI 944 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~--~~~G~I~i~G~~~~~-------~~~~~~~gyv~Q~d~ 944 (1449)
..+++||||++.+||++||+|.|||||||+.++|.|..+.+ ..+|+|.++|.+... ..+.+.++|++|++.
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 57999999999999999999999999999999999976543 357999999986421 123467999999974
Q ss_pred --CCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEE
Q 000517 945 --HSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSII 1022 (1449)
Q Consensus 945 --~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~il 1022 (1449)
+.|.+|+.+-+.-...++... ..++..+++.++|+.+||.+-... ...+++||||||||+.||+||+.+|++|
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~--~~~ea~~~a~elL~~Vgl~~~~~~---~~yPheLSGG~rQRv~iAmALa~~P~LL 176 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKG--SRAEARKRAVELLEQVGLPDPERR---DRYPHQLSGGMRQRVMIAMALALKPKLL 176 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhccc--cHHHHHHHHHHHHHHcCCCChhhh---ccCCcccCchHHHHHHHHHHHhCCCCEE
Confidence 567789988887665555432 366777889999999999876554 2235689999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCCC
Q 000517 1023 FMDEPTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPLG 1087 (1449)
Q Consensus 1023 lLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~~ 1087 (1449)
++||||++||+.++.+|.++|+++.+ .|.++|+||||+.. +.+.+|++++|. +|++++.|+..
T Consensus 177 IaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~V-va~~aDrv~Vm~-~G~iVE~G~~~ 240 (539)
T COG1123 177 IADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGV-VAELADRVVVMY-KGEIVETGPTE 240 (539)
T ss_pred EECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHH-HHHhcCeEEEEE-CCEEEEecCHH
Confidence 99999999999999999999999974 59999999999974 788999999998 59999999974
No 489
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-32 Score=310.41 Aligned_cols=206 Identities=27% Similarity=0.380 Sum_probs=162.7
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCeeeEEEECCccCCCC-----CCCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDP--SLKVTGEVSYNGYKLEEF-----VPPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1449)
++|+|+|+++++||+++|+|||||||||||++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 589999999999999999999999999999999998763 112389999999987531 1245799999998877
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC----ccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD----VCADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~dt 333 (1449)
+ +||+||+.++....+.... .+ .+..++.+++.+++. +..++
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~---------~~------------------------~~~~~~~~l~~~~l~~~l~~~~~~ 142 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK---------KK------------------------LDEIVEKSLKGAALWDEVKDRLKK 142 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH---------HH------------------------HHHHHHHHHHHcCCchhhHHHHhc
Confidence 7 8999999987543321100 00 001234456666664 23345
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.+++ ||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++. |..+++.+.+|+
T Consensus 143 ~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~s-H~~~~~~~~~d~ 214 (250)
T PRK14240 143 SALG-----LSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK--DYTIVIVT-HNMQQASRISDK 214 (250)
T ss_pred CCCC-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEE-eCHHHHHhhCCE
Confidence 5544 999999999999999999999999999999999999999999999843 56766655 556688899999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
+++|++|+++..|+.+++.
T Consensus 215 v~~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 215 TAFFLNGEIVEFGDTVDLF 233 (250)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 490
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.2e-32 Score=298.35 Aligned_cols=160 Identities=24% Similarity=0.487 Sum_probs=141.8
Q ss_pred eeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc----ccccceEEEEccCC---CCCCC
Q 000517 876 LLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ----ETFARVSGYCEQTD---IHSPN 948 (1449)
Q Consensus 876 iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~----~~~~~~~gyv~Q~d---~~~~~ 948 (1449)
+|+++|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|+. .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPP--ASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 89999999999999999999999999999999998664 58999999987542 23456799999984 57788
Q ss_pred CCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000517 949 ITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1028 (1449)
Q Consensus 949 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPT 1028 (1449)
+|++||+.+... ||||||||++||++|+.+|++|+|||||
T Consensus 93 ~t~~e~l~~~~~----------------------------------------LS~G~~qrl~la~al~~~p~llllDEP~ 132 (182)
T cd03215 93 LSVAENIALSSL----------------------------------------LSGGNQQKVVLARWLARDPRVLILDEPT 132 (182)
T ss_pred CcHHHHHHHHhh----------------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCC
Confidence 999999876321 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcE
Q 000517 1029 TGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGR 1079 (1449)
Q Consensus 1029 sgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~ 1079 (1449)
+|||+.++..+.+.|+++.++|+|+|+++|+++ ++.+.+|++++|.+ |+
T Consensus 133 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v~~l~~-G~ 181 (182)
T cd03215 133 RGVDVGAKAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRILVMYE-GR 181 (182)
T ss_pred cCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEecC-Cc
Confidence 999999999999999999777899999999975 57788999999974 65
No 491
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=1.5e-32 Score=308.11 Aligned_cols=191 Identities=23% Similarity=0.283 Sum_probs=157.5
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcC--c--cCcc---c---c-ccceEEEEccC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISG--Y--PKVQ---E---T-FARVSGYCEQT 942 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G--~--~~~~---~---~-~~~~~gyv~Q~ 942 (1449)
..+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+|+|.++| . +... . . .++.+||++|+
T Consensus 21 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~ 98 (224)
T TIGR02324 21 LPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLP--DSGRILVRHEGAWVDLAQASPREVLEVRRKTIGYVSQF 98 (224)
T ss_pred eEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEEecCCCccchhhcCHHHHHHHHhcceEEEecc
Confidence 4699999999999999999999999999999999998654 479999984 2 3211 1 1 23568999999
Q ss_pred CCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCccc-ccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000517 943 DIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAI-KDSLVGIPGVNGLSTEQRKRLTIAVELVANPSI 1021 (1449)
Q Consensus 943 d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~i 1021 (1449)
+.+++.+||.|++.+..... ........+.+.++++.++|.+. .+..+ ..||||||||++||++|+.+|++
T Consensus 99 ~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LS~G~~qrl~laral~~~p~l 170 (224)
T TIGR02324 99 LRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLPP-----ATFSGGEQQRVNIARGFIADYPI 170 (224)
T ss_pred cccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCCc-----ccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999998764332 12233345677889999999763 35443 47999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEe
Q 000517 1022 IFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLK 1075 (1449)
Q Consensus 1022 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~ 1075 (1449)
|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+...+|+++.+.
T Consensus 171 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 171 LLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 9999999999999999999999999877999999999964 3556899988763
No 492
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.5e-32 Score=345.59 Aligned_cols=204 Identities=25% Similarity=0.286 Sum_probs=168.7
Q ss_pred cceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcC-----------------------ccC--
Q 000517 873 KLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISG-----------------------YPK-- 927 (1449)
Q Consensus 873 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G-----------------------~~~-- 927 (1449)
++.+|+|+|+++++||+++|+|||||||||||++|+|.....+.+|+|.++| .++
T Consensus 12 ~~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~ 91 (520)
T TIGR03269 12 GKEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTLEP 91 (520)
T ss_pred CeEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccccccccccccccccc
Confidence 3469999999999999999999999999999999999742012589999972 111
Q ss_pred --------cc---ccccceEEEEccC-CCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccC
Q 000517 928 --------VQ---ETFARVSGYCEQT-DIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGI 995 (1449)
Q Consensus 928 --------~~---~~~~~~~gyv~Q~-d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~ 995 (1449)
.. ...++.+||++|+ +.+++.+||+|++.+...... ...++.++++.++++.+||.+..+..++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~~- 167 (520)
T TIGR03269 92 EEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIG---YEGKEAVGRAVDLIEMVQLSHRITHIAR- 167 (520)
T ss_pred cchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhcCcc-
Confidence 00 1235679999997 677888999999988654321 2234445678999999999887777654
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-cCCEEEEEecCccHHHHHhcCeEEEE
Q 000517 996 PGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAIVMRAVKNIVN-TGRTIVCTIHQPSIDIFEAFDELILL 1074 (1449)
Q Consensus 996 ~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~~~H~p~~~~~~~~d~~~~l 1074 (1449)
.|||||||||+||+||+.+|++|||||||+|||+.++..+++.|+++++ .|+|||+++|++. .+.+.+|++++|
T Consensus 168 ----~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~-~~~~~~d~i~~l 242 (520)
T TIGR03269 168 ----DLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPE-VIEDLSDKAIWL 242 (520)
T ss_pred ----cCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEE
Confidence 7999999999999999999999999999999999999999999999965 4899999999986 466789999999
Q ss_pred ecCcEEEEecCC
Q 000517 1075 KTGGRIIYCGPL 1086 (1449)
Q Consensus 1075 ~~gG~~v~~G~~ 1086 (1449)
. +|++++.|+.
T Consensus 243 ~-~G~i~~~g~~ 253 (520)
T TIGR03269 243 E-NGEIKEEGTP 253 (520)
T ss_pred e-CCEEeeecCH
Confidence 7 5899998875
No 493
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-32 Score=311.85 Aligned_cols=203 Identities=21% Similarity=0.321 Sum_probs=161.0
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCCCeeeEEEECCccCCCCC-----CCceEEEEcCCC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLD-----PSLKVTGEVSYNGYKLEEFV-----PPKTSAYISQND 254 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~-----~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d 254 (1449)
.+|+|+|+.+++|++++|+|||||||||||++|+|..+ |+ +|+|.++|+++.... .++.++|++|++
T Consensus 35 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 111 (268)
T PRK14248 35 RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQKP 111 (268)
T ss_pred eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecCC
Confidence 58999999999999999999999999999999999864 45 899999998875321 245799999998
Q ss_pred ccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC----cc
Q 000517 255 LHIAEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD----VC 330 (1449)
Q Consensus 255 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~----~~ 330 (1449)
.+++. ||+||+.+.....+.... .. .+..++.+++.+|+. +.
T Consensus 112 ~~~~~-tv~enl~~~~~~~~~~~~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~ 157 (268)
T PRK14248 112 NPFPK-SIYNNITHALKYAGERRK---------SV------------------------LDEIVEESLTKAALWDEVKDR 157 (268)
T ss_pred ccCcc-cHHHHHHHHHHhcCCCcH---------HH------------------------HHHHHHHHHHHcCCCcchHHH
Confidence 88874 999999886432211000 00 001134456667764 22
Q ss_pred ccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhh
Q 000517 331 ADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDL 410 (1449)
Q Consensus 331 ~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~ 410 (1449)
.++.+++ ||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|+|++. |..+++.++
T Consensus 158 ~~~~~~~-----LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiii~t-H~~~~~~~~ 229 (268)
T PRK14248 158 LHSSALS-----LSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--EYSIIIVT-HNMQQALRV 229 (268)
T ss_pred HhcCccc-----CCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--CCEEEEEE-eCHHHHHHh
Confidence 3455544 999999999999999999999999999999999999999999999854 46666655 456678899
Q ss_pred cCeEEEEeCCeEEEecChhhHH
Q 000517 411 FDDIILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 411 fD~v~lL~~G~iv~~G~~~~~~ 432 (1449)
+|+|++|++|++++.|+.+++.
T Consensus 230 ~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 230 SDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred CCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999988764
No 494
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=7e-33 Score=377.95 Aligned_cols=213 Identities=23% Similarity=0.379 Sum_probs=172.2
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---------------------------------------
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPS--------------------------------------- 224 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~--------------------------------------- 224 (1449)
.+||+|+|++|+||+.+||+||||||||||+++|.|+++|.
T Consensus 1181 ~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 (1466)
T PTZ00265 1181 VPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSL 1260 (1466)
T ss_pred CccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999999982
Q ss_pred ------------CCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCCCHHHHHHHHHHccCCCCchhhhhHhcHHH
Q 000517 225 ------------LKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEMTVRETVDFSARCQGVGSREETMMEVSRRE 289 (1449)
Q Consensus 225 ------------~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e 289 (1449)
...+|+|++||+++++... ++.++||+|++.+| +.|+||||.++..
T Consensus 1261 ~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIreNI~~g~~------------------ 1321 (1466)
T PTZ00265 1261 TKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIYENIKFGKE------------------ 1321 (1466)
T ss_pred ccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHHHHHhcCCC------------------
Confidence 0138999999999987653 67899999998776 5899999998621
Q ss_pred HhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCccccccccccccccCChhhhhhHHHHHHHhCCCcEEEEeCC
Q 000517 290 KEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEI 369 (1449)
Q Consensus 290 ~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEP 369 (1449)
+.+.++..+++...+.. + .+ -.|++..||.||+. ...||||||||++|||||+++|+||+||||
T Consensus 1322 -------~at~eeI~~A~k~A~l~-----~-fI--~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLLDEa 1385 (1466)
T PTZ00265 1322 -------DATREDVKRACKFAAID-----E-FI--ESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLLDEA 1385 (1466)
T ss_pred -------CCCHHHHHHHHHHcCCH-----H-HH--HhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 11122223333322221 1 22 24899999999964 345999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeC----CeEE-EecChhhHHH
Q 000517 370 TNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAE----GKIV-YHGPQDHVLA 433 (1449)
Q Consensus 370 tsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~----G~iv-~~G~~~~~~~ 433 (1449)
||+||+.+...|.+.|+++....++|+|+..|+. ++.+.||+|++|++ |+++ .+|+++++++
T Consensus 1386 TSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRl--sti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1386 TSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRI--ASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred ccccCHHHHHHHHHHHHHHhccCCCEEEEEechH--HHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 9999999999999999987533468888876654 56788999999999 9955 8999999863
No 495
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=8.5e-33 Score=304.33 Aligned_cols=182 Identities=23% Similarity=0.318 Sum_probs=154.9
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc--ccccceEEEEccCCCCCCCCCH
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ--ETFARVSGYCEQTDIHSPNITV 951 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 951 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|+..+++..||
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~v~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 91 (200)
T PRK13540 14 QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNP--EKGEILFERQSIKKDLCTYQKQLCFVGHRSGINPYLTL 91 (200)
T ss_pred eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeeEEECCCccccCHHHHHhheEEeccccccCcCCCH
Confidence 4699999999999999999999999999999999998765 58999999987532 3456789999999888889999
Q ss_pred HHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000517 952 EESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTTGL 1031 (1449)
Q Consensus 952 ~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPTsgL 1031 (1449)
+||+.+.... . .. ...++++++.+++.+..+..++ .||||||||++|||+|+.+|++|+|||||+||
T Consensus 92 ~~~~~~~~~~--~----~~--~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~~~rv~laral~~~p~~lilDEP~~~L 158 (200)
T PRK13540 92 RENCLYDIHF--S----PG--AVGITELCRLFSLEHLIDYPCG-----LLSSGQKRQVALLRLWMSKAKLWLLDEPLVAL 158 (200)
T ss_pred HHHHHHHHhc--C----cc--hHHHHHHHHHcCCchhhhCChh-----hcCHHHHHHHHHHHHHhcCCCEEEEeCCCccc
Confidence 9999876421 1 11 2357889999999876666644 69999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEE
Q 000517 1032 DARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELI 1072 (1449)
Q Consensus 1032 D~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~ 1072 (1449)
|+.++..+.+.|+++++.|+|||+++|++. ....+|...
T Consensus 159 D~~~~~~l~~~l~~~~~~~~tiii~sh~~~--~~~~~d~~~ 197 (200)
T PRK13540 159 DELSLLTIITKIQEHRAKGGAVLLTSHQDL--PLNKADYEE 197 (200)
T ss_pred CHHHHHHHHHHHHHHHHcCCEEEEEeCCch--hccccchhh
Confidence 999999999999998777999999999975 345566543
No 496
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-32 Score=309.68 Aligned_cols=206 Identities=23% Similarity=0.377 Sum_probs=163.2
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCeeeEEEECCccCCCC-----CCCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDP--SLKVTGEVSYNGYKLEEF-----VPPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1449)
++|+|+|+++++||+++|+|||||||||||++|+|.++| ....+|+|.++|.++... ..++.++|++|++.++
T Consensus 17 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14262 17 KAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTPF 96 (250)
T ss_pred eeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCccC
Confidence 589999999999999999999999999999999999874 111389999999877531 1245799999998877
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCc----cccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDV----CADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~dt 333 (1449)
+ +||+||+.++....+.... .+ .+..++.+++.+|+.. ..+.
T Consensus 97 ~-~tv~e~l~~~~~~~~~~~~---------~~------------------------~~~~~~~~l~~~~l~~~~~~~~~~ 142 (250)
T PRK14262 97 P-MSIYDNVAFGPRIHGVKSK---------HK------------------------LDRIVEESLKKAALWDEVKSELNK 142 (250)
T ss_pred c-ccHHHHHHHHHHHcCCCcH---------HH------------------------HHHHHHHHHHHcCCCchhHHHHhC
Confidence 7 8999999986543211100 00 0012345677777753 2344
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.++ .||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.+ ++|++++. |..+++.+++|+
T Consensus 143 ~~~-----~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tili~s-H~~~~~~~~~d~ 214 (250)
T PRK14262 143 PGT-----RLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--NYTIVIVT-HNIGQAIRIADY 214 (250)
T ss_pred Chh-----hcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--CcEEEEEe-CCHHHHHHhCCE
Confidence 443 4999999999999999999999999999999999999999999999853 56666655 455678899999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
+++|++|+++..|+.+++.
T Consensus 215 i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 215 IAFMYRGELIEYGPTREIV 233 (250)
T ss_pred EEEEECCEEEEecCHHHHH
Confidence 9999999999999988774
No 497
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-33 Score=298.83 Aligned_cols=158 Identities=30% Similarity=0.453 Sum_probs=141.6
Q ss_pred ceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCcc-----ccccceEEEEccCCCCCCC
Q 000517 874 LRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKVQ-----ETFARVSGYCEQTDIHSPN 948 (1449)
Q Consensus 874 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~~-----~~~~~~~gyv~Q~d~~~~~ 948 (1449)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++.
T Consensus 13 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (178)
T cd03229 13 KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEP--DSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALFPH 90 (178)
T ss_pred eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccchhHHHHhhcEEEEecCCccCCC
Confidence 4699999999999999999999999999999999997654 58999999986532 2456789999999988888
Q ss_pred CCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000517 949 ITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPT 1028 (1449)
Q Consensus 949 lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~illLDEPT 1028 (1449)
.|++|++.+. ||||||||++||++|+.+|++++|||||
T Consensus 91 ~t~~~~l~~~------------------------------------------lS~G~~qr~~la~al~~~p~llilDEP~ 128 (178)
T cd03229 91 LTVLENIALG------------------------------------------LSGGQQQRVALARALAMDPDVLLLDEPT 128 (178)
T ss_pred CCHHHheeec------------------------------------------CCHHHHHHHHHHHHHHCCCCEEEEeCCc
Confidence 9999987531 8999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhc-CCEEEEEecCccHHHHHhcCeEEEEec
Q 000517 1029 TGLDARAAAIVMRAVKNIVNT-GRTIVCTIHQPSIDIFEAFDELILLKT 1076 (1449)
Q Consensus 1029 sgLD~~~~~~i~~~l~~l~~~-g~tvi~~~H~p~~~~~~~~d~~~~l~~ 1076 (1449)
+|||+.++..+.+.|++++++ |+|+|+++|++. ++.+.+|++++|++
T Consensus 129 ~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~ 176 (178)
T cd03229 129 SALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRD 176 (178)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC
Confidence 999999999999999999877 899999999975 46668999999975
No 498
>COG4161 ArtP ABC-type arginine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.6e-33 Score=273.35 Aligned_cols=205 Identities=26% Similarity=0.378 Sum_probs=175.1
Q ss_pred cccceeeccceeEEeCCeEEEEecCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCc-------c--ccccceEEEEcc
Q 000517 871 DRKLRLLYDVTGSLRPGVLTALMGVSGAGKTTLMDVLAGRKTSGYVEGEIKISGYPKV-------Q--ETFARVSGYCEQ 941 (1449)
Q Consensus 871 ~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~I~i~G~~~~-------~--~~~~~~~gyv~Q 941 (1449)
|+..++|.||+++.+.||.+.++||||||||||+++|.-...+ .+|+..|.|...+ + ..+|+.+|.|+|
T Consensus 12 yg~~q~lfdi~l~~~~getlvllgpsgagkssllr~lnlle~p--~sg~l~ia~~~fd~s~~~~~k~i~~lr~~vgmvfq 89 (242)
T COG4161 12 YGAHQALFDITLDCPEGETLVLLGPSGAGKSSLLRVLNLLEMP--RSGTLNIAGNHFDFSKTPSDKAIRDLRRNVGMVFQ 89 (242)
T ss_pred cccchheeeeeecCCCCCEEEEECCCCCchHHHHHHHHHHhCC--CCCeEEecccccccccCccHHHHHHHHHhhhhhhh
Confidence 4556799999999999999999999999999999999765444 4799888875311 1 346788999999
Q ss_pred CCCCCCCCCHHHHHHHHHHhccCCCCChHHHHHHHHHHHHHcCCcccccccccCCCCCCCCHHHHHHHHHHHHHhhCCCE
Q 000517 942 TDIHSPNITVEESVIFSAWLRLAPEINSKTKAEFVNEVLETIELDAIKDSLVGIPGVNGLSTEQRKRLTIAVELVANPSI 1021 (1449)
Q Consensus 942 ~d~~~~~lTv~e~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~Ia~aL~~~p~i 1021 (1449)
+..++|.+||.|||.-+. +|. ...++++.+.+..++++.+.|.+.+|+.. -.|||||+|||+|||||+.+|++
T Consensus 90 qy~lwphltv~enlieap-~kv-~gl~~~qa~~~a~ellkrlrl~~~adr~p-----lhlsggqqqrvaiaralmmkpqv 162 (242)
T COG4161 90 QYNLWPHLTVQENLIEAP-CRV-LGLSKDQALARAEKLLKRLRLKPYADRYP-----LHLSGGQQQRVAIARALMMEPQV 162 (242)
T ss_pred hhccCchhHHHHHHHhhh-HHH-hCCCHHHHHHHHHHHHHHhccccccccCc-----eecccchhhhHHHHHHHhcCCcE
Confidence 999999999999997542 222 23566777788999999999999999863 37999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEecCccHHHHHhcCeEEEEecCcEEEEecCC
Q 000517 1022 IFMDEPTTGLDARAAAIVMRAVKNIVNTGRTIVCTIHQPSIDIFEAFDELILLKTGGRIIYCGPL 1086 (1449)
Q Consensus 1022 llLDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~~~H~p~~~~~~~~d~~~~l~~gG~~v~~G~~ 1086 (1449)
|++||||+.||++-..++.+.|++++..|.|-++++|.... .-+.+.+++.|. +|+|++.|+.
T Consensus 163 llfdeptaaldpeitaqvv~iikel~~tgitqvivthev~v-a~k~as~vvyme-~g~ive~g~a 225 (242)
T COG4161 163 LLFDEPTAALDPEITAQIVSIIKELAETGITQVIVTHEVEV-ARKTASRVVYME-NGHIVEQGDA 225 (242)
T ss_pred EeecCcccccCHHHHHHHHHHHHHHHhcCceEEEEEeehhH-HHhhhhheEeee-cCeeEeecch
Confidence 99999999999999999999999999999999999997643 345678899987 6999999985
No 499
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.1e-32 Score=351.62 Aligned_cols=209 Identities=24% Similarity=0.437 Sum_probs=171.5
Q ss_pred cccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCeeeEEEECCccCCCCCC---CceEEEEcCCCccCCCC
Q 000517 184 INILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSLKVTGEVSYNGYKLEEFVP---PKTSAYISQNDLHIAEM 260 (1449)
Q Consensus 184 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 260 (1449)
.++|+|+|+.+++|+.++|+|+||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+| +.
T Consensus 345 ~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf-~~ 420 (571)
T TIGR02203 345 RPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPD---SGQILLDGHDLADYTLASLRRQVALVSQDVVLF-ND 420 (571)
T ss_pred CccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCeEEECCEeHHhcCHHHHHhhceEEccCcccc-cc
Confidence 35899999999999999999999999999999999999998 9999999998876543 46799999988655 56
Q ss_pred CHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCCcccccccccccc
Q 000517 261 TVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLDVCADTMVGNAMR 340 (1449)
Q Consensus 261 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 340 (1449)
|++|||.++.. ++.+.++..+++...+.. +.++ .|++..||.+|+. .
T Consensus 421 Ti~~Ni~~~~~------------------------~~~~~~~i~~~l~~~~l~------~~i~--~lp~gldt~i~~~-g 467 (571)
T TIGR02203 421 TIANNIAYGRT------------------------EQADRAEIERALAAAYAQ------DFVD--KLPLGLDTPIGEN-G 467 (571)
T ss_pred cHHHHHhcCCC------------------------CCCCHHHHHHHHHHcChH------HHHH--hCcCcccceecCC-C
Confidence 99999986420 011223333333333322 2222 3677789999975 4
Q ss_pred ccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCeEEEEeCC
Q 000517 341 RGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDDIILMAEG 420 (1449)
Q Consensus 341 rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~v~lL~~G 420 (1449)
+.||||||||++|||+++.+|++++||||||+||+.++..|.+.|++.. .++|+|+..|++ +..+.||+|++|++|
T Consensus 468 ~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~--~~~tiIiitH~~--~~~~~~D~ii~l~~g 543 (571)
T TIGR02203 468 VLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM--QGRTTLVIAHRL--STIEKADRIVVMDDG 543 (571)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh--CCCEEEEEehhh--HHHHhCCEEEEEeCC
Confidence 5699999999999999999999999999999999999999999999874 468888877765 567899999999999
Q ss_pred eEEEecChhhHHH
Q 000517 421 KIVYHGPQDHVLA 433 (1449)
Q Consensus 421 ~iv~~G~~~~~~~ 433 (1449)
+++..|+++++.+
T Consensus 544 ~i~~~g~~~~l~~ 556 (571)
T TIGR02203 544 RIVERGTHNELLA 556 (571)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999998863
No 500
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-32 Score=309.34 Aligned_cols=207 Identities=25% Similarity=0.366 Sum_probs=163.4
Q ss_pred ccccceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CeeeEEEECCccCCCC-----CCCceEEEEcCCCccC
Q 000517 185 NILNHVSGILKPGRMTLLLGPPGCGKSTFLKALSGNLDPSL--KVTGEVSYNGYKLEEF-----VPPKTSAYISQNDLHI 257 (1449)
Q Consensus 185 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~l~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 257 (1449)
++|+|+|+.|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (252)
T PRK14272 18 QAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNPF 97 (252)
T ss_pred EeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCccC
Confidence 58999999999999999999999999999999999987631 1379999999887531 1245799999999999
Q ss_pred CCCCHHHHHHHHHHccCCCCchhhhhHhcHHHHhcCCCCCCChHHHHHHHhhhhcchhhhHHHHHHHhCCC----ccccc
Q 000517 258 AEMTVRETVDFSARCQGVGSREETMMEVSRREKEAGIVPDPDIDTYMKAISVKGVKRTLQTDYILKILGLD----VCADT 333 (1449)
Q Consensus 258 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~i~p~~d~d~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~dt 333 (1449)
+.+|++||+.++....+.... + +. ....+..++.+++. +..++
T Consensus 98 ~~~t~~enl~~~~~~~~~~~~-~---~~-----------------------------~~~~~~~l~~~~l~~~l~~~~~~ 144 (252)
T PRK14272 98 PTMSVFDNVVAGLKLAGIRDR-D---HL-----------------------------MEVAERSLRGAALWDEVKDRLKT 144 (252)
T ss_pred cCCCHHHHHHHHHHhcCCCCH-H---HH-----------------------------HHHHHHHHHHcCcchhhhhhhcC
Confidence 999999999876543211000 0 00 00123344445442 33455
Q ss_pred cccccccccCChhhhhhHHHHHHHhCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCcEEEEEEecCchhHHhhcCe
Q 000517 334 MVGNAMRRGISGGQKKRLTTGEMIVGPTKALFMDEITNGLDSSTAYQIIACIQQLVHITDSTALISLLQPAPETFDLFDD 413 (1449)
Q Consensus 334 ~vg~~~~rGlSGGqrkRvsia~al~~~p~vllLDEPtsgLDs~~~~~i~~~L~~l~~~~~~t~vi~~~q~~~~~~~~fD~ 413 (1449)
.+++ ||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|+|++. |...++.+.+|+
T Consensus 145 ~~~~-----LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~s-H~~~~~~~~~d~ 216 (252)
T PRK14272 145 PATG-----LSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK--VTTIIIVT-HNMHQAARVSDT 216 (252)
T ss_pred Cccc-----CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEe-CCHHHHHHhCCE
Confidence 5554 999999999999999999999999999999999999999999999853 56666654 556688889999
Q ss_pred EEEEeCCeEEEecChhhHH
Q 000517 414 IILMAEGKIVYHGPQDHVL 432 (1449)
Q Consensus 414 v~lL~~G~iv~~G~~~~~~ 432 (1449)
|++|++|++++.|+++++.
T Consensus 217 i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 217 TSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988874
Done!