Query 000521
Match_columns 1446
No_of_seqs 701 out of 5677
Neff 7.8
Searched_HMMs 46136
Date Mon Apr 1 17:50:27 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000521.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000521hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 9E-257 2E-261 2436.6 140.4 1221 199-1439 123-1361(1381)
2 TIGR00957 MRP_assoc_pro multi 100.0 4E-207 8E-212 2103.4 167.1 1392 17-1439 23-1507(1522)
3 PLN03130 ABC transporter C fam 100.0 3E-207 7E-212 2097.4 163.3 1409 2-1439 7-1460(1622)
4 PLN03232 ABC transporter C fam 100.0 3E-203 6E-208 2062.3 163.0 1407 4-1439 9-1457(1495)
5 TIGR01271 CFTR_protein cystic 100.0 1E-192 2E-197 1954.2 145.2 1215 199-1439 4-1439(1490)
6 PTZ00243 ABC transporter; Prov 100.0 5E-182 1E-186 1847.9 147.2 1234 198-1439 59-1532(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 4E-143 8E-148 1348.5 106.5 1142 264-1439 14-1212(1228)
8 PTZ00265 multidrug resistance 100.0 3E-131 6E-136 1337.7 131.5 1149 265-1439 50-1451(1466)
9 KOG0058 Peptide exporter, ABC 100.0 1.7E-85 3.6E-90 786.6 55.3 545 882-1437 135-688 (716)
10 COG2274 SunT ABC-type bacterio 100.0 9.6E-78 2.1E-82 753.5 63.1 529 901-1439 160-695 (709)
11 COG1132 MdlB ABC-type multidru 100.0 2.5E-74 5.4E-79 731.4 64.1 528 902-1439 21-551 (567)
12 PRK11174 cysteine/glutathione 100.0 7.3E-74 1.6E-78 731.3 67.6 550 885-1439 13-571 (588)
13 TIGR00958 3a01208 Conjugate Tr 100.0 6.7E-74 1.4E-78 741.5 64.1 530 899-1439 165-701 (711)
14 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 8.2E-73 1.8E-77 732.3 67.9 527 902-1438 143-671 (686)
15 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.1E-72 2.5E-77 734.4 64.6 530 903-1439 162-699 (710)
16 TIGR01193 bacteriocin_ABC ABC- 100.0 3.7E-72 8E-77 728.7 64.1 546 882-1439 144-696 (708)
17 TIGR03375 type_I_sec_LssB type 100.0 7.8E-72 1.7E-76 724.1 66.4 531 902-1439 154-687 (694)
18 PRK10790 putative multidrug tr 100.0 1.7E-71 3.6E-76 709.6 67.2 530 900-1439 28-562 (592)
19 COG2274 SunT ABC-type bacterio 100.0 9.2E-71 2E-75 690.5 68.6 543 264-825 143-703 (709)
20 PRK11176 lipid transporter ATP 100.0 2.6E-71 5.7E-76 707.4 64.8 530 902-1438 32-565 (582)
21 KOG0058 Peptide exporter, ABC 100.0 4.6E-71 9.9E-76 662.3 59.7 540 268-825 140-699 (716)
22 COG4988 CydD ABC-type transpor 100.0 1.5E-70 3.3E-75 647.9 59.8 497 934-1439 39-542 (559)
23 TIGR02203 MsbA_lipidA lipid A 100.0 1.9E-70 4E-75 698.8 65.0 530 902-1438 21-554 (571)
24 KOG0055 Multidrug/pheromone ex 100.0 1.8E-72 4E-77 709.4 45.3 501 933-1440 69-576 (1228)
25 TIGR02868 CydC thiol reductant 100.0 1.4E-70 3.1E-75 692.3 61.9 503 902-1412 20-529 (529)
26 PRK11174 cysteine/glutathione 100.0 1.4E-69 3E-74 691.9 69.0 534 266-824 13-578 (588)
27 PRK11160 cysteine/glutathione 100.0 7.1E-70 1.5E-74 689.1 64.9 492 941-1439 66-561 (574)
28 TIGR01846 type_I_sec_HlyB type 100.0 2.4E-69 5.3E-74 700.1 66.9 528 904-1438 148-678 (694)
29 COG4987 CydC ABC-type transpor 100.0 1.1E-69 2.4E-74 628.0 55.9 487 944-1439 67-560 (573)
30 TIGR02204 MsbA_rel ABC transpo 100.0 1.4E-68 3.1E-73 681.8 65.2 533 902-1438 25-561 (576)
31 TIGR02857 CydD thiol reductant 100.0 1.3E-68 2.8E-73 674.5 63.5 515 902-1424 10-529 (529)
32 PRK13657 cyclic beta-1,2-gluca 100.0 5.2E-68 1.1E-72 676.4 67.8 530 900-1438 24-556 (588)
33 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.7E-67 3.7E-72 682.8 70.4 537 264-823 125-678 (686)
34 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.5E-67 5.5E-72 684.2 71.2 544 266-823 145-705 (710)
35 TIGR03375 type_I_sec_LssB type 100.0 7.6E-67 1.7E-71 677.5 72.5 535 265-819 137-689 (694)
36 KOG0056 Heavy metal exporter H 100.0 4E-70 8.7E-75 613.3 35.1 491 937-1438 255-759 (790)
37 TIGR00958 3a01208 Conjugate Tr 100.0 1.8E-66 3.8E-71 672.3 71.6 535 270-823 156-707 (711)
38 PRK10789 putative multidrug tr 100.0 2E-67 4.4E-72 666.7 61.2 496 936-1438 37-536 (569)
39 KOG0057 Mitochondrial Fe/S clu 100.0 1.8E-67 4E-72 609.5 54.3 491 935-1438 74-572 (591)
40 TIGR01192 chvA glucan exporter 100.0 2E-66 4.2E-71 658.5 67.0 528 901-1438 25-556 (585)
41 TIGR01193 bacteriocin_ABC ABC- 100.0 8E-66 1.7E-70 669.4 70.8 535 268-823 149-702 (708)
42 TIGR01842 type_I_sec_PrtD type 100.0 2.4E-65 5.2E-70 645.6 65.8 523 902-1438 13-540 (544)
43 PRK11176 lipid transporter ATP 100.0 7.8E-65 1.7E-69 647.8 69.5 538 268-824 18-573 (582)
44 TIGR02203 MsbA_lipidA lipid A 100.0 1.5E-64 3.3E-69 644.5 68.5 535 267-820 6-558 (571)
45 COG1123 ATPase components of v 100.0 1.1E-66 2.5E-71 619.0 44.4 463 601-1440 5-519 (539)
46 PRK10790 putative multidrug tr 100.0 1.1E-63 2.3E-68 637.7 69.3 532 268-825 16-570 (592)
47 TIGR02868 CydC thiol reductant 100.0 9.9E-64 2.1E-68 630.2 67.4 504 268-790 6-529 (529)
48 TIGR02204 MsbA_rel ABC transpo 100.0 1.5E-63 3.3E-68 635.6 69.4 541 265-821 8-566 (576)
49 TIGR01846 type_I_sec_HlyB type 100.0 4.9E-63 1.1E-67 641.3 70.2 541 265-824 129-686 (694)
50 PRK10261 glutathione transport 100.0 3.7E-65 8E-70 649.2 47.3 480 599-1439 10-552 (623)
51 PTZ00265 multidrug resistance 100.0 1.2E-63 2.6E-68 677.9 63.6 529 894-1427 59-655 (1466)
52 PRK11160 cysteine/glutathione 100.0 1.5E-62 3.2E-67 622.4 68.9 534 269-824 10-568 (574)
53 PRK13657 cyclic beta-1,2-gluca 100.0 1.7E-62 3.7E-67 625.7 69.7 532 269-824 13-564 (588)
54 TIGR01194 cyc_pep_trnsptr cycl 100.0 3.5E-63 7.6E-68 625.7 62.2 511 902-1432 25-551 (555)
55 TIGR01842 type_I_sec_PrtD type 100.0 1.6E-62 3.6E-67 619.8 68.2 520 272-818 3-542 (544)
56 COG5265 ATM1 ABC-type transpor 100.0 2.4E-65 5.2E-70 573.1 35.5 476 958-1439 5-485 (497)
57 TIGR00956 3a01205 Pleiotropic 100.0 1.2E-63 2.5E-68 678.1 59.4 247 1179-1435 717-988 (1394)
58 PRK10789 putative multidrug tr 100.0 1.7E-62 3.8E-67 621.7 65.5 522 284-824 4-544 (569)
59 PRK13549 xylose transporter AT 100.0 1.4E-64 3.1E-69 632.5 44.7 442 601-1438 5-492 (506)
60 PRK15134 microcin C ABC transp 100.0 2.3E-64 4.9E-69 634.1 44.1 451 601-1439 5-514 (529)
61 PRK09700 D-allose transporter 100.0 3.4E-64 7.4E-69 630.2 45.4 439 601-1435 5-493 (510)
62 COG1132 MdlB ABC-type multidru 100.0 8.4E-62 1.8E-66 616.8 67.6 527 273-825 13-559 (567)
63 TIGR03269 met_CoM_red_A2 methy 100.0 3.6E-64 7.7E-69 631.5 42.7 436 602-1439 1-516 (520)
64 COG4988 CydD ABC-type transpor 100.0 1.4E-61 3.1E-66 571.7 62.0 523 281-826 6-551 (559)
65 TIGR02857 CydD thiol reductant 100.0 1.7E-61 3.7E-66 609.9 67.0 507 274-802 2-529 (529)
66 PRK10762 D-ribose transporter 100.0 8.2E-64 1.8E-68 624.9 43.9 435 601-1438 4-482 (501)
67 COG4618 ArpD ABC-type protease 100.0 2.9E-62 6.2E-67 560.3 52.2 530 263-819 11-561 (580)
68 TIGR01192 chvA glucan exporter 100.0 1.4E-60 3.1E-65 604.9 70.9 533 269-825 13-565 (585)
69 TIGR02633 xylG D-xylose ABC tr 100.0 2.2E-63 4.8E-68 621.9 44.5 445 602-1436 2-488 (500)
70 PRK15439 autoinducer 2 ABC tra 100.0 5E-63 1.1E-67 618.1 44.1 447 600-1437 10-489 (510)
71 PRK15064 ABC transporter ATP-b 100.0 5.5E-62 1.2E-66 612.6 52.0 199 1217-1439 318-524 (530)
72 PRK11288 araG L-arabinose tran 100.0 1.1E-62 2.4E-67 614.7 44.3 437 601-1438 4-483 (501)
73 PLN03232 ABC transporter C fam 100.0 5.7E-61 1.2E-65 658.8 65.5 535 882-1439 289-827 (1495)
74 TIGR01257 rim_protein retinal- 100.0 2.5E-60 5.4E-65 639.8 69.7 217 1216-1438 1935-2157(2272)
75 PRK10522 multidrug transporter 100.0 1.5E-60 3.3E-65 601.7 61.8 462 949-1434 62-532 (547)
76 PLN03130 ABC transporter C fam 100.0 1.3E-60 2.8E-65 654.3 66.0 532 883-1438 290-826 (1622)
77 PRK10982 galactose/methyl gala 100.0 2.5E-62 5.5E-67 610.5 44.5 432 605-1436 2-476 (491)
78 PRK10938 putative molybdenum t 100.0 5E-62 1.1E-66 608.1 41.2 443 602-1434 4-486 (490)
79 PRK11819 putative ABC transpor 100.0 2E-60 4.4E-65 600.1 52.1 196 1217-1436 323-529 (556)
80 TIGR00957 MRP_assoc_pro multi 100.0 5.6E-59 1.2E-63 640.0 68.4 545 264-824 953-1514(1522)
81 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 3.9E-60 8.6E-65 597.5 52.3 470 601-1433 4-523 (552)
82 KOG0057 Mitochondrial Fe/S clu 100.0 1E-58 2.2E-63 536.9 55.0 511 287-820 42-576 (591)
83 COG4172 ABC-type uncharacteriz 100.0 2E-60 4.2E-65 528.8 38.5 451 600-1440 5-516 (534)
84 PRK10636 putative ABC transpor 100.0 7E-59 1.5E-63 591.7 52.3 198 1217-1438 311-515 (638)
85 PLN03140 ABC transporter G fam 100.0 2E-57 4.3E-62 613.7 62.4 210 1218-1435 867-1105(1470)
86 COG4987 CydC ABC-type transpor 100.0 1.1E-56 2.5E-61 519.9 58.7 538 266-825 8-568 (573)
87 KOG0054 Multidrug resistance-a 100.0 6E-57 1.3E-61 583.5 60.8 536 883-1439 190-730 (1381)
88 PTZ00243 ABC transporter; Prov 100.0 2.3E-56 5E-61 611.9 68.4 476 343-824 1026-1540(1560)
89 PRK11147 ABC transporter ATPas 100.0 1.3E-57 2.8E-62 582.0 51.8 198 1218-1441 319-526 (635)
90 TIGR01194 cyc_pep_trnsptr cycl 100.0 2E-55 4.4E-60 555.1 62.5 522 269-810 11-551 (555)
91 KOG0056 Heavy metal exporter H 100.0 1.7E-57 3.7E-62 511.6 36.9 519 282-824 222-768 (790)
92 PLN03073 ABC transporter F fam 100.0 4.2E-56 9E-61 566.4 51.9 202 1217-1442 507-716 (718)
93 COG4618 ArpD ABC-type protease 100.0 1.7E-55 3.7E-60 504.6 47.4 480 941-1440 69-560 (580)
94 TIGR00954 3a01203 Peroxysomal 100.0 8.9E-55 1.9E-59 556.0 55.2 513 896-1426 97-653 (659)
95 TIGR01271 CFTR_protein cystic 100.0 1E-53 2.2E-58 586.1 69.5 483 335-826 945-1448(1490)
96 COG0488 Uup ATPase components 100.0 6.4E-55 1.4E-59 531.4 45.5 480 601-1438 3-523 (530)
97 PRK13409 putative ATPase RIL; 100.0 1.4E-55 3.1E-60 552.8 39.0 192 1218-1435 340-537 (590)
98 PRK10522 multidrug transporter 100.0 7.2E-53 1.6E-57 532.0 63.0 508 265-810 3-530 (547)
99 COG1129 MglA ABC-type sugar tr 100.0 4E-53 8.7E-58 500.5 40.9 436 600-1431 7-481 (500)
100 TIGR00954 3a01203 Peroxysomal 100.0 3.4E-50 7.5E-55 513.9 60.3 516 276-804 97-653 (659)
101 COG5265 ATM1 ABC-type transpor 100.0 6.5E-51 1.4E-55 457.1 36.8 467 342-825 9-493 (497)
102 COG3845 ABC-type uncharacteriz 100.0 5.5E-50 1.2E-54 462.0 37.3 442 600-1437 3-489 (501)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.2E-50 4.8E-55 461.1 25.1 223 1217-1440 1-225 (275)
104 PRK14257 phosphate ABC transpo 100.0 1.9E-48 4.2E-53 456.5 25.7 226 1210-1440 72-313 (329)
105 COG1126 GlnQ ABC-type polar am 100.0 2.4E-45 5.3E-50 382.1 21.7 216 1218-1440 2-225 (240)
106 COG1135 AbcC ABC-type metal io 100.0 8.9E-45 1.9E-49 396.4 20.0 217 1219-1440 2-231 (339)
107 KOG0927 Predicted transporter 100.0 1.4E-43 3E-48 409.0 27.6 201 1218-1442 389-595 (614)
108 COG1117 PstB ABC-type phosphat 100.0 2.4E-44 5.2E-49 372.1 18.0 216 1217-1439 6-236 (253)
109 PRK14257 phosphate ABC transpo 100.0 1.9E-43 4E-48 414.4 23.6 262 524-818 23-313 (329)
110 cd03244 ABCC_MRP_domain2 Domai 100.0 2.1E-42 4.6E-47 386.8 26.4 219 1217-1435 1-221 (221)
111 cd03288 ABCC_SUR2 The SUR doma 100.0 3.1E-42 6.7E-47 393.7 26.8 225 1215-1439 16-242 (257)
112 cd03252 ABCC_Hemolysin The ABC 100.0 1.1E-41 2.3E-46 385.3 25.9 221 1219-1439 1-224 (237)
113 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.2E-41 2.7E-46 376.5 25.5 207 1213-1435 1-207 (207)
114 COG1126 GlnQ ABC-type polar am 100.0 3.7E-42 8E-47 358.3 18.7 201 601-819 2-226 (240)
115 COG1125 OpuBA ABC-type proline 100.0 7.4E-42 1.6E-46 361.9 19.3 214 1219-1439 2-224 (309)
116 PRK13631 cbiO cobalt transport 100.0 4.1E-41 9E-46 393.6 25.7 220 1215-1439 18-264 (320)
117 KOG0065 Pleiotropic drug resis 100.0 2.3E-40 5.1E-45 417.6 32.3 198 1231-1436 802-1017(1391)
118 cd03251 ABCC_MsbA MsbA is an e 100.0 1.3E-40 2.7E-45 375.9 25.2 221 1219-1439 1-224 (234)
119 cd03254 ABCC_Glucan_exporter_l 100.0 1.5E-40 3.3E-45 374.0 25.5 222 1217-1439 1-225 (229)
120 TIGR02314 ABC_MetN D-methionin 100.0 7.9E-41 1.7E-45 392.5 24.1 212 1219-1439 2-229 (343)
121 cd03245 ABCC_bacteriocin_expor 100.0 2.1E-40 4.5E-45 370.5 25.5 217 1217-1433 1-220 (220)
122 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 9.2E-41 2E-45 365.7 21.9 208 1218-1440 4-227 (254)
123 COG1120 FepC ABC-type cobalami 100.0 7E-41 1.5E-45 368.9 20.8 211 1218-1439 2-227 (258)
124 KOG0062 ATPase component of AB 100.0 2.2E-40 4.9E-45 380.6 22.6 192 1216-1432 360-560 (582)
125 cd03253 ABCC_ATM1_transporter 100.0 5.7E-40 1.2E-44 371.0 25.5 220 1219-1439 1-223 (236)
126 COG1124 DppF ABC-type dipeptid 100.0 2E-40 4.3E-45 353.2 20.1 215 1218-1440 3-231 (252)
127 COG1136 SalX ABC-type antimicr 100.0 4.4E-40 9.6E-45 355.6 22.6 204 1219-1431 2-222 (226)
128 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 6.3E-40 1.4E-44 371.1 24.7 221 1219-1439 1-225 (238)
129 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.8E-40 8.3E-45 376.9 22.9 219 601-826 2-233 (275)
130 cd03260 ABC_PstB_phosphate_tra 100.0 3.5E-40 7.5E-45 370.4 22.0 208 1219-1437 1-226 (227)
131 COG4178 ABC-type uncharacteriz 100.0 4.8E-37 1E-41 370.4 49.3 492 909-1426 57-588 (604)
132 cd03261 ABC_Org_Solvent_Resist 100.0 8.9E-40 1.9E-44 369.0 23.8 213 1219-1438 1-224 (235)
133 COG1122 CbiO ABC-type cobalt t 100.0 6.6E-40 1.4E-44 362.3 21.7 213 1218-1440 3-228 (235)
134 COG1135 AbcC ABC-type metal io 100.0 2.9E-40 6.2E-45 361.2 18.5 206 602-819 2-232 (339)
135 COG1116 TauB ABC-type nitrate/ 100.0 4.2E-40 9E-45 354.9 19.1 191 601-808 3-212 (248)
136 cd03248 ABCC_TAP TAP, the Tran 100.0 1.2E-39 2.7E-44 365.7 23.7 215 1215-1429 8-226 (226)
137 COG3839 MalK ABC-type sugar tr 100.0 1E-39 2.2E-44 373.0 23.2 214 1218-1440 3-223 (338)
138 PRK14269 phosphate ABC transpo 100.0 9.2E-40 2E-44 371.2 22.1 215 1218-1439 2-229 (246)
139 COG2884 FtsE Predicted ATPase 100.0 6.3E-40 1.4E-44 333.5 18.0 208 1219-1436 2-222 (223)
140 PRK13650 cbiO cobalt transport 100.0 2.1E-39 4.4E-44 374.3 24.6 213 1218-1439 4-228 (279)
141 PRK14250 phosphate ABC transpo 100.0 2E-39 4.3E-44 367.1 24.0 211 1218-1439 3-220 (241)
142 COG4615 PvdE ABC-type sideroph 100.0 7E-37 1.5E-41 339.6 43.3 473 937-1433 50-530 (546)
143 PRK13637 cbiO cobalt transport 100.0 2.1E-39 4.5E-44 375.5 24.4 216 1219-1439 3-233 (287)
144 PRK11153 metN DL-methionine tr 100.0 2.4E-39 5.3E-44 383.1 24.9 216 1219-1439 2-229 (343)
145 cd03263 ABC_subfamily_A The AB 100.0 1.5E-39 3.3E-44 363.6 21.9 213 1219-1437 1-218 (220)
146 PRK11629 lolD lipoprotein tran 100.0 5.2E-39 1.1E-43 362.1 25.8 212 1218-1434 5-228 (233)
147 PRK13646 cbiO cobalt transport 100.0 2.7E-39 5.9E-44 374.7 23.6 217 1218-1439 2-234 (286)
148 PRK10744 pstB phosphate transp 100.0 3.3E-39 7.1E-44 369.6 23.6 216 1216-1438 11-242 (260)
149 TIGR00960 3a0501s02 Type II (G 100.0 2.1E-39 4.6E-44 361.2 21.4 202 1219-1429 2-216 (216)
150 COG1125 OpuBA ABC-type proline 100.0 6.7E-40 1.5E-44 347.1 16.4 203 602-820 2-227 (309)
151 cd03219 ABC_Mj1267_LivG_branch 100.0 2.3E-39 5E-44 366.1 21.8 218 1219-1438 1-230 (236)
152 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.6E-39 3.5E-44 362.8 20.1 206 1219-1429 1-218 (218)
153 cd03224 ABC_TM1139_LivF_branch 100.0 2.6E-39 5.5E-44 362.3 21.6 213 1219-1438 1-219 (222)
154 cd03259 ABC_Carb_Solutes_like 100.0 2.1E-39 4.5E-44 360.5 20.5 206 1219-1433 1-213 (213)
155 COG1127 Ttg2A ABC-type transpo 100.0 4E-39 8.7E-44 340.9 21.2 218 1216-1440 6-235 (263)
156 cd03250 ABCC_MRP_domain1 Domai 100.0 5.4E-39 1.2E-43 354.6 23.1 197 1219-1428 1-204 (204)
157 PRK13643 cbiO cobalt transport 100.0 5.1E-39 1.1E-43 372.5 23.9 217 1219-1440 2-233 (288)
158 cd03296 ABC_CysA_sulfate_impor 100.0 5.8E-39 1.2E-43 363.2 23.8 212 1219-1439 3-225 (239)
159 cd03266 ABC_NatA_sodium_export 100.0 3.2E-39 6.8E-44 360.4 21.4 209 1219-1433 2-218 (218)
160 cd03256 ABC_PhnC_transporter A 100.0 3.7E-39 8E-44 365.7 22.2 213 1219-1438 1-232 (241)
161 COG3638 ABC-type phosphate/pho 100.0 3E-39 6.6E-44 340.9 19.8 211 1218-1438 3-235 (258)
162 TIGR02211 LolD_lipo_ex lipopro 100.0 4.2E-39 9.1E-44 360.2 22.2 207 1219-1430 2-220 (221)
163 cd03247 ABCC_cytochrome_bd The 100.0 4E-39 8.8E-44 347.5 21.2 178 1219-1433 1-178 (178)
164 PRK13647 cbiO cobalt transport 100.0 6.5E-39 1.4E-43 369.1 24.2 209 1218-1436 4-223 (274)
165 PRK14259 phosphate ABC transpo 100.0 7.9E-39 1.7E-43 367.7 24.3 220 1214-1440 9-253 (269)
166 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4E-39 8.7E-44 365.2 21.5 214 1219-1438 1-223 (242)
167 PRK13632 cbiO cobalt transport 100.0 9.5E-39 2.1E-43 367.6 24.8 216 1218-1438 7-229 (271)
168 TIGR02315 ABC_phnC phosphonate 100.0 7.1E-39 1.5E-43 363.8 23.1 213 1219-1438 2-233 (243)
169 PRK13635 cbiO cobalt transport 100.0 1E-38 2.2E-43 368.3 24.6 213 1218-1439 5-228 (279)
170 PRK14273 phosphate ABC transpo 100.0 6E-39 1.3E-43 366.5 22.5 215 1218-1439 7-237 (254)
171 COG1116 TauB ABC-type nitrate/ 100.0 7E-39 1.5E-43 345.4 21.6 196 1218-1429 3-211 (248)
172 PRK13636 cbiO cobalt transport 100.0 1.1E-38 2.4E-43 369.0 24.9 216 1218-1439 5-230 (283)
173 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 6E-39 1.3E-43 362.4 22.0 213 1219-1439 2-220 (236)
174 PRK14242 phosphate transporter 100.0 5.9E-39 1.3E-43 366.5 22.2 215 1218-1439 6-236 (253)
175 cd03258 ABC_MetN_methionine_tr 100.0 4.9E-39 1.1E-43 362.6 21.1 215 1219-1438 2-228 (233)
176 PRK11650 ugpC glycerol-3-phosp 100.0 8.1E-39 1.8E-43 378.8 23.9 214 1218-1439 3-223 (356)
177 TIGR00972 3a0107s01c2 phosphat 100.0 7.6E-39 1.6E-43 364.1 22.8 214 1219-1439 2-231 (247)
178 PRK11432 fbpC ferric transport 100.0 1E-38 2.3E-43 376.7 24.7 210 1217-1439 5-225 (351)
179 cd03264 ABC_drug_resistance_li 100.0 7.9E-39 1.7E-43 355.3 22.3 202 1219-1433 1-211 (211)
180 cd03225 ABC_cobalt_CbiO_domain 100.0 6.6E-39 1.4E-43 356.0 21.3 204 1220-1428 1-211 (211)
181 PRK13634 cbiO cobalt transport 100.0 1.1E-38 2.3E-43 370.2 23.5 216 1219-1439 3-234 (290)
182 COG1120 FepC ABC-type cobalami 100.0 7E-39 1.5E-43 353.0 20.4 201 601-818 2-228 (258)
183 TIGR03265 PhnT2 putative 2-ami 100.0 1.4E-38 3E-43 376.4 24.5 213 1218-1439 4-223 (353)
184 PRK13651 cobalt transporter AT 100.0 1.9E-38 4.1E-43 369.1 24.8 217 1218-1439 2-253 (305)
185 cd03257 ABC_NikE_OppD_transpor 100.0 1.1E-38 2.3E-43 358.9 22.0 211 1219-1433 2-228 (228)
186 cd03218 ABC_YhbG The ABC trans 100.0 9.4E-39 2E-43 360.1 21.2 214 1219-1439 1-221 (232)
187 PRK13537 nodulation ABC transp 100.0 1.2E-38 2.5E-43 371.7 22.7 215 1217-1439 6-226 (306)
188 PRK14267 phosphate ABC transpo 100.0 9E-39 2E-43 364.9 21.3 215 1218-1439 4-236 (253)
189 cd03226 ABC_cobalt_CbiO_domain 100.0 9.7E-39 2.1E-43 352.8 20.8 198 1220-1430 1-205 (205)
190 TIGR03411 urea_trans_UrtD urea 100.0 1.8E-38 3.8E-43 360.2 23.4 218 1219-1439 3-230 (242)
191 cd03268 ABC_BcrA_bacitracin_re 100.0 1.2E-38 2.6E-43 353.1 21.4 202 1219-1433 1-208 (208)
192 PRK14235 phosphate transporter 100.0 1.6E-38 3.4E-43 365.0 23.0 218 1215-1439 16-250 (267)
193 PRK10851 sulfate/thiosulfate t 100.0 2.9E-38 6.2E-43 373.7 25.7 213 1218-1439 2-225 (353)
194 PRK13642 cbiO cobalt transport 100.0 2.5E-38 5.4E-43 365.1 24.3 213 1218-1439 4-228 (277)
195 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.2E-38 2.6E-43 356.1 21.0 207 1219-1435 1-218 (220)
196 COG3840 ThiQ ABC-type thiamine 100.0 1.2E-38 2.5E-43 321.1 18.7 206 1219-1439 2-218 (231)
197 cd03291 ABCC_CFTR1 The CFTR su 100.0 5.8E-38 1.3E-42 360.2 27.1 207 1216-1439 37-246 (282)
198 PRK14247 phosphate ABC transpo 100.0 1.6E-38 3.4E-43 362.3 22.3 215 1218-1439 3-233 (250)
199 TIGR01186 proV glycine betaine 100.0 1E-38 2.2E-43 376.5 21.3 202 1233-1439 6-218 (363)
200 cd03301 ABC_MalK_N The N-termi 100.0 1.7E-38 3.6E-43 353.3 21.9 206 1219-1433 1-213 (213)
201 PRK13640 cbiO cobalt transport 100.0 2.7E-38 5.8E-43 365.6 24.1 218 1217-1439 4-231 (282)
202 PRK14237 phosphate transporter 100.0 2.3E-38 5E-43 363.6 23.4 216 1217-1439 19-250 (267)
203 cd03292 ABC_FtsE_transporter F 100.0 1.3E-38 2.8E-43 354.5 20.6 201 1219-1429 1-214 (214)
204 PRK13649 cbiO cobalt transport 100.0 2.4E-38 5.2E-43 366.5 23.4 215 1219-1438 3-232 (280)
205 cd03246 ABCC_Protease_Secretio 100.0 2.1E-38 4.6E-43 340.1 21.2 172 1219-1429 1-173 (173)
206 COG1117 PstB ABC-type phosphat 100.0 5E-39 1.1E-43 332.7 15.5 204 600-818 6-237 (253)
207 PRK14251 phosphate ABC transpo 100.0 1.5E-38 3.3E-43 362.6 21.0 215 1218-1439 4-234 (251)
208 PRK13648 cbiO cobalt transport 100.0 4E-38 8.7E-43 362.3 24.5 216 1218-1438 7-229 (269)
209 PRK09493 glnQ glutamine ABC tr 100.0 4.5E-38 9.7E-43 356.3 24.2 213 1219-1438 2-223 (240)
210 PRK14245 phosphate ABC transpo 100.0 1.9E-38 4.1E-43 361.5 21.3 215 1218-1439 3-233 (250)
211 PRK10619 histidine/lysine/argi 100.0 6.2E-38 1.3E-42 358.6 25.6 217 1216-1439 3-240 (257)
212 PRK13645 cbiO cobalt transport 100.0 2.8E-38 6.1E-43 367.2 23.1 218 1216-1438 4-238 (289)
213 PRK11264 putative amino-acid A 100.0 5.1E-38 1.1E-42 358.2 24.7 215 1218-1439 3-232 (250)
214 TIGR03258 PhnT 2-aminoethylpho 100.0 2.3E-38 5E-43 374.9 22.5 215 1216-1439 3-227 (362)
215 PRK14268 phosphate ABC transpo 100.0 2E-38 4.3E-43 362.7 21.3 215 1218-1439 12-241 (258)
216 PRK14248 phosphate ABC transpo 100.0 2.8E-38 6E-43 363.6 22.5 214 1218-1438 21-250 (268)
217 PRK14240 phosphate transporter 100.0 2.8E-38 6E-43 360.3 22.2 215 1217-1438 2-232 (250)
218 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3.6E-38 7.7E-43 345.4 22.1 200 600-818 3-227 (254)
219 TIGR03005 ectoine_ehuA ectoine 100.0 4.8E-38 1E-42 358.6 24.2 214 1219-1439 1-235 (252)
220 cd03250 ABCC_MRP_domain1 Domai 100.0 4.2E-38 9.2E-43 347.5 22.7 204 602-806 1-204 (204)
221 TIGR03410 urea_trans_UrtE urea 100.0 2.3E-38 4.9E-43 356.5 20.9 210 1219-1438 1-219 (230)
222 cd03265 ABC_DrrA DrrA is the A 100.0 2.8E-38 6.1E-43 353.1 21.4 207 1219-1437 1-218 (220)
223 PRK15079 oligopeptide ABC tran 100.0 2.3E-38 4.9E-43 371.8 21.6 217 1218-1439 8-250 (331)
224 PRK14239 phosphate transporter 100.0 2.5E-38 5.5E-43 361.1 21.5 215 1218-1439 5-235 (252)
225 PRK10895 lipopolysaccharide AB 100.0 3.9E-38 8.4E-43 357.1 22.8 215 1218-1439 3-225 (241)
226 PRK13644 cbiO cobalt transport 100.0 4.8E-38 1E-42 362.0 23.8 215 1219-1439 2-223 (274)
227 PRK14256 phosphate ABC transpo 100.0 3.9E-38 8.5E-43 359.3 22.8 217 1216-1439 2-235 (252)
228 cd03269 ABC_putative_ATPase Th 100.0 1.8E-38 4E-43 352.1 19.3 204 1219-1433 1-210 (210)
229 COG3839 MalK ABC-type sugar tr 100.0 2.3E-38 5E-43 362.0 20.6 203 601-820 3-225 (338)
230 PRK11000 maltose/maltodextrin 100.0 4.2E-38 9.2E-43 375.4 23.6 213 1218-1439 3-222 (369)
231 PRK10908 cell division protein 100.0 8.5E-38 1.9E-42 349.7 24.5 207 1219-1431 2-217 (222)
232 PRK11614 livF leucine/isoleuci 100.0 5.3E-38 1.2E-42 355.0 23.0 215 1218-1439 5-225 (237)
233 PRK14236 phosphate transporter 100.0 5.7E-38 1.2E-42 361.4 23.6 218 1215-1439 22-255 (272)
234 cd03290 ABCC_SUR1_N The SUR do 100.0 6.4E-38 1.4E-42 349.7 23.2 209 1219-1428 1-218 (218)
235 PRK14270 phosphate ABC transpo 100.0 4.8E-38 1E-42 358.4 22.6 215 1218-1439 4-234 (251)
236 PRK09452 potA putrescine/sperm 100.0 7E-38 1.5E-42 372.0 24.9 214 1217-1439 13-233 (375)
237 PRK13652 cbiO cobalt transport 100.0 6.7E-38 1.4E-42 361.6 24.0 212 1218-1439 3-226 (277)
238 PRK14274 phosphate ABC transpo 100.0 5.1E-38 1.1E-42 359.7 22.9 215 1218-1439 12-242 (259)
239 TIGR02673 FtsE cell division A 100.0 2.9E-38 6.3E-43 351.6 20.3 200 1219-1428 2-214 (214)
240 PRK14249 phosphate ABC transpo 100.0 5.8E-38 1.3E-42 357.7 23.2 216 1217-1439 3-234 (251)
241 PRK11247 ssuB aliphatic sulfon 100.0 8.6E-38 1.9E-42 355.4 24.5 202 1217-1434 11-217 (257)
242 cd03298 ABC_ThiQ_thiamine_tran 100.0 6.3E-38 1.4E-42 348.1 22.9 200 1219-1433 1-211 (211)
243 PRK10584 putative ABC transpor 100.0 6.3E-38 1.4E-42 352.4 23.1 206 1218-1432 6-227 (228)
244 PRK09536 btuD corrinoid ABC tr 100.0 6.1E-38 1.3E-42 374.2 24.3 210 1218-1438 3-226 (402)
245 PRK14238 phosphate transporter 100.0 7.7E-38 1.7E-42 359.9 24.1 217 1216-1439 22-254 (271)
246 PRK13641 cbiO cobalt transport 100.0 7.3E-38 1.6E-42 362.9 24.0 217 1218-1439 2-233 (287)
247 COG1136 SalX ABC-type antimicr 100.0 5.9E-38 1.3E-42 339.2 21.4 195 602-808 2-221 (226)
248 PRK11124 artP arginine transpo 100.0 9.6E-38 2.1E-42 354.1 24.3 213 1218-1437 2-227 (242)
249 COG3840 ThiQ ABC-type thiamine 100.0 2.3E-38 5E-43 318.9 16.9 199 602-819 2-220 (231)
250 PRK11831 putative ABC transpor 100.0 4E-38 8.7E-43 362.1 21.4 215 1218-1439 7-232 (269)
251 PRK14252 phosphate ABC transpo 100.0 5.7E-38 1.2E-42 360.4 22.5 220 1213-1439 11-248 (265)
252 PRK14244 phosphate ABC transpo 100.0 3.9E-38 8.4E-43 359.2 21.0 214 1219-1439 6-236 (251)
253 PRK11231 fecE iron-dicitrate t 100.0 6.2E-38 1.3E-42 358.2 22.5 210 1219-1439 3-226 (255)
254 cd03262 ABC_HisP_GlnQ_permease 100.0 7.3E-38 1.6E-42 348.2 22.5 204 1219-1429 1-213 (213)
255 PRK13633 cobalt transporter AT 100.0 8.9E-38 1.9E-42 361.1 24.0 213 1218-1439 4-232 (280)
256 PRK14260 phosphate ABC transpo 100.0 4.9E-38 1.1E-42 359.7 21.6 216 1217-1439 6-242 (259)
257 PRK11308 dppF dipeptide transp 100.0 1.3E-37 2.8E-42 365.2 25.7 217 1218-1439 5-243 (327)
258 TIGR01288 nodI ATP-binding ABC 100.0 6.4E-38 1.4E-42 366.2 22.9 214 1218-1439 4-223 (303)
259 TIGR03522 GldA_ABC_ATP gliding 100.0 6.9E-38 1.5E-42 365.3 22.9 213 1219-1439 3-220 (301)
260 PRK10575 iron-hydroxamate tran 100.0 6.7E-38 1.4E-42 359.7 22.4 210 1218-1438 11-235 (265)
261 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5.6E-38 1.2E-42 360.6 21.8 209 1220-1439 26-249 (269)
262 cd03291 ABCC_CFTR1 The CFTR su 100.0 2.1E-37 4.5E-42 355.6 26.4 212 598-818 36-247 (282)
263 PRK14261 phosphate ABC transpo 100.0 6.2E-38 1.4E-42 357.9 21.9 215 1218-1439 6-236 (253)
264 PRK14262 phosphate ABC transpo 100.0 5.2E-38 1.1E-42 358.0 21.2 215 1218-1439 3-233 (250)
265 cd03235 ABC_Metallic_Cations A 100.0 4E-38 8.6E-43 350.2 19.7 197 1220-1433 1-213 (213)
266 PRK14243 phosphate transporter 100.0 9.3E-38 2E-42 358.1 23.1 215 1218-1439 10-247 (264)
267 TIGR00968 3a0106s01 sulfate AB 100.0 9.6E-38 2.1E-42 352.5 22.9 212 1219-1439 1-219 (237)
268 COG1127 Ttg2A ABC-type transpo 100.0 8.4E-38 1.8E-42 330.9 20.8 204 599-820 6-237 (263)
269 COG3842 PotA ABC-type spermidi 100.0 4.1E-38 9E-43 361.8 19.8 211 1217-1440 4-226 (352)
270 PRK13639 cbiO cobalt transport 100.0 1.3E-37 2.8E-42 358.8 24.0 215 1219-1439 2-225 (275)
271 TIGR02769 nickel_nikE nickel i 100.0 1.2E-37 2.7E-42 357.4 23.6 217 1218-1439 2-239 (265)
272 PRK11022 dppD dipeptide transp 100.0 5.8E-38 1.3E-42 368.4 21.4 216 1218-1439 3-242 (326)
273 PRK14254 phosphate ABC transpo 100.0 1.2E-37 2.7E-42 360.1 23.6 215 1217-1438 38-267 (285)
274 PRK13638 cbiO cobalt transport 100.0 1.1E-37 2.4E-42 359.0 23.1 214 1219-1439 2-224 (271)
275 PRK14271 phosphate ABC transpo 100.0 3.1E-37 6.8E-42 355.3 26.8 215 1218-1439 21-250 (276)
276 PRK10253 iron-enterobactin tra 100.0 9.9E-38 2.1E-42 358.2 22.5 212 1217-1439 6-232 (265)
277 PRK13536 nodulation factor exp 100.0 1.1E-37 2.5E-42 366.8 23.1 214 1218-1439 41-260 (340)
278 PRK14266 phosphate ABC transpo 100.0 1E-37 2.2E-42 355.6 21.9 215 1218-1439 3-233 (250)
279 PRK11607 potG putrescine trans 100.0 1.9E-37 4.2E-42 368.9 25.1 214 1217-1439 18-238 (377)
280 PRK11300 livG leucine/isoleuci 100.0 1.5E-37 3.3E-42 355.4 23.2 218 1218-1439 5-242 (255)
281 PRK14253 phosphate ABC transpo 100.0 1.2E-37 2.6E-42 354.8 22.2 214 1218-1438 3-231 (249)
282 COG3842 PotA ABC-type spermidi 100.0 4.3E-38 9.3E-43 361.6 18.4 204 600-820 4-228 (352)
283 PRK13548 hmuV hemin importer A 100.0 2.5E-37 5.4E-42 353.3 24.6 211 1218-1439 2-229 (258)
284 PRK14264 phosphate ABC transpo 100.0 1.7E-37 3.6E-42 362.5 23.5 217 1216-1439 43-288 (305)
285 PRK14241 phosphate transporter 100.0 1.2E-37 2.5E-42 356.6 21.7 215 1218-1439 4-241 (258)
286 PRK09473 oppD oligopeptide tra 100.0 2.2E-37 4.7E-42 363.8 24.5 217 1218-1439 12-250 (330)
287 PRK14265 phosphate ABC transpo 100.0 1.9E-37 4.1E-42 357.0 23.1 216 1217-1439 19-257 (274)
288 COG1118 CysA ABC-type sulfate/ 100.0 6.1E-38 1.3E-42 341.8 17.7 201 602-820 3-229 (345)
289 TIGR03873 F420-0_ABC_ATP propo 100.0 2E-37 4.3E-42 354.2 22.8 210 1219-1439 2-225 (256)
290 PRK14255 phosphate ABC transpo 100.0 1.7E-37 3.7E-42 354.2 22.0 215 1218-1439 5-235 (252)
291 PRK10247 putative ABC transpor 100.0 1.7E-37 3.8E-42 347.6 21.6 207 1218-1435 7-222 (225)
292 PRK10070 glycine betaine trans 100.0 2.1E-37 4.6E-42 369.3 23.7 201 1234-1439 42-253 (400)
293 cd03252 ABCC_Hemolysin The ABC 100.0 3.3E-37 7.1E-42 348.6 24.0 212 602-819 1-226 (237)
294 cd03300 ABC_PotA_N PotA is an 100.0 1.8E-37 3.9E-42 349.3 21.5 212 1219-1439 1-219 (232)
295 PRK11701 phnK phosphonate C-P 100.0 3.9E-37 8.5E-42 352.2 24.5 215 1218-1439 6-240 (258)
296 PRK14263 phosphate ABC transpo 100.0 2.1E-37 4.7E-42 354.0 22.2 215 1218-1439 8-244 (261)
297 cd03234 ABCG_White The White s 100.0 1.6E-37 3.4E-42 348.5 20.5 212 1219-1433 4-226 (226)
298 PRK14258 phosphate ABC transpo 100.0 2.2E-37 4.9E-42 354.5 22.0 216 1217-1439 6-244 (261)
299 PRK14275 phosphate ABC transpo 100.0 2.1E-37 4.6E-42 358.6 21.8 217 1216-1439 37-269 (286)
300 COG1131 CcmA ABC-type multidru 100.0 1.7E-37 3.6E-42 358.4 20.6 213 1218-1441 4-227 (293)
301 TIGR01277 thiQ thiamine ABC tr 100.0 3.7E-37 8.1E-42 342.2 22.5 201 1219-1434 1-212 (213)
302 PRK14272 phosphate ABC transpo 100.0 2.6E-37 5.7E-42 352.8 21.8 215 1218-1439 4-235 (252)
303 PRK13547 hmuV hemin importer A 100.0 3.8E-37 8.2E-42 353.0 22.9 213 1219-1438 2-242 (272)
304 PRK10771 thiQ thiamine transpo 100.0 7.3E-37 1.6E-41 344.5 24.7 206 1219-1439 2-218 (232)
305 TIGR02982 heterocyst_DevA ABC 100.0 2.3E-37 5E-42 345.6 20.3 206 1219-1429 2-219 (220)
306 cd03254 ABCC_Glucan_exporter_l 100.0 7E-37 1.5E-41 344.2 24.2 211 601-818 2-226 (229)
307 PRK11248 tauB taurine transpor 100.0 4.2E-37 9.2E-42 350.3 22.5 205 1219-1435 2-215 (255)
308 TIGR01978 sufC FeS assembly AT 100.0 3.4E-37 7.4E-42 350.0 21.4 214 1219-1439 1-233 (243)
309 cd03288 ABCC_SUR2 The SUR doma 100.0 1.2E-36 2.6E-41 347.7 25.4 214 599-818 17-243 (257)
310 PRK15093 antimicrobial peptide 100.0 3.8E-37 8.2E-42 362.8 21.8 213 1218-1439 3-247 (330)
311 COG1124 DppF ABC-type dipeptid 100.0 4.7E-37 1E-41 327.5 20.1 207 601-819 3-232 (252)
312 TIGR01188 drrA daunorubicin re 100.0 3.5E-37 7.6E-42 359.8 20.9 204 1227-1438 2-211 (302)
313 PRK15112 antimicrobial peptide 100.0 9.7E-37 2.1E-41 350.2 24.1 213 1218-1439 4-238 (267)
314 TIGR03415 ABC_choXWV_ATP choli 100.0 3.7E-37 7.9E-42 364.6 21.1 201 1234-1439 38-253 (382)
315 cd03299 ABC_ModC_like Archeal 100.0 1.2E-36 2.5E-41 343.3 24.0 206 1219-1438 1-217 (235)
316 cd03228 ABCC_MRP_Like The MRP 100.0 7.5E-37 1.6E-41 327.5 21.0 171 1219-1428 1-171 (171)
317 cd03251 ABCC_MsbA MsbA is an e 100.0 1.3E-36 2.9E-41 343.1 24.1 211 603-819 2-226 (234)
318 PRK14246 phosphate ABC transpo 100.0 1.3E-36 2.8E-41 346.8 24.2 216 1217-1439 9-240 (257)
319 cd03244 ABCC_MRP_domain2 Domai 100.0 1.4E-36 3E-41 339.9 23.8 206 601-812 2-220 (221)
320 PRK10419 nikE nickel transport 100.0 7.4E-37 1.6E-41 351.2 21.8 221 1218-1440 3-241 (268)
321 COG3638 ABC-type phosphate/pho 100.0 3.5E-37 7.6E-42 325.3 16.9 202 600-817 2-236 (258)
322 cd03230 ABC_DR_subfamily_A Thi 100.0 1.2E-36 2.5E-41 326.6 20.7 170 1219-1429 1-173 (173)
323 COG1122 CbiO ABC-type cobalt t 100.0 7.2E-37 1.6E-41 338.1 19.6 203 601-819 3-229 (235)
324 PRK10418 nikD nickel transport 100.0 1.2E-36 2.7E-41 347.1 22.1 211 1218-1439 4-229 (254)
325 cd03253 ABCC_ATM1_transporter 100.0 2.5E-36 5.4E-41 341.4 24.1 209 603-818 2-224 (236)
326 PRK09984 phosphonate/organopho 100.0 1.3E-36 2.9E-41 348.6 22.2 214 1218-1438 4-240 (262)
327 cd03229 ABC_Class3 This class 100.0 1.5E-36 3.2E-41 327.4 21.0 172 1219-1428 1-178 (178)
328 COG4178 ABC-type uncharacteriz 100.0 2.1E-33 4.6E-38 338.9 50.7 452 333-804 104-588 (604)
329 cd03297 ABC_ModC_molybdenum_tr 100.0 1.5E-36 3.2E-41 337.8 21.4 204 1219-1433 2-214 (214)
330 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.7E-36 5.8E-41 341.4 23.8 211 603-818 2-226 (238)
331 COG1118 CysA ABC-type sulfate/ 100.0 5.8E-37 1.3E-41 334.1 17.4 210 1218-1440 2-227 (345)
332 PRK11144 modC molybdate transp 100.0 2.1E-36 4.7E-41 359.2 23.2 207 1219-1439 2-217 (352)
333 TIGR03740 galliderm_ABC gallid 100.0 2.6E-36 5.7E-41 338.0 22.5 203 1219-1436 1-209 (223)
334 TIGR01186 proV glycine betaine 100.0 9.2E-37 2E-41 359.9 19.1 188 621-819 7-220 (363)
335 TIGR02142 modC_ABC molybdenum 100.0 2.9E-36 6.3E-41 358.7 23.1 208 1223-1439 4-220 (354)
336 TIGR02323 CP_lyasePhnK phospho 100.0 2.5E-36 5.4E-41 344.8 21.7 215 1218-1439 3-237 (253)
337 PRK11650 ugpC glycerol-3-phosp 100.0 2.7E-36 5.8E-41 357.4 22.7 202 601-819 3-225 (356)
338 cd03233 ABC_PDR_domain1 The pl 100.0 2.7E-36 5.9E-41 331.9 21.1 190 1218-1433 3-202 (202)
339 cd03215 ABC_Carb_Monos_II This 100.0 1.9E-36 4.1E-41 327.8 19.3 172 1218-1429 4-182 (182)
340 cd03213 ABCG_EPDR ABCG transpo 100.0 2.3E-36 5E-41 330.3 20.0 182 1218-1433 3-194 (194)
341 cd03245 ABCC_bacteriocin_expor 100.0 7.1E-36 1.5E-40 333.9 23.9 205 601-811 2-220 (220)
342 PRK13631 cbiO cobalt transport 100.0 4.2E-36 9.1E-41 351.4 23.0 209 598-818 18-265 (320)
343 COG4555 NatA ABC-type Na+ tran 100.0 6.9E-37 1.5E-41 313.7 13.9 212 1219-1437 2-219 (245)
344 TIGR02314 ABC_MetN D-methionin 100.0 2.9E-36 6.3E-41 354.0 21.3 203 602-818 2-230 (343)
345 COG0410 LivF ABC-type branched 100.0 6E-36 1.3E-40 317.0 21.2 215 1218-1438 3-224 (237)
346 cd03232 ABC_PDR_domain2 The pl 100.0 2.5E-36 5.4E-41 329.6 19.0 181 1218-1433 3-192 (192)
347 cd03223 ABCD_peroxisomal_ALDP 100.0 4.7E-36 1E-40 319.3 20.5 164 1219-1428 1-164 (166)
348 cd03214 ABC_Iron-Siderophores_ 100.0 3E-36 6.5E-41 325.6 19.1 177 1220-1433 1-180 (180)
349 cd03217 ABC_FeS_Assembly ABC-t 100.0 6.2E-36 1.3E-40 328.6 21.9 183 1219-1436 1-190 (200)
350 TIGR03608 L_ocin_972_ABC putat 100.0 4.7E-36 1E-40 331.9 20.4 193 1221-1424 1-206 (206)
351 PRK11432 fbpC ferric transport 100.0 8.4E-36 1.8E-40 352.1 22.8 201 601-819 6-227 (351)
352 COG4619 ABC-type uncharacteriz 100.0 1.6E-36 3.5E-41 301.2 13.9 197 1227-1431 10-214 (223)
353 COG4615 PvdE ABC-type sideroph 100.0 3.1E-33 6.8E-38 310.7 41.4 507 266-810 4-529 (546)
354 PRK15056 manganese/iron transp 100.0 1.3E-35 2.8E-40 341.9 23.3 208 1218-1439 6-229 (272)
355 cd03290 ABCC_SUR1_N The SUR do 100.0 1.3E-35 2.8E-40 331.2 22.2 199 603-806 2-218 (218)
356 CHL00131 ycf16 sulfate ABC tra 100.0 1.5E-35 3.2E-40 338.3 22.9 215 1218-1436 7-237 (252)
357 COG2884 FtsE Predicted ATPase 100.0 5.2E-36 1.1E-40 305.0 16.9 193 602-811 2-219 (223)
358 cd03261 ABC_Org_Solvent_Resist 100.0 1.1E-35 2.4E-40 335.6 20.8 198 603-818 2-226 (235)
359 cd03267 ABC_NatA_like Similar 100.0 9.3E-36 2E-40 335.9 19.7 195 1233-1433 34-236 (236)
360 PRK09452 potA putrescine/sperm 100.0 1.8E-35 4E-40 351.3 23.0 202 600-819 13-235 (375)
361 COG0444 DppD ABC-type dipeptid 100.0 6.7E-36 1.5E-40 333.1 17.9 213 1219-1440 2-243 (316)
362 PRK09544 znuC high-affinity zi 100.0 2.3E-35 5.1E-40 334.8 22.6 199 1218-1439 4-208 (251)
363 PRK03695 vitamin B12-transport 100.0 2E-35 4.3E-40 335.7 21.8 208 1220-1439 2-221 (248)
364 PRK09580 sufC cysteine desulfu 100.0 2.1E-35 4.5E-40 336.4 21.8 213 1219-1436 2-231 (248)
365 TIGR01184 ntrCD nitrate transp 100.0 1E-35 2.2E-40 334.3 18.9 192 1236-1437 1-201 (230)
366 TIGR03265 PhnT2 putative 2-ami 100.0 1.6E-35 3.5E-40 350.4 21.6 201 601-819 4-225 (353)
367 PRK13643 cbiO cobalt transport 100.0 2E-35 4.3E-40 342.5 21.7 205 602-818 2-233 (288)
368 PRK13634 cbiO cobalt transport 100.0 2.2E-35 4.8E-40 342.4 22.1 205 602-818 3-235 (290)
369 PRK13637 cbiO cobalt transport 100.0 2.5E-35 5.4E-40 341.5 22.0 207 601-818 2-234 (287)
370 cd03216 ABC_Carb_Monos_I This 100.0 4.2E-35 9.1E-40 311.0 21.7 159 1219-1431 1-162 (163)
371 PRK10851 sulfate/thiosulfate t 100.0 3.6E-35 7.9E-40 347.4 22.9 201 601-819 2-227 (353)
372 PRK13646 cbiO cobalt transport 100.0 3.1E-35 6.8E-40 340.7 21.9 206 601-818 2-235 (286)
373 PRK13650 cbiO cobalt transport 100.0 2.8E-35 6.1E-40 339.9 21.3 204 601-819 4-230 (279)
374 cd03260 ABC_PstB_phosphate_tra 100.0 2.6E-35 5.6E-40 331.0 19.7 197 602-815 1-226 (227)
375 TIGR03258 PhnT 2-aminoethylpho 100.0 3E-35 6.5E-40 348.4 21.2 202 600-819 4-229 (362)
376 PRK13651 cobalt transporter AT 100.0 4.6E-35 9.9E-40 340.8 22.4 206 601-818 2-254 (305)
377 cd03296 ABC_CysA_sulfate_impor 100.0 5.3E-35 1.1E-39 330.9 22.3 199 601-817 2-225 (239)
378 cd03369 ABCC_NFT1 Domain 2 of 100.0 7.4E-35 1.6E-39 322.4 22.9 189 600-812 5-206 (207)
379 cd03248 ABCC_TAP TAP, the Tran 100.0 6E-35 1.3E-39 327.8 22.3 205 598-807 8-226 (226)
380 PRK11000 maltose/maltodextrin 100.0 3.8E-35 8.2E-40 350.0 21.9 200 601-818 3-223 (369)
381 PRK13549 xylose transporter AT 100.0 5.8E-35 1.2E-39 365.8 24.5 214 1218-1438 5-230 (506)
382 PRK13538 cytochrome c biogenes 100.0 3.6E-35 7.8E-40 323.9 19.9 194 1219-1424 2-202 (204)
383 PRK14269 phosphate ABC transpo 100.0 5.2E-35 1.1E-39 332.3 21.5 203 601-818 2-230 (246)
384 cd03231 ABC_CcmA_heme_exporter 100.0 7.3E-35 1.6E-39 320.6 21.9 194 1219-1424 1-198 (201)
385 PRK00349 uvrA excinuclease ABC 100.0 2.8E-34 6.1E-39 370.3 30.8 215 1218-1439 614-926 (943)
386 COG1137 YhbG ABC-type (unclass 100.0 4.5E-36 9.8E-41 307.3 11.1 221 1217-1439 3-227 (243)
387 PRK13647 cbiO cobalt transport 100.0 4.8E-35 1E-39 337.1 20.8 199 601-816 4-225 (274)
388 cd03259 ABC_Carb_Solutes_like 100.0 3.9E-35 8.4E-40 326.2 19.3 191 603-811 2-213 (213)
389 PRK14250 phosphate ABC transpo 100.0 1.1E-34 2.3E-39 328.5 23.0 201 601-818 3-221 (241)
390 PRK15439 autoinducer 2 ABC tra 100.0 1.3E-34 2.8E-39 362.3 26.0 214 1218-1439 11-228 (510)
391 cd03219 ABC_Mj1267_LivG_branch 100.0 4.6E-35 1E-39 331.0 19.7 198 603-818 2-232 (236)
392 PRK14242 phosphate transporter 100.0 8.3E-35 1.8E-39 332.3 21.7 204 600-818 5-237 (253)
393 cd03293 ABC_NrtD_SsuB_transpor 100.0 6E-35 1.3E-39 326.3 20.0 197 603-813 2-218 (220)
394 PRK11607 potG putrescine trans 100.0 9.4E-35 2E-39 346.0 22.7 204 599-819 17-240 (377)
395 PRK09700 D-allose transporter 100.0 1.1E-34 2.3E-39 363.9 24.3 214 1218-1438 5-232 (510)
396 TIGR02770 nickel_nikD nickel i 100.0 4.8E-35 1E-39 329.1 18.9 194 1235-1439 1-214 (230)
397 PRK10762 D-ribose transporter 100.0 1.2E-34 2.6E-39 362.5 24.5 214 1218-1438 4-228 (501)
398 cd03265 ABC_DrrA DrrA is the A 100.0 6.5E-35 1.4E-39 326.0 19.7 197 602-816 1-219 (220)
399 TIGR00972 3a0107s01c2 phosphat 100.0 9.5E-35 2.1E-39 330.5 21.3 202 602-818 2-232 (247)
400 PRK14273 phosphate ABC transpo 100.0 1.5E-34 3.2E-39 330.3 22.6 204 600-818 6-238 (254)
401 TIGR00960 3a0501s02 Type II (G 100.0 4.9E-35 1.1E-39 326.2 18.1 190 602-807 2-216 (216)
402 cd03226 ABC_cobalt_CbiO_domain 100.0 7E-35 1.5E-39 322.1 19.1 188 604-808 2-205 (205)
403 COG1123 ATPase components of v 100.0 1.4E-34 3E-39 345.1 22.8 214 1218-1440 5-244 (539)
404 PRK13540 cytochrome c biogenes 100.0 9.3E-35 2E-39 319.6 19.8 193 1219-1423 2-198 (200)
405 PRK11153 metN DL-methionine tr 100.0 1.2E-34 2.5E-39 343.2 22.0 204 602-819 2-231 (343)
406 TIGR02315 ABC_phnC phosphonate 100.0 1.2E-34 2.6E-39 329.1 21.1 198 602-816 2-233 (243)
407 PRK11288 araG L-arabinose tran 100.0 1.5E-34 3.2E-39 361.6 23.9 210 1218-1434 4-223 (501)
408 cd03294 ABC_Pro_Gly_Bertaine T 100.0 8.7E-35 1.9E-39 334.2 19.8 186 621-818 38-250 (269)
409 PRK13635 cbiO cobalt transport 100.0 2E-34 4.3E-39 332.6 22.8 202 601-818 5-229 (279)
410 PRK10744 pstB phosphate transp 100.0 2.3E-34 5E-39 329.6 22.8 205 599-818 11-244 (260)
411 PRK13644 cbiO cobalt transport 100.0 1.7E-34 3.7E-39 332.5 21.7 200 602-818 2-224 (274)
412 cd03256 ABC_PhnC_transporter A 100.0 1.5E-34 3.2E-39 328.0 20.9 197 603-816 2-232 (241)
413 cd03263 ABC_subfamily_A The AB 100.0 1.4E-34 3.1E-39 323.4 20.5 197 603-816 2-219 (220)
414 PRK13543 cytochrome c biogenes 100.0 2E-34 4.4E-39 320.2 21.5 195 1218-1426 11-212 (214)
415 cd03268 ABC_BcrA_bacitracin_re 100.0 1.7E-34 3.6E-39 319.9 20.8 191 603-811 2-208 (208)
416 PRK13537 nodulation ABC transp 100.0 1.8E-34 3.8E-39 336.6 21.9 202 600-819 6-228 (306)
417 KOG0060 Long-chain acyl-CoA tr 100.0 2.6E-32 5.6E-37 318.1 39.5 336 1078-1427 269-642 (659)
418 PRK11629 lolD lipoprotein tran 100.0 2E-34 4.2E-39 325.0 21.2 198 601-812 5-228 (233)
419 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.3E-34 4.9E-39 325.1 21.8 199 602-818 2-221 (236)
420 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.2E-34 2.5E-39 323.7 19.0 191 603-807 2-218 (218)
421 PRK11247 ssuB aliphatic sulfon 100.0 3.5E-34 7.6E-39 325.8 22.4 197 600-814 11-219 (257)
422 cd03224 ABC_TM1139_LivF_branch 100.0 2.1E-34 4.6E-39 322.5 20.3 198 603-817 2-220 (222)
423 PRK13641 cbiO cobalt transport 100.0 2.9E-34 6.4E-39 332.8 22.0 206 601-818 2-234 (287)
424 cd03301 ABC_MalK_N The N-termi 100.0 1.8E-34 3.9E-39 321.0 19.2 191 603-811 2-213 (213)
425 cd03258 ABC_MetN_methionine_tr 100.0 2.9E-34 6.3E-39 323.7 21.1 202 602-817 2-229 (233)
426 COG1245 Predicted ATPase, RNas 100.0 1.5E-33 3.2E-38 318.8 26.6 162 1242-1425 363-530 (591)
427 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.7E-34 5.8E-39 325.8 20.9 200 603-817 2-224 (242)
428 PRK10982 galactose/methyl gala 100.0 2.5E-34 5.5E-39 358.9 22.6 211 1221-1438 1-221 (491)
429 PRK14237 phosphate transporter 100.0 4E-34 8.8E-39 328.5 22.5 206 598-818 17-251 (267)
430 cd03235 ABC_Metallic_Cations A 100.0 1.9E-34 4.2E-39 320.6 19.2 188 604-810 2-212 (213)
431 cd03218 ABC_YhbG The ABC trans 100.0 2.5E-34 5.5E-39 324.1 20.2 197 603-817 2-221 (232)
432 PRK09536 btuD corrinoid ABC tr 100.0 2.9E-34 6.2E-39 342.7 21.7 200 601-818 3-228 (402)
433 TIGR01288 nodI ATP-binding ABC 100.0 3.3E-34 7.2E-39 334.9 21.9 202 600-819 3-225 (303)
434 PRK13633 cobalt transporter AT 100.0 4.1E-34 8.8E-39 330.6 22.3 206 601-818 4-233 (280)
435 PRK14235 phosphate transporter 100.0 4.5E-34 9.8E-39 328.1 22.5 205 598-817 16-250 (267)
436 cd03247 ABCC_cytochrome_bd The 100.0 3.5E-34 7.6E-39 309.0 20.2 166 602-811 1-178 (178)
437 PRK14245 phosphate ABC transpo 100.0 3.1E-34 6.7E-39 326.9 20.8 203 601-818 3-234 (250)
438 PRK14274 phosphate ABC transpo 100.0 5.2E-34 1.1E-38 326.7 22.7 204 600-818 11-243 (259)
439 PRK13640 cbiO cobalt transport 100.0 3.9E-34 8.5E-39 330.9 21.9 203 600-818 4-232 (282)
440 cd03264 ABC_drug_resistance_li 100.0 2.2E-34 4.7E-39 319.7 19.0 190 602-811 1-211 (211)
441 cd03266 ABC_NatA_sodium_export 100.0 2.9E-34 6.2E-39 320.5 20.0 196 602-811 2-218 (218)
442 PRK13636 cbiO cobalt transport 100.0 4.5E-34 9.8E-39 330.5 22.2 201 601-818 5-231 (283)
443 TIGR02633 xylG D-xylose ABC tr 100.0 4.8E-34 1E-38 357.5 24.2 213 1219-1438 2-228 (500)
444 PRK13632 cbiO cobalt transport 100.0 4.5E-34 9.8E-39 328.9 21.9 203 600-818 6-231 (271)
445 PRK13539 cytochrome c biogenes 100.0 4.8E-34 1E-38 315.6 21.2 194 1218-1426 2-200 (207)
446 PRK14259 phosphate ABC transpo 100.0 6.3E-34 1.4E-38 327.1 22.8 205 599-818 11-253 (269)
447 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.3E-34 9.2E-39 317.4 20.6 190 602-811 1-211 (211)
448 PRK14248 phosphate ABC transpo 100.0 5.5E-34 1.2E-38 328.0 22.2 205 599-818 19-252 (268)
449 PRK13645 cbiO cobalt transport 100.0 4.6E-34 1E-38 331.9 21.8 207 600-818 5-240 (289)
450 TIGR02211 LolD_lipo_ex lipopro 100.0 3.5E-34 7.7E-39 320.5 19.9 193 602-808 2-220 (221)
451 PRK14251 phosphate ABC transpo 100.0 4.1E-34 8.8E-39 326.2 20.7 203 601-818 4-235 (251)
452 PRK13649 cbiO cobalt transport 100.0 4.4E-34 9.6E-39 330.9 21.3 206 601-818 2-234 (280)
453 PRK13536 nodulation factor exp 100.0 4.6E-34 1E-38 336.3 21.6 203 599-819 39-262 (340)
454 PRK14249 phosphate ABC transpo 100.0 6.5E-34 1.4E-38 324.4 22.2 203 601-818 4-235 (251)
455 PRK11831 putative ABC transpor 100.0 5.2E-34 1.1E-38 328.0 21.4 201 600-818 6-233 (269)
456 PRK14268 phosphate ABC transpo 100.0 4.9E-34 1.1E-38 326.5 21.0 204 600-818 11-242 (258)
457 PRK10261 glutathione transport 100.0 5.5E-34 1.2E-38 363.6 23.7 217 1218-1439 12-257 (623)
458 PRK14270 phosphate ABC transpo 100.0 5.9E-34 1.3E-38 324.8 21.5 203 601-818 4-235 (251)
459 PRK14239 phosphate transporter 100.0 6.3E-34 1.4E-38 324.9 21.6 203 601-818 5-236 (252)
460 COG4175 ProV ABC-type proline/ 100.0 3.2E-34 7E-39 312.2 18.1 213 1218-1439 4-253 (386)
461 PRK09493 glnQ glutamine ABC tr 100.0 5.9E-34 1.3E-38 322.6 21.2 199 602-818 2-225 (240)
462 TIGR01189 ccmA heme ABC export 100.0 3.1E-34 6.7E-39 315.0 18.3 192 1219-1423 1-197 (198)
463 cd03269 ABC_putative_ATPase Th 100.0 4E-34 8.7E-39 317.3 19.4 191 603-811 2-210 (210)
464 PRK10070 glycine betaine trans 100.0 5E-34 1.1E-38 340.4 21.5 188 621-819 42-255 (400)
465 TIGR03415 ABC_choXWV_ATP choli 100.0 3.2E-34 6.9E-39 339.6 19.6 188 621-819 38-255 (382)
466 PRK15134 microcin C ABC transp 100.0 5E-34 1.1E-38 359.2 22.6 217 1218-1439 5-245 (529)
467 TIGR02324 CP_lyasePhnL phospho 100.0 4.7E-34 1E-38 320.0 19.9 201 1219-1424 2-222 (224)
468 PRK10575 iron-hydroxamate tran 100.0 8E-34 1.7E-38 325.9 22.1 202 598-817 8-236 (265)
469 PRK10247 putative ABC transpor 100.0 5.7E-34 1.2E-38 319.2 20.3 198 600-814 6-223 (225)
470 TIGR03411 urea_trans_UrtD urea 100.0 7.1E-34 1.5E-38 322.5 21.3 197 602-817 3-230 (242)
471 PRK14240 phosphate transporter 100.0 9.1E-34 2E-38 323.1 22.2 202 601-817 3-233 (250)
472 PRK10938 putative molybdenum t 100.0 5.6E-34 1.2E-38 356.0 22.4 209 1218-1438 3-222 (490)
473 PRK00635 excinuclease ABC subu 100.0 3.2E-33 7E-38 372.6 30.9 209 1218-1439 600-905 (1809)
474 COG0410 LivF ABC-type branched 100.0 6.3E-34 1.4E-38 301.7 19.0 205 602-819 4-227 (237)
475 PLN03211 ABC transporter G-25; 100.0 4.6E-34 9.9E-39 363.1 21.5 201 1233-1442 81-298 (659)
476 COG4181 Predicted ABC-type tra 100.0 4.3E-34 9.4E-39 284.9 16.6 209 1218-1432 6-227 (228)
477 PRK10535 macrolide transporter 100.0 7.3E-34 1.6E-38 363.6 23.4 215 1218-1437 4-229 (648)
478 PRK13652 cbiO cobalt transport 100.0 1.1E-33 2.3E-38 326.7 22.5 201 601-818 3-227 (277)
479 PRK15079 oligopeptide ABC tran 100.0 9.2E-34 2E-38 332.9 22.3 210 599-819 6-252 (331)
480 PRK13642 cbiO cobalt transport 100.0 8.8E-34 1.9E-38 327.3 21.8 204 601-819 4-230 (277)
481 PRK14236 phosphate transporter 100.0 9.4E-34 2E-38 326.4 21.9 205 598-817 22-255 (272)
482 COG0411 LivG ABC-type branched 100.0 2.6E-34 5.6E-39 306.9 15.9 216 1219-1438 5-237 (250)
483 PRK10619 histidine/lysine/argi 100.0 8.8E-34 1.9E-38 324.4 21.3 202 600-818 4-241 (257)
484 PRK14247 phosphate ABC transpo 100.0 1E-33 2.2E-38 322.8 21.6 203 601-818 3-234 (250)
485 TIGR03410 urea_trans_UrtE urea 100.0 5.2E-34 1.1E-38 321.0 19.0 197 603-816 2-219 (230)
486 cd03223 ABCD_peroxisomal_ALDP 100.0 9.7E-34 2.1E-38 301.5 19.7 161 602-805 1-163 (166)
487 TIGR01257 rim_protein retinal- 100.0 1.2E-33 2.5E-38 382.7 25.5 216 1217-1438 927-1147(2272)
488 PRK10584 putative ABC transpor 100.0 1.2E-33 2.6E-38 317.6 21.6 196 601-810 6-227 (228)
489 TIGR01188 drrA daunorubicin re 100.0 5E-34 1.1E-38 333.3 19.2 187 621-819 7-214 (302)
490 PRK14243 phosphate transporter 100.0 1.7E-33 3.7E-38 322.8 23.2 204 600-818 9-248 (264)
491 PRK10771 thiQ thiamine transpo 100.0 2E-33 4.4E-38 316.5 23.4 197 602-818 2-219 (232)
492 TIGR02673 FtsE cell division A 100.0 4.5E-34 9.7E-39 318.0 17.8 188 602-806 2-214 (214)
493 PRK13648 cbiO cobalt transport 100.0 1.1E-33 2.5E-38 325.3 21.7 203 600-818 6-231 (269)
494 PRK11231 fecE iron-dicitrate t 100.0 1.2E-33 2.5E-38 323.0 21.6 198 602-817 3-226 (255)
495 TIGR00630 uvra excinuclease AB 100.0 8.6E-33 1.9E-37 356.0 32.0 214 1218-1438 612-923 (924)
496 KOG0060 Long-chain acyl-CoA tr 100.0 3.8E-31 8.3E-36 308.3 42.3 478 318-804 125-641 (659)
497 PRK14244 phosphate ABC transpo 100.0 8.3E-34 1.8E-38 323.6 19.9 202 602-818 6-237 (251)
498 PRK11264 putative amino-acid A 100.0 8.9E-34 1.9E-38 323.3 20.2 198 602-817 4-232 (250)
499 PRK14253 phosphate ABC transpo 100.0 1.3E-33 2.9E-38 321.5 21.6 202 601-817 3-232 (249)
500 PRK11124 artP arginine transpo 100.0 1.3E-33 2.9E-38 320.1 21.4 198 601-816 2-228 (242)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.8e-257 Score=2436.60 Aligned_cols=1221 Identities=42% Similarity=0.699 Sum_probs=1122.6
Q ss_pred CCCCCCCh--hhHHHHHhhHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhHh
Q 000521 199 DCNTDSSY--WDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYP 276 (1446)
Q Consensus 199 ~~e~~~~~--~s~~~f~Wl~pl~~~g~~~~L~~~Dl~~l~~~~~s~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~ 276 (1446)
.|.+.++. +|+++|||++|++++|||++|+.+|+|+++++++++.+.++|++.|+++.++++++|+++++++++|+|.
T Consensus 123 ~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~~~~~psl~~al~~~f~~~ 202 (1381)
T KOG0054|consen 123 NPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGRSGKKPSLLRALLRTFGRT 202 (1381)
T ss_pred CcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhccccCCcHHHHHHHHHHHHH
Confidence 34455555 9999999999999999999999999999999999999999999999998744345789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 277 YICLGLLKVVNDSIGFAGPLLLNKLIKFLQQG-SGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIY 355 (1446)
Q Consensus 277 ~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~-~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy 355 (1446)
++..++++.+.+...|++|.+++.++++++++ .+.+.||+|+++++++.++++++.++|+|...+.|+|+|+++.++||
T Consensus 203 ~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~IY 282 (1381)
T KOG0054|consen 203 FLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAIY 282 (1381)
T ss_pred HHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHH
Confidence 99999999999999999999999999999884 56788999999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 000521 356 QKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIA 435 (1446)
Q Consensus 356 ~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v~~~~~~~~~~~~ 435 (1446)
+|+|+++...+++.+.|+++|+|++|++|+.++..++|.+|.+|+|+++++++||.++|+++++|++++++++|+|.+++
T Consensus 283 ~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~a 362 (1381)
T KOG0054|consen 283 RKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFLA 362 (1381)
T ss_pred HhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 436 NLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFT 515 (1446)
Q Consensus 436 ~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (1446)
++++++|++.|+.+|+|++.|+|+|+|||+||||+||+.|.++|++.|++|++.++|..++.+++.+++.+.|+++.+++
T Consensus 363 ~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~t 442 (1381)
T KOG0054|consen 363 KKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVVT 442 (1381)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-HhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCcc
Q 000521 516 FGLFA-LMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSN 594 (1446)
Q Consensus 516 f~~~~-~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~ 594 (1446)
|++|+ ..++.++++++|+++++|++++.|+..+|+.++.++++.+|++|+++||..+|.++..... .+.
T Consensus 443 F~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~--~~~-------- 512 (1381)
T KOG0054|consen 443 FVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVER--SPD-------- 512 (1381)
T ss_pred HHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCcccccc--CCC--------
Confidence 99999 7788999999999999999999999999999999999999999999999998876632210 011
Q ss_pred CCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeCeEEEEc
Q 000521 595 FNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVP 674 (1446)
Q Consensus 595 ~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~~i~yv~ 674 (1446)
...+.+++++|++|+|+++++++ .|+||||+|++|++++|||++||||||||++|+||+++.+|++.++|.+||||
T Consensus 513 -~~~~~~i~i~~~sfsW~~~~~~~---tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv~ 588 (1381)
T KOG0054|consen 513 -EAGENAIEIKNGSFSWDSESPEP---TLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYVP 588 (1381)
T ss_pred -CCCCceEEEeeeeEecCCCCCcc---cccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEec
Confidence 23456799999999999743333 49999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEc
Q 000521 675 QVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLD 754 (1446)
Q Consensus 675 Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLD 754 (1446)
|+|||+||||||||+||++||++||++|+++|+|++|++.+|.||+|+|||+|.||||||||||+||||+|+++||||||
T Consensus 589 Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLD 668 (1381)
T KOG0054|consen 589 QQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLD 668 (1381)
T ss_pred cccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHhccccCcccccccchhh
Q 000521 755 DVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSL 834 (1446)
Q Consensus 755 ep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~ 834 (1446)
||+||||+||++|||++|+.| .+++||||+|||+++++++||+|++|+||+|.++|+|+|+++.+..+.++..+.+.+.
T Consensus 669 DplSAVDahvg~~if~~ci~~-~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~~ 747 (1381)
T KOG0054|consen 669 DPLSAVDAHVGKHIFEECIRG-LLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEESEQ 747 (1381)
T ss_pred CcchhhhHhhhHHHHHHHHHh-hhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccchhh
Confidence 999999999999999999977 8899999999999999999999999999999999999999976665554321111111
Q ss_pred hhh--hhhhhhcccc------hhhhhhhhccccccCCcchhHHHHHHHHhcCcchhHhHHHHHhh-hhHHHHHHHHHHHH
Q 000521 835 HMQ--KQEMRTNASS------ANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKF-SGWFITLVICLSAI 905 (1446)
Q Consensus 835 ~~~--~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~-~g~~~~~~~~~~~~ 905 (1446)
... ....+..... ........++......++..+..++|+++.|.++|++|+.|+++ .|+....+++++.+
T Consensus 748 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v 827 (1381)
T KOG0054|consen 748 EEEASEKDLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFV 827 (1381)
T ss_pred ccccccccccccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 000 0000000000 00000000011111112245566778889999999999999998 56666666678888
Q ss_pred HHHHHHhhhhhHhhhhhcccCCCCCC-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Q 000521 906 LMQASRNGNDLWLSYWVDTTGSSQTK-YSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVL 984 (1446)
Q Consensus 906 ~~~~~~~~~~~wl~~w~~~~~~~~~~-~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ 984 (1446)
..+++..+.++|+++|++........ .+..+|+++|++++++..++.+++++.+..++.++++++|++|+++++|+||+
T Consensus 828 ~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~ 907 (1381)
T KOG0054|consen 828 LTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMS 907 (1381)
T ss_pred HHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch
Confidence 99999999999999999875332221 46778999999999999999999999999999999999999999999999999
Q ss_pred cccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 985 FFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRR 1064 (1446)
Q Consensus 985 ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~ 1064 (1446)
|||+||+|||+||||+|++.+|..+|..+..++.+++.++++++++++..|+++++++|+.++|++++++|++++||++|
T Consensus 908 FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkR 987 (1381)
T KOG0054|consen 908 FFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKR 987 (1381)
T ss_pred hcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 000521 1065 LDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGS 1144 (1446)
Q Consensus 1065 l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~ 1144 (1446)
+|+.+|||+|+||+|+++|+.|||||+.|++|.+++.+++|.+++++|...+++||+++|+|+++++++.++++++++..
T Consensus 988 LesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~ 1067 (1381)
T KOG0054|consen 988 LESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLP 1067 (1381)
T ss_pred hhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988888888643
Q ss_pred cCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccc--cccCCCCCCCCCCCccEEEE
Q 000521 1145 RGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE--LCGYQSLSPDWPFQGLIEFQ 1222 (1446)
Q Consensus 1145 ~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~--~~~~~~~~~~wp~~g~I~f~ 1222 (1446)
. +..++|.+|++++|++++++.++|++++.+++|+.|+||||+.+|.+.|+|. ..+...||++||.+|+|+|+
T Consensus 1068 ~-----~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~ 1142 (1381)
T KOG0054|consen 1068 S-----GLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFE 1142 (1381)
T ss_pred C-----CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEE
Confidence 2 1146999999999999999999999999999999999999999999998883 12223388999999999999
Q ss_pred EEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCC
Q 000521 1223 NVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQS 1302 (1446)
Q Consensus 1223 nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQd 1302 (1446)
|++++|+|+.|+|||||||+|+||||||||||||||||||+++|+|+.||.+|+|.|||+||+++++++||+++++||||
T Consensus 1143 ~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQd 1222 (1381)
T KOG0054|consen 1143 DLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQD 1222 (1381)
T ss_pred EeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEecc
Q 000521 1303 PFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDEC 1380 (1446)
Q Consensus 1303 p~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEa 1380 (1446)
|+||+||+|+||||+++++|++||+|||+|+|+++++++ |||++|.|+|.|||.||||++||||||||++|||+||||
T Consensus 1223 PvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEA 1302 (1381)
T KOG0054|consen 1223 PVLFSGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEA 1302 (1381)
T ss_pred CceecCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecc
Confidence 999999999999999999999999999999999999998 999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1381 TANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1381 TS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||++|++||..||++||++|+|||||+||||++||+|||||+|||+|+|+|+|+|.++.
T Consensus 1303 TAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll 1361 (1381)
T KOG0054|consen 1303 TASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELL 1361 (1381)
T ss_pred cccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999876
No 2
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=3.7e-207 Score=2103.42 Aligned_cols=1392 Identities=31% Similarity=0.508 Sum_probs=1180.2
Q ss_pred ccchhhhHHHHHhhhhhHHH-HHhhhc-ccccCCc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc-ch
Q 000521 17 FSKCFDDMILDFATNMVTIF-IILIIG-ITQRSPR-QNQRINLMEKVFLHILPLVGACLSSVDVILLLKEKLHGEFV-SY 92 (1446)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 92 (1446)
+.+||.+..+..+++.++.+ ....+- ..++..+ ....+.+..|++...++++ ++++. ++...|..+.... .+
T Consensus 23 ~t~~f~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~ 98 (1522)
T TIGR00957 23 FTKCFQNTVLAWVPCFYLWVCFPCYFLYLSRHDRGYIQMTHLNKTKTALGFLLWI---VCWAD-LFYSFWERSHGRAPAP 98 (1522)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcCCcchHHHHHHHHHHHHHH---HHHHH-HHHHHHhccccccccc
Confidence 55999998887766666555 221111 1122222 4445667778776655543 23221 2233333222222 25
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhHHhhhhhhhhh--hh-HHHHHHHHHHHHHH
Q 000521 93 HEWLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIKPVMGILHQLVTFSSFEVLKC--LK-EICLVLLDIMFGIS 169 (1446)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~s~~l~~~~~~~~~~~~~~~rt~~~~~~~~~~--~~-~~~~~~~~~~~~~~ 169 (1446)
.+++++++.++++++++++++.||.|+.|||.++.+||++++++|++++||+|........ .. ....+++.++++.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (1522)
T TIGR00957 99 VFLVSPTLLGITMLLATFLIQLERRKGVQSSGIMLTFWLVALVCALAILRSKILLALKEDAIVDPFRDTTFYIYFALVLS 178 (1522)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhcccCCCcchhHHHHHHHHHHHHHHHHHHHHhhcccccccceehhhHHHHHHHHHH
Confidence 6788999999999999999999999999999999999999999999999999875321100 00 12233344444443
Q ss_pred HHHHhhccc-cCcccccccccccCCCCCCCCCCCCCChhhHHHHHhhHHHHHccccCCCCCCCCCCCCCCCChhHHHHHH
Q 000521 170 INIIRVKRA-SSRRSSIEESLLSVDGDVEEDCNTDSSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKL 248 (1446)
Q Consensus 170 ~~~~~~~~~-~~k~~~~~~~~~~~~~~~~~~~e~~~~~~s~~~f~Wl~pl~~~g~~~~L~~~Dl~~l~~~~~s~~~~~~~ 248 (1446)
.++. |. .+|+..+.+ . ..+.+++||+++|++||++|||+||++++|||++|+.+|||+++++++++.+.++|
T Consensus 179 ~~~~---~~~~~~~~~~~~-~---~~~~~~~~e~~a~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~ 251 (1522)
T TIGR00957 179 QLVL---SCFSDKSPLFSE-T---NHDPNPCPESSASFLSRITFWWITGMAVYGYRQPLEESDLWSLNKEDTSEMVVPVL 251 (1522)
T ss_pred HHHH---HhhcCCCCcccc-c---cccCCCCCcccCCHHHHHHHHHhHHHHHHHhcCCCChhhccCCCHhHhHHHHHHHH
Confidence 3222 22 222222211 0 11112479999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhc---------------------------------------CCCCchHHHHHHHHHhHhHHHHHHHHHHHHH
Q 000521 249 LSCWQAQRSC---------------------------------------NCTNPSLVRAICCAYGYPYICLGLLKVVNDS 289 (1446)
Q Consensus 249 ~~~w~~~~~~---------------------------------------~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~ 289 (1446)
++.|+++.++ +.++++|+++++++|++.++..++++++.++
T Consensus 252 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~l~~~~~~l~~~~ 331 (1522)
T TIGR00957 252 VENWKKECKKTRKQPVSAVYGKKDPSKPKGSSQLDANEEVEALIVKSPHKPRKPSLFKVLYKTFGPYFLMSFCFKAIHDL 331 (1522)
T ss_pred HHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccCCccHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999875310 1134789999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCC
Q 000521 290 IGFAGPLLLNKLIKFLQQG-SGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSE 368 (1446)
Q Consensus 290 ~~~~~P~ll~~li~~~~~~-~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy~K~L~l~~~~~~~ 368 (1446)
+.+++|++++.+++++.++ .+.+.||++++++++++++.+++.++|.|...+++.++|++|+..||+|+|+++...+++
T Consensus 332 ~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~ 411 (1522)
T TIGR00957 332 MMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALVITNSARKS 411 (1522)
T ss_pred HHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhcCC
Confidence 9999999999999999763 344568999999999999999999999999999999999999999999999999999888
Q ss_pred CChhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 369 FSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQ 448 (1446)
Q Consensus 369 ~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 448 (1446)
.++|+++|+|++|++++..+...+|.+|..|++++++++++|.++|+++++|++++++++|++.++++++++.++++++.
T Consensus 412 ~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 491 (1522)
T TIGR00957 412 STVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAMKTKTYQVAHMKS 491 (1522)
T ss_pred CCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCC
Q 000521 449 KDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALM--GHQL 526 (1446)
Q Consensus 449 ~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~--~~~L 526 (1446)
+|+|++.++|+++|||+||+||||+.+.+++++.|++|++..++..+...+..+.+...|.++.+++|++|.+. ++.+
T Consensus 492 ~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l 571 (1522)
T TIGR00957 492 KDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVALITFAVYVTVDENNIL 571 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 99999999999999999999999999999999999999999999998888887777888888888999999876 4679
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEe
Q 000521 527 DAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQD 606 (1446)
Q Consensus 527 t~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 606 (1446)
+++.+|+++++++++..|+..+|..++.+.++++|++||++||+.++.++..... ... .......++++|
T Consensus 572 ~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~--~~~--------~~~~~~~i~~~~ 641 (1522)
T TIGR00957 572 DAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIER--RTI--------KPGEGNSITVHN 641 (1522)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccc--ccc--------CCCCCCcEEEEE
Confidence 9999999999999999999999999999999999999999999876543211000 000 001123699999
Q ss_pred cEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeCeEEEEcCCCCCCCccHHH
Q 000521 607 ATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSGTIRD 686 (1446)
Q Consensus 607 ~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~~i~yv~Q~p~l~~~ti~~ 686 (1446)
++|+|+.. + +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+||||||+||++++||||
T Consensus 642 ~~~~~~~~-~---~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~i~yv~Q~~~l~~~Ti~e 717 (1522)
T TIGR00957 642 ATFTWARD-L---PPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKGSVAYVPQQAWIQNDSLRE 717 (1522)
T ss_pred eEEEcCCC-C---CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECCEEEEEcCCccccCCcHHH
Confidence 99999642 1 2459999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHH
Q 000521 687 NILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVAR 766 (1446)
Q Consensus 687 nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~ 766 (1446)
||.||.++|+++|++++++|++.+|++.+|+||+|.+|++|.+|||||||||+||||+|++|++++||||||+||+++++
T Consensus 718 NI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~ 797 (1522)
T TIGR00957 718 NILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGK 797 (1522)
T ss_pred HhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcC-cccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHhccccCcccccccchhh-----hhh---
Q 000521 767 WILSNAIMG-PHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSL-----HMQ--- 837 (1446)
Q Consensus 767 ~i~~~~~~~-~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~-----~~~--- 837 (1446)
++++.+... .+.+++|+|+|||+++.++.||+|++|++|+++++|+++++.++.+.+..+..+..... +..
T Consensus 798 ~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 877 (1522)
T TIGR00957 798 HIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLEDSWTA 877 (1522)
T ss_pred HHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcchhHHHHHHhhccccccccccccccc
Confidence 999986521 15678999999999999999999999999999999999999765443332211000000 000
Q ss_pred ---hhhhhh-------cc---cchhh-h------h--hh---h---cc--ccccCCcchhHHHHHHHHhcCcchhHhHHH
Q 000521 838 ---KQEMRT-------NA---SSANK-Q------I--LL---Q---EK--DVVSVSDDAQEIIEVEQRKEGRVELTVYKN 887 (1446)
Q Consensus 838 ---~~~~~~-------~~---~~~~~-~------~--~~---~---~~--~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~ 887 (1446)
.+..+. .. ..+.. . . .. . .. +..+..+...+..++|.++.|.+++++|++
T Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~ 957 (1522)
T TIGR00957 878 LVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVYWD 957 (1522)
T ss_pred cccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhHHHHHHhcCcccHHHHHH
Confidence 000000 00 00000 0 0 00 0 00 000000011234456777889999999999
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 888 YAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAA 967 (1446)
Q Consensus 888 y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 967 (1446)
|+++.|+..+++++++.++.+++..++++|+++|++............+|+++|++++++..++.++..+++.+.+.+++
T Consensus 958 Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~~ 1037 (1522)
T TIGR00957 958 YMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQAS 1037 (1522)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999887766666777777888889999999999753211122334567889999999999888888888899999999
Q ss_pred HHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHH
Q 000521 968 VKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFI 1047 (1446)
Q Consensus 968 ~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~ 1047 (1446)
+++|++++++++++|++|||++|+|+++|||++|++.+|+.++..+..++..++.+++.++++++..|+++++++|++++
T Consensus 1038 ~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~~ 1117 (1522)
T TIGR00957 1038 RVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLGLL 1117 (1522)
T ss_pred HHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888888899998888998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 000521 1048 YSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQL 1127 (1446)
Q Consensus 1048 ~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~ 1127 (1446)
+++++++|.+++|++++++.++++|+++++.|+++|+.|||+||+|++|.+++.+..|.++++.+...+.++|++.++++
T Consensus 1118 ~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1197 (1522)
T TIGR00957 1118 YFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLEC 1197 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccc--c
Q 000521 1128 LAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC--G 1205 (1446)
Q Consensus 1128 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~--~ 1205 (1446)
++.+++.+++.+.+.. .+..++|.+|++++|+..+..++.++++.++++|++++|++|+.+|.+.|+|+.. +
T Consensus 1198 ~~~~~~~~~~~~~v~~------~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~ 1271 (1522)
T TIGR00957 1198 VGNCIVLFAALFAVIS------RHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQ 1271 (1522)
T ss_pred HHHHHHHHHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccccc
Confidence 8876555444444321 2345799999999999999999999999999999999999999999988877531 2
Q ss_pred CCCCCCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCC
Q 000521 1206 YQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII 1285 (1446)
Q Consensus 1206 ~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~ 1285 (1446)
...++++||.+|.|+|+||+|+|+++.++||+|+||+|+||||||||||||||||||+++|+|+++|++|+|.|||+||+
T Consensus 1272 ~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~ 1351 (1522)
T TIGR00957 1272 ETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIA 1351 (1522)
T ss_pred CCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEcc
Confidence 23455679999999999999999877778999999999999999999999999999999999999999999999999999
Q ss_pred CCChHhHhcceEEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHH
Q 000521 1286 NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLIC 1363 (1446)
Q Consensus 1286 ~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~ 1363 (1446)
+++++++|++|++|||||+||+||||+||||+++++|+|+|+|+++|+++++++++ ||||.++|+|.+||||||||+|
T Consensus 1352 ~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~ 1431 (1522)
T TIGR00957 1352 KIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVC 1431 (1522)
T ss_pred ccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998 9999999999999999999999
Q ss_pred HHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1364 LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|||||||+|+|||||||||+||.+||+.||++|++.|++||||+||||++++++||||+|||+|+|+|+|+|..+.
T Consensus 1432 LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl 1507 (1522)
T TIGR00957 1432 LARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLL 1507 (1522)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999875
No 3
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.1e-207 Score=2097.36 Aligned_cols=1409 Identities=31% Similarity=0.519 Sum_probs=1164.6
Q ss_pred CccCCCCcc-ccccc------cccchhhhHHHHHhhhhhHHH-HHhhhc-ccc-cCCcccchhhHHHHHHHHHHHHHHHH
Q 000521 2 DFICPNSPF-VWDGS------TFSKCFDDMILDFATNMVTIF-IILIIG-ITQ-RSPRQNQRINLMEKVFLHILPLVGAC 71 (1446)
Q Consensus 2 ~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~~~~k~~~~~~~~~~~~ 71 (1446)
+-+|+.... +|.+. .+.+||++..+..+++..... ..+.+- .++ .+...+..+..+.|..+.++++...+
T Consensus 7 ~~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1622)
T PLN03130 7 DWYCRPVPNGVWAKKVDNAFGAYTPCATDSLVINISHLVLLGLCLYRIWLIKKDHKVQRFCLRSKWYNYFLALLAAYCTA 86 (1622)
T ss_pred hhhcCCCccCCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHhccccccCCccccchHHHHHHHHHHHHHHH
Confidence 347964322 35553 466999995444444433332 111111 111 12222333356666666555544333
Q ss_pred HHHHHHHHH---HHHhhc-CcccchhH-HHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHH---HHHHHHHHhH
Q 000521 72 LSSVDVILL---LKEKLH-GEFVSYHE-WLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIK---PVMGILHQLV 143 (1446)
Q Consensus 72 ~~~~~~~~~---~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~e~~~~~~~s~~l~~~~~~~---~~~~~~~~rt 143 (1446)
..++..... ..+... ..+..+.. +++.++..++++++.++.+.||.|+.+++..+.+||++. +++.++..
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 164 (1622)
T PLN03130 87 EPLFRLVMGISVLNLDGQTSLPPFEIVSLIVEALTWCSMLVMIGVETKIYIREFRWYVRFAVIYVLVGDAVMLNLVLS-- 164 (1622)
T ss_pred HHHHHHHHHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeehhHHHhhHHHHHHHHHH--
Confidence 333221111 011110 11122333 566778888888778889999999999999999999999 77776621
Q ss_pred Hhhhhhhhh---hhhHHHHHHHHHHHHHHHHHHhhccccCcccccc---cccc------cCCCCCCCCCCCCCChhhHHH
Q 000521 144 TFSSFEVLK---CLKEICLVLLDIMFGISINIIRVKRASSRRSSIE---ESLL------SVDGDVEEDCNTDSSYWDLMA 211 (1446)
Q Consensus 144 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~------~~~~~~~~~~e~~~~~~s~~~ 211 (1446)
..+.... .. ....+++.+++.++.+ ...+..++..... .+.. +.....+++||+++|++||++
T Consensus 165 --~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~ 239 (1622)
T PLN03130 165 --VKEYYSSFVLYL-YISEVAAQVLFGILLL--VYFPNLDPYPGYTPIGSESVDDYEYEELPGGEQICPERHANIFSRIF 239 (1622)
T ss_pred --HHHHHhccccce-ehhHHHHHHHHHHHHH--HHHhcCCCCcccccccccccccccccCCcccCCCCcccccCHHHHHH
Confidence 1111111 11 2222333333333221 1112222211110 0100 001112258999999999999
Q ss_pred HHhhHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhHhHHHHHHHHHHHHHHH
Q 000521 212 FKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYICLGLLKVVNDSIG 291 (1446)
Q Consensus 212 f~Wl~pl~~~g~~~~L~~~Dl~~l~~~~~s~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~ 291 (1446)
|||++|++++|||++|+.+|||+++++++++.+.++|++.|+++. + +++++|+++++++|++.++..++++++..++.
T Consensus 240 F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~-~-~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~ 317 (1622)
T PLN03130 240 FGWMTPLMQLGYKRPLTEKDVWKLDTWDQTETLYRSFQKCWDEEL-K-KPKPWLLRALNNSLGGRFWLGGFFKIGNDLSQ 317 (1622)
T ss_pred HHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHHh-c-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999865 2 35689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCh
Q 000521 292 FAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSD 371 (1446)
Q Consensus 292 ~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~ 371 (1446)
+++|++++.+++++.+....+.+++++++++++.++.+++.++|.+...+++.++|+.+...+|+|+++++...+++.++
T Consensus 318 ~~~P~ll~~li~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~ 397 (1622)
T PLN03130 318 FVGPLLLNLLLESMQNGEPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTS 397 (1622)
T ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCH
Confidence 99999999999999764444567777777777777777778888888899999999999999999999999998888899
Q ss_pred hHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 372 GEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDE 451 (1446)
Q Consensus 372 g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 451 (1446)
|+++|+|++|++++.+....+|.+|..|+++++++++||..+|+++++|++++++++|++.++++++++.++++++.+|+
T Consensus 398 G~ivnl~s~Dv~~i~~~~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~ 477 (1622)
T PLN03130 398 GKITNLMTTDAEALQQICQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDK 477 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHH
Q 000521 452 RIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMV 531 (1446)
Q Consensus 452 R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ 531 (1446)
|.+.++|+++|||+||+||||+.+.+++++.|++|++..++..+..++..+++...|.++.+++|++|.+.++.+|++.+
T Consensus 478 r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~v 557 (1622)
T PLN03130 478 RIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARA 557 (1622)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999888888888888888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEecEEEe
Q 000521 532 FTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSW 611 (1446)
Q Consensus 532 ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w 611 (1446)
|+++++++.+..|+..+|..+..+.++++|++||++|++.+|..+... .+. ......|+++|++|+|
T Consensus 558 f~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~----~~~---------~~~~~~I~~~nvsf~y 624 (1622)
T PLN03130 558 FTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPN----PPL---------EPGLPAISIKNGYFSW 624 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccC----Ccc---------cCCCCceEEEeeEEEc
Confidence 999999999999999999999999999999999999998765422100 000 0122469999999999
Q ss_pred cCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCC-cEEEEeCeEEEEcCCCCCCCccHHHHHhc
Q 000521 612 YCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH-GSIHASGSIAYVPQVPWILSGTIRDNILF 690 (1446)
Q Consensus 612 ~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~-G~i~~~~~i~yv~Q~p~l~~~ti~~nI~~ 690 (1446)
+..++ +++|+|+||++++|++++|+||+|||||||+++|+|+++|.+ |+|.++++||||+|+|||||+||||||+|
T Consensus 625 ~~~~~---~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreNI~f 701 (1622)
T PLN03130 625 DSKAE---RPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDNILF 701 (1622)
T ss_pred cCCCC---CceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHHHhC
Confidence 75322 346999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred CCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHH
Q 000521 691 GKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILS 770 (1446)
Q Consensus 691 g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~ 770 (1446)
|+++|+++|++++++|+|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++|++
T Consensus 702 g~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~ 781 (1622)
T PLN03130 702 GSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFD 781 (1622)
T ss_pred CCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHhccccCcccccccchhhhhhh--hhhh-hcccc
Q 000521 771 NAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQK--QEMR-TNASS 847 (1446)
Q Consensus 771 ~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~ 847 (1446)
+|+.+ .+++||+|+|||+++.++.||+|++|++|+|+++|+++|+.++.+.+..+..+.....+... .+.. .....
T Consensus 782 ~~l~~-~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 860 (1622)
T PLN03130 782 KCIKD-ELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEEEDDQTSS 860 (1622)
T ss_pred HHhhH-HhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhccccccccccccccccccccc
Confidence 98766 56889999999999999999999999999999999999998765444332211100000000 0000 00000
Q ss_pred hhh-h---hhhhcccc--ccCCcchhHHHHHHHHhcCcchhHhHHHHHhhhhH-HHHHHHHHHHHHHHHHHhhhhhHhhh
Q 000521 848 ANK-Q---ILLQEKDV--VSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGW-FITLVICLSAILMQASRNGNDLWLSY 920 (1446)
Q Consensus 848 ~~~-~---~~~~~~~~--~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~-~~~~~~~~~~~~~~~~~~~~~~wl~~ 920 (1446)
... . ........ .+..+......++|+++.|.+++++|++|+++.|. +.+++++++.++.++...++++|+++
T Consensus 861 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 940 (1622)
T PLN03130 861 KPVANGNANNLKKDSSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSE 940 (1622)
T ss_pred ccccccccccccccccccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 00000000 00000112234567788999999999999998653 34444455666778888899999999
Q ss_pred hhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHc
Q 000521 921 WVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSS 1000 (1446)
Q Consensus 921 w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~ 1000 (1446)
|++.... .......|+++|++++++..++.+++.+++.+.+.+++.++|++++++++++|++|||++|+|+|+|||++
T Consensus 941 w~~~~~~--~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~ 1018 (1622)
T PLN03130 941 WTDQGTP--KTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAK 1018 (1622)
T ss_pred HHhcccc--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHH
Confidence 9975322 12234568889999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHh
Q 000521 1001 DLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTET 1080 (1446)
Q Consensus 1001 D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Et 1080 (1446)
|++.+|..++..+..++..++.+++.++++++..|+++++++|+.++++.++++|.+++|++++++.++++|+++|+.|+
T Consensus 1019 Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Et 1098 (1622)
T PLN03130 1019 DLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEA 1098 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 99999999999999999999999888888888888888888898888888899999999999999999999999999999
Q ss_pred hcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHH
Q 000521 1081 LNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGL 1160 (1446)
Q Consensus 1081 l~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl 1160 (1446)
++|++|||+|+++++|.+++.+..|.+++..+.....++|+++++++++++++.+.+.+.+.... ........++.+|+
T Consensus 1099 l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~-~~~~~~~~~~~~G~ 1177 (1622)
T PLN03130 1099 LNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNG-RAENQAAFASTMGL 1177 (1622)
T ss_pred hCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccccchhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999887766555444443211 00011122678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccc--cCCCCCCCCCCCccEEEEEEEEEecCCCCcccce
Q 000521 1161 ALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC--GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHD 1238 (1446)
Q Consensus 1161 ~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~--~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~ 1238 (1446)
+++|++.+...++++.+.+.++|+.++|+||+.+|.+.|+|+.. +...+++.||.+|.|+|+||+|+|+++.++||+|
T Consensus 1178 ~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~ 1257 (1622)
T PLN03130 1178 LLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHG 1257 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecc
Confidence 99999999999999999999999999999999999998887532 2234556799999999999999998877789999
Q ss_pred eeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCC
Q 000521 1239 INFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH 1318 (1446)
Q Consensus 1239 isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~ 1318 (1446)
+||+|+||||||||||||||||||+++|+|+|+|++|+|.|||+||++++++++|++|++|||||+||+||||+||||++
T Consensus 1258 is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~ 1337 (1622)
T PLN03130 1258 LSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN 1337 (1622)
T ss_pred eeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHH
Q 000521 1319 MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAI 1396 (1446)
Q Consensus 1319 ~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I 1396 (1446)
+++|+|+|+|+++|+++++++++ ||||.++|+|.||||||||||||||||||+|+|||||||||+||.+||+.||++|
T Consensus 1338 ~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I 1417 (1622)
T PLN03130 1338 EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTI 1417 (1622)
T ss_pred CCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1397 SSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1397 ~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++.+++||+|+||||++|+++||||+|||+|+|+|+|+|..+.
T Consensus 1418 ~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eLl 1460 (1622)
T PLN03130 1418 REEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENLL 1460 (1622)
T ss_pred HHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999999998764
No 4
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.9e-203 Score=2062.27 Aligned_cols=1407 Identities=30% Similarity=0.515 Sum_probs=1158.8
Q ss_pred cCCCCc-cccccc------cccchhhhHHHHHhhhhhHHH-HHhhhc-c-cccCCcccchhhHHHHHHHHHHHHHHHHHH
Q 000521 4 ICPNSP-FVWDGS------TFSKCFDDMILDFATNMVTIF-IILIIG-I-TQRSPRQNQRINLMEKVFLHILPLVGACLS 73 (1446)
Q Consensus 4 ~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 73 (1446)
+|+... ..|.+. .+.+||++..+...++..... ..+.+- . ..++...+..+..+.|+.+.++++...+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (1495)
T PLN03232 9 YCKPIAEGFWEKTVDGAFGAYTPCAIDSLVMIVSHSVLLGLCFYRIWIILDNAKAQIYVLRKKYYNCVLGILACYCVVEP 88 (1495)
T ss_pred hcCCccccCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHHhhccccCCccccchHHHHHHHHHHHHHHHHH
Confidence 785322 245543 356999995444444433332 211111 1 012222223335666666655555433333
Q ss_pred HHHHHH---HHHHhhc-CcccchhH-HHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHH---HHHHHHHHhHHh
Q 000521 74 SVDVIL---LLKEKLH-GEFVSYHE-WLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIK---PVMGILHQLVTF 145 (1446)
Q Consensus 74 ~~~~~~---~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~e~~~~~~~s~~l~~~~~~~---~~~~~~~~rt~~ 145 (1446)
++.... ...+... .....+.. +++.++..++++.+..+.+.||.|+.+++..+.+||++. +++.++. .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 164 (1495)
T PLN03232 89 VLRLVMGISLFDMDEETDLPPFEVASLMVEAFAWFSMLVLIGLETKQYVKEFRWYVRFGVVYVLVADAVLLDLVL----P 164 (1495)
T ss_pred HHHHHHHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeehhHhhhhHHHHHHHH----H
Confidence 322111 0111111 11122333 666788888888777789999999999999999999999 7777762 1
Q ss_pred hhhhhhh---hhhHHHHHHHHHHHHHHHHHHhhccccCcccccc---ccccc------CCCCCCCCCCCCCChhhHHHHH
Q 000521 146 SSFEVLK---CLKEICLVLLDIMFGISINIIRVKRASSRRSSIE---ESLLS------VDGDVEEDCNTDSSYWDLMAFK 213 (1446)
Q Consensus 146 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~---~~~~~------~~~~~~~~~e~~~~~~s~~~f~ 213 (1446)
..+.... .. ....+++.+.+.+..+ ...|..++..... .+..+ .+....++||+++|+|||++|+
T Consensus 165 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~f~ 241 (1495)
T PLN03232 165 LKNSINRTALYL-CISSRCCQALFGILLL--VYIPELDPYPGYHILNNESLDNVEYDALRGGENICPERYASIFSRIYFS 241 (1495)
T ss_pred HHHHHhccccce-ehhHHHHHHHHHHHHH--HhcccCCCCCcccccccccccccccccccccCCCCccccCCHHHHHHHH
Confidence 1111111 11 1222222333222221 1113222211111 01111 0001226799999999999999
Q ss_pred hhHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhHhHHHHHHHHHHHHHHHHH
Q 000521 214 SIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYICLGLLKVVNDSIGFA 293 (1446)
Q Consensus 214 Wl~pl~~~g~~~~L~~~Dl~~l~~~~~s~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~ 293 (1446)
|++|++++||+++|+.+|||+|+++++++.+.++|++.|+++. + +++++|+++++++|++.++..++++++.+++.++
T Consensus 242 w~~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~-~-~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~ 319 (1495)
T PLN03232 242 WMTPLMQLGYRKPITEKDVWQLDQWDQTETLIKRFQRCWTEES-R-RPKPWLLRALNNSLGGRFWLGGIFKIGHDLSQFV 319 (1495)
T ss_pred HHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHhh-c-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999765 2 3568999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhH
Q 000521 294 GPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGE 373 (1446)
Q Consensus 294 ~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~ 373 (1446)
+|++++.++++++++...+.++.+++++++..++.+++.++|.+...+++.++|+.+...+|+|+++++...+++.++|+
T Consensus 320 ~P~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~ 399 (1495)
T PLN03232 320 GPVILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGK 399 (1495)
T ss_pred HHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHH
Confidence 99999999999976444456788888888888888999889999999999999999999999999999998888889999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 374 IQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERI 453 (1446)
Q Consensus 374 i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~ 453 (1446)
++|+|++|++++.+....+|.+|..|++++++++++|..+|++++++++++++++|++.++++++++.++++++.+|+|.
T Consensus 400 i~n~ls~Dv~~i~~~~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~ 479 (1495)
T PLN03232 400 VTNMITTDANALQQIAEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRV 479 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred HHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHH
Q 000521 454 RRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFT 533 (1446)
Q Consensus 454 ~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft 533 (1446)
+.++|+++|||+||+||||+.+.+++++.|++|++..++..+..++..+++...|.++.+++|++|.+.++.+|++.+|+
T Consensus 480 ~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~vf~ 559 (1495)
T PLN03232 480 GIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARAFT 559 (1495)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999888887777777888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEecEEEecC
Q 000521 534 CLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYC 613 (1446)
Q Consensus 534 ~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~ 613 (1446)
++++++.+..|+..+|..+..+.++++|++||++|++.++..+... .+. ......++++|++|+|+.
T Consensus 560 ~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~----~~~---------~~~~~~I~~~~vsF~y~~ 626 (1495)
T PLN03232 560 SLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQN----PPL---------QPGAPAISIKNGYFSWDS 626 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc----CCc---------CCCCCcEEEEeeEEEcCC
Confidence 9999999999999999999999999999999999997665321100 000 012346999999999975
Q ss_pred CCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcE-EEEeCeEEEEcCCCCCCCccHHHHHhcCC
Q 000521 614 NNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS-IHASGSIAYVPQVPWILSGTIRDNILFGK 692 (1446)
Q Consensus 614 ~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~-i~~~~~i~yv~Q~p~l~~~ti~~nI~~g~ 692 (1446)
.++ +++|+|+||+|++||+++|+||+|||||||+++|+|+++|++|. +.++++||||+|+|||||+||||||+||+
T Consensus 627 ~~~---~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~ 703 (1495)
T PLN03232 627 KTS---KPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGS 703 (1495)
T ss_pred CCC---CceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCC
Confidence 322 34699999999999999999999999999999999999999975 56789999999999999999999999999
Q ss_pred CCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHh
Q 000521 693 NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNA 772 (1446)
Q Consensus 693 ~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~ 772 (1446)
++|+++|++++++|+|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++|++++
T Consensus 704 ~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~ 783 (1495)
T PLN03232 704 DFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSC 783 (1495)
T ss_pred ccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHhccccCcccccccchhhhhhhhh-hhhcccc-h-h
Q 000521 773 IMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQE-MRTNASS-A-N 849 (1446)
Q Consensus 773 ~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~-~ 849 (1446)
+.+ .++++|+|+|||+++.++.||+|++|++|+|+++|+++|+.+..+.+..+..+.....+..+.. ...+... . .
T Consensus 784 l~~-~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (1495)
T PLN03232 784 MKD-ELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQEVNTNDENILKLGPT 862 (1495)
T ss_pred hhh-hhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhccccccccccccccccccccccc
Confidence 766 5688999999999999999999999999999999999999876544433322111000000000 0000000 0 0
Q ss_pred hhhhhhcc---ccccCCcchhHHHHHHHHhcCcchhHhHHHHHhhhh-HHHHHHHHHHHHHHHHHHhhhhhHhhhhhccc
Q 000521 850 KQILLQEK---DVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG-WFITLVICLSAILMQASRNGNDLWLSYWVDTT 925 (1446)
Q Consensus 850 ~~~~~~~~---~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~ 925 (1446)
.+....+. +..+..+......++|+++.|.+++++|++|+++.| ++.+++++++.++.++...++++|+++|++..
T Consensus 863 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~ 942 (1495)
T PLN03232 863 VTIDVSERNLGSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQS 942 (1495)
T ss_pred ccccccccccccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 00000000 000000011224466778889999999999999865 34444555566677788888999999998753
Q ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhh
Q 000521 926 GSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMI 1005 (1446)
Q Consensus 926 ~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~i 1005 (1446)
.. ......+|+++|++++++..++.+++.+++.+.+.++++++|++++++++++|++||+++|+|+++|||++|++.+
T Consensus 943 ~~--~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~i 1020 (1495)
T PLN03232 943 TP--KSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDI 1020 (1495)
T ss_pred CC--CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHH
Confidence 21 1223467899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchH
Q 000521 1006 DDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSS 1085 (1446)
Q Consensus 1006 d~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~ 1085 (1446)
|..++..+..++..++.+++.++++++..++++++++|+.++++.++.+|.+++|++++.+..+++|+++++.|+++|+.
T Consensus 1021 d~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~ 1100 (1495)
T PLN03232 1021 DRNVANLMNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLS 1100 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChH
Confidence 99999999998888888888877777777887788888888888888999999999999999999999999999999999
Q ss_pred HHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHH
Q 000521 1086 TIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYA 1165 (1446)
Q Consensus 1086 tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~ 1165 (1446)
|||+||++++|.+++.+..|.+++..+.....++|+..++++++++++.+.+.+.+.. .+........++.+|++++|+
T Consensus 1101 tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~g~~~~~~ 1179 (1495)
T PLN03232 1101 SIRAYKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLR-NGNAENQAGFASTMGLLLSYT 1179 (1495)
T ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cccccccccchHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999887765554444433332 111101112356788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccc--cCCCCCCCCCCCccEEEEEEEEEecCCCCcccceeeEEE
Q 000521 1166 APIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC--GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTI 1243 (1446)
Q Consensus 1166 ~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~--~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I 1243 (1446)
..+..+++++++.+.++|++++|+||+.++.+.|+|+.. +...++++||.+|.|+|+||+|+|+++.++||+|+||+|
T Consensus 1180 ~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I 1259 (1495)
T PLN03232 1180 LNITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFV 1259 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEE
Confidence 999999999999999999999999999999998887532 222345679999999999999999887778999999999
Q ss_pred eCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCCCCChH
Q 000521 1244 EGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDL 1323 (1446)
Q Consensus 1244 ~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~~~d~ 1323 (1446)
+||||||||||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||++|+||||+||||+++++|+
T Consensus 1260 ~~GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sde 1339 (1495)
T PLN03232 1260 SPSEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDA 1339 (1495)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC
Q 000521 1324 KIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK 1401 (1446)
Q Consensus 1324 ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~ 1401 (1446)
|+|+|+++++++++++++ ||||.++|+|.|||||||||+||||||+|+|+|||||||||+||.+||+.||++|++.++
T Consensus 1340 ei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~ 1419 (1495)
T PLN03232 1340 DLWEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFK 1419 (1495)
T ss_pred HHHHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcC
Confidence 999999999999999998 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1402 GMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1402 ~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||+|+||||++|+++||||+|||+|+|+|+|+|..+.
T Consensus 1420 ~~TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eLl 1457 (1495)
T PLN03232 1420 SCTMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQELL 1457 (1495)
T ss_pred CCEEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999998764
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1e-192 Score=1954.16 Aligned_cols=1215 Identities=27% Similarity=0.456 Sum_probs=1061.0
Q ss_pred CCCCCCChhhHHHHHhhHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhHhHH
Q 000521 199 DCNTDSSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYI 278 (1446)
Q Consensus 199 ~~e~~~~~~s~~~f~Wl~pl~~~g~~~~L~~~Dl~~l~~~~~s~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~~ 278 (1446)
+||+++|+|||++|||+||++++||+++|+.+|||+|+++++++.+.++|++.|+++..++.++++|+++++++|+|+++
T Consensus 4 ~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~L~~~l~~~~~~~~~ 83 (1490)
T TIGR01271 4 SPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELASAKKNPKLLNALRRCFFWRFV 83 (1490)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999987653334568999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 279 CLGLLKVVNDSIGFAGPLLLNKLIKFLQQGS--GHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQ 356 (1446)
Q Consensus 279 ~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~--~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy~ 356 (1446)
..++++++.+++.+++|++++++++++++.. ..+.++++++++++++++.+++.+++.|...++++++|++|...||+
T Consensus 84 ~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~ 163 (1490)
T TIGR01271 84 FYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYK 163 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999996422 23568899999999999999999999999999999999999999999
Q ss_pred HHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 357 KCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIAN 436 (1446)
Q Consensus 357 K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v~~~~~~~~~~~~~ 436 (1446)
|+|+++....++.++|+++|+|++|++++..+...+|.+|..|+++++++++||+++|+++++|++++++++|++.++++
T Consensus 164 K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~~ 243 (1490)
T TIGR01271 164 KTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLGQ 243 (1490)
T ss_pred HHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 437 LIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTF 516 (1446)
Q Consensus 437 ~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 516 (1446)
++.+.++++++.+|+|++.++|+++|||+||+||||+.|.+++++.|++|++..++..++..+...++...|.++++++|
T Consensus 244 ~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 323 (1490)
T TIGR01271 244 KMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVFLSV 323 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999888888888889999999999
Q ss_pred HHHHHhCCCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCccC
Q 000521 517 GLFALMGHQLDAAMVFTCLALFNSLISPLN-SFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNF 595 (1446)
Q Consensus 517 ~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~-~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~ 595 (1446)
++|.+.++ ++++.+||+++++++++.|+. .+|..+..+.++.+|++||++||..+|.++...
T Consensus 324 ~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~---------------- 386 (1490)
T TIGR01271 324 VPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEY---------------- 386 (1490)
T ss_pred HHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc----------------
Confidence 99988755 789999999999999999985 799999999999999999999998766432100
Q ss_pred CCCCceEEEEecEEEecCCC----------------c-c-----------cccccceeeeeEeeCCcEEEEEcCCCCcHH
Q 000521 596 NSKDMAVIMQDATCSWYCNN----------------E-E-----------EQNVVLNQVSLCLPKGSLVAVIGEVGSGKS 647 (1446)
Q Consensus 596 ~~~~~~i~~~~~~f~w~~~~----------------~-~-----------~~~~~l~~i~l~i~~G~~~~ivG~~GsGKS 647 (1446)
+.....+.++|++|.|+... . . ..+++|+|+||+|++|++++|+||||||||
T Consensus 387 ~~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKS 466 (1490)
T TIGR01271 387 NLTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKS 466 (1490)
T ss_pred cCCCCceEEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHH
Confidence 01123588999999995310 0 0 013579999999999999999999999999
Q ss_pred HHHHHHhcCccCCCcEEEEeCeEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCC
Q 000521 648 SLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKG 727 (1446)
Q Consensus 648 tll~~llg~~~~~~G~i~~~~~i~yv~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g 727 (1446)
|||++|+|+++|++|+|.++|+||||+|+||++++||+|||+||.++++++|++++++|+|++|++.+|+||+|.+|++|
T Consensus 467 TLl~~l~G~~~~~~G~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g 546 (1490)
T TIGR01271 467 SLLMMIMGELEPSEGKIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGG 546 (1490)
T ss_pred HHHHHHhCCCCCCCceEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEE
Q 000521 728 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQV 807 (1446)
Q Consensus 728 ~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i 807 (1446)
.+|||||||||+||||+|++|++|||||||||||+++++++++.|+.+ +.+++|+|+|||+++.++.||+|++|++|++
T Consensus 547 ~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~-~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i 625 (1490)
T TIGR01271 547 ITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCK-LMSNKTRILVTSKLEHLKKADKILLLHEGVC 625 (1490)
T ss_pred CCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHH-HhcCCeEEEEeCChHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999987655 5678999999999999999999999999999
Q ss_pred EEecChhHHHhccccCccccc--------------------------c--c-----c-h------hhhhhhhhh------
Q 000521 808 KWIGSSADLAVSLYSGFWSTN--------------------------E--F-----D-T------SLHMQKQEM------ 841 (1446)
Q Consensus 808 ~~~g~~~~l~~~~~~~~~~~~--------------------------~--~-----~-~------~~~~~~~~~------ 841 (1446)
.+.|+++++......+..... + . + . ....+..+.
T Consensus 626 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1490)
T TIGR01271 626 YFYGTFSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSII 705 (1490)
T ss_pred EEEcCHHHHHhcChHHHHHHhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999998753211100000 0 0 0 0 000000000
Q ss_pred -------------------------h--hcccch------hh----------hh---------------------h---h
Q 000521 842 -------------------------R--TNASSA------NK----------QI---------------------L---L 854 (1446)
Q Consensus 842 -------------------------~--~~~~~~------~~----------~~---------------------~---~ 854 (1446)
. .....+ .. .. . .
T Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1490)
T TIGR01271 706 LNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRG 785 (1490)
T ss_pred ccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhcccccccc
Confidence 0 000000 00 00 0 0
Q ss_pred ---hcc--cc--------------c-------c-CC-------c----c--hhHHHHHHHHhcCcchhHhHHHHHhhhhH
Q 000521 855 ---QEK--DV--------------V-------S-VS-------D----D--AQEIIEVEQRKEGRVELTVYKNYAKFSGW 894 (1446)
Q Consensus 855 ---~~~--~~--------------~-------~-~~-------~----~--~~~~~~~e~~~~g~v~~~~y~~y~~~~g~ 894 (1446)
.+. +. . . .. + + .....++|+++.|.++|++|++|+++.|+
T Consensus 786 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~ 865 (1490)
T TIGR01271 786 ENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNRN 865 (1490)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcCc
Confidence 000 00 0 0 00 0 0 01124456778899999999999998765
Q ss_pred -HHHHHHHHHHHHHHHHHhhhhhHhhhhhcccC-----C-CCC-----------CcchhhH-HHHHHHHHHHHHHHHHHH
Q 000521 895 -FITLVICLSAILMQASRNGNDLWLSYWVDTTG-----S-SQT-----------KYSTSFY-LVVLCIFCMFNSFLTLVR 955 (1446)
Q Consensus 895 -~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~-----~-~~~-----------~~~~~~~-l~~~~~l~~~~~~~~~~~ 955 (1446)
..+++++++.++.+++..++++|+.+|..... . .+. .....+| +.+|+++.++..++.+++
T Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1490)
T TIGR01271 866 LVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFR 945 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 44444456667778899999999999875210 0 000 0011233 445555555566777788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhH
Q 000521 956 AFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQV 1035 (1446)
Q Consensus 956 ~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~ 1035 (1446)
.+++...+.++++++|++++++++++|++||+++|+|+++|||++|++.+|+.+|..+..++..++.+++.++++++..|
T Consensus 946 ~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p 1025 (1490)
T TIGR01271 946 GLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQP 1025 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 1036 FFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSEL 1115 (1446)
Q Consensus 1036 ~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~ 1115 (1446)
+++++++|+++++++++++|.+++|++++++..+++|+++|+.|+++|+.|||+||++++|.+++.+.++.+++..+...
T Consensus 1026 ~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~ 1105 (1490)
T TIGR01271 1026 YIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYL 1105 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888999988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000521 1116 TASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY 1195 (1446)
Q Consensus 1116 ~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~ 1195 (1446)
+.++|+..++++++.+++..++++++.. ....+|.+|++++|++.+...++++++.+.++|+.+.|++|+.+|
T Consensus 1106 ~~~~wl~~~~~~i~~~~~~~~~~l~~~~-------~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~ 1178 (1490)
T TIGR01271 1106 STLRWFQMRIDIIFVFFFIAVTFIAIGT-------NQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKF 1178 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988765444433333321 113467799999999999999999999999999999999999999
Q ss_pred hcCCcccccc----------------CCCCCCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCH
Q 000521 1196 MDVPQEELCG----------------YQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGK 1259 (1446)
Q Consensus 1196 ~~~~~e~~~~----------------~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGK 1259 (1446)
.+.|+|+... ...+++.||..|.|+|+||+|+|+++.+++|+|+||+|+|||||||||||||||
T Consensus 1179 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGK 1258 (1490)
T TIGR01271 1179 IDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGK 1258 (1490)
T ss_pred hcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCH
Confidence 9887764211 012345799999999999999999877899999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHH
Q 000521 1260 SSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVE 1339 (1446)
Q Consensus 1260 STLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~ 1339 (1446)
|||+++|+|+++ .+|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+++|+||++++++++++
T Consensus 1259 STLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~ 1337 (1490)
T TIGR01271 1259 STLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIE 1337 (1490)
T ss_pred HHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHH
Confidence 999999999998 7999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh
Q 000521 1340 AV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN 1417 (1446)
Q Consensus 1340 ~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~ 1417 (1446)
++ ||||.|+|+|.||||||||||||||||||+|+|||||||||+||.+||+.||++|++.|++||||+||||++++.+
T Consensus 1338 ~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~ 1417 (1490)
T TIGR01271 1338 QFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLE 1417 (1490)
T ss_pred hCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHh
Confidence 98 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEeCCEEEEEeccchhh
Q 000521 1418 MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1418 ~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||+|||+|+|+|+|+|..+.
T Consensus 1418 ~DrIlvL~~G~ivE~g~p~~Ll 1439 (1490)
T TIGR01271 1418 CQQFLVIEGSSVKQYDSIQKLL 1439 (1490)
T ss_pred CCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999998775
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=5.2e-182 Score=1847.87 Aligned_cols=1234 Identities=32% Similarity=0.523 Sum_probs=1052.3
Q ss_pred CCCCCCCChhhHHHHHhhHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHH----------HHHhhh----------
Q 000521 198 EDCNTDSSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSC----------WQAQRS---------- 257 (1446)
Q Consensus 198 ~~~e~~~~~~s~~~f~Wl~pl~~~g~~~~L~~~Dl~~l~~~~~s~~~~~~~~~~----------w~~~~~---------- 257 (1446)
+.||+++||+.|+++.|++|++.+..|..|+.+|||+-..+.++-++..++.+. |+-...
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (1560)
T PTZ00243 59 PVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLDAS 138 (1560)
T ss_pred CCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeecccc
Confidence 468999999999999999999999999999999999988888876665555443 321000
Q ss_pred -------------------------------c------------------------------------------------
Q 000521 258 -------------------------------C------------------------------------------------ 258 (1446)
Q Consensus 258 -------------------------------~------------------------------------------------ 258 (1446)
+
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (1560)
T PTZ00243 139 SRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSSTG 218 (1560)
T ss_pred ccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeecccc
Confidence 0
Q ss_pred ---------CCCCchHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-chHHHHHHHHHHHHHHHH
Q 000521 259 ---------NCTNPSLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSG-HLDGYVLAIALGLTSILK 328 (1446)
Q Consensus 259 ---------~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~-~~~g~~l~~~l~~~~~~~ 328 (1446)
.++..+|+++++++|++.++..++++++.+++.+++|++++.++++++++.. ...++++++++++++++.
T Consensus 219 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~~~ 298 (1560)
T PTZ00243 219 SVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQLIQ 298 (1560)
T ss_pred cccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHH
Confidence 0123479999999999999999999999999999999999999999976333 345788888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC--CCChhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 329 SFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERS--EFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVAL 406 (1446)
Q Consensus 329 ~~~~~~~~~~~~r~~~~ir~~L~~~iy~K~L~l~~~~~~--~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~ 406 (1446)
+++.++|.|...+.+.++|++|...+|+|+++++..+.. +.++|+++|+|++|++++..+..++|.+|..|+++++++
T Consensus 299 ~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li~~~ 378 (1560)
T PTZ00243 299 SVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLLLSI 378 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999887664 568899999999999999999999999999999999999
Q ss_pred HHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHH
Q 000521 407 YLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSE 486 (1446)
Q Consensus 407 ~lL~~~lg~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~E 486 (1446)
++||+.+|+++++|++++++++|++.++++++.+.++++++++|+|++.++|+++|||+||+||||+.|.+++++.|++|
T Consensus 379 ~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~E 458 (1560)
T PTZ00243 379 LLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARE 458 (1560)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 487 VKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLT 566 (1446)
Q Consensus 487 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~ 566 (1446)
++.+++..+..++..++++++|.++.+++|++|.+.++.||++.+||+++++++++.|+..+|..++.+.++++|++||+
T Consensus 459 l~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~ 538 (1560)
T PTZ00243 459 LRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRIS 538 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCCCchh----hhh-----hcCCCCcc----cCC----------------------------------CccCCCCC
Q 000521 567 RFLGCSEYKHE----LEQ-----AANSPSYI----SNG----------------------------------LSNFNSKD 599 (1446)
Q Consensus 567 ~fL~~~e~~~~----~~~-----~~~~~~~~----~~~----------------------------------~~~~~~~~ 599 (1446)
+||+.+|.... ... ....+... ... ........
T Consensus 539 ~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (1560)
T PTZ00243 539 TFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPS 618 (1560)
T ss_pred HHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhcccccccccccccc
Confidence 99987663110 000 00000000 000 00000112
Q ss_pred ceEEEEecEEEecCCCc----------------------------------ccccccceeeeeEeeCCcEEEEEcCCCCc
Q 000521 600 MAVIMQDATCSWYCNNE----------------------------------EEQNVVLNQVSLCLPKGSLVAVIGEVGSG 645 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~----------------------------------~~~~~~l~~i~l~i~~G~~~~ivG~~GsG 645 (1446)
..+.++|++|+|+.... ...+++|+|+||+|++|++++|+||||||
T Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsG 698 (1560)
T PTZ00243 619 PSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSG 698 (1560)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCc
Confidence 34667777777642100 01235799999999999999999999999
Q ss_pred HHHHHHHHhcCccCCCcEEEEeCeEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccC
Q 000521 646 KSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGE 725 (1446)
Q Consensus 646 KStll~~llg~~~~~~G~i~~~~~i~yv~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~ 725 (1446)
||||+++|+|+++|++|+|.++++||||+|+||++++||+|||.|+.++++++|++++++|+|++|++.+|+|++|.+|+
T Consensus 699 KSTLL~~i~G~~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~ 778 (1560)
T PTZ00243 699 KSTLLQSLLSQFEISEGRVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETEIGE 778 (1560)
T ss_pred HHHHHHHHhcCCCCCCcEEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHHhcC
Confidence 99999999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred CCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCC
Q 000521 726 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKG 805 (1446)
Q Consensus 726 ~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G 805 (1446)
+|.+|||||||||+||||+|++|++||||||||+||++++++++++++.+ ..+++|+|++||+++.++.||+|++|++|
T Consensus 779 ~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~-~~~~~TvIlvTH~~~~~~~ad~ii~l~~G 857 (1560)
T PTZ00243 779 KGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLG-ALAGKTRVLATHQVHVVPRADYVVALGDG 857 (1560)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHH-hhCCCEEEEEeCCHHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999987665 45689999999999999999999999999
Q ss_pred EEEEecChhHHHhccccCccccccc---ch--hhhhhhh--hhhhccc---c-h---hhhhhh-hccccccCCcchhHHH
Q 000521 806 QVKWIGSSADLAVSLYSGFWSTNEF---DT--SLHMQKQ--EMRTNAS---S-A---NKQILL-QEKDVVSVSDDAQEII 870 (1446)
Q Consensus 806 ~i~~~g~~~~l~~~~~~~~~~~~~~---~~--~~~~~~~--~~~~~~~---~-~---~~~~~~-~~~~~~~~~~~~~~~~ 870 (1446)
++.++|+++++.+... +..+.... .. ......+ ..+.... . . ..+... ...+............
T Consensus 858 ~i~~~G~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 936 (1560)
T PTZ00243 858 RVEFSGSSADFMRTSL-YATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAAGRLM 936 (1560)
T ss_pred EEEEecCHHHHHhChH-HHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccchhh
Confidence 9999999999875421 11111100 00 0000000 0000000 0 0 000000 0000000001122345
Q ss_pred HHHHHhcCcchhHhHHHHHhhhhHHH-HHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHH
Q 000521 871 EVEQRKEGRVELTVYKNYAKFSGWFI-TLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNS 949 (1446)
Q Consensus 871 ~~e~~~~g~v~~~~y~~y~~~~g~~~-~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 949 (1446)
++|+++.|.++|++|++|++..|... ++.++++.++.+++..++++|+++|++... ......|+++|+++.++..
T Consensus 937 ~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~----~~~~~~~l~~y~~~~~~~~ 1012 (1560)
T PTZ00243 937 TREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSF----KLSAATYLYVYLGIVLLGT 1012 (1560)
T ss_pred hHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----CCCcccHHHHHHHHHHHHH
Confidence 56777889999999999999876443 344444555667788889999999987421 1223467888888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhh
Q 000521 950 FLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVV 1029 (1446)
Q Consensus 950 ~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~ 1029 (1446)
++..++.+.....+.++++++|+.++++++++|++|||++|+|+++|||++|++.+|+.++..+..++..++.+++.+++
T Consensus 1013 ~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~ 1092 (1560)
T PTZ00243 1013 FSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILV 1092 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777788889999999999999999999999999999999999999999999999999999999888888888
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHH
Q 000521 1030 LSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQR 1109 (1446)
Q Consensus 1030 ~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~ 1109 (1446)
+++..|+++++++|+.++++.+.++|.+..|++++.+..+++|+++++.|+++|+.|||+||++++|.+++.+..|.+.+
T Consensus 1093 ~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~ 1172 (1560)
T PTZ00243 1093 TSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYS 1172 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHH
Confidence 88888988888888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 000521 1110 TSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSL 1189 (1446)
Q Consensus 1110 ~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv 1189 (1446)
+.+.....++|+..+++++..+++.+++++.+..... ..+..++|.++++++|+..+..+++++++.+.++|+++.|+
T Consensus 1173 ~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~ 1250 (1560)
T PTZ00243 1173 CSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTML--RATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSV 1250 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998876554444433322110 11224689999999999999999999999999999999999
Q ss_pred HHHHHHhcC-Ccccccc-------------------------CCCCC---CCCCCCccEEEEEEEEEecCCCCcccceee
Q 000521 1190 ERVLEYMDV-PQEELCG-------------------------YQSLS---PDWPFQGLIEFQNVTMRYKPSLPAALHDIN 1240 (1446)
Q Consensus 1190 ~Ri~~~~~~-~~e~~~~-------------------------~~~~~---~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is 1240 (1446)
+|+.+|.+. |+|+... ...++ +.||..|.|+|+||+|+|+++.++||+|||
T Consensus 1251 eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~vs 1330 (1560)
T PTZ00243 1251 ERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGVS 1330 (1560)
T ss_pred HHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecce
Confidence 999999964 3332100 01111 235677999999999999887778999999
Q ss_pred EEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCCCC
Q 000521 1241 FTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMN 1320 (1446)
Q Consensus 1241 l~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~~ 1320 (1446)
|+|+||||||||||||||||||+++|+|+++|++|+|.|||+||+++++++||++|++|||||+||+||||+||||++++
T Consensus 1331 f~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~ 1410 (1560)
T PTZ00243 1331 FRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEA 1410 (1560)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccC-CCEEEEeccCCCCCHHHHHHHHHHHH
Q 000521 1321 DDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKS-SKVLCLDECTANVDAQTASILQNAIS 1397 (1446)
Q Consensus 1321 ~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~-~~ILlLDEaTS~lD~~Te~~Iq~~I~ 1397 (1446)
+|+|+|+|+++|+++++++++ ||||.++|+|.|||||||||||||||||++ |+|||||||||+||.+||+.||++|+
T Consensus 1411 sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~ 1490 (1560)
T PTZ00243 1411 SSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVM 1490 (1560)
T ss_pred CHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHH
Confidence 999999999999999999998 999999999999999999999999999996 89999999999999999999999999
Q ss_pred HhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1398 SECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1398 ~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+.|++||||+||||++|+.+||||+|||+|+|+|+|+|..+.
T Consensus 1491 ~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl 1532 (1560)
T PTZ00243 1491 SAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELV 1532 (1560)
T ss_pred HHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999999998775
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.9e-143 Score=1348.51 Aligned_cols=1142 Identities=21% Similarity=0.251 Sum_probs=840.4
Q ss_pred hHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhccCCC------chHHHHHHHHHHHHHHHHHHH-HH
Q 000521 264 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLL---NKLIKFLQQGSG------HLDGYVLAIALGLTSILKSFF-DT 333 (1446)
Q Consensus 264 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll---~~li~~~~~~~~------~~~g~~l~~~l~~~~~~~~~~-~~ 333 (1446)
++++-+..+-++++++..+-.+...+-...+|++. ..+.+.+....+ ...-.++.+.+.+..++.+++ ..
T Consensus 14 ~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~~~lg~~~~~~~~~q~~ 93 (1228)
T KOG0055|consen 14 SFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYFVYLGVGVFISGFIQVS 93 (1228)
T ss_pred chHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444344456667777777777777788888754 333443332111 111111111222222222222 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
Q 000521 334 QYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-----SFHDAWSLPFQIGVALYL 408 (1446)
Q Consensus 334 ~~~~~~~r~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-----~~~~~~~~pl~i~i~~~l 408 (1446)
.+.+...|...++|......+ ||.+.+.++....|++.+-|+.|+++++++.. ++|.+-....-++++++.
T Consensus 94 c~~~~geRq~~riR~~yl~~i----LrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~ 169 (1228)
T KOG0055|consen 94 CWMRTGERQTARIRSKYLKAI----LRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYY 169 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HhCccceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466667777777777766555 55666777777779999999999999998643 333333333333443333
Q ss_pred HhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHH
Q 000521 409 LYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVK 488 (1446)
Q Consensus 409 L~~~lg~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~ 488 (1446)
.|++- ++.+.+..++.......++.+.+...+.+++..+.-+...|++++||+|-.|+.|+...++..+.-+.-.+
T Consensus 170 -~W~Lt---lv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k 245 (1228)
T KOG0055|consen 170 -GWKLT---LVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALK 245 (1228)
T ss_pred -HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHH
Confidence 33333 33444444455556777888888888888888899999999999999999999999888887766444444
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 489 HLSTRKYLDAWCVFFW--ATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLT 566 (1446)
Q Consensus 489 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~ 566 (1446)
...+......+...+. .+.......+|||..++..+..+++++|+.+...-.-...|.+..+.++.+.+|+++..+|.
T Consensus 246 ~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~ 325 (1228)
T KOG0055|consen 246 FGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIF 325 (1228)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHH
Confidence 4444444443332222 22223445688887777778899999999886666667788899999999999999999999
Q ss_pred HHhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcH
Q 000521 567 RFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGK 646 (1446)
Q Consensus 567 ~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGK 646 (1446)
+-++....-+.... ++. ......+.|+++|+.|+||++++ .++|+|+||+||+|+.+++||||||||
T Consensus 326 ~~i~~~~~i~~~~~---------~~~-~~~~~~g~ief~nV~FsYPsRpd---v~Il~g~sl~i~~G~~valVG~SGsGK 392 (1228)
T KOG0055|consen 326 ETIDRKPSIDPYSK---------GGR-VLSSIKGEIEFRNVCFSYPSRPD---VKILKGVSLKIPSGQTVALVGPSGSGK 392 (1228)
T ss_pred HHhcCCCCCCcccc---------cCC-cccccccceEEEEEEecCCCCCc---chhhCCeEEEeCCCCEEEEECCCCCCH
Confidence 99865432221110 000 11235678999999999998754 456999999999999999999999999
Q ss_pred HHHHHHHhcCccCCCcEEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHH
Q 000521 647 SSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDI 712 (1446)
Q Consensus 647 Stll~~llg~~~~~~G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di 712 (1446)
||++++|.|+|+|++|+|.++| +||.|+|+|.||++||+|||.||+| -+.++..++++....++.+
T Consensus 393 ST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi 472 (1228)
T KOG0055|consen 393 STLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFI 472 (1228)
T ss_pred HHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHH
Confidence 9999999999999999999997 5999999999999999999999986 4678888999998999999
Q ss_pred hhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcch
Q 000521 713 SLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA 792 (1446)
Q Consensus 713 ~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~ 792 (1446)
..+|+|++|.+||+|..|||||||||||||||.++|+||||||||||||+++++.+.+ ++.. ..+|+|.|+|+||++.
T Consensus 473 ~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~-ALd~-~~~grTTivVaHRLSt 550 (1228)
T KOG0055|consen 473 LKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQE-ALDK-ASKGRTTIVVAHRLST 550 (1228)
T ss_pred HhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHH-HHHH-hhcCCeEEEEeeehhh
Confidence 9999999999999999999999999999999999999999999999999998775554 4544 7789999999999999
Q ss_pred hhhCCEEEEEeCCEEEEecChhHHHhccccCcccccccchhhhhh----hhh-hhhcccch--hhhhhhhcccc--ccCC
Q 000521 793 ISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQ----KQE-MRTNASSA--NKQILLQEKDV--VSVS 863 (1446)
Q Consensus 793 l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~--~~~~~~~~~~~--~~~~ 863 (1446)
+++||+|++|++|+|+|.|+|+||++.++.+.++....+.....+ +.+ .+....+. ........... ....
T Consensus 551 IrnaD~I~v~~~G~IvE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~ 630 (1228)
T KOG0055|consen 551 IRNADKIAVMEEGKIVEQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLL 630 (1228)
T ss_pred hhccCEEEEEECCEEEEecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCccccccc
Confidence 999999999999999999999999988877766532221111000 000 00000000 00000000000 0000
Q ss_pred --cchhHHHHHHHHhcCcchhHhHHHHHh--hhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCC---CCcchhh
Q 000521 864 --DDAQEIIEVEQRKEGRVELTVYKNYAK--FSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQ---TKYSTSF 936 (1446)
Q Consensus 864 --~~~~~~~~~e~~~~g~v~~~~y~~y~~--~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~---~~~~~~~ 936 (1446)
...++..++...+.. ....++.-++ ...|..+++..+..++..+....-.+.+++..+...... .......
T Consensus 631 ~~~~~~e~~~~~~~~~~--~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~ 708 (1228)
T KOG0055|consen 631 SVKPEGEDPEEPVSEED--EKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRA 708 (1228)
T ss_pred ccccccccccccccccc--ccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHH
Confidence 000000000000000 1112333333 125666666666666665555444444444333221111 1122345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC--CChhHHHHHHHchhhhhccchHHHHH
Q 000521 937 YLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQ--TPGGRILNRFSSDLYMIDDSLPFILN 1014 (1446)
Q Consensus 937 ~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~--~~~G~ilnRfs~D~~~id~~l~~~l~ 1014 (1446)
|..+|++++++..+..++..+++.+.+.+...++|.+++++++++++.|||. +. |.+.+|+++|...+...+...+.
T Consensus 709 ~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~ 787 (1228)
T KOG0055|consen 709 WALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLS 787 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999996 56 99999999999999988888888
Q ss_pred HHHHHHHHHHHhhhhHHhHhHH---HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcchhHhHHHHhhcchHHHhhc
Q 000521 1015 ILLANFVGLLGIAVVLSYVQVF---FLLLLVPFWFIYSKLQFFYRS-TSRELRRLDSVSRSPIYASFTETLNGSSTIRAF 1090 (1446)
Q Consensus 1015 ~~~~~~~~~l~~~~~~~~~~~~---~~~~~~pl~~~~~~i~~~y~~-~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf 1090 (1446)
.++.++..++..+++.++..|- +.+++.|++++..+.+..+.. .+++.+....++ .....|++++++||++|
T Consensus 788 ~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea----~~iA~eai~NIrTV~al 863 (1228)
T KOG0055|consen 788 LVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEA----SKIAIEAVSNIRTVAAL 863 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH----HHHHHHHHHhHHHHHHH
Confidence 8888877777666665555554 456677887777666665543 344433322222 24678999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHH
Q 000521 1091 KSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVS 1170 (1446)
Q Consensus 1091 ~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~ 1170 (1446)
+.|++|.+.|.+.++...+...+.. .|-++...+-..++...-++...++... ...+..++..+..++.-+..-..
T Consensus 864 ~~e~~~~~~y~~~l~~p~~~~~~~~---~i~gl~f~~sqs~~~~~~A~~f~~G~~L-i~~g~~~~~~~~~vf~~l~~ta~ 939 (1228)
T KOG0055|consen 864 CAEEKFMELYKEELEKPRKSSFKRG---LISGLGFGFSQSLLFFVYALSFWYGARL-ISNGEMTFEDVFRVFMALSFTAM 939 (1228)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHhHHH-HhcCCcCHHHHHHHHHHHHHHHH
Confidence 9999999999999888877766543 3444443333333322222222222111 11344556655555544444455
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCC-CCcccceeeEEEeCCcEE
Q 000521 1171 LLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQV 1249 (1446)
Q Consensus 1171 ~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~Gekv 1249 (1446)
.+.......++.-++..|+.+++++++.+++-...........+.+|.|+|+||+|+||.. ..+||+|+||+|++||.+
T Consensus 940 ~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTv 1019 (1228)
T KOG0055|consen 940 ALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTV 1019 (1228)
T ss_pred HHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEE
Confidence 6677888889999999999999999988774321111111122468999999999999743 236999999999999999
Q ss_pred EEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCC-CCChHHHHHH
Q 000521 1250 GIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSV 1328 (1446)
Q Consensus 1250 gIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~-~~~d~ei~~a 1328 (1446)
|+||||||||||++.+|.|+|+|.+|.|.|||+||+++++++||++|++|+|||.||++||||||.++. ..+++||.+|
T Consensus 1020 ALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~A 1099 (1228)
T KOG0055|consen 1020 ALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEA 1099 (1228)
T ss_pred EEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999983 4699999999
Q ss_pred HHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 000521 1329 LEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVI 1406 (1446)
Q Consensus 1329 L~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI 1406 (1446)
++.++.++||.++ ||||.|||+|.+||||||||||||||++|||||||||||||+||.++|+.+|++|++...+||+|
T Consensus 1100 ak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~I 1179 (1228)
T KOG0055|consen 1100 AKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTI 1179 (1228)
T ss_pred HHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEE
Confidence 9999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1407 TIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1407 ~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+|||||+||++||.|.|+++|+|+|.|+-..|.
T Consensus 1180 vIAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L~ 1212 (1228)
T KOG0055|consen 1180 VIAHRLSTIQNADVIAVLKNGKVVEQGTHDELL 1212 (1228)
T ss_pred EEecchhhhhcCCEEEEEECCEEEecccHHHHH
Confidence 999999999999999999999999999866543
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.7e-131 Score=1337.74 Aligned_cols=1149 Identities=17% Similarity=0.201 Sum_probs=835.0
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 265 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 344 (1446)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~ 344 (1446)
+++-..+.+++.++...++.++..++....|+++.++++.+..... ...+++.++++.++..++...+.+...+++.
T Consensus 50 ~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 126 (1466)
T PTZ00265 50 PFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGEN---VNDIIFSLVLIGIFQFILSFISSFCMDVVTT 126 (1466)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333334456667777788888888888899999999987642211 1223344445556666777778888899999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HhhHhHHHHHHHHH
Q 000521 345 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYL-LYTQVKFAFVSGLA 422 (1446)
Q Consensus 345 ~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~l-L~~~lg~a~l~~~~ 422 (1446)
++...+...+|+|.++++...++....|++.+.++.|++.+...+. .+..+...++.++.++.+ ++....++. +.++
T Consensus 127 ~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lal-v~l~ 205 (1466)
T PTZ00265 127 KILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTL-CITC 205 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHHH
Confidence 9999999999999999999888888889999999999999887653 344555555554443332 222222222 2233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 423 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 502 (1446)
Q Consensus 423 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 502 (1446)
++.+++.+..++.+++.+..++..+..++..+.+.|.++||++||.|+.|+.+.+++.+..++..+...+.....++...
T Consensus 206 ~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~ 285 (1466)
T PTZ00265 206 VFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIG 285 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444445567788888888888888899999999999999999999999999999887655545544444444444322
Q ss_pred HHHHH--HHHHHHHHHHHHHHhCC--------CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 000521 503 FWATT--PTLFSLFTFGLFALMGH--------QLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCS 572 (1446)
Q Consensus 503 ~~~~~--~~~~~~~~f~~~~~~~~--------~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~ 572 (1446)
+.... ...+.++++|.+.+..+ .++++.+++.+........++..+...+..+..+.+|.+||.+.++.+
T Consensus 286 ~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~ 365 (1466)
T PTZ00265 286 MINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRK 365 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22222 22345677888877653 588898888765555545566666677889999999999999999764
Q ss_pred CCchhhhhhcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHH
Q 000521 573 EYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNS 652 (1446)
Q Consensus 573 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~ 652 (1446)
+..+.. . .... .+ ....++++|++|+|+..++ .++|+|+||+|++||+++|+||||||||||+++
T Consensus 366 ~~~~~~-~-~~~~---------~~-~~~~I~~~nVsf~Y~~~~~---~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~l 430 (1466)
T PTZ00265 366 PLVENN-D-DGKK---------LK-DIKKIQFKNVRFHYDTRKD---VEIYKDLNFTLTEGKTYAFVGESGCGKSTILKL 430 (1466)
T ss_pred CCCCCC-C-CCcc---------CC-CCCcEEEEEEEEEcCCCCC---CceeccceEEEcCCCEEEEECCCCCCHHHHHHH
Confidence 322110 0 0000 01 1136999999999975322 346999999999999999999999999999999
Q ss_pred HhcCccCCCcEEEEe-C-------------eEEEEcCCCCCCCccHHHHHhcCCC-------------------------
Q 000521 653 ILGEMMLTHGSIHAS-G-------------SIAYVPQVPWILSGTIRDNILFGKN------------------------- 693 (1446)
Q Consensus 653 llg~~~~~~G~i~~~-~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~------------------------- 693 (1446)
|+|+++|++|+|.++ | +||||+|+|.+|++||+|||.+|..
T Consensus 431 L~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (1466)
T PTZ00265 431 IERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNK 510 (1466)
T ss_pred HHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccc
Confidence 999999999999994 3 4899999999999999999998741
Q ss_pred ---------------------------------CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHH
Q 000521 694 ---------------------------------YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 740 (1446)
Q Consensus 694 ---------------------------------~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~l 740 (1446)
.++++..++++.+++++.+..+|+|++|.+|++|.+|||||||||+|
T Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaI 590 (1466)
T PTZ00265 511 RNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISI 590 (1466)
T ss_pred cccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHH
Confidence 23356777888889999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhhCCEEEEEeCC--------------
Q 000521 741 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKG-------------- 805 (1446)
Q Consensus 741 ARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~G-------------- 805 (1446)
|||++++|+|||||||||+||+++++.+.+. +.... .+|+|+|+||||++.+..||+|++|++|
T Consensus 591 ARAll~~P~ILlLDEpTSaLD~~se~~i~~~-L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~ 669 (1466)
T PTZ00265 591 ARAIIRNPKILILDEATSSLDNKSEYLVQKT-INNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGED 669 (1466)
T ss_pred HHHHhcCCCEEEEeCcccccCHHHHHHHHHH-HHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccc
Confidence 9999999999999999999999999988876 43311 2479999999999999999999999986
Q ss_pred ---------------------------------EEEEecChhHHHh-ccccCcccccccchhhhhh-----hhhh--hhc
Q 000521 806 ---------------------------------QVKWIGSSADLAV-SLYSGFWSTNEFDTSLHMQ-----KQEM--RTN 844 (1446)
Q Consensus 806 ---------------------------------~i~~~g~~~~l~~-~~~~~~~~~~~~~~~~~~~-----~~~~--~~~ 844 (1446)
+|+|+|+|+|+++ ..+.+..+.+......... .... ...
T Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~ 749 (1466)
T PTZ00265 670 PTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSS 749 (1466)
T ss_pred ccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccccccccc
Confidence 5999999999987 4555544432111000000 0000 000
Q ss_pred c-c-ch-h---hhhhh---hccc------cccCCcch-hHHHHH------HHH--hcCcc--hhHhHHHHHhhhhHHHHH
Q 000521 845 A-S-SA-N---KQILL---QEKD------VVSVSDDA-QEIIEV------EQR--KEGRV--ELTVYKNYAKFSGWFITL 898 (1446)
Q Consensus 845 ~-~-~~-~---~~~~~---~~~~------~~~~~~~~-~~~~~~------e~~--~~g~v--~~~~y~~y~~~~g~~~~~ 898 (1446)
. . .. . ..... .+.. .....++. .+...+ ++. ..... .+..+..+++...+. .+
T Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 828 (1466)
T PTZ00265 750 AYKDSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKD-VT 828 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHH-HH
Confidence 0 0 00 0 00000 0000 00000000 000000 000 00001 111222333222222 22
Q ss_pred HHHHHHHHHHHHHhhhhhHhhhhhcccCC-CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 899 VICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTK 977 (1446)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~ 977 (1446)
+.++++++..++....++.++.+.+.... .........|.+++++++++..++.++..++..+.+.+...+++.+++++
T Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ 908 (1466)
T PTZ00265 829 IIALSILVAGGLYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFEN 908 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22234445555555556666666553211 00111234567777788888888889999999999999999999999999
Q ss_pred HhcCCcccccC--CChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHH
Q 000521 978 IVNAPVLFFDQ--TPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFY 1055 (1446)
Q Consensus 978 vl~~p~~ff~~--~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y 1055 (1446)
+++.|++|||+ +++|++++|+++|++.+...+...+..++..++.+++.++++.+..|.++++++|+.++........
T Consensus 909 ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~ 988 (1466)
T PTZ00265 909 ILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIR 988 (1466)
T ss_pred HHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999996 8899999999999999999888888888888887777777777777777666555443332221111
Q ss_pred HH--HHHHHHHH-------------HHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000521 1056 RS--TSRELRRL-------------DSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLW 1120 (1446)
Q Consensus 1056 ~~--~sr~l~~l-------------~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w 1120 (1446)
.+ ..++.++. +.+..+.....++|+++|++|||+|+.|+++.+++.+..+...+..........+
T Consensus 989 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1466)
T PTZ00265 989 ARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSM 1068 (1466)
T ss_pred HHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 11111111 1222345667899999999999999999999999999998887776655444433
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCC
Q 000521 1121 LSLRLQLLAAFIISFIATMA-VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVP 1199 (1446)
Q Consensus 1121 l~~~l~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~ 1199 (1446)
+....+.+..+...++..+. .+.. .+..+.|.+..++.+.+.....+..+...+.++..+..+.+|+.++++.+
T Consensus 1069 ~~~~~~~~~~~~~~~~~~~G~~lv~-----~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~ 1143 (1466)
T PTZ00265 1069 LWGFSQSAQLFINSFAYWFGSFLIR-----RGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRK 1143 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 33333333222211111111 1111 23456666555554444444556778888999999999999999999876
Q ss_pred ccccc-cCCCCC--CCCCCCccEEEEEEEEEecCC-CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC---
Q 000521 1200 QEELC-GYQSLS--PDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--- 1272 (1446)
Q Consensus 1200 ~e~~~-~~~~~~--~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~--- 1272 (1446)
++... .....+ ...+..|.|+|+||+|+|++. ..+||+|+||+|+|||++||||+||||||||+++|+|+|+|
T Consensus 1144 ~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~ 1223 (1466)
T PTZ00265 1144 SNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKND 1223 (1466)
T ss_pred CcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccc
Confidence 54211 111111 112346889999999999743 24799999999999999999999999999999999999998
Q ss_pred ---------------------------------------------------CCceEEEcCeeCCCCChHhHhcceEEEeC
Q 000521 1273 ---------------------------------------------------CGGQILVDGLNIINTPVRDLRGRFAVVPQ 1301 (1446)
Q Consensus 1273 ---------------------------------------------------~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1301 (1446)
++|+|+|||+||+++++++||++|+||||
T Consensus 1224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Q 1303 (1466)
T PTZ00265 1224 HHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQ 1303 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCC
Confidence 69999999999999999999999999999
Q ss_pred CCCCCCCcHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000521 1302 SPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1378 (1446)
Q Consensus 1302 dp~lF~gTIR~NLdp~~-~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1378 (1446)
||+||+|||||||.++. +.+|+|+++|++.++++++|.++ ||||.|||+|.+|||||||||||||||+|+|+|||||
T Consensus 1304 ep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLD 1383 (1466)
T PTZ00265 1304 EPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLD 1383 (1466)
T ss_pred CCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999999884 47999999999999999999999 9999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhhcCEEEEEeC----CEE-EEEeccchhh
Q 000521 1379 ECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDH----GHL-VCISFICRYF 1439 (1446)
Q Consensus 1379 EaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~~----G~v-vE~~~~~~~~ 1439 (1446)
||||+||++||+.|+++|++.. +++|+|+||||++++++||+|+||++ |++ +|.|+...+.
T Consensus 1384 EaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl 1451 (1466)
T PTZ00265 1384 EATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELL 1451 (1466)
T ss_pred CcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHH
Confidence 9999999999999999999873 69999999999999999999999999 995 5899977654
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-85 Score=786.58 Aligned_cols=545 Identities=26% Similarity=0.355 Sum_probs=441.3
Q ss_pred hHhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCC-CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 882 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFA 960 (1446)
Q Consensus 882 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~ 960 (1446)
+...+.|.+.-.+++...+ ++.++......+.+.++...++.... ............+..++.++.+++..++.+++.
T Consensus 135 ~~rl~~l~~~~~~~l~~a~-~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~ 213 (716)
T KOG0058|consen 135 LKRLLGLLKPEWKWLVAAF-VLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQ 213 (716)
T ss_pred HHHHHHHhchhHHHHHHHH-HHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344556655444444333 23333444455556666554443221 111222333455667777888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHH--
Q 000521 961 FGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFL-- 1038 (1446)
Q Consensus 961 ~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~-- 1038 (1446)
+.+.+...++|..+|++++++.++|||.+.+|++++|++.|...+.+.++..+...+.+.+..++.+..+++.+|-+.
T Consensus 214 ~a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv 293 (716)
T KOG0058|consen 214 YAGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLV 293 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998888888887643
Q ss_pred -HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 1039 -LLLVPFW-FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELT 1116 (1446)
Q Consensus 1039 -~~~~pl~-~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~ 1116 (1446)
++.+|++ ++..++.++|++.+++.+. +-+.......|.+.+++|||+|+.|++..++|.+.+++..+...+...
T Consensus 294 ~~i~~P~v~~~~~~yG~~~rklS~~~Q~----a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~ 369 (716)
T KOG0058|consen 294 TLIVVPIVALVAKIYGKYLRKLSKQTQD----ALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAV 369 (716)
T ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344443 3444556666777766654 334455778899999999999999999999999988887666544433
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 000521 1117 ASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM 1196 (1446)
Q Consensus 1117 ~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~ 1196 (1446)
..-.+....++........ ...++.+ ....+.+++|.+...+.|...+...+.++...|.++.+..+|.+|++||+
T Consensus 370 a~~~f~~~~~~~~~~~~~s---iL~~Gg~-Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~ 445 (716)
T KOG0058|consen 370 AYGIFFGSTNLLGNLAVLS---ILFYGGH-LVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELM 445 (716)
T ss_pred HhhHhHhHHHHHHhHHHHH---HHHhccc-hhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHh
Confidence 3322222223332221111 1111111 12346678999999999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCCccEEEEEEEEEecCC-CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCc
Q 000521 1197 DVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1275 (1446)
Q Consensus 1197 ~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G 1275 (1446)
|.+|.-... ....|. +.+|.|+|+||+|+||.. ..+||||+||+|+|||.||+||||||||||++++|+|+|+|++|
T Consensus 446 dr~P~i~~~-G~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG 523 (716)
T KOG0058|consen 446 DRKPRIPLT-GTLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSG 523 (716)
T ss_pred ccCCCCCCC-Cccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCC
Confidence 987753222 111222 568999999999999744 23699999999999999999999999999999999999999999
Q ss_pred eEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCC
Q 000521 1276 QILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGI 1352 (1446)
Q Consensus 1276 ~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~-~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~ 1352 (1446)
+|++||+||++++.++||++|++|.|||+||+|||||||.++. ..+||||.+|.++++.++||.++ |+||.|||+|.
T Consensus 524 ~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~ 603 (716)
T KOG0058|consen 524 RILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGS 603 (716)
T ss_pred eEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccc
Confidence 9999999999999999999999999999999999999998875 46899999999999999999999 99999999999
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEE
Q 000521 1353 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCI 1432 (1446)
Q Consensus 1353 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~ 1432 (1446)
+|||||||||||||||+|||+|||||||||+||.|+|..||++|.+..+++|||+|||||+||+.+|+|+|+|+|+|+|.
T Consensus 604 qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~ 683 (716)
T KOG0058|consen 604 QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEM 683 (716)
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccch
Q 000521 1433 SFICR 1437 (1446)
Q Consensus 1433 ~~~~~ 1437 (1446)
|+-..
T Consensus 684 G~h~e 688 (716)
T KOG0058|consen 684 GTHDE 688 (716)
T ss_pred ccHHH
Confidence 96543
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=9.6e-78 Score=753.47 Aligned_cols=529 Identities=27% Similarity=0.382 Sum_probs=443.4
Q ss_pred HHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000521 901 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 980 (1446)
Q Consensus 901 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 980 (1446)
++..++.+....+.+++.....|..-.............++++.++...++.+++.+++...+.|....+-.++++++++
T Consensus 160 ~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~hll~ 239 (709)
T COG2274 160 LLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFRHLLR 239 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHc
Confidence 34555666667777777777766432222223333344556677788889999999999999999999999999999999
Q ss_pred CCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHH----HHHHHHHH
Q 000521 981 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIY----SKLQFFYR 1056 (1446)
Q Consensus 981 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~----~~i~~~y~ 1056 (1446)
.|++||.+.++|++++|+ +|++.|.+.+.......+..+...+..++++.+.+|.++++.+..++++ ...+.+.+
T Consensus 240 Lpl~~f~~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~l~ 318 (709)
T COG2274 240 LPLSYFEKRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPLLR 318 (709)
T ss_pred CcHHHccCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 5788888888777766666666666666666666665544333333322 33344444
Q ss_pred HHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 000521 1057 STSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFI 1136 (1446)
Q Consensus 1057 ~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~ 1136 (1446)
+..++.- +..+...++..|++.|+.|||+.+.|+++..++++..++..+..+.......|.+....++..+....+
T Consensus 319 ~~~~~~~----~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~i 394 (709)
T COG2274 319 RKTRKLI----EESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVLI 394 (709)
T ss_pred HHHHHHH----HHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444433 344455689999999999999999999999999999999999999888888887777666655433332
Q ss_pred HHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCC
Q 000521 1137 ATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQ 1216 (1446)
Q Consensus 1137 ~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~ 1216 (1446)
..+.+... ..+..+.|.+....+....+.+++..++..|+++.....+.+|+.+.++.|+|+..+.. +...|+.+
T Consensus 395 L~~G~~lV----l~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~~-~~~~~~~~ 469 (709)
T COG2274 395 LWFGAILV----LEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDKT-LIHLPKLQ 469 (709)
T ss_pred HHHHHHHH----hcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc-cccccccC
Confidence 22222111 13456788888888889999999999999999999999999999999999998643321 34556788
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
|.|+|+||+|+|+++.|++|+|+|++|+|||+|||||+||||||||+++|.|+|+|++|+|++||+|+++++++.+|++|
T Consensus 470 g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~i 549 (709)
T COG2274 470 GEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQV 549 (709)
T ss_pred ceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhhe
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCCcHHHhcCCCCCC-ChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1297 AVVPQSPFLFEGSLRDNLDPFHMN-DDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1297 ~~VpQdp~lF~gTIR~NLdp~~~~-~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
+|||||++||+||||||+..++.. +|||+++|++.+|++++++++ ||||++||+|.||||||||||+||||++++|+
T Consensus 550 g~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ 629 (709)
T COG2274 550 GYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPK 629 (709)
T ss_pred eEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCC
Confidence 999999999999999999988754 679999999999999999999 99999999999999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1374 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||||||||||++||+.|.+.|.+..++||+|+||||++++++||||+|||+|||+|.|+...+.
T Consensus 630 ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell 695 (709)
T COG2274 630 ILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELL 695 (709)
T ss_pred EEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999988764
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.5e-74 Score=731.38 Aligned_cols=528 Identities=26% Similarity=0.382 Sum_probs=425.8
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000521 902 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 981 (1446)
Q Consensus 902 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 981 (1446)
++.++........++++....+... ........+...++++.++..++.+...+...+.+.+...+++.++++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 98 (567)
T COG1132 21 LLLLLSALLSLLLPLLIGRIIDALL--ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLRL 98 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3444445555556666665544322 11112233444455555566666777777777778999999999999999999
Q ss_pred CcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 982 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1061 (1446)
Q Consensus 982 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~ 1061 (1446)
|+++|++++.|++++|+++|++.++..+......+...++.+++.++++....|.+.++++....++......+.+..+.
T Consensus 99 ~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
T COG1132 99 PLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKSRK 178 (567)
T ss_pred CHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998887775555545666677777777777766555444444444444444444466
Q ss_pred HHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000521 1062 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1141 (1446)
Q Consensus 1062 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1141 (1446)
..+...++.+.+.+.+.|+++|+++||+|+.++...+++.+..+...+...........+.....++..+....+.....
T Consensus 179 ~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (567)
T COG1132 179 LSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALGG 258 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666777788999999999999999999999998888888777776665544444444433333333322222211111
Q ss_pred HhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEE
Q 000521 1142 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1221 (1446)
Q Consensus 1142 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1221 (1446)
... ..+..+.|.+...+.+...+..++..+...+..++....+.+|+.++.+.+++...+... .++..|.|+|
T Consensus 259 ~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~---~~~~~~~I~f 331 (567)
T COG1132 259 FLV----LSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP---LKDTIGSIEF 331 (567)
T ss_pred HHH----HcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC---CCCCCCeEEE
Confidence 110 123356888999999999999999999999999999999999999999986653211111 3456788999
Q ss_pred EEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeC
Q 000521 1222 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1301 (1446)
Q Consensus 1222 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1301 (1446)
+||+|+|++ .+++|+|+||+|+|||++||||||||||||++++|+|+|+|++|+|.|||+||++++.++||++|++|||
T Consensus 332 ~~vsf~y~~-~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Q 410 (567)
T COG1132 332 ENVSFSYPG-KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQ 410 (567)
T ss_pred EEEEEEcCC-CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcc
Confidence 999999975 3579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000521 1302 SPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1378 (1446)
Q Consensus 1302 dp~lF~gTIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1378 (1446)
||+||+||||+||+++.+ .+|||+++|++.++++|+++++ |+||.+||+|.+||||||||+|||||++|+|+|||||
T Consensus 411 d~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILD 490 (567)
T COG1132 411 DPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILD 490 (567)
T ss_pred cceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999999999976 6999999999999999999999 9999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1379 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1379 EaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||++|++||+.|++.+++..+++|+|+||||++|+++||+|+|||+|+|+|.|++..+.
T Consensus 491 EaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl 551 (567)
T COG1132 491 EATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELL 551 (567)
T ss_pred ccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999888899999999999999999999999999999999998764
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.3e-74 Score=731.26 Aligned_cols=550 Identities=19% Similarity=0.227 Sum_probs=422.6
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccC-CCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 885 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTG-SSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGS 963 (1446)
Q Consensus 885 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~-~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~ 963 (1446)
++.|++...+..+ +.+++.++...+....++.+.+..+... ..........++.+++++.++..++.+++.+.....+
T Consensus 13 l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (588)
T PRK11174 13 LKQQSKPAKRWLN-LSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAG 91 (588)
T ss_pred HHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445554333322 2233444555555566666666555321 0111111223444555566667777788888888899
Q ss_pred HHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHH
Q 000521 964 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1043 (1446)
Q Consensus 964 ~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p 1043 (1446)
.+...+++.++++++++.|+++|++.++|++++|+++|++.+++.+...+..++..++..++.++++.+.+|.+.++++.
T Consensus 92 ~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~ 171 (588)
T PRK11174 92 QHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLG 171 (588)
T ss_pred HHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888777777777777777777777777765544433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 000521 1044 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1123 (1446)
Q Consensus 1044 l~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~ 1123 (1446)
..++...+...+.+..++..+...+..+.+.+.+.|.++|+++||+|++|+++.+++.+..++..+..........+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (588)
T PRK11174 172 TAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSSA 251 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334444444444444556677889999999999999999999999999999888887776655554444444
Q ss_pred HHHHHHHHHHHHHH-HHHHHhhcCCCCcCc----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcC
Q 000521 1124 RLQLLAAFIISFIA-TMAVIGSRGNLPATF----STPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV 1198 (1446)
Q Consensus 1124 ~l~~~~~~~~~~~~-~~~v~~~~~~~~~~~----~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~ 1198 (1446)
...++..+.+.++. ...... .+....+. .+......++.++..+..++..+...+.++..+..+.+|+.++++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 330 (588)
T PRK11174 252 VLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLET 330 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44433332221111 111111 11111111 1122233344566677888999999999999999999999999987
Q ss_pred CccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Q 000521 1199 PQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1278 (1446)
Q Consensus 1199 ~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ 1278 (1446)
++++..... .+.+.+..+.|+|+||+|.|.++ +++|+|+||+|+|||++||||+||||||||+++|+|+| |++|+|.
T Consensus 331 ~~~~~~~~~-~~~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~ 407 (588)
T PRK11174 331 PLAHPQQGE-KELASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLK 407 (588)
T ss_pred CCcccCCCc-cccCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEE
Confidence 664321111 11111234679999999888654 57999999999999999999999999999999999999 8999999
Q ss_pred EcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCC
Q 000521 1279 VDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFS 1355 (1446)
Q Consensus 1279 IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~-~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LS 1355 (1446)
+||+|+++++.+++|++|+||||||++|+|||||||.+++ +.+|+|+++|++.|+++++++++ |+||.+||+|.+||
T Consensus 408 i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LS 487 (588)
T PRK11174 408 INGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLS 487 (588)
T ss_pred ECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCC
Confidence 9999999999999999999999999999999999999885 58999999999999999999999 99999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEecc
Q 000521 1356 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFI 1435 (1446)
Q Consensus 1356 gGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~ 1435 (1446)
|||||||+||||++++|+|||||||||+||.+|++.|++.|++..+++|+|+||||++++.+||+|+||++|+++|.|+.
T Consensus 488 GGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~G~~ 567 (588)
T PRK11174 488 VGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQGDY 567 (588)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeecCCH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999997
Q ss_pred chhh
Q 000521 1436 CRYF 1439 (1446)
Q Consensus 1436 ~~~~ 1439 (1446)
..+.
T Consensus 568 ~eL~ 571 (588)
T PRK11174 568 AELS 571 (588)
T ss_pred HHHH
Confidence 7653
No 13
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=6.7e-74 Score=741.45 Aligned_cols=530 Identities=25% Similarity=0.353 Sum_probs=427.8
Q ss_pred HHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 899 VICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 978 (1446)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~v 978 (1446)
..+++.++........+++.+...+..............+.+++++.++..++..++.+.+.+.+.+...++++++++++
T Consensus 165 ~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~~l 244 (711)
T TIGR00958 165 SAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLRIREDLFRSL 244 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33345555666666677777766654321111111222344455556667777788888888999999999999999999
Q ss_pred hcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 979 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1058 (1446)
Q Consensus 979 l~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~ 1058 (1446)
++.|++||+++++|+++||+++|++.+++.+...+..++..++.+++.++++.+.+|.+.++++....+...+.+.+.+.
T Consensus 245 l~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~~~~~~~~~~ 324 (711)
T TIGR00958 245 LRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVFLAEKVFGKR 324 (711)
T ss_pred HcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888888888888888877777777776655444444444444444444
Q ss_pred HHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHH
Q 000521 1059 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTAS---LWLSLRLQLLAAFIISF 1135 (1446)
Q Consensus 1059 sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~---~wl~~~l~~~~~~~~~~ 1135 (1446)
.++..+...+..+...+++.|+++|+++||+|++|+++.+++.+..++..+......... .|....+..+..+++..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 404 (711)
T TIGR00958 325 YQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLGMLIQVLVLY 404 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444555667789999999999999999999999999999888777665543332 23222222222211111
Q ss_pred HHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCC
Q 000521 1136 IATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPF 1215 (1446)
Q Consensus 1136 ~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~ 1215 (1446)
+....+. .+..+.|.+..++.|...+..++..+...+.++.++..+.+|+.++++.+++...... ..+++.
T Consensus 405 ~g~~lv~-------~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~ 475 (711)
T TIGR00958 405 YGGQLVL-------TGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGT--LAPLNL 475 (711)
T ss_pred HHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC--CCCCCC
Confidence 1111111 3456788888899999999999999999999999999999999999987765422111 122456
Q ss_pred CccEEEEEEEEEecCC-CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhc
Q 000521 1216 QGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRG 1294 (1446)
Q Consensus 1216 ~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~ 1294 (1446)
+|.|+|+||+|+|+++ .+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|+
T Consensus 476 ~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~ 555 (711)
T TIGR00958 476 EGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHR 555 (711)
T ss_pred CCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHh
Confidence 7889999999999753 357999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeCCCCCCCCcHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000521 1295 RFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKS 1371 (1446)
Q Consensus 1295 ~i~~VpQdp~lF~gTIR~NLdp~~-~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1371 (1446)
+|++|||||++|+|||||||.++. ..+|+++++++++++++++++++ |+||.+||+|.+||||||||+|||||++++
T Consensus 556 ~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~~ 635 (711)
T TIGR00958 556 QVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVRK 635 (711)
T ss_pred hceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999774 46899999999999999999999 999999999999999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1372 SKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1372 ~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|+|||||||||+||++||+.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|++..+.
T Consensus 636 p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~ 701 (711)
T TIGR00958 636 PRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLM 701 (711)
T ss_pred CCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHH
Confidence 99999999999999999999999 3445799999999999999999999999999999999988764
No 14
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=8.2e-73 Score=732.35 Aligned_cols=527 Identities=21% Similarity=0.227 Sum_probs=423.8
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000521 902 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 981 (1446)
Q Consensus 902 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 981 (1446)
+..++........++.+....|..-..........+..+++++.++..++.+++.+.....+.+...+++..+++++++.
T Consensus 143 ~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~ 222 (686)
T TIGR03797 143 AMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWDRLLRL 222 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34445555555566666655553211111111223344556666677788888888899999999999999999999999
Q ss_pred CcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 982 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1061 (1446)
Q Consensus 982 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~ 1061 (1446)
|++||++.++|++++|++ |++.+.+.+...+...+..+...++.++++.+.+|++.++++.+.+++..+.....+..+.
T Consensus 223 ~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~ 301 (686)
T TIGR03797 223 PVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGLLQVR 301 (686)
T ss_pred CHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 7888888777666665555555555666666666665554443333333333233322233
Q ss_pred HHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000521 1062 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1141 (1446)
Q Consensus 1062 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1141 (1446)
..+...+..+...+++.|+++|+.|||++|.|+++.+++.+..++..+..+.....+.|.......+..+...++.++..
T Consensus 302 ~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~ 381 (686)
T TIGR03797 302 KERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFAAAI 381 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344556789999999999999999999999999999999998888888777777766555544332222221111
Q ss_pred HhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEE
Q 000521 1142 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1221 (1446)
Q Consensus 1142 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1221 (1446)
... ..+..+.|.+..+..+...+..++..+...+.++.....+.+|+.++++.++|..... . ...+..|.|+|
T Consensus 382 ~lv----~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~-~--~~~~~~~~I~~ 454 (686)
T TIGR03797 382 SLL----GGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK-T--DPGKLSGAIEV 454 (686)
T ss_pred HHH----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc-C--CCCCCCceEEE
Confidence 110 1244678888888888899999999999999999999999999999998776642211 1 11234678999
Q ss_pred EEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeC
Q 000521 1222 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1301 (1446)
Q Consensus 1222 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1301 (1446)
+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|++|||
T Consensus 455 ~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q 534 (686)
T TIGR03797 455 DRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQ 534 (686)
T ss_pred EEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEcc
Confidence 99999997666789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEec
Q 000521 1302 SPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDE 1379 (1446)
Q Consensus 1302 dp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDE 1379 (1446)
||++|+|||||||.++++.+|+++++|++.++++++++++ |+||.+||+|.+|||||||||+||||++++|+||+|||
T Consensus 535 ~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLDE 614 (686)
T TIGR03797 535 NGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFDE 614 (686)
T ss_pred CCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 9999999999999988778999999999999999999998 99999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchh
Q 000521 1380 CTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1380 aTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
|||+||++||+.|++.|++. ++|+|+||||++++..||+|+||++|+|+|.|++..+
T Consensus 615 pTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~L 671 (686)
T TIGR03797 615 ATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDEL 671 (686)
T ss_pred CccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999876 6899999999999999999999999999999998765
No 15
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.1e-72 Score=734.36 Aligned_cols=530 Identities=22% Similarity=0.294 Sum_probs=429.8
Q ss_pred HHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000521 903 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 982 (1446)
Q Consensus 903 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p 982 (1446)
+.++..+.....+++.+...|.............++.+++++.++..++.+++.++....+.+...+++.++++++++.|
T Consensus 162 ~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~ 241 (710)
T TIGR03796 162 AGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIKLAVGMSARFLWHILRLP 241 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34444555555666666655532111111112233445555666777888888899999999999999999999999999
Q ss_pred cccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 983 VLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSREL 1062 (1446)
Q Consensus 983 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l 1062 (1446)
++||++.++|++++|++.| +.+.+.+...+...+..++.+++.++++.+.+|+++++++..++++..+...+.+..+..
T Consensus 242 ~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~ 320 (710)
T TIGR03796 242 VRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFAAINVLALQLVSRRRVDA 320 (710)
T ss_pred HHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 567777776777777777777777777777777766655554444444444444444444
Q ss_pred HHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 000521 1063 RRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVI 1142 (1446)
Q Consensus 1063 ~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~ 1142 (1446)
.+......+...+++.|+++|+.+||++|+|+.+.+++.+..++..+..+.......|.......+..+...++.++...
T Consensus 321 ~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~ 400 (710)
T TIGR03796 321 NRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALILVVGGL 400 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556677899999999999999999999999999988888888777766666666655555444322222111111
Q ss_pred hhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccC----C-CCCCCCCCCc
Q 000521 1143 GSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGY----Q-SLSPDWPFQG 1217 (1446)
Q Consensus 1143 ~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~----~-~~~~~wp~~g 1217 (1446)
.. ..+..+.|.+..+..+...+..++..+...+.++.....+.+|+.++++.++|..... . ...+.++..|
T Consensus 401 ~v----~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~ 476 (710)
T TIGR03796 401 RV----MEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSG 476 (710)
T ss_pred HH----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCC
Confidence 10 1245678888888899999999999999999999999999999999998877642211 0 0111134568
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+
T Consensus 477 ~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~ 556 (710)
T TIGR03796 477 YVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVA 556 (710)
T ss_pred eEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhhee
Confidence 99999999999876678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCCcHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1298 VVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1298 ~VpQdp~lF~gTIR~NLdp~~-~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
||||||++|+|||||||.+++ +.+|++++++++.++++++++++ |+||.+||+|.+|||||||||+||||++++|+|
T Consensus 557 ~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~i 636 (710)
T TIGR03796 557 MVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSI 636 (710)
T ss_pred EEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCE
Confidence 999999999999999998875 47899999999999999999998 999999999999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1375 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||||||+||.+||+.|.+.|++ .++|+|+||||++++.+||||+|||+|+|+|.|++..+.
T Consensus 637 liLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~Ll 699 (710)
T TIGR03796 637 LILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEELW 699 (710)
T ss_pred EEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHHH
Confidence 999999999999999999999987 589999999999999999999999999999999987653
No 16
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=3.7e-72 Score=728.72 Aligned_cols=546 Identities=24% Similarity=0.317 Sum_probs=426.1
Q ss_pred hHhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 882 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 961 (1446)
Q Consensus 882 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 961 (1446)
+..+..|++...+.. ...++..++..+.....+++++.+.|.............+..+++++.++..++.+++.++...
T Consensus 144 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (708)
T TIGR01193 144 LLKFIPLITRQKKLI-VNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNV 222 (708)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444554333222 2233444555566666778888777643211111112223334455556677788888888899
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHH
Q 000521 962 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1041 (1446)
Q Consensus 962 ~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1041 (1446)
.+.+...+++.++++++++.|++||++.++|++++|++ |.+.+.+.+...+...+..+..++..++++.+.+|.+++++
T Consensus 223 ~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~ 301 (708)
T TIGR01193 223 LGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLS 301 (708)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999998 88877776655555555555555555555666666554443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 000521 1042 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1121 (1446)
Q Consensus 1042 ~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1121 (1446)
+..++++..+...+.+..++..+...+..+...+++.|+++|+.|||+||.|+++.+++.+..+...+..+.......+.
T Consensus 302 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (708)
T TIGR01193 302 LLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQ 381 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333334444444444455556677889999999999999999999999999888887777766655444443
Q ss_pred HHHHHHHHHH---HHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcC
Q 000521 1122 SLRLQLLAAF---IISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV 1198 (1446)
Q Consensus 1122 ~~~l~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~ 1198 (1446)
.....++..+ ++..++...+. .+..+.|.+..+..+...+..++..+...+.++.....+++|+.++++.
T Consensus 382 ~~~~~~~~~~~~i~il~~g~~lv~-------~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 454 (708)
T TIGR01193 382 QAIKAVTKLILNVVILWTGAYLVM-------RGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLV 454 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3333332222 11111111121 3456788888888999999999999999999999999999999999988
Q ss_pred CccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Q 000521 1199 PQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1278 (1446)
Q Consensus 1199 ~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ 1278 (1446)
++|..... .....++..|.|+|+||+|+|++ .+++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|+
T Consensus 455 ~~e~~~~~-~~~~~~~~~~~I~~~~vsf~y~~-~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~ 532 (708)
T TIGR01193 455 DSEFINKK-KRTELNNLNGDIVINDVSYSYGY-GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEIL 532 (708)
T ss_pred CCcccccc-cccCCCCCCCcEEEEEEEEEcCC-CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEE
Confidence 77643221 11223455789999999999964 35799999999999999999999999999999999999999999999
Q ss_pred EcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCC--CCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCC
Q 000521 1279 VDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF--HMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISF 1354 (1446)
Q Consensus 1279 IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~--~~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~L 1354 (1446)
+||+|+++++.+++|++|+||||||++|+|||||||.++ ...+|++++++++.++++++++++ ||||.++|+|.+|
T Consensus 533 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~L 612 (708)
T TIGR01193 533 LNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSI 612 (708)
T ss_pred ECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCC
Confidence 999999999999999999999999999999999999987 357899999999999999999998 9999999999999
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEec
Q 000521 1355 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISF 1434 (1446)
Q Consensus 1355 SgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~ 1434 (1446)
||||||||+||||++++|+|||||||||+||.+||+.+++.|++ .+++|+|+||||++++..||+|+||++|+++|.|+
T Consensus 613 SgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~-~~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~ 691 (708)
T TIGR01193 613 SGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLN-LQDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGS 691 (708)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHH-hcCCEEEEEecchHHHHcCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999999987 47899999999999999999999999999999999
Q ss_pred cchhh
Q 000521 1435 ICRYF 1439 (1446)
Q Consensus 1435 ~~~~~ 1439 (1446)
+..+.
T Consensus 692 ~~~L~ 696 (708)
T TIGR01193 692 HDELL 696 (708)
T ss_pred HHHHH
Confidence 87653
No 17
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=7.8e-72 Score=724.11 Aligned_cols=531 Identities=23% Similarity=0.306 Sum_probs=424.1
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000521 902 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 981 (1446)
Q Consensus 902 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 981 (1446)
++.++..+.....++.++...|.............+..+++++.++..++.+++.++....+.+...+++..+++++++.
T Consensus 154 ~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l 233 (694)
T TIGR03375 154 IASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGKKADLILSAKLFERVLGL 233 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 34444555556667777666653211111111222333444455667778888888999999999999999999999999
Q ss_pred CcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 982 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1061 (1446)
Q Consensus 982 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~ 1061 (1446)
|++| ++.++|++++|+ +|++.+.+.+...+...+..++.++..++++.+.+|++.++.+..++++..+...+.+..++
T Consensus 234 ~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 311 (694)
T TIGR03375 234 RMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPLVAIPLILLPGLLLQRPLSR 311 (694)
T ss_pred Cccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 788999999999 79999998887766666666555555556666666665544433333333333333333344
Q ss_pred HHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000521 1062 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1141 (1446)
Q Consensus 1062 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1141 (1446)
..+...+..+...+++.|+++|+++||+|++|+.+.+++.+..++..+..+.....+.+.....+++..+...++..+..
T Consensus 312 ~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~ 391 (694)
T TIGR03375 312 LAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQLVSVAIVVVGV 391 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444456667789999999999999999999999999999988887777776665555544444443322211111111
Q ss_pred HhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEE
Q 000521 1142 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1221 (1446)
Q Consensus 1142 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1221 (1446)
... ..+..+.|.+..++.+...+..++..+...+.++.....+.+|+.++++.++|...... .....+..|.|+|
T Consensus 392 ~~v----~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~-~~~~~~~~~~I~~ 466 (694)
T TIGR03375 392 YLI----SDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGTR-FLHRPRLQGEIEF 466 (694)
T ss_pred HHH----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-CCCCCCccceEEE
Confidence 100 12456788888889999999999999999999999999999999999988776422111 1111234678999
Q ss_pred EEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeC
Q 000521 1222 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1301 (1446)
Q Consensus 1222 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1301 (1446)
+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++++||||
T Consensus 467 ~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q 546 (694)
T TIGR03375 467 RNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQ 546 (694)
T ss_pred EEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEEECC
Confidence 99999997666689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000521 1302 SPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1378 (1446)
Q Consensus 1302 dp~lF~gTIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1378 (1446)
||++|+|||||||.++++ .+|++++++++.++++++++++ |+||.+||+|.+||||||||++||||++++|+|||||
T Consensus 547 ~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~iliLD 626 (694)
T TIGR03375 547 DPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPILLLD 626 (694)
T ss_pred ChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999999998865 7899999999999999999999 9999999999999999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1379 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1379 EaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||+||++||+.|++.|++..+++|+|+||||++++..||+|+||++|+++|.|++..+.
T Consensus 627 E~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl 687 (694)
T TIGR03375 627 EPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVL 687 (694)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHH
Confidence 9999999999999999999988999999999999999999999999999999999987664
No 18
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.7e-71 Score=709.59 Aligned_cols=530 Identities=23% Similarity=0.336 Sum_probs=419.1
Q ss_pred HHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcch--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 900 ICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYST--SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTK 977 (1446)
Q Consensus 900 ~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~--~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~ 977 (1446)
.+++.++........++++....+........... ..++.+++++.++..++.+.+.+.....+.+...+++.+++++
T Consensus 28 ~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 107 (592)
T PRK10790 28 AVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMDA 107 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445556666666777777776642111111111 1122234444455666677777788888999999999999999
Q ss_pred HhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 978 IVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRS 1057 (1446)
Q Consensus 978 vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~ 1057 (1446)
+++.|+++|++.+.|++++|+++|++.+++.+...+..++..+..+++.++++.+..|++.++++..+.+...+...+.+
T Consensus 108 l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~ 187 (592)
T PRK10790 108 ALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQR 187 (592)
T ss_pred HHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888888777777777777767666666543332222111122222222
Q ss_pred HHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHH
Q 000521 1058 TSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL-SLRLQLLAAFIISFI 1136 (1446)
Q Consensus 1058 ~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl-~~~l~~~~~~~~~~~ 1136 (1446)
..+...+......+.+..++.|+++|+.+||+||.|+++.+++.+..+...+..+.....+.+. .....++..+...++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (592)
T PRK10790 188 YSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGL 267 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2233333333455667889999999999999999999999999988777666655544433322 222222222211111
Q ss_pred HHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCC
Q 000521 1137 ATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQ 1216 (1446)
Q Consensus 1137 ~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~ 1216 (1446)
.+ +.+. ...+..+.|.+..++.+...+..++..+...+.++++...+.+|+.++++.++++.... ..++..
T Consensus 268 ~~--~~~~---~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~----~~~~~~ 338 (592)
T PRK10790 268 LM--LFGF---SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGND----DRPLQS 338 (592)
T ss_pred HH--HHHH---HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCC----ccCCCC
Confidence 11 1111 11345678888888899999999999999999999999999999999998765432111 123345
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
+.|+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+.+|++|
T Consensus 339 ~~i~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i 417 (592)
T PRK10790 339 GRIDIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGV 417 (592)
T ss_pred CeEEEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhhe
Confidence 789999999999753 5799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1297 AVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1297 ~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+||||||.+|+||||+||.+++..+|++++++++++|++++++.+ |+||.++|+|.+|||||||||+||||++++|+|
T Consensus 418 ~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~i 497 (592)
T PRK10790 418 AMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQI 497 (592)
T ss_pred EEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCE
Confidence 999999999999999999999888999999999999999999999 999999999999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1375 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+++|.|++..+.
T Consensus 498 lllDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~ 562 (592)
T PRK10790 498 LILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLL 562 (592)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999988899999999999999999999999999999999987653
No 19
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=9.2e-71 Score=690.48 Aligned_cols=543 Identities=23% Similarity=0.279 Sum_probs=470.1
Q ss_pred hHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 264 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 343 (1446)
Q Consensus 264 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~ 343 (1446)
+-++..++-+++.+....+..++..++.++.|++.+.++|.+-.+.+......+++++.+..++.+++.....|...+++
T Consensus 143 ~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~ 222 (709)
T COG2274 143 SWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLG 222 (709)
T ss_pred HhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556667778888889999999999999999999999999987777777888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhHhHHHHHHHH
Q 000521 344 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGL 421 (1446)
Q Consensus 344 ~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~ 421 (1446)
.|+...+...+|+|.+++|...++++++|++++.++ |.+.|.+++.. +..+...++-++....|.++ -+.-+++++
T Consensus 223 ~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~y-s~~L~li~l 300 (709)
T COG2274 223 KRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLY-SWKLTLIVL 300 (709)
T ss_pred HHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 999999999999999999999999999999999986 88889886643 33444555555544444444 344445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 422 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 501 (1446)
Q Consensus 422 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 501 (1446)
+.+++.+.+..++.+.+++..++.++...++.+.+.|.++||++||..+.|+.+..++++.-.+.++...+.........
T Consensus 301 ~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 380 (709)
T COG2274 301 AAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILN 380 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 56666667778888999999999999999999999999999999999999999999999988888888888777766665
Q ss_pred HHHHHHHHH--HHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhh
Q 000521 502 FFWATTPTL--FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 579 (1446)
Q Consensus 502 ~~~~~~~~~--~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~ 579 (1446)
.+......+ +.+++||++.+.++.+|.|.++++.++.+.+..|+..+...+..+.+++++.+|+.+.++.|...+...
T Consensus 381 ~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~ 460 (709)
T COG2274 381 TIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDK 460 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence 554444333 346899999999999999999999999999999999999999999999999999999998765433111
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccC
Q 000521 580 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 659 (1446)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~ 659 (1446)
.... .....+.|+++|++|.|..+++ ++|+|+||+|++||.++|||+||||||||+|+|+|.++|
T Consensus 461 ~~~~-----------~~~~~g~I~~~nvsf~y~~~~~----~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p 525 (709)
T COG2274 461 TLIH-----------LPKLQGEIEFENVSFRYGPDDP----PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKP 525 (709)
T ss_pred cccc-----------ccccCceEEEEEEEEEeCCCCc----chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 0000 1235578999999999986532 459999999999999999999999999999999999999
Q ss_pred CCcEEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCCCCh-hhHHHHHHHhcchHHHhhccCCCcccccC
Q 000521 660 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDP-QSYSETLKACTLDVDISLMVGGDMAYIGE 725 (1446)
Q Consensus 660 ~~G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~~~~-~~~~~v~~~~~l~~di~~~~~gd~t~ig~ 725 (1446)
.+|+|.+|| +|+||+|++.+|+|||+|||.++.|... |+..++++..+.++++..+|.|++|.+||
T Consensus 526 ~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E 605 (709)
T COG2274 526 QQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGE 605 (709)
T ss_pred CCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccccccc
Confidence 999999998 5999999999999999999999987644 78888888889999999999999999999
Q ss_pred CCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCC
Q 000521 726 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKG 805 (1446)
Q Consensus 726 ~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G 805 (1446)
+|.+||||||||++||||++++|+|+||||||||||+++++.|.+++ .. ..+|+|+|+||||++.+++||+|+||++|
T Consensus 606 ~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L-~~-~~~~~T~I~IaHRl~ti~~adrIiVl~~G 683 (709)
T COG2274 606 GGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNL-LQ-ILQGRTVIIIAHRLSTIRSADRIIVLDQG 683 (709)
T ss_pred CCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHH-HH-HhcCCeEEEEEccchHhhhccEEEEccCC
Confidence 99999999999999999999999999999999999999999999984 33 66789999999999999999999999999
Q ss_pred EEEEecChhHHHhccccCcc
Q 000521 806 QVKWIGSSADLAVSLYSGFW 825 (1446)
Q Consensus 806 ~i~~~g~~~~l~~~~~~~~~ 825 (1446)
+|+++|+++|+++..+.+.+
T Consensus 684 kiv~~gs~~ell~~~g~y~~ 703 (709)
T COG2274 684 KIVEQGSHEELLAQGGLYAR 703 (709)
T ss_pred ceeccCCHHHHHHhcChHHH
Confidence 99999999999987665543
No 20
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.6e-71 Score=707.40 Aligned_cols=530 Identities=25% Similarity=0.340 Sum_probs=429.4
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000521 902 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 981 (1446)
Q Consensus 902 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 981 (1446)
++.++...+....+++++.+.+.............+...++++.++..++.+++.+.....+.+....++..+++++++.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 111 (582)
T PRK11176 32 VALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGM 111 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33344444445556666665553221111111111222334455666677777777778888899999999999999999
Q ss_pred CcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 982 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1061 (1446)
Q Consensus 982 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~ 1061 (1446)
|.++|++.+.|++++|+++|++.+.+.+...+..++..++.+++.++++.+..|+++++++..+++..++.....+..++
T Consensus 112 ~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~ 191 (582)
T PRK11176 112 PVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRN 191 (582)
T ss_pred CHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888888888888887777777777776554444444433333344443344
Q ss_pred HHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000521 1062 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1141 (1446)
Q Consensus 1062 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1141 (1446)
..+......+.+.+++.|.++|+.+||+||.|+.+.+++.+..+...+..........|.....+.+..+...++..+..
T Consensus 192 ~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~ 271 (582)
T PRK11176 192 ISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAAS 271 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455667889999999999999999999999999999999998888877777776666666655433222222111
Q ss_pred HhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEE
Q 000521 1142 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1221 (1446)
Q Consensus 1142 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1221 (1446)
... ..+..+.|.+..++++...+..++..+...+.++.....+.+|+.++.+.+++...+.. ...|..+.|+|
T Consensus 272 ~~~----~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~---~~~~~~~~i~~ 344 (582)
T PRK11176 272 FPS----VMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKR---VIERAKGDIEF 344 (582)
T ss_pred HHH----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCc---CCCCCCCeEEE
Confidence 110 12456788888888999999999999999999999999999999999987665322111 12244578999
Q ss_pred EEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeC
Q 000521 1222 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1301 (1446)
Q Consensus 1222 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1301 (1446)
+||+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++|+||||
T Consensus 345 ~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 424 (582)
T PRK11176 345 RNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQ 424 (582)
T ss_pred EEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEcc
Confidence 99999998666789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHhcCCCC--CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000521 1302 SPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1377 (1446)
Q Consensus 1302 dp~lF~gTIR~NLdp~~--~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1377 (1446)
||++|+|||||||..+. .++|++++++++.++++++++++ ||||.+||+|.+|||||||||+||||++++|+||||
T Consensus 425 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ilil 504 (582)
T PRK11176 425 NVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILIL 504 (582)
T ss_pred CceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 99999999999998753 47899999999999999999999 999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchh
Q 000521 1378 DECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1378 DEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
|||||+||++|++.+.+.|++..+++|+|+||||+++++.||+|++|++|+|+|.|++..+
T Consensus 505 DEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l 565 (582)
T PRK11176 505 DEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAEL 565 (582)
T ss_pred ECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999998889999999999999999999999999999999997654
No 21
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.6e-71 Score=662.34 Aligned_cols=540 Identities=20% Similarity=0.220 Sum_probs=443.8
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 268 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQ-GSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 346 (1446)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~-~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~i 346 (1446)
.+.+..||.+..+.++.++.......-|.++.+++|.+.. .+......-....+..++++.+++...+.+.....+.++
T Consensus 140 ~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~rv 219 (716)
T KOG0058|consen 140 GLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQYAGERV 219 (716)
T ss_pred HHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555667888888888899999999999999999998876 333222233455666777888999998999999999999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHhhHhHHHHHHHHHHH
Q 000521 347 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVAL-YLLYTQVKFAFVSGLAIT 424 (1446)
Q Consensus 347 r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~pl~i~i~~-~lL~~~lg~a~l~~~~v~ 424 (1446)
-..+...+|++.++...+++++..+|++++.++.|++.+.+.+ .++.+..-+.++...++ +|++....++.+.-+ .+
T Consensus 220 ~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~~i-~~ 298 (716)
T KOG0058|consen 220 VARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLVTLI-VV 298 (716)
T ss_pred HHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHHHH-Hh
Confidence 9999999999999999999999999999999999999999865 45666666666654443 444444444443322 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 425 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 504 (1446)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 504 (1446)
.+.+.+..+++++.++..++.+++..+..+...|.+++||+||+|+.|+...++..+.-++-.+..+|...........+
T Consensus 299 P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~ 378 (716)
T KOG0058|consen 299 PIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGST 378 (716)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhHH
Confidence 33344567777888888888888888888999999999999999999998887777655444555544444333333222
Q ss_pred HH--HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhc
Q 000521 505 AT--TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 582 (1446)
Q Consensus 505 ~~--~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 582 (1446)
.. ....++++.+|.|++.++.||++...+++.+-..+..++..+...++.++++..+.+|+.+|++.+..-+... .
T Consensus 379 ~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~G--~ 456 (716)
T KOG0058|consen 379 NLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLTG--T 456 (716)
T ss_pred HHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCCC--c
Confidence 22 2245667889999999999999999999999999999999999999999999999999999997654322110 0
Q ss_pred CCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCc
Q 000521 583 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 662 (1446)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G 662 (1446)
..| ....+.|+|+|++|+||.+++ .++|+|+||+|+|||.+|+||||||||||+.++|+.+|+|++|
T Consensus 457 ~~p----------~~~~G~IeF~~VsFaYP~Rp~---~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG 523 (716)
T KOG0058|consen 457 LAP----------DHLQGVIEFEDVSFAYPTRPD---VPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSG 523 (716)
T ss_pred ccc----------ccccceEEEEEeeeecCCCCC---chhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCC
Confidence 011 134578999999999998654 4569999999999999999999999999999999999999999
Q ss_pred EEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000521 663 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1446)
Q Consensus 663 ~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 728 (1446)
+|.+|| +||+|.|+|-||++||+|||.+|.+ .++|+..++.+.+..++.|..+|+|++|.|||+|.
T Consensus 524 ~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~ 603 (716)
T KOG0058|consen 524 RILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGS 603 (716)
T ss_pred eEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccc
Confidence 999998 5999999999999999999999976 56788999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEE
Q 000521 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1446)
Q Consensus 729 ~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1446)
.|||||||||||||||+++|.||||||+|||||++++..+- .++.. ..+++|||+|+||++.+++||+|+++++|+++
T Consensus 604 qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq-~aL~~-~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~ 681 (716)
T KOG0058|consen 604 QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQ-EALDR-LMQGRTVLVIAHRLSTVRHADQIVVIDKGRVV 681 (716)
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHH-HHHHH-hhcCCeEEEEehhhhHhhhccEEEEEcCCeEE
Confidence 99999999999999999999999999999999999766554 44544 67789999999999999999999999999999
Q ss_pred EecChhHHHhcc-ccCcc
Q 000521 809 WIGSSADLAVSL-YSGFW 825 (1446)
Q Consensus 809 ~~g~~~~l~~~~-~~~~~ 825 (1446)
|.|+|+|+++.. +.+.+
T Consensus 682 E~G~h~eLl~~~~gly~~ 699 (716)
T KOG0058|consen 682 EMGTHDELLSKPNGLYAK 699 (716)
T ss_pred ecccHHHHhhCcccHHHH
Confidence 999999999876 34433
No 22
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-70 Score=647.88 Aligned_cols=497 Identities=24% Similarity=0.330 Sum_probs=423.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHH
Q 000521 934 TSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFIL 1013 (1446)
Q Consensus 934 ~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l 1013 (1446)
...+++.++++.++..++.+.+.......+.++...+|..+++++.+.+..+-...|+|++....+..++.++..+...+
T Consensus 39 l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryL 118 (559)
T COG4988 39 LLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYL 118 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 44566677777788888888888888889999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHhhhhHHhHhH---HHHHHHHHHHHHHHHHH-HHHH-HHHHHHHHHHHhhcchhHhHHHHhhcchHHHh
Q 000521 1014 NILLANFVGLLGIAVVLSYVQV---FFLLLLVPFWFIYSKLQ-FFYR-STSRELRRLDSVSRSPIYASFTETLNGSSTIR 1088 (1446)
Q Consensus 1014 ~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~pl~~~~~~i~-~~y~-~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIr 1088 (1446)
.....+....+.+++.+.+..| .++++..|++.++..+- ..-. ...++.. +...+-+||.+.++|+.|+|
T Consensus 119 Pq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~~a~~~s~~~~~-----~~~~ls~~FLD~LrGL~TLr 193 (559)
T COG4988 119 PQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGLAAKDASEKQFS-----ALARLSGHFLDRLRGLETLR 193 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-----HHHHHHHHHHHHhcChHHHH
Confidence 8887777766666666665554 45556667766654432 2222 2222332 33456689999999999999
Q ss_pred hcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHH
Q 000521 1089 AFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPI 1168 (1446)
Q Consensus 1089 af~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~ 1168 (1446)
+||..+...++..+..++..+..+....++.--+..+|++..+-+.++++.+.+...+. +..+....-+++..+--+
T Consensus 194 ~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~---G~ltl~~~l~~LiLAPEf 270 (559)
T COG4988 194 AFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGE---GDLTLFAGLFVLILAPEF 270 (559)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---CCccHHHHHHHHHHhHHH
Confidence 99999999999999999999999999888888889999998877766665554433221 233444445556667778
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcE
Q 000521 1169 VSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQ 1248 (1446)
Q Consensus 1169 ~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~Gek 1248 (1446)
..++..+-..|..-..+..+.+.+..+.+.|.+...........|..+.+++.+|++++|+++. ++++|+||+++|||+
T Consensus 271 f~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~ 349 (559)
T COG4988 271 FQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQL 349 (559)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCceeeecceEEecCCCC-cccCCceeEecCCcE
Confidence 8899999999999999999999999999988765333222233343445677779999998654 899999999999999
Q ss_pred EEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCCC-CChHHHHH
Q 000521 1249 VGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWS 1327 (1446)
Q Consensus 1249 vgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~-~~d~ei~~ 1327 (1446)
+||||+||||||||+++|+|+.+|++|+|.+||+|+.+++.+.+|+++++|||+|++|+|||||||.+++. .+|+++++
T Consensus 350 talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~ 429 (559)
T COG4988 350 TALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIA 429 (559)
T ss_pred EEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998876 68999999
Q ss_pred HHHHccHHHHHHh-CCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 000521 1328 VLEKCHVKEEVEA-VGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVI 1406 (1446)
Q Consensus 1328 aL~~~~L~~~i~~-lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI 1406 (1446)
+++++++.++++. .||||.+||+|.+|||||+||++||||++++++++++|||||+||.|||+.|++.|.+.++++|||
T Consensus 430 al~~a~l~~~v~~p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl 509 (559)
T COG4988 430 ALDQAGLLEFVPKPDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVL 509 (559)
T ss_pred HHHHhcHHHhhcCCCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEE
Confidence 9999999999986 499999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1407 TIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1407 ~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++.+.++|+|+|||+|+++|.|.++++.
T Consensus 510 ~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~ 542 (559)
T COG4988 510 VITHRLEDAADADRIVVLDNGRLVEQGTHEELS 542 (559)
T ss_pred EEEcChHHHhcCCEEEEecCCceeccCCHHHHh
Confidence 999999999999999999999999999999874
No 23
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.9e-70 Score=698.85 Aligned_cols=530 Identities=25% Similarity=0.362 Sum_probs=446.0
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000521 902 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 981 (1446)
Q Consensus 902 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 981 (1446)
++.++..++..+.+++++...+.............+.++++++.++..++.+++.++....+.+....++..+++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~~~ 100 (571)
T TIGR02203 21 VAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLLGL 100 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44455555555666666655543211111112223344566777777888888888999999999999999999999999
Q ss_pred CcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 982 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1061 (1446)
Q Consensus 982 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~ 1061 (1446)
|.++|++.+.|++++|+++|++.+++.+...+..++..++.+++.++++.+.+|+++++++.+.++...+...+.+..++
T Consensus 101 ~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~~~ 180 (571)
T TIGR02203 101 PVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRLRR 180 (571)
T ss_pred CHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888888888888888888888887776666666656566666665666
Q ss_pred HHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000521 1062 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1141 (1446)
Q Consensus 1062 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1141 (1446)
..+...+..+.+.+.+.|+++|+.+||+++.++++.+++.+..+...+..........+.....+++..+...++.++..
T Consensus 181 ~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 260 (571)
T TIGR02203 181 ISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFIAL 260 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666667788889999999999999999999999999999999998888877777777666655555432222222111
Q ss_pred HhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEE
Q 000521 1142 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1221 (1446)
Q Consensus 1142 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1221 (1446)
... ..+..++|.+..++.++..+..++..+...+.++.....+.+|+.++++.+++...... +. -+..+.|++
T Consensus 261 ~~~----~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~-~~--~~~~~~i~~ 333 (571)
T TIGR02203 261 FQA----QAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTR-AI--ERARGDVEF 333 (571)
T ss_pred HHH----HcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-CC--CCCCCeEEE
Confidence 110 13456789999999999999999999999999999999999999999987665422111 11 134578999
Q ss_pred EEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeC
Q 000521 1222 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1301 (1446)
Q Consensus 1222 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1301 (1446)
+||+|+|+++.+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++++||||
T Consensus 334 ~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 413 (571)
T TIGR02203 334 RNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQ 413 (571)
T ss_pred EEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEcc
Confidence 99999997655689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcHHHhcCCCC--CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000521 1302 SPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1377 (1446)
Q Consensus 1302 dp~lF~gTIR~NLdp~~--~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1377 (1446)
||++|+|||||||..++ +.+|+++++++++++++++++++ ||||.++|+|.+||||||||||||||++++|+|++|
T Consensus 414 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illL 493 (571)
T TIGR02203 414 DVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILIL 493 (571)
T ss_pred CcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999875 57999999999999999999998 999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchh
Q 000521 1378 DECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1378 DEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
|||||+||.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|++..+
T Consensus 494 DEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l 554 (571)
T TIGR02203 494 DEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNEL 554 (571)
T ss_pred eCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 9999999999999999999998899999999999999999999999999999999987765
No 24
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-72 Score=709.43 Aligned_cols=501 Identities=22% Similarity=0.285 Sum_probs=406.6
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHH
Q 000521 933 STSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFI 1012 (1446)
Q Consensus 933 ~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~ 1012 (1446)
....+...|+.+++...+..++...++.+.+.|...++|.+.++++||++++|||.+..|++..|+++|++.+.+.+...
T Consensus 69 ~~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geK 148 (1228)
T KOG0055|consen 69 EVSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEK 148 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHH
Confidence 34556777788888888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHHhHhHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhh
Q 000521 1013 LNILLANFVGLLGIAVVLSYVQVFFLLLL---VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRA 1089 (1446)
Q Consensus 1013 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIra 1089 (1446)
+..++..+...++.+++.++..|.+.+++ .|++++...+ +.+..-.....+..+.+.--+...|++.+++|+.+
T Consensus 149 vg~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~---~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~a 225 (1228)
T KOG0055|consen 149 VGNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGL---LARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYA 225 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 99999888888887777777777665544 4444433322 22221122222222333344678899999999999
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHH
Q 000521 1090 FKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIV 1169 (1446)
Q Consensus 1090 f~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~ 1169 (1446)
|+.|++..++|.+.++...|...+.. .|.++.....-.++....+....++.... .....++|.+..++...+.-.
T Consensus 226 f~gq~~e~~ry~~~L~~~~k~gi~~g---~~~G~~~G~~~~~~~~~~a~~~WyG~~li-~~~~~~~g~v~~v~~~vl~g~ 301 (1228)
T KOG0055|consen 226 FNGEKKEIERYSKALENALKFGIKKG---LFKGLGLGFTFFLLFASYALAFWYGSTLI-LNGGYNGGDVITVFFSVLIGG 301 (1228)
T ss_pred hcCcHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHHH-hcCCCCCceEEEEEeehhhhh
Confidence 99999999999999988888765542 23333333222222222222222221111 112344555555555555556
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCC-CcccceeeEEEeCCcE
Q 000521 1170 SLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSL-PAALHDINFTIEGGTQ 1248 (1446)
Q Consensus 1170 ~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~-~~vL~~isl~I~~Gek 1248 (1446)
..++.....+..+.++..|..++.+.++..++...........-..+|.|+|+||+|+||... .++|+|+||+|++||.
T Consensus 302 ~sLgqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~ 381 (1228)
T KOG0055|consen 302 MSLGQASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQT 381 (1228)
T ss_pred hhhhccccchHHHhccccchHHHHHHhcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCE
Confidence 667777778888889999999999998765543211111112223579999999999997542 3799999999999999
Q ss_pred EEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCC-CCChHHHHH
Q 000521 1249 VGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWS 1327 (1446)
Q Consensus 1249 vgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~-~~~d~ei~~ 1327 (1446)
||+||+|||||||++++|.|+|+|++|+|+|||.|+++++.++||++||+|.|||+||++||+|||.++. +.+++|+.+
T Consensus 382 valVG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~ 461 (1228)
T KOG0055|consen 382 VALVGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEE 461 (1228)
T ss_pred EEEECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987 458999999
Q ss_pred HHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEE
Q 000521 1328 VLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTV 1405 (1446)
Q Consensus 1328 aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~Tv 1405 (1446)
|++.++.++++..+ |+||.+||+|.+|||||||||||||||+|+|+||+||||||+||+++|+.+|++|++..+|+|.
T Consensus 462 a~k~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTT 541 (1228)
T KOG0055|consen 462 AAKAANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTT 541 (1228)
T ss_pred HHHHccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeE
Confidence 99999999999999 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCchhHhhcCEEEEEeCCEEEEEeccchhhh
Q 000521 1406 ITIAHRISTVLNMDEILILDHGHLVCISFICRYFI 1440 (1446)
Q Consensus 1406 I~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~~ 1440 (1446)
|+|||||+||+++|+|+||++|+|||.|++..+..
T Consensus 542 ivVaHRLStIrnaD~I~v~~~G~IvE~G~h~ELi~ 576 (1228)
T KOG0055|consen 542 IVVAHRLSTIRNADKIAVMEEGKIVEQGTHDELIA 576 (1228)
T ss_pred EEEeeehhhhhccCEEEEEECCEEEEecCHHHHHh
Confidence 99999999999999999999999999999887654
No 25
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.4e-70 Score=692.34 Aligned_cols=503 Identities=19% Similarity=0.238 Sum_probs=396.4
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000521 902 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLV--VLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIV 979 (1446)
Q Consensus 902 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl 979 (1446)
++.++..++....++.+++..+...... .....+.. .++++.++..++.++..+.....+.+...+++.+++++++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~id~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 97 (529)
T TIGR02868 20 LLGALALGSAVALLGVSAWLISRAAEMP--PVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRLA 97 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3344455555556666665555321111 11111111 1223344556666777777778888999999999999999
Q ss_pred cCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHH-HHHHHHHHHH
Q 000521 980 NAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIY-SKLQFFYRST 1058 (1446)
Q Consensus 980 ~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~-~~i~~~y~~~ 1058 (1446)
+.|.++|++.++|++++|+++|++.+++.+...+..++..++.+++.++++++..|.+.++++..+.++ .....++.+.
T Consensus 98 ~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~ 177 (529)
T TIGR02868 98 RLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLRA 177 (529)
T ss_pred ccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998888888887777777777777777777665554433322 2233334444
Q ss_pred HHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000521 1059 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIAT 1138 (1446)
Q Consensus 1059 sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 1138 (1446)
.++..+...+..+.+.+++.|+++|+++||+|++|+.+.+++.+..++..+..........+......++..+...++..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (529)
T TIGR02868 178 ARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAAQLLAAGLAVLGALW 257 (529)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444556678889999999999999999999999999999988888877666555544444333333322221111
Q ss_pred HHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCC-CCCCCCCCCc
Q 000521 1139 MAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQ-SLSPDWPFQG 1217 (1446)
Q Consensus 1139 ~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~-~~~~~wp~~g 1217 (1446)
+.... ...+..+.|.+...+.++..+..++..+...+.++.+...+.+|+.++++.++|...... .+...+|..+
T Consensus 258 ~g~~~----~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~ 333 (529)
T TIGR02868 258 AGGPA----VADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVVPAAGALGLGKP 333 (529)
T ss_pred HHHHH----HhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCcccCCCCc
Confidence 11110 012345688888888888889999999999999999999999999999987765322111 1112344567
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.|+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|++++ .+++|++|+
T Consensus 334 ~I~~~~vsf~Y~~~-~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~ 411 (529)
T TIGR02868 334 TLELRDLSFGYPGS-PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRIS 411 (529)
T ss_pred eEEEEEEEEecCCC-CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheE
Confidence 89999999999754 4699999999999999999999999999999999999999999999999999999 999999999
Q ss_pred EEeCCCCCCCCcHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1298 VVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1298 ~VpQdp~lF~gTIR~NLdp~~-~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
||||||++|+|||||||.+++ +.+|+++++|++.++++++++++ |+||.+||+|.+||||||||||||||++++|+|
T Consensus 412 ~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~i 491 (529)
T TIGR02868 412 VFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLALARALLADAPI 491 (529)
T ss_pred EEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999875 46999999999999999999998 999999999999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCc
Q 000521 1375 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRI 1412 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl 1412 (1446)
||||||||+||++||+.|++.+++..+++|+|+||||+
T Consensus 492 liLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 492 LLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 99999999999999999999999988999999999996
No 26
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.4e-69 Score=691.89 Aligned_cols=534 Identities=19% Similarity=0.187 Sum_probs=420.4
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 266 VRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQ-GSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 344 (1446)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~-~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~ 344 (1446)
++...+.+++.++...++.++..++...+|++++.++|.+.. +.+....+.++++++++.++..++.....+...+.+.
T Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (588)
T PRK11174 13 LKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAGQ 92 (588)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667788888888999999999999999999999997642 2222223344555666677788888888888899999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHhhHhHHHHHHH
Q 000521 345 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY---LLYTQVKFAFVSG 420 (1446)
Q Consensus 345 ~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~---lL~~~lg~a~l~~ 420 (1446)
++...+...+|+|.++++...+.+.++|++.|.+++|++++.+... .+..++...+.++++++ .+.+.+++..++
T Consensus 93 ~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~- 171 (588)
T PRK11174 93 HIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLG- 171 (588)
T ss_pred HHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999998889999999999999999998654 45555555554443333 233333433332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHH----HHHHHHHHHHHHHHH
Q 000521 421 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMK----TRSSEVKHLSTRKYL 496 (1446)
Q Consensus 421 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~----~R~~El~~~~~~~~~ 496 (1446)
++++...+..++.++.++..++.++..++..+.+.|.++|+++||.|++|+.+.+++++ .|+.+.+..+.....
T Consensus 172 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (588)
T PRK11174 172 --TAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLS 249 (588)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333334556778888888999999999999999999999999999999988887744 444444443332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 497 DAWCVFFWATTPTLFSLFTFGLFALMGHQLDA---------AMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTR 567 (1446)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~---------~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~ 567 (1446)
......+.... . +.++.++.+.+. +.+|. ..+|.++.+...+..|+..++..+..+.++.++.+||.+
T Consensus 250 ~~~~~~~~~~~-~-~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ 326 (588)
T PRK11174 250 SAVLEFFASIS-I-ALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVT 326 (588)
T ss_pred HHHHHHHHHHH-H-HHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222111 1 122233334333 33444 345666677788899999999999999999999999999
Q ss_pred HhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHH
Q 000521 568 FLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKS 647 (1446)
Q Consensus 568 fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKS 647 (1446)
+++.++.++.... ...+ ......++++|++|.|+++ +++|+|+||++++|++++|+||||||||
T Consensus 327 ~l~~~~~~~~~~~-~~~~----------~~~~~~i~~~~vsf~~~~~-----~~vL~~i~l~i~~G~~vaIvG~SGsGKS 390 (588)
T PRK11174 327 FLETPLAHPQQGE-KELA----------SNDPVTIEAEDLEILSPDG-----KTLAGPLNFTLPAGQRIALVGPSGAGKT 390 (588)
T ss_pred HHcCCCcccCCCc-cccC----------CCCCceEEEEeeEEeccCC-----CeeeeeeEEEEcCCCEEEEECCCCCCHH
Confidence 9976543211000 0000 0123469999999987632 2459999999999999999999999999
Q ss_pred HHHHHHhcCccCCCcEEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHh
Q 000521 648 SLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDIS 713 (1446)
Q Consensus 648 tll~~llg~~~~~~G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~ 713 (1446)
||+++|+|++ |++|+|.++| +|+||||+||||++||||||++|++ .++++++++++.|+++++++
T Consensus 391 TL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~ 469 (588)
T PRK11174 391 SLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLP 469 (588)
T ss_pred HHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHH
Confidence 9999999999 9999999987 5999999999999999999999965 89999999999999999999
Q ss_pred hccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchh
Q 000521 714 LMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI 793 (1446)
Q Consensus 714 ~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l 793 (1446)
.+|+|++|.+||+|.+|||||||||+||||++++|+|+||||||||||++++++|.+. +.. +.+++|+|+||||++.+
T Consensus 470 ~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~-l~~-~~~~~TvIiItHrl~~i 547 (588)
T PRK11174 470 LLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQA-LNA-ASRRQTTLMVTHQLEDL 547 (588)
T ss_pred hcccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHH-HhCCCEEEEEecChHHH
Confidence 9999999999999999999999999999999999999999999999999999999986 444 55789999999999999
Q ss_pred hhCCEEEEEeCCEEEEecChhHHHhccccCc
Q 000521 794 SAADMVVVMDKGQVKWIGSSADLAVSLYSGF 824 (1446)
Q Consensus 794 ~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~ 824 (1446)
+.||+|++|++|+|+++|+++|++++++.+.
T Consensus 548 ~~aD~Iivl~~G~i~e~G~~~eL~~~~~~y~ 578 (588)
T PRK11174 548 AQWDQIWVMQDGQIVQQGDYAELSQAGGLFA 578 (588)
T ss_pred HhCCEEEEEeCCeEeecCCHHHHHhcchHHH
Confidence 9999999999999999999999987655443
No 27
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.1e-70 Score=689.14 Aligned_cols=492 Identities=21% Similarity=0.285 Sum_probs=401.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHH
Q 000521 941 LCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANF 1020 (1446)
Q Consensus 941 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~ 1020 (1446)
+.++.++..++.++..+.....+.+...+++.++++++++.|+.+|++.++|++++|+++|++.+++.+...+..++..+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~ 145 (574)
T PRK11160 66 VRGAAIGRTAGRYGERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAAL 145 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455566677777777788889999999999999999999999999999999999999999999999888888888888
Q ss_pred HHHHHhhhhHHhHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHH
Q 000521 1021 VGLLGIAVVLSYVQVFFLLLLVPFWF-IYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAK 1099 (1446)
Q Consensus 1021 ~~~l~~~~~~~~~~~~~~~~~~pl~~-~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~ 1099 (1446)
+.+++.++++++.+|.+.++++..+. ++..+..++.+..+...+...++.+.+.+.+.|.++|+++||+||.|+++.++
T Consensus 146 ~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~ 225 (574)
T PRK11160 146 VVILVLTIGLSFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQ 225 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHH
Confidence 88777777777777776654432222 22222333344444444444556677888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000521 1100 FKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYA-APIVSLLGNFLSS 1178 (1446)
Q Consensus 1100 ~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~-~~~~~~l~~~i~~ 1178 (1446)
+.+..++..+..+.......+.....+++..+...++..+..... .+..+.|.+..++.|. ......+..+...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~-----~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~ 300 (574)
T PRK11160 226 LEQTEQQWLAAQRRQANLTGLSQALMILANGLTVVLMLWLAAGGV-----GGNAQPGALIALFVFAALAAFEALMPVAGA 300 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988888777666666555555544433222222211111 1233455544444443 3334566677778
Q ss_pred HHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCC
Q 000521 1179 FTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAG 1258 (1446)
Q Consensus 1179 ~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSG 1258 (1446)
+.+......+.+|+.++++.++|........ ..+..+.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||
T Consensus 301 ~~~~~~~~~s~~ri~~ll~~~~~~~~~~~~~--~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsG 378 (574)
T PRK11160 301 FQHLGQVIASARRINEITEQKPEVTFPTTST--AAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCG 378 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcccC--CCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCC
Confidence 8888999999999999998776532111111 12345789999999999765557999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCC-CCChHHHHHHHHHccHHHH
Q 000521 1259 KSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEE 1337 (1446)
Q Consensus 1259 KSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~-~~~d~ei~~aL~~~~L~~~ 1337 (1446)
||||+++|.|+++|++|+|.+||+|+++++.+++|++|++|||||++|+|||||||.++. +.+|+++++++++++++++
T Consensus 379 KSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~ 458 (574)
T PRK11160 379 KSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKL 458 (574)
T ss_pred HHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHH
Confidence 999999999999999999999999999999999999999999999999999999998765 4689999999999999999
Q ss_pred HHh-CCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHh
Q 000521 1338 VEA-VGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL 1416 (1446)
Q Consensus 1338 i~~-lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~ 1416 (1446)
+++ .||||.+||+|.+||||||||++||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.
T Consensus 459 i~~p~GldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~ 538 (574)
T PRK11160 459 LEDDKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLE 538 (574)
T ss_pred HcCccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHH
Confidence 885 4999999999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred hcCEEEEEeCCEEEEEeccchhh
Q 000521 1417 NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1417 ~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||+|++|++|+++|.|+...+.
T Consensus 539 ~~d~i~~l~~G~i~~~g~~~~l~ 561 (574)
T PRK11160 539 QFDRICVMDNGQIIEQGTHQELL 561 (574)
T ss_pred hCCEEEEEeCCeEEEeCCHHHHH
Confidence 99999999999999999987653
No 28
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.4e-69 Score=700.14 Aligned_cols=528 Identities=23% Similarity=0.319 Sum_probs=422.3
Q ss_pred HHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 000521 904 AILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPV 983 (1446)
Q Consensus 904 ~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~ 983 (1446)
.++........++.++...|..-..........+..+++++.++..++.+++.++....+.+...+++.++++++++.|+
T Consensus 148 s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 227 (694)
T TIGR01846 148 SLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTSRIDVELGARLYRHLLGLPL 227 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 33444444555666666555321111111222334455566666778888888999999999999999999999999999
Q ss_pred ccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 984 LFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELR 1063 (1446)
Q Consensus 984 ~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~ 1063 (1446)
+||++.++|++++|+ +|++.+.+.+...+...+..++.++..++++.+.+|.++++++..++++..+.....+..+...
T Consensus 228 ~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~ 306 (694)
T TIGR01846 228 GYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSLVCYALLSVFVGPILRKRV 306 (694)
T ss_pred HHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 6999999887766666655555555555566666776655443333333332222222222222
Q ss_pred HHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 000521 1064 RLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIG 1143 (1446)
Q Consensus 1064 ~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~ 1143 (1446)
+...+..+...+++.|+++|+.+||+||.|+.+.+++.+..++..+..+.....+.+.....+++..+...++.++....
T Consensus 307 ~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~l 386 (694)
T TIGR01846 307 EDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILLWFGAHL 386 (694)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 22334455677899999999999999999999999999999988888887777666666655555443222221111111
Q ss_pred hcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEEEE
Q 000521 1144 SRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQN 1223 (1446)
Q Consensus 1144 ~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~n 1223 (1446)
. ..+..+.|.+.....+...+..++..+...+.++++...+.+|+.++++.++|..... .....+..|.|+|+|
T Consensus 387 v----~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~--~~~~~~~~~~i~~~~ 460 (694)
T TIGR01846 387 V----IGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSAG--LAALPELRGAITFEN 460 (694)
T ss_pred H----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCC--CCCCCCCCCeEEEEE
Confidence 0 1245678888888889999999999999999999999999999999998877642211 111112357899999
Q ss_pred EEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCC
Q 000521 1224 VTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSP 1303 (1446)
Q Consensus 1224 Vs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp 1303 (1446)
|+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|++||+|+++++.+++|+++++|||||
T Consensus 461 vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~ 540 (694)
T TIGR01846 461 IRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQEN 540 (694)
T ss_pred EEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCC
Confidence 99999876667999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEecc
Q 000521 1304 FLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDEC 1380 (1446)
Q Consensus 1304 ~lF~gTIR~NLdp~~-~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEa 1380 (1446)
.+|+|||||||..++ ..+|++++++++.++++++++++ |+||.++++|.+||||||||++||||++++|+|||||||
T Consensus 541 ~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililDEp 620 (694)
T TIGR01846 541 VLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEA 620 (694)
T ss_pred eehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 999999999998865 46899999999999999999999 999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchh
Q 000521 1381 TANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1381 TS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
||+||++|++.+.+.|++..+++|+|+||||++++..||+|++|++|+++|.|++..+
T Consensus 621 ts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l 678 (694)
T TIGR01846 621 TSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEEL 678 (694)
T ss_pred CcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999998889999999999999999999999999999999987665
No 29
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-69 Score=627.96 Aligned_cols=487 Identities=22% Similarity=0.339 Sum_probs=408.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHH
Q 000521 944 FCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGL 1023 (1446)
Q Consensus 944 l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~ 1023 (1446)
+++...+..++....-.....+.-..+|.++|+++...+..-..+-..|+++||+..|++.+|+.+-..+...+..++..
T Consensus 67 ~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~ 146 (573)
T COG4987 67 LAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLI 146 (573)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHH
Confidence 44455555555555666677888889999999999999999999999999999999999999999999999998888888
Q ss_pred HHhhhhHHhHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHH
Q 000521 1024 LGIAVVLSYVQVFFLLLLVPF-WFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKE 1102 (1446)
Q Consensus 1024 l~~~~~~~~~~~~~~~~~~pl-~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~ 1102 (1446)
+++.+.+++.+|++++.+... ++....+...+.+..|...+.-...+..++++|.|.+.|....+.||.++.|.+.+.+
T Consensus 147 ~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~ 226 (573)
T COG4987 147 AVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEA 226 (573)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHH
Confidence 888888888877765544333 3333444445555566666666778889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 000521 1103 HVVLYQRTSYSELTASLWLSLRLQLLAAFIIS-FIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFL-SSFT 1180 (1446)
Q Consensus 1103 ~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i-~~~~ 1180 (1446)
..+.+.+...+...+..|-...+.++.++.+. .+...+.... .+..+...+.+++..++.....+.-+. ..+.
T Consensus 227 ~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~-----~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~ 301 (573)
T COG4987 227 TEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVG-----AGALAQPGAALALLVIFAALEAFEPLAPGAFQ 301 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-----CCCcchhHHHHHHHHHHHHHHHHhhhcchhHH
Confidence 99999999999999999999988888876554 3333332111 121221122222222233344444444 6668
Q ss_pred HHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCc-cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCH
Q 000521 1181 ETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQG-LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGK 1259 (1446)
Q Consensus 1181 ~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g-~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGK 1259 (1446)
++.+...|++|+.+..+.++|...+.. +-|..+ .++++||+|+|+.+.+++|+|+||++++||||||+|||||||
T Consensus 302 ~lgq~~~Sa~Rl~~i~~q~~e~~~~~~----~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGK 377 (573)
T COG4987 302 HLGQVIASARRLNDILDQKPEVTFPDE----QTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGK 377 (573)
T ss_pred HhhHHHHHHHHHhhhccCCcccCCCcc----ccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCH
Confidence 888999999999999988776532211 112222 799999999999888899999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCCC-CChHHHHHHHHHccHHHHH
Q 000521 1260 SSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEV 1338 (1446)
Q Consensus 1260 STLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i 1338 (1446)
||++++|.|.++|++|+|..+|.|++.++.+++|+.|++++|.+.+|+||+|+||...++ .||||+|++|+++||.+.+
T Consensus 378 STllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~ 457 (573)
T COG4987 378 STLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLL 457 (573)
T ss_pred HHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987654 6999999999999999999
Q ss_pred HhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHh
Q 000521 1339 EAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL 1416 (1446)
Q Consensus 1339 ~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~ 1416 (1446)
++. ||+|.+||+|.+||||||||++|||++|++.++++|||||.+||++||+.|.+.|.+..+|+|+|+||||+..+.
T Consensus 458 ~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le 537 (573)
T COG4987 458 ESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLE 537 (573)
T ss_pred HhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHh
Confidence 999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCEEEEEeCCEEEEEeccchhh
Q 000521 1417 NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1417 ~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
.||||+|||+|+++|.|++..+.
T Consensus 538 ~~drIivl~~Gkiie~G~~~~Ll 560 (573)
T COG4987 538 RMDRIIVLDNGKIIEEGTHAELL 560 (573)
T ss_pred hcCEEEEEECCeeeecCCHHhhh
Confidence 99999999999999999998653
No 30
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.4e-68 Score=681.79 Aligned_cols=533 Identities=24% Similarity=0.355 Sum_probs=422.5
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000521 902 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 981 (1446)
Q Consensus 902 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 981 (1446)
++.++........++.+....+..-..........++.+++++.++..++.+++.++....+.+....++..+++++++.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~ 104 (576)
T TIGR02204 25 VALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGERVVADIRRAVFAHLISL 104 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34445555555556666555443111111111222334444555555666777778888889999999999999999999
Q ss_pred CcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 982 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1061 (1446)
Q Consensus 982 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~ 1061 (1446)
|.++|++...|++++|+++|++.+++.+...+..++..++.+++.++++.+..|++.++++...++...+...+.+..+.
T Consensus 105 ~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~ 184 (576)
T TIGR02204 105 SPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLFGRRVRK 184 (576)
T ss_pred CHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888777777777777777777676666665544333333333333333333344
Q ss_pred HHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000521 1062 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1141 (1446)
Q Consensus 1062 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v 1141 (1446)
..+.....+....+++.|.++|+++||+|+.|+++.+++.+..+...+..........|+......+..+...++..+..
T Consensus 185 ~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 264 (576)
T TIGR02204 185 LSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLVFGAIVGVLWVGA 264 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444556667789999999999999999999999999999888877776666555555554444333222111111111
Q ss_pred HhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEE
Q 000521 1142 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1221 (1446)
Q Consensus 1142 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1221 (1446)
.. ...+..+.|.+..+..++..+..++..+...+.++.....+.+|+.++++.++|........+..+|..+.|+|
T Consensus 265 ~~----v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 340 (576)
T TIGR02204 265 HD----VIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHPKTLPVPLRGEIEF 340 (576)
T ss_pred HH----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCCccCCcCCCceEEE
Confidence 10 01244678888888889999999999999999999999999999999998765421111111122445578999
Q ss_pred EEEEEEecCCC-CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEe
Q 000521 1222 QNVTMRYKPSL-PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP 1300 (1446)
Q Consensus 1222 ~nVs~~Y~~~~-~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~Vp 1300 (1446)
+||+|+|+++. +++|+|+||+|+|||+++|+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++|+|
T Consensus 341 ~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~ 420 (576)
T TIGR02204 341 EQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVP 420 (576)
T ss_pred EEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEc
Confidence 99999997543 57999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000521 1301 QSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1377 (1446)
Q Consensus 1301 Qdp~lF~gTIR~NLdp~~-~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1377 (1446)
|||++|+|||||||.+++ ..+|++++++++++++.++++.+ |+||.++|+|.+||||||||++||||++++|+||+|
T Consensus 421 Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ilil 500 (576)
T TIGR02204 421 QDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLL 500 (576)
T ss_pred cCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEE
Confidence 999999999999999865 45889999999999999999998 999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchh
Q 000521 1378 DECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1378 DEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
|||||+||.+|++.+.+.+++..+++|+|+||||++.+..||+|++|++|+++|.|++..+
T Consensus 501 DEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l 561 (576)
T TIGR02204 501 DEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAEL 561 (576)
T ss_pred eCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHH
Confidence 9999999999999999999998889999999999999999999999999999999998765
No 31
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.3e-68 Score=674.48 Aligned_cols=515 Identities=22% Similarity=0.284 Sum_probs=407.6
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccC-CCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000521 902 LSAILMQASRNGNDLWLSYWVDTTG-SSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 980 (1446)
Q Consensus 902 ~~~~~~~~~~~~~~~wl~~w~~~~~-~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 980 (1446)
++.++..++....++.+++..+... ..........++++++++.++..++.+++.+.....+.+...+++.++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~ 89 (529)
T TIGR02857 10 LLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAVAA 89 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444555555566666666555321 111111223345556666777778888888888899999999999999999999
Q ss_pred CCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 981 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1060 (1446)
Q Consensus 981 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr 1060 (1446)
.|..+|++.++|++++|+++|++.+++.+...+..++..++..++.++++.+.+|+++++++....+...+...+.+..+
T Consensus 90 ~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~ 169 (529)
T TIGR02857 90 LGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWAAQ 169 (529)
T ss_pred CCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888777777766666666666666666665444333222222122222222222
Q ss_pred HHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH-HH
Q 000521 1061 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIA-TM 1139 (1446)
Q Consensus 1061 ~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~-~~ 1139 (1446)
...+......+.+.+++.|+++|+++||+|+.|+++.+++.+..++..+..........+.....+++..+...++. +.
T Consensus 170 ~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (529)
T TIGR02857 170 AAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAVYI 249 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233334445677899999999999999999999999999988888877766666666655555554443222211 11
Q ss_pred HHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccE
Q 000521 1140 AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLI 1219 (1446)
Q Consensus 1140 ~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I 1219 (1446)
..... .+..+.|.+..++.++..+..++..+...+.++.....+.+|+.++++.++++.... +...+..+.|
T Consensus 250 ~~~~~-----~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~---~~~~~~~~~i 321 (529)
T TIGR02857 250 GFRLL-----AGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA---PVTAAPAPSL 321 (529)
T ss_pred HHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---CCCCCCCCeE
Confidence 11111 234567877788888888999999999999999999999999999998654322111 1112234689
Q ss_pred EEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEE
Q 000521 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1446)
Q Consensus 1220 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1299 (1446)
+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++++||
T Consensus 322 ~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v 401 (529)
T TIGR02857 322 EFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWV 401 (529)
T ss_pred EEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEE
Confidence 99999999976555799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCcHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000521 1300 PQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1376 (1446)
Q Consensus 1300 pQdp~lF~gTIR~NLdp~~-~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1376 (1446)
||||++|+|||||||.++. ..+|++++++++.++++++++++ ||||.+||+|.+||||||||++||||++++|+|++
T Consensus 402 ~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ili 481 (529)
T TIGR02857 402 PQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLL 481 (529)
T ss_pred cCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998865 46889999999999999999999 99999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEE
Q 000521 1377 LDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILIL 1424 (1446)
Q Consensus 1377 LDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl 1424 (1446)
||||||+||++|++.|++.|++..+++|+|+||||+++++.||+|+||
T Consensus 482 lDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 482 LDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred EeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999888899999999999999999999986
No 32
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=5.2e-68 Score=676.38 Aligned_cols=530 Identities=23% Similarity=0.292 Sum_probs=416.1
Q ss_pred HHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000521 900 ICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIV 979 (1446)
Q Consensus 900 ~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl 979 (1446)
+++..++..++....++++....|.... ......++.+++++.++..+..+.......+...+...++..+++++++
T Consensus 24 ~~~~~i~~~~~~~~~~~~~~~iid~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ 100 (588)
T PRK13657 24 LAVANVLLAAATFAEPILFGRIIDAISG---KGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFERII 100 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555666667777766654221 1112222333333333333333333444444555555666779999999
Q ss_pred cCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 980 NAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTS 1059 (1446)
Q Consensus 980 ~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~s 1059 (1446)
+.|..+|++.+.|++++|+++|++.+.+.+...+..++..++..++.++++.+..|+++++++.+++++..+...+.+..
T Consensus 101 ~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~ 180 (588)
T PRK13657 101 QLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMRKT 180 (588)
T ss_pred hCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998877666666666665555566666666777666655555555555556666666
Q ss_pred HHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000521 1060 RELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATM 1139 (1446)
Q Consensus 1060 r~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 1139 (1446)
++..+...+..+.+.+++.|+++|+++||+||.++.+.+++.+..+...+........+.+.....+++..+...++.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (588)
T PRK13657 181 KDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAILVL 260 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666677888899999999999999999999999999998888887776665555555444443333222221111
Q ss_pred HHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccE
Q 000521 1140 AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLI 1219 (1446)
Q Consensus 1140 ~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I 1219 (1446)
..... ..+..+.|.+..++.++..+..++..+...+.++..+..+.+|+.++.+.+++........+. -+..+.|
T Consensus 261 g~~~v----~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~-~~~~~~I 335 (588)
T PRK13657 261 GAALV----QKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGAIDL-GRVKGAV 335 (588)
T ss_pred HHHHH----HcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCc-CCCCCeE
Confidence 11111 134567888888889999999999999999999999999999999998765442111111111 1234689
Q ss_pred EEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEE
Q 000521 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1446)
Q Consensus 1220 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1299 (1446)
+|+||+|+|+++ +++|+|+||+++|||++||+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++|+||
T Consensus 336 ~~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v 414 (588)
T PRK13657 336 EFDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVV 414 (588)
T ss_pred EEEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEE
Confidence 999999999743 5699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCcHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000521 1300 PQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1376 (1446)
Q Consensus 1300 pQdp~lF~gTIR~NLdp~~-~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1376 (1446)
||||.+|+|||||||..++ +.+|++++++++.++++++++++ |+||.++++|.+||||||||+|||||++++|+|||
T Consensus 415 ~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~ili 494 (588)
T PRK13657 415 FQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILI 494 (588)
T ss_pred ecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998875 46899999999999999999998 99999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchh
Q 000521 1377 LDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1377 LDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
||||||+||++|++.|.+.|++..+++|+|+||||+++++.||+|++|++|+++|.|++..+
T Consensus 495 LDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l 556 (588)
T PRK13657 495 LDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDEL 556 (588)
T ss_pred EeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999988789999999999999999999999999999999986554
No 33
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.7e-67 Score=682.75 Aligned_cols=537 Identities=21% Similarity=0.254 Sum_probs=443.4
Q ss_pred hHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 264 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 343 (1446)
Q Consensus 264 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~ 343 (1446)
.+++..++.+++.++...++.++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (686)
T TIGR03797 125 DLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLE 204 (686)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555566778888888999999999999999999999998764333344455666666777778888888888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhHhHHHHHHHH
Q 000521 344 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGL 421 (1446)
Q Consensus 344 ~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~ 421 (1446)
.++...+...+|+|.++++...+.+.+.|++++.++ |++.+.+.... +..+...++-++ ++++++..-++.+++.+
T Consensus 205 ~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l 282 (686)
T TIGR03797 205 TRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALL-NLGLMFYYSWKLALVAV 282 (686)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888899999999987 78888875532 233344444433 33333333334444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 422 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 501 (1446)
Q Consensus 422 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 501 (1446)
+++++.+.+..++.+.+.+..++.++..+++.+.+.|.++|+++||.+|.|+.+.+++++..++..+...+......+..
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (686)
T TIGR03797 283 ALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLT 362 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555556677888888899999999999999999999999999999999999988888876666666665555554443
Q ss_pred HHHHHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhh
Q 000521 502 FFWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 579 (1446)
Q Consensus 502 ~~~~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~ 579 (1446)
.+...... .+.++++|.|.+.++.+|.|.++++.+++..+..|+..++..+..+.+++++++|+.++++.++..+..
T Consensus 363 ~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~- 441 (686)
T TIGR03797 363 VFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA- 441 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC-
Confidence 33332222 233466788888888999999999999999999999999999999999999999999999765422110
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccC
Q 000521 580 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 659 (1446)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~ 659 (1446)
. ..+ ......++++|++|+|+.++ +++|+|+||+|++||.++|+|+||||||||+++|+|+++|
T Consensus 442 ~--~~~----------~~~~~~I~~~nvsf~Y~~~~----~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p 505 (686)
T TIGR03797 442 K--TDP----------GKLSGAIEVDRVTFRYRPDG----PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP 505 (686)
T ss_pred c--CCC----------CCCCceEEEEEEEEEcCCCC----ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 0 000 11234699999999996431 3469999999999999999999999999999999999999
Q ss_pred CCcEEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCC
Q 000521 660 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 726 (1446)
Q Consensus 660 ~~G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~ 726 (1446)
++|+|.++| +||||||+|++|++||||||.+|++.++++..++++.|+++++++.+|+|++|.+||+
T Consensus 506 ~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 506 ESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred CCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 999999987 5999999999999999999999988899999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCE
Q 000521 727 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 806 (1446)
Q Consensus 727 g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 806 (1446)
|.+|||||||||+||||++++|+|++||||||+||+++++++.+. +.. . ++|+|+||||++.++.||+|++|++|+
T Consensus 586 G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~-L~~-~--~~T~IiItHr~~~i~~~D~Iivl~~G~ 661 (686)
T TIGR03797 586 GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSES-LER-L--KVTRIVIAHRLSTIRNADRIYVLDAGR 661 (686)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHH-h--CCeEEEEecChHHHHcCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999987 333 2 589999999999999999999999999
Q ss_pred EEEecChhHHHhccccC
Q 000521 807 VKWIGSSADLAVSLYSG 823 (1446)
Q Consensus 807 i~~~g~~~~l~~~~~~~ 823 (1446)
|+++|+++|+.++++.+
T Consensus 662 iv~~G~~~~Ll~~~~~y 678 (686)
T TIGR03797 662 VVQQGTYDELMAREGLF 678 (686)
T ss_pred EEEECCHHHHHhCCcHH
Confidence 99999999998765444
No 34
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.5e-67 Score=684.23 Aligned_cols=544 Identities=20% Similarity=0.215 Sum_probs=445.8
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 266 VRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLK 345 (1446)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ 345 (1446)
++..++.+++.++..++..++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+++.+
T Consensus 145 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (710)
T TIGR03796 145 LWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIK 224 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445666777788888899999999999999999999876533333344556666667777888888888999999999
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHH
Q 000521 346 LRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAIT 424 (1446)
Q Consensus 346 ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v~ 424 (1446)
+...+...+|+|.++++...+.+.++|++++.++.| +.+.+... .+..+....+.+++.+++++..-++.+++.++.+
T Consensus 225 ~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~ 303 (710)
T TIGR03796 225 LAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFA 303 (710)
T ss_pred HHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988889999999999888 66776543 3444444444444444444443344444445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 425 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 504 (1446)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 504 (1446)
++.+.+..++.++..+..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++...++.+...+......+...+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (710)
T TIGR03796 304 AINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLP 383 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556677788888888899999999999999999999999999999999999999988888887776666555444333
Q ss_pred HHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhc
Q 000521 505 ATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 582 (1446)
Q Consensus 505 ~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 582 (1446)
..... .+.++++|+|.+.++.+|.|.++++.+++..+..|+..++..+..+.++.++++|+.++++.++..+.....
T Consensus 384 ~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~- 462 (710)
T TIGR03796 384 TLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEE- 462 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc-
Confidence 22222 234567888888889999999999999999999999999999999999999999999999765432211000
Q ss_pred CCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCc
Q 000521 583 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 662 (1446)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G 662 (1446)
.+. ............++++|++|+|+..+ +++|+|+||+|++||.++|+||||||||||+++|+|+++|++|
T Consensus 463 -~~~---~~~~~~~~~~~~I~~~~vsf~y~~~~----~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G 534 (710)
T TIGR03796 463 -APA---AGSEPSPRLSGYVELRNITFGYSPLE----PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSG 534 (710)
T ss_pred -ccc---cccccCCCCCCeEEEEEEEEecCCCC----CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc
Confidence 000 00000011235799999999997432 3469999999999999999999999999999999999999999
Q ss_pred EEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCC-CCChhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000521 663 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1446)
Q Consensus 663 ~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 728 (1446)
+|.++| +|+||||+|++|++||||||.++. +.+++++.++++.++++++++.+|+|++|.+||+|.
T Consensus 535 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~ 614 (710)
T TIGR03796 535 EILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGA 614 (710)
T ss_pred EEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCC
Confidence 999987 599999999999999999999875 478899999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEE
Q 000521 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1446)
Q Consensus 729 ~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1446)
+|||||||||+||||++++|+|+|||||||+||+++++++++.+ .. +++|+|+||||++.++.||+|++|++|+|+
T Consensus 615 ~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l-~~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~ 690 (710)
T TIGR03796 615 NLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNL-RR---RGCTCIIVAHRLSTIRDCDEIIVLERGKVV 690 (710)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHH-Hh---cCCEEEEEecCHHHHHhCCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999984 22 479999999999999999999999999999
Q ss_pred EecChhHHHhccccC
Q 000521 809 WIGSSADLAVSLYSG 823 (1446)
Q Consensus 809 ~~g~~~~l~~~~~~~ 823 (1446)
++|+++|+++..+.+
T Consensus 691 ~~G~~~~Ll~~~~~y 705 (710)
T TIGR03796 691 QRGTHEELWAVGGAY 705 (710)
T ss_pred EecCHHHHHHcCCcH
Confidence 999999998765544
No 35
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=7.6e-67 Score=677.48 Aligned_cols=535 Identities=21% Similarity=0.288 Sum_probs=444.7
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 265 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 344 (1446)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~ 344 (1446)
.++..++.+++.+....++.++..++.++.|++++.++|.+....+....+.++++++++.++..++.....+...+.+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (694)
T TIGR03375 137 WFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGK 216 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677888888888999999999999999999999987543333334445555666667778888888889999999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhHhHHHHHHHHH
Q 000521 345 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGLA 422 (1446)
Q Consensus 345 ~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~ 422 (1446)
++...+...+|+|.++++... .+.++|++++.+ .|++.+.+.... +..+...++-++..+++++ .-++.+++.++
T Consensus 217 ~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~l~li~l~ 293 (694)
T TIGR03375 217 KADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAI-IGGPLVWVPLV 293 (694)
T ss_pred HHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHH
Confidence 999999999999999999887 677899999998 799999986542 2334444444444333333 33334444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 423 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 502 (1446)
Q Consensus 423 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 502 (1446)
++++.+.+..++.++..+..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++..++..+...+..........
T Consensus 294 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (694)
T TIGR03375 294 AIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATN 373 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556667778889999999999999999999999999999999999999999999999888777777776666555443
Q ss_pred HHHHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhh
Q 000521 503 FWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 580 (1446)
Q Consensus 503 ~~~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~ 580 (1446)
+...... .+.++++|+|.+.++.+|+|.+++++.++..+..|+..++..+..+.+++++.+|+.++++.++..+....
T Consensus 374 ~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~ 453 (694)
T TIGR03375 374 FAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGTR 453 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 3333222 23356778888888899999999999999999999999999999999999999999999987543211000
Q ss_pred hcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000521 581 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 660 (1446)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~ 660 (1446)
... .......|+++|++|+|+.. + +++|+|+||+|++||.++|+|+||||||||+++|+|+++|+
T Consensus 454 ---~~~--------~~~~~~~I~~~~vsf~Y~~~-~---~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~ 518 (694)
T TIGR03375 454 ---FLH--------RPRLQGEIEFRNVSFAYPGQ-E---TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT 518 (694)
T ss_pred ---CCC--------CCCccceEEEEEEEEEeCCC-C---ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 000 01123579999999999642 1 34699999999999999999999999999999999999999
Q ss_pred CcEEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCC
Q 000521 661 HGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 726 (1446)
Q Consensus 661 ~G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~ 726 (1446)
+|+|.++| .|+||||+|++|++||+|||.++++ .+++++.++++.|+++++++.+|+|++|.+||+
T Consensus 519 ~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 519 EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred CceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 99999987 5999999999999999999999976 789999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCE
Q 000521 727 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 806 (1446)
Q Consensus 727 g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 806 (1446)
|.+||||||||++||||++++|++++||||||+||+++++++.+. +.. ..+++|+|+||||++.++.||+|++|++|+
T Consensus 599 G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~-l~~-~~~~~T~iiItHrl~~~~~~D~iivl~~G~ 676 (694)
T TIGR03375 599 GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDR-LKR-WLAGKTLVLVTHRTSLLDLVDRIIVMDNGR 676 (694)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHH-HhCCCEEEEEecCHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999887 443 456899999999999999999999999999
Q ss_pred EEEecChhHHHhc
Q 000521 807 VKWIGSSADLAVS 819 (1446)
Q Consensus 807 i~~~g~~~~l~~~ 819 (1446)
++++|+++|+++.
T Consensus 677 i~e~G~~~eLl~~ 689 (694)
T TIGR03375 677 IVADGPKDQVLEA 689 (694)
T ss_pred EEeeCCHHHHHHH
Confidence 9999999999764
No 36
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-70 Score=613.33 Aligned_cols=491 Identities=23% Similarity=0.387 Sum_probs=392.9
Q ss_pred HHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchH
Q 000521 937 YLVVLCIFCMFN------SFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLP 1010 (1446)
Q Consensus 937 ~l~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~ 1010 (1446)
....|..+.+++ +++.-+++++......-+.+.+--.+++++.+..+.|.-...+|+++.-..+..+.+. .+.
T Consensus 255 ~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~ 333 (790)
T KOG0056|consen 255 LVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLE 333 (790)
T ss_pred HHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeecccccceeehhccCcchhh-HHH
Confidence 344455544433 4566677777778888899999999999999999999999999998887766655554 222
Q ss_pred HHHHHHHHHHHHHHH-hhhhHHhHhHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhcchhHhHHHHhhcchH
Q 000521 1011 FILNILLANFVGLLG-IAVVLSYVQVFFLLLLVPFWFIYSKLQ----FFYRSTSRELRRLDSVSRSPIYASFTETLNGSS 1085 (1446)
Q Consensus 1011 ~~l~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~pl~~~~~~i~----~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~ 1085 (1446)
....++.-.+.-+.. .+.......+|+.+++..+..+|..+. .+--+..|.+...+.+++ +.-.+++-+..
T Consensus 334 yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesr----Ar~vDsllNFE 409 (790)
T KOG0056|consen 334 YVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESR----ARQVDSLLNFE 409 (790)
T ss_pred HHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhh----hhhhhhhhcch
Confidence 222222112222222 222223346777777766666554432 122223333333333433 45578999999
Q ss_pred HHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHH
Q 000521 1086 TIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYA 1165 (1446)
Q Consensus 1086 tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~ 1165 (1446)
|+|-|++|++..++|.+.++.+|+..++....-..+...-..+..+......++.++ .......+.|...+..+|.
T Consensus 410 TVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY----~Vt~q~ltVGDfVlf~TYl 485 (790)
T KOG0056|consen 410 TVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAY----RVTEQTLTVGDFVLFLTYL 485 (790)
T ss_pred hhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeee----eeeeccccccceehHHHHH
Confidence 999999999999999999999999988876655555554444433322222222221 1113445678888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeC
Q 000521 1166 APIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEG 1245 (1446)
Q Consensus 1166 ~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~ 1245 (1446)
+++..+++++-..+..++++..-.||+.++++.++|-.+.+..+|- --.+|.|+|+||+|.|+|+ +|||+||||+++|
T Consensus 486 iqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl-~~~~G~i~fsnvtF~Y~p~-k~vl~disF~v~p 563 (790)
T KOG0056|consen 486 IQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPGAPPL-KVTQGKIEFSNVTFAYDPG-KPVLSDISFTVQP 563 (790)
T ss_pred HHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCCCCCc-cccCCeEEEEEeEEecCCC-CceeecceEEecC
Confidence 9999999999999999999999999999999887775433322322 2357999999999999876 5799999999999
Q ss_pred CcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCCC-CChHH
Q 000521 1246 GTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLK 1324 (1446)
Q Consensus 1246 GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~-~~d~e 1324 (1446)
|+.+|+|||||+||||++++|+|++|.++|+|.|||+||+++..+.||++||+||||.+||++||..||.+... .+|||
T Consensus 564 GktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~Asnee 643 (790)
T KOG0056|consen 564 GKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEE 643 (790)
T ss_pred CcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998764 68999
Q ss_pred HHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCC
Q 000521 1325 IWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKG 1402 (1446)
Q Consensus 1325 i~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~ 1402 (1446)
+.+|.+.++++|.|-++ |++|.|||+|..||||||||+|+||++||+|.|++||||||+||..||+.||.++.+..++
T Consensus 644 vyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~ 723 (790)
T KOG0056|consen 644 VYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCAN 723 (790)
T ss_pred HHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcC
Confidence 99999999999999998 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchh
Q 000521 1403 MTVITIAHRISTVLNMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1403 ~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
+|.|+|||||+|+.++|.|+|+++|+|+|.|+-..+
T Consensus 724 RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeL 759 (790)
T KOG0056|consen 724 RTTIVVAHRLSTIVNADLILVISNGRIVERGRHEEL 759 (790)
T ss_pred CceEEEeeeehheecccEEEEEeCCeEeecCcHHHH
Confidence 999999999999999999999999999999987654
No 37
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.8e-66 Score=672.29 Aligned_cols=535 Identities=19% Similarity=0.191 Sum_probs=423.8
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 270 CCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSS 349 (1446)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~ 349 (1446)
.+.+++.++...++.++..++..+.|++++.++|.+.+..+.......+..++++.++..++.....+...+.+.++...
T Consensus 156 ~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 235 (711)
T TIGR00958 156 SGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLR 235 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456667777888999999999999999999998864322222222233334444555566655666667778888888
Q ss_pred HHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHH
Q 000521 350 IMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLI 428 (1446)
Q Consensus 350 L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v~~~~~ 428 (1446)
+...+|+|.++.+...+++.++|++.|.++.|++.+.+... .+..++...+.+++++++++..-...+++.++.+++..
T Consensus 236 lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~ 315 (711)
T TIGR00958 236 IREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVF 315 (711)
T ss_pred HHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 88999999999999888888999999999999999987553 45555555555554444333322222333333333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000521 429 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATT- 507 (1446)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~- 507 (1446)
.+..++.++..+..++..+..++..+...|.++|+++||.|++|+.+.+++++..++-.+...+.....+.........
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (711)
T TIGR00958 316 LAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLG 395 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777888888888899999999999999999999999999998887777665444443333333222222221111
Q ss_pred -HHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCC
Q 000521 508 -PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 586 (1446)
Q Consensus 508 -~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~ 586 (1446)
...+.++.+|.|.+.++.+|++.+++++.+...+..|+..++..+..+.++.++.+||.+|++.++..+.... ..+
T Consensus 396 ~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~- 472 (711)
T TIGR00958 396 MLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGT--LAP- 472 (711)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC--CCC-
Confidence 1223455677888888899999999999999999999999999999999999999999999976543221000 000
Q ss_pred cccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEE
Q 000521 587 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 666 (1446)
Q Consensus 587 ~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~ 666 (1446)
.+....|+++|++|+|+..++ +++|+|+||+|++||.++|+||||||||||+++|+|+++|++|+|.+
T Consensus 473 ---------~~~~~~I~~~nVsf~Y~~~~~---~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i 540 (711)
T TIGR00958 473 ---------LNLEGLIEFQDVSFSYPNRPD---VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLL 540 (711)
T ss_pred ---------CCCCCeEEEEEEEEECCCCCC---CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEE
Confidence 122356999999999975322 35699999999999999999999999999999999999999999999
Q ss_pred eC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 667 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 667 ~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
+| +|+||||+|++|++||||||.+|.+ .++++..++++.++++++++.+|+|++|.+||+|.+|||
T Consensus 541 dg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 620 (711)
T TIGR00958 541 DGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSG 620 (711)
T ss_pred CCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCH
Confidence 87 5999999999999999999999964 678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecC
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 812 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 812 (1446)
|||||++||||++++|+|+|||||||+||+++++.+.+. . ..+++|+|+||||++.++.||+|++|++|+|+++|+
T Consensus 621 GQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~~-~---~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt 696 (711)
T TIGR00958 621 GQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQES-R---SRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGT 696 (711)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHHh-h---ccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeC
Confidence 999999999999999999999999999999999998872 1 346899999999999999999999999999999999
Q ss_pred hhHHHhccccC
Q 000521 813 SADLAVSLYSG 823 (1446)
Q Consensus 813 ~~~l~~~~~~~ 823 (1446)
++|++++++.+
T Consensus 697 ~~eL~~~~~~y 707 (711)
T TIGR00958 697 HKQLMEDQGCY 707 (711)
T ss_pred HHHHHhCCCch
Confidence 99998765544
No 38
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2e-67 Score=666.70 Aligned_cols=496 Identities=21% Similarity=0.260 Sum_probs=397.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHH
Q 000521 936 FYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNI 1015 (1446)
Q Consensus 936 ~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~ 1015 (1446)
.|+++++++.++..++.++..+.....+.+...+++.++++++++.|+++|++.++|++++|+++|++.+.......+..
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~ 116 (569)
T PRK10789 37 MWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLT 116 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34455555555666666776777777889999999999999999999999999999999999999999998666555555
Q ss_pred HHHHHHHHHHhhhhH-HhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHH
Q 000521 1016 LLANFVGLLGIAVVL-SYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSED 1094 (1446)
Q Consensus 1016 ~~~~~~~~l~~~~~~-~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~ 1094 (1446)
++..++..++.++++ .+..|.+.++++..+.+...+.+.+.+..++..+......+.+.+.+.|+++|+++||+|++|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~ 196 (569)
T PRK10789 117 LVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLED 196 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccH
Confidence 555544444443333 3455544443333333333333334433333333444556778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHH
Q 000521 1095 YFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGN 1174 (1446)
Q Consensus 1095 ~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~ 1174 (1446)
.+.+++.+..++..+..+.......+..........+...++..+.... ...+..+.|.+..+..+...+..++..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~l----v~~g~lt~g~l~a~~~~~~~~~~pl~~ 272 (569)
T PRK10789 197 RQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWM----VVNGSLTLGQLTSFVMYLGLMIWPMLA 272 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHcCCcCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988887777666544444433333322221111111111110 012445788888888888889999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECC
Q 000521 1175 FLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGR 1254 (1446)
Q Consensus 1175 ~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGr 1254 (1446)
+...+.++.....+.+|+.++.+.++|........+ +..|.|+|+||+|+|+++.+++|+|+||+|+|||++||+|+
T Consensus 273 l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~~~~---~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~ 349 (569)
T PRK10789 273 LAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSEPVP---EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGP 349 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCC---CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECC
Confidence 999999999999999999999987654321111111 23568999999999986556799999999999999999999
Q ss_pred CCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCC-CCChHHHHHHHHHcc
Q 000521 1255 TGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCH 1333 (1446)
Q Consensus 1255 TGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~-~~~d~ei~~aL~~~~ 1333 (1446)
||||||||+++|.|+++|++|+|.+||+|+++++.+++|++++++||||++|+||+||||.++. ..+|++++++++.++
T Consensus 350 sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~ 429 (569)
T PRK10789 350 TGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLAS 429 (569)
T ss_pred CCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999999999999999998874 578999999999999
Q ss_pred HHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccC
Q 000521 1334 VKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHR 1411 (1446)
Q Consensus 1334 L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHr 1411 (1446)
+++++.++ |+||.+|++|.+||||||||++||||++++|+|||||||||+||+++++.+.+.|++..+++|+|+||||
T Consensus 430 l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~ 509 (569)
T PRK10789 430 VHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHR 509 (569)
T ss_pred CHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 99999988 9999999999999999999999999999999999999999999999999999999988789999999999
Q ss_pred chhHhhcCEEEEEeCCEEEEEeccchh
Q 000521 1412 ISTVLNMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1412 l~ti~~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
++++..||+|++|++|+++|.|++..+
T Consensus 510 ~~~~~~~d~i~~l~~G~i~~~g~~~~l 536 (569)
T PRK10789 510 LSALTEASEILVMQHGHIAQRGNHDQL 536 (569)
T ss_pred hhHHHcCCEEEEEeCCEEEEecCHHHH
Confidence 999999999999999999999987654
No 39
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.8e-67 Score=609.51 Aligned_cols=491 Identities=23% Similarity=0.354 Sum_probs=383.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHH
Q 000521 935 SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILN 1014 (1446)
Q Consensus 935 ~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~ 1014 (1446)
..-+..|.+..+...++..++.+.+.+...++-+....+.+++.+...+++|.+..+|.+.+.+.+-...|...+...+.
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~ 153 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVF 153 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHH
Confidence 34567888999999999999999999999999999999999999999999999999999888887777666665555444
Q ss_pred HHHHHHHHHHHhhhhHHh-HhHHHHHHHHHHHHHHHHHH---HHHH-HHHHHHHHHHHhhcchhHhHHHHhhcchHHHhh
Q 000521 1015 ILLANFVGLLGIAVVLSY-VQVFFLLLLVPFWFIYSKLQ---FFYR-STSRELRRLDSVSRSPIYASFTETLNGSSTIRA 1089 (1446)
Q Consensus 1015 ~~~~~~~~~l~~~~~~~~-~~~~~~~~~~pl~~~~~~i~---~~y~-~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIra 1089 (1446)
.++..++.+......+.+ ..+.++++.......|..+. ..++ +--++..+. ....-....|++.+-.+||+
T Consensus 154 ~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~A----dn~as~~~~dsL~Nye~VKs 229 (591)
T KOG0057|consen 154 NIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNA----DNSASRRAYDSLINYEIVKS 229 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhh----hhHHHHHHHHHHhhHHHHHH
Confidence 444433333222222222 23333333333333332211 1111 111222222 22233567799999999999
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHH
Q 000521 1090 FKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIV 1169 (1446)
Q Consensus 1090 f~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~ 1169 (1446)
||.|++..++|...+..+.+......+....+.+.-..+.+.... .+.+.+..+ ...+..+.|......+...++.
T Consensus 230 fNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~---~im~l~~~g-i~~~~mtvgdlv~~n~l~~qL~ 305 (591)
T KOG0057|consen 230 FNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALT---FIMVLGSNG-IAAGKMTVGDLVMVNSLLFQLS 305 (591)
T ss_pred cccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHH---HHHHHHhhh-hhhccccccchhhHHHHHHHHH
Confidence 999999999999999999888766554444433333333222222 222222222 2234556777777788888888
Q ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEE
Q 000521 1170 SLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQV 1249 (1446)
Q Consensus 1170 ~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~Gekv 1249 (1446)
.+++.+-..+.++-.++.-.+-++...+... ..... +.+.-+..|.|+|+||+|+|.|+ +++|+|+||+|++||||
T Consensus 306 ~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~--~i~~~-~~~i~~~~~~I~F~dV~f~y~~k-~~iL~gvsf~I~kGekV 381 (591)
T KOG0057|consen 306 LPLNFLGSVYRELRQALTDMRTLFILLEVDE--DIQEA-ALPIELFGGSIEFDDVHFSYGPK-RKVLKGVSFTIPKGEKV 381 (591)
T ss_pred hHHHHHHHHHHHHHHHHHhHHHHHhhhhhhh--hhhhc-cCCcccCCCcEEEEeeEEEeCCC-CceecceeEEecCCCEE
Confidence 8999998888888887777766654432111 11111 22223446789999999999865 56999999999999999
Q ss_pred EEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCCC-CChHHHHHH
Q 000521 1250 GIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSV 1328 (1446)
Q Consensus 1250 gIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~-~~d~ei~~a 1328 (1446)
||||+|||||||++++|+|+++ ++|+|+|||+||++++++.+|+.||+||||..||++||-+||.+++. .+|||+.++
T Consensus 382 aIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~ 460 (591)
T KOG0057|consen 382 AIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEA 460 (591)
T ss_pred EEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHH
Confidence 9999999999999999999999 99999999999999999999999999999999999999999998875 599999999
Q ss_pred HHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEE
Q 000521 1329 LEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVI 1406 (1446)
Q Consensus 1329 L~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI 1406 (1446)
+++++++|.+.++ |++|.|||+|..||||||||++||||+||+|+|+++|||||+||.+||+.|.+.|++...|+|+|
T Consensus 461 ~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI 540 (591)
T KOG0057|consen 461 CKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVI 540 (591)
T ss_pred HHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEE
Confidence 9999999999999 99999999999999999999999999999999999999999999999999999999988999999
Q ss_pred EeccCchhHhhcCEEEEEeCCEEEEEeccchh
Q 000521 1407 TIAHRISTVLNMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1407 ~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
+|+||++++++||+|++||+|+|+|.|+-..+
T Consensus 541 ~IvH~l~ll~~~DkI~~l~nG~v~e~gth~el 572 (591)
T KOG0057|consen 541 MIVHRLDLLKDFDKIIVLDNGTVKEYGTHSEL 572 (591)
T ss_pred EEEecchhHhcCCEEEEEECCeeEEeccHHHH
Confidence 99999999999999999999999999986543
No 40
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2e-66 Score=658.50 Aligned_cols=528 Identities=21% Similarity=0.275 Sum_probs=411.9
Q ss_pred HHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000521 901 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 980 (1446)
Q Consensus 901 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 980 (1446)
+++.++..++....++.+++..+..... .....++..+++..++..+..++..........+...++++++++++++
T Consensus 25 ~~~~~~~~~~~~~~p~~~~~iid~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~ 101 (585)
T TIGR01192 25 VIANITLAAITIAEPILFGRIIDAISSK---SDVLPTLALWAGFGVFNTIAYVLVAREADRLAHGRRATLLTEAFGRIIS 101 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3445555566666677666666532111 1111222222233333333334444444455555666677799999999
Q ss_pred CCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 981 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1060 (1446)
Q Consensus 981 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr 1060 (1446)
.|++||+++++|++++|+++|++.+...+...+...+..++.+++.++++.+.+|.+.++++.+.+++..+.+.+.+..+
T Consensus 102 l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~ 181 (585)
T TIGR01192 102 MPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGILYILIAKLVMQRTK 181 (585)
T ss_pred CCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998877777766666666666666666667777666555555555555556666666
Q ss_pred HHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000521 1061 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA 1140 (1446)
Q Consensus 1061 ~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 1140 (1446)
+..+......+.+.+++.|+++|++|||+||.++.+.+++.+..++..+..+.......+......++..+...++..+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g 261 (585)
T TIGR01192 182 NGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMASTISMMCILVIG 261 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666777888999999999999999999999999999888877776655444333333322222222111111111
Q ss_pred HHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCC-CCCccE
Q 000521 1141 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDW-PFQGLI 1219 (1446)
Q Consensus 1141 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~w-p~~g~I 1219 (1446)
... ...+..+.|.+..++.++..+..++..+...+.++.....+.+|+.++.+.+++...... + ..+ +..+.|
T Consensus 262 ~~~----v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-~-~~~~~~~~~i 335 (585)
T TIGR01192 262 TVL----VIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPAD-A-PELPNVKGAV 335 (585)
T ss_pred HHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcc-C-CCCCCCCCeE
Confidence 110 012446788888888888889999999999999999999999999999876554321111 1 112 235689
Q ss_pred EEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEE
Q 000521 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1446)
Q Consensus 1220 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1299 (1446)
+|+||+|+|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+|+.+++.+++|+++++|
T Consensus 336 ~~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v 414 (585)
T TIGR01192 336 EFRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATV 414 (585)
T ss_pred EEEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEE
Confidence 999999999753 4689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCCcHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000521 1300 PQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1376 (1446)
Q Consensus 1300 pQdp~lF~gTIR~NLdp~~-~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1376 (1446)
||||.+|++|+||||.++. ..+|++++++++.+++++++.++ |+||.++++|.+||||||||++||||++++|+|||
T Consensus 415 ~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ili 494 (585)
T TIGR01192 415 FQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAPILV 494 (585)
T ss_pred ccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998874 46889999999999999999888 99999999999999999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchh
Q 000521 1377 LDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1377 LDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
||||||+||.+|++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+...+
T Consensus 495 lDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 556 (585)
T TIGR01192 495 LDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQEL 556 (585)
T ss_pred EECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999988889999999999999999999999999999999987655
No 41
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=8e-66 Score=669.40 Aligned_cols=535 Identities=21% Similarity=0.244 Sum_probs=434.3
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 268 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 347 (1446)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir 347 (1446)
..++.+++.++...+..++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+++.++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (708)
T TIGR01193 149 PLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQRLS 228 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556777788888889999999999999999999987643333333445555666677778888888888999999999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHH
Q 000521 348 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-F-HDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 425 (1446)
Q Consensus 348 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~-~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v~~ 425 (1446)
..+...+|+|.++++...+++.+.|++++.++ |.+.+.+.... + ..+...++.++..+++++.... .+++.+++++
T Consensus 229 ~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-l~li~l~~~~ 306 (708)
T TIGR01193 229 IDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNML-LFLLSLLSIP 306 (708)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-HHHHHHHHHH
Confidence 99999999999999999988899999999998 99998875432 2 2233444444333333333322 2333333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 426 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 505 (1446)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 505 (1446)
+.+.+..++.++.++..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++...+..+...+..........+..
T Consensus 307 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (708)
T TIGR01193 307 VYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIKA 386 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455677788888999999999999999999999999999999999999888877765555555444444333332222
Q ss_pred HHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcC
Q 000521 506 TTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 583 (1446)
Q Consensus 506 ~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 583 (1446)
... ..+.++++|+|.+.++.+|+|.++++.++...+..|+..+...+..+.+++++.+|+.++++.++..+.....
T Consensus 387 ~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~~-- 464 (708)
T TIGR01193 387 VTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKKKR-- 464 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc--
Confidence 221 2234567888988899999999999999999999999999999999999999999999999765432211000
Q ss_pred CCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcE
Q 000521 584 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 663 (1446)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~ 663 (1446)
.+ .......|+++|++|+|+.+ +++|+|+||+|++|+.++|+||||||||||+++|+|+++|++|+
T Consensus 465 ~~---------~~~~~~~I~~~~vsf~y~~~-----~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~ 530 (708)
T TIGR01193 465 TE---------LNNLNGDIVINDVSYSYGYG-----SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGE 530 (708)
T ss_pred cC---------CCCCCCcEEEEEEEEEcCCC-----CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcE
Confidence 00 01223579999999999632 24699999999999999999999999999999999999999999
Q ss_pred EEEeC-------------eEEEEcCCCCCCCccHHHHHhcCC--CCChhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000521 664 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1446)
Q Consensus 664 i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~--~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 728 (1446)
|.++| +|+||||+|++|++||||||.+|. +.++++..++++.++++++++.+|+|++|.+||+|.
T Consensus 531 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~ 610 (708)
T TIGR01193 531 ILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGS 610 (708)
T ss_pred EEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCC
Confidence 99987 599999999999999999999983 467889999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEE
Q 000521 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1446)
Q Consensus 729 ~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1446)
+|||||||||+||||++++|+|+|||||||+||+++++++.+.+ .. . +++|+|+||||++.+..||+|++|++|+++
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L-~~-~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~ 687 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNL-LN-L-QDKTIIFVAHRLSVAKQSDKIIVLDHGKII 687 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHH-HH-h-cCCEEEEEecchHHHHcCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999874 33 3 689999999999999999999999999999
Q ss_pred EecChhHHHhccccC
Q 000521 809 WIGSSADLAVSLYSG 823 (1446)
Q Consensus 809 ~~g~~~~l~~~~~~~ 823 (1446)
+.|+++|+++..+.+
T Consensus 688 ~~G~~~~L~~~~~~y 702 (708)
T TIGR01193 688 EQGSHDELLDRNGFY 702 (708)
T ss_pred EECCHHHHHhcCCcH
Confidence 999999998765544
No 42
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.4e-65 Score=645.55 Aligned_cols=523 Identities=19% Similarity=0.205 Sum_probs=401.7
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000521 902 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 981 (1446)
Q Consensus 902 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 981 (1446)
++.++........++.++...|..-..........++.+++++.++..++.+++.++....+.+...+++.++++++++.
T Consensus 13 ~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~ 92 (544)
T TIGR01842 13 LFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASFSA 92 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 33444455555566666665553211111112223444555566667777888888888899999999999999999999
Q ss_pred CcccccCCChhHHHHHHHchhhhhccchHH-HHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 982 PVLFFDQTPGGRILNRFSSDLYMIDDSLPF-ILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1060 (1446)
Q Consensus 982 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~-~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr 1060 (1446)
|+.. .+...+++++|++.+.+.+.. .+..++..++.++.. +++.+..|++.++++...++...+.....+..+
T Consensus 93 ~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~~~ 166 (544)
T TIGR01842 93 TLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYL-LVCFLLHPWIGILALGGAVVLVGLALLNNRATK 166 (544)
T ss_pred cccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 9842 356789999999999876655 344444444433333 345555665544333222222223223333323
Q ss_pred HHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000521 1061 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA 1140 (1446)
Q Consensus 1061 ~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 1140 (1446)
...+...+..+...+++.|+++|+++||+||.|+.+.+++.+..++..+..+.......+......++..+...++..+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 246 (544)
T TIGR01842 167 KPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLGLG 246 (544)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333445566677899999999999999999999999999988887776665544443333333333222111111111
Q ss_pred HHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEE
Q 000521 1141 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIE 1220 (1446)
Q Consensus 1141 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~ 1220 (1446)
... ...+..++|.+..++.++..+..++..+...+.++.....+.+|+.++++.++|+... ... -+..+.|+
T Consensus 247 ~~l----~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-~~~---~~~~~~i~ 318 (544)
T TIGR01842 247 AYL----AIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA-MPL---PEPEGHLS 318 (544)
T ss_pred HHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC-CCC---CCCCCeEE
Confidence 110 0134567888888899999999999999999999999999999999999876653211 111 12356899
Q ss_pred EEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEe
Q 000521 1221 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP 1300 (1446)
Q Consensus 1221 f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~Vp 1300 (1446)
++||+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||+|+.+++.+.+|+++++||
T Consensus 319 ~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~ 398 (544)
T TIGR01842 319 VENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLP 398 (544)
T ss_pred EEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEec
Confidence 99999999765567999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000521 1301 QSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1377 (1446)
Q Consensus 1301 Qdp~lF~gTIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1377 (1446)
|||++|++|+|||+.++++ .+|++++++++.++++++++++ |+||.++|+|.+||||||||++||||++++|+||||
T Consensus 399 q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ilil 478 (544)
T TIGR01842 399 QDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVL 478 (544)
T ss_pred CCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999999999999986654 7899999999999999999999 999999999999999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchh
Q 000521 1378 DECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1378 DEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
|||||+||.+|++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|++..+
T Consensus 479 DEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l 540 (544)
T TIGR01842 479 DEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEV 540 (544)
T ss_pred eCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHH
Confidence 99999999999999999998875 68999999999999999999999999999999998754
No 43
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=7.8e-65 Score=647.85 Aligned_cols=538 Identities=18% Similarity=0.202 Sum_probs=430.0
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 268 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 347 (1446)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir 347 (1446)
..++.+++.++..++..++..++..+.|++++.+++.+..+........++.+++++.++..++.....+...+++.++.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 97 (582)
T PRK11176 18 PTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKVV 97 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556677777777777777778888999999999876542222222223333444556666766677777888999999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHH
Q 000521 348 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITIL 426 (1446)
Q Consensus 348 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v~~~ 426 (1446)
..+...+|+|.++++.....+.+.|++++.++.|++.+.+.. ..+..++..++.+++.+.+++..-++.+++.++++++
T Consensus 98 ~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l 177 (582)
T PRK11176 98 MTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAPI 177 (582)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998888999999999999999998754 3455566666666555544444333333334444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 427 LIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWAT 506 (1446)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~ 506 (1446)
.+.+..++.+++++..++.++..++..+...|.++|+++||.+|+|+.+.+++++.-++-.+...+..........+...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (582)
T PRK11176 178 VSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQL 257 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556677888888888999999999999999999999999999999888888776554444444444333333222222
Q ss_pred HH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCC
Q 000521 507 TP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANS 584 (1446)
Q Consensus 507 ~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~ 584 (1446)
.. ..+.++.++.|.+.++.++++.+.++++++..+..|+..+...+..+.+++.+++|+.++++.++..+....
T Consensus 258 ~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~---- 333 (582)
T PRK11176 258 IASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKR---- 333 (582)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCc----
Confidence 21 223345667777777899999999999999999999999999999999999999999999976543211000
Q ss_pred CCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEE
Q 000521 585 PSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSI 664 (1446)
Q Consensus 585 ~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i 664 (1446)
. .+.....++++|++|+|++.+ +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|
T Consensus 334 ~---------~~~~~~~i~~~~vsf~y~~~~----~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I 400 (582)
T PRK11176 334 V---------IERAKGDIEFRNVTFTYPGKE----VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEI 400 (582)
T ss_pred C---------CCCCCCeEEEEEEEEecCCCC----CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceE
Confidence 0 011234699999999996431 346999999999999999999999999999999999999999999
Q ss_pred EEeC-------------eEEEEcCCCCCCCccHHHHHhcCCC--CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000521 665 HASG-------------SIAYVPQVPWILSGTIRDNILFGKN--YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 729 (1446)
Q Consensus 665 ~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~--~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~ 729 (1446)
.++| .|+||||+|++|++||||||.+|++ +++++++++++.++++++++.+|+|++|.+|++|.+
T Consensus 401 ~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~ 480 (582)
T PRK11176 401 LLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVL 480 (582)
T ss_pred EECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCc
Confidence 9987 5899999999999999999999853 788999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEE
Q 000521 730 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKW 809 (1446)
Q Consensus 730 LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~ 809 (1446)
||||||||++||||+|++|+|++|||||||||+++++.+++. +.. +.+++|+|+||||++.++.||+|++|++|++++
T Consensus 481 LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~-l~~-~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e 558 (582)
T PRK11176 481 LSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAA-LDE-LQKNRTSLVIAHRLSTIEKADEILVVEDGEIVE 558 (582)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999887 433 446799999999999999999999999999999
Q ss_pred ecChhHHHhccccCc
Q 000521 810 IGSSADLAVSLYSGF 824 (1446)
Q Consensus 810 ~g~~~~l~~~~~~~~ 824 (1446)
.|+++++++..+.+.
T Consensus 559 ~g~~~~l~~~~~~y~ 573 (582)
T PRK11176 559 RGTHAELLAQNGVYA 573 (582)
T ss_pred eCCHHHHHhCCChHH
Confidence 999999987665443
No 44
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.5e-64 Score=644.47 Aligned_cols=535 Identities=20% Similarity=0.229 Sum_probs=438.3
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 267 RAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 346 (1446)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~i 346 (1446)
..+++.+++.++...++.++..++...+|++++.+++...........+.+++.++++.++..++.....+...+.+.++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 85 (571)
T TIGR02203 6 WSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKV 85 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566678888888899999999999999999999986544332223333344455566667777777778888999999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHH
Q 000521 347 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 425 (1446)
Q Consensus 347 r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v~~ 425 (1446)
...+...+|+|.++.+.....+.+.|++.+.++.|++++.+... .+..++...+.+++++.+++..-.+.+++.+++++
T Consensus 86 ~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~ 165 (571)
T TIGR02203 86 VRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLP 165 (571)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999999999888888999999999999999987654 45555555555554444443333333344444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 426 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 505 (1446)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 505 (1446)
+.+.+..++.++.++..++..+..+++.+.++|.++|+++||.++.|+.+.+++++..++..+...+..........+..
T Consensus 166 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (571)
T TIGR02203 166 VLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQ 245 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566778888888999999999999999999999999999999999998888888766666655554444444333322
Q ss_pred HHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcC
Q 000521 506 TTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 583 (1446)
Q Consensus 506 ~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~ 583 (1446)
.... .+.++.+|.+.+.++.+|++.+++++.++..+..|+..+...+..+.+++++++|+.++++.++..+...
T Consensus 246 ~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~---- 321 (571)
T TIGR02203 246 LIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGT---- 321 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC----
Confidence 2222 2345667778888889999999999999999999999999999999999999999999997654322100
Q ss_pred CCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcE
Q 000521 584 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 663 (1446)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~ 663 (1446)
.+. +..+..++++|++|+|++.+ +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+
T Consensus 322 ~~~---------~~~~~~i~~~~v~f~y~~~~----~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~ 388 (571)
T TIGR02203 322 RAI---------ERARGDVEFRNVTFRYPGRD----RPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQ 388 (571)
T ss_pred CCC---------CCCCCeEEEEEEEEEcCCCC----CccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCe
Confidence 000 11234699999999996432 34699999999999999999999999999999999999999999
Q ss_pred EEEeC-------------eEEEEcCCCCCCCccHHHHHhcCC--CCChhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000521 664 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1446)
Q Consensus 664 i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~--~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 728 (1446)
|.++| .|+||||+|++|++|+||||.++. +.++++.+++++.|++++++..+|+|.+|.+|++|.
T Consensus 389 I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~ 468 (571)
T TIGR02203 389 ILLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGV 468 (571)
T ss_pred EEECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCC
Confidence 99987 499999999999999999999985 488999999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEE
Q 000521 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1446)
Q Consensus 729 ~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1446)
+||||||||++||||++++|+|++||||||+||+++++++.+. +.. ..+++|+|+|||+.+.+..||+|++|++|+++
T Consensus 469 ~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~-L~~-~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~ 546 (571)
T TIGR02203 469 LLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAA-LER-LMQGRTTLVIAHRLSTIEKADRIVVMDDGRIV 546 (571)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHH-HhCCCEEEEEehhhHHHHhCCEEEEEeCCEEE
Confidence 9999999999999999999999999999999999999999887 433 45689999999999999999999999999999
Q ss_pred EecChhHHHhcc
Q 000521 809 WIGSSADLAVSL 820 (1446)
Q Consensus 809 ~~g~~~~l~~~~ 820 (1446)
+.|+++++.+..
T Consensus 547 ~~g~~~~l~~~~ 558 (571)
T TIGR02203 547 ERGTHNELLARN 558 (571)
T ss_pred eeCCHHHHHHcC
Confidence 999999997653
No 45
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.1e-66 Score=618.96 Aligned_cols=463 Identities=26% Similarity=0.368 Sum_probs=346.9
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCC----CcEEEEeC--------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT----HGSIHASG-------- 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~----~G~i~~~~-------- 668 (1446)
.++++|.+..|.... .+ ..+++||||++.+||.++|||.|||||||+.++|+|..++. +|+|.++|
T Consensus 5 lL~V~nL~v~~~~~~-~~-~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~ 82 (539)
T COG1123 5 LLEVENLTVEFATDG-GR-VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSE 82 (539)
T ss_pred eEEEeceEEEEecCC-cc-eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCH
Confidence 578899998887652 22 35799999999999999999999999999999999999987 89998876
Q ss_pred ---------eEEEEcCCCC-CCCc--cHHHHHh----cCCCC----ChhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000521 669 ---------SIAYVPQVPW-ILSG--TIRDNIL----FGKNY----DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1446)
Q Consensus 669 ---------~i~yv~Q~p~-l~~~--ti~~nI~----~g~~~----~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 728 (1446)
.|||++|+|+ .+|. ||.+-|. ..... ..++..+.++..+|.+.... .....
T Consensus 83 ~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPh 153 (539)
T COG1123 83 REMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPH 153 (539)
T ss_pred HHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCc
Confidence 4999999996 5554 7776664 22222 12334445555666443221 45677
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEE
Q 000521 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 807 (1446)
Q Consensus 729 ~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i 807 (1446)
.|||||||||.||+||..+|+++|+||||+|||+.++.+|++.+.......|.++|+|||++..+.+ ||+|+||.+|++
T Consensus 154 eLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~i 233 (539)
T COG1123 154 QLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEI 233 (539)
T ss_pred ccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEE
Confidence 9999999999999999999999999999999999999999986332223457799999999999876 999999999999
Q ss_pred EEecChhHHHhccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcCcchhHhHHH
Q 000521 808 KWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKN 887 (1446)
Q Consensus 808 ~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~ 887 (1446)
+|.|+.+++..+...-
T Consensus 234 VE~G~~~~i~~~p~hp---------------------------------------------------------------- 249 (539)
T COG1123 234 VETGPTEEILSNPQHP---------------------------------------------------------------- 249 (539)
T ss_pred EEecCHHHHHhccCCc----------------------------------------------------------------
Confidence 9999999886432100
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 888 YAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAA 967 (1446)
Q Consensus 888 y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 967 (1446)
|-+. + |.. .+....
T Consensus 250 YT~~----------L------------------l~a-----~p~~~~--------------------------------- 263 (539)
T COG1123 250 YTRG----------L------------------LAA-----VPRLGD--------------------------------- 263 (539)
T ss_pred ccHH----------H------------------Hhh-----CCCccc---------------------------------
Confidence 0000 0 000 000000
Q ss_pred HHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHH
Q 000521 968 VKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFI 1047 (1446)
Q Consensus 968 ~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~ 1047 (1446)
T Consensus 264 -------------------------------------------------------------------------------- 263 (539)
T COG1123 264 -------------------------------------------------------------------------------- 263 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 000521 1048 YSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQL 1127 (1446)
Q Consensus 1048 ~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~ 1127 (1446)
T Consensus 264 -------------------------------------------------------------------------------- 263 (539)
T COG1123 264 -------------------------------------------------------------------------------- 263 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCC
Q 000521 1128 LAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQ 1207 (1446)
Q Consensus 1128 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~ 1207 (1446)
. ... ..+.+
T Consensus 264 -------------------~-~~~---------------------------------------------~~~~~------ 272 (539)
T COG1123 264 -------------------E-KII---------------------------------------------RLPRR------ 272 (539)
T ss_pred -------------------c-ccc---------------------------------------------ccccc------
Confidence 0 000 00000
Q ss_pred CCCCCCCCCccEEEEEEEEEecCC---------CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Q 000521 1208 SLSPDWPFQGLIEFQNVTMRYKPS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1278 (1446)
Q Consensus 1208 ~~~~~wp~~g~I~f~nVs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ 1278 (1446)
.+. +....++++|++.+|... ...+++||||++++||.+||||.||||||||.++|+|+++|++|+|.
T Consensus 273 ~~~---~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~ 349 (539)
T COG1123 273 GPL---RAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSII 349 (539)
T ss_pred ccc---ccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE
Confidence 000 012358899999999741 24689999999999999999999999999999999999999999999
Q ss_pred EcCee--CCCCChHhHhcceEEEeCCCCC--C-CCcHHHhcC-CCCCCChHHHHHHHHHccHHHHHHhCCCch-hhhcCC
Q 000521 1279 VDGLN--IINTPVRDLRGRFAVVPQSPFL--F-EGSLRDNLD-PFHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESG 1351 (1446)
Q Consensus 1279 IDG~d--i~~i~~~~lR~~i~~VpQdp~l--F-~gTIR~NLd-p~~~~~d~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G 1351 (1446)
+||.| .+.-....+|+++-+|.|||+- - ..||+++|. |...+.... .+-.+..+.+.++..||.. ......
T Consensus 350 ~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~--~~~~~~rv~~ll~~VgL~~~~l~ryP 427 (539)
T COG1123 350 FDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGS--GAERRARVAELLELVGLPPEFLDRYP 427 (539)
T ss_pred EeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccc--hHHHHHHHHHHHHHcCCCHHHHhcCc
Confidence 99977 3333455688899999999973 3 259999984 322111100 0111112222233335665 355667
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCE
Q 000521 1352 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGH 1428 (1446)
Q Consensus 1352 ~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ 1428 (1446)
..||||||||+||||||..+|++||+|||||+||+-+...|.+.|.+.-+ +.|.|+|||+++.++. ||||+||++|+
T Consensus 428 ~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~ 507 (539)
T COG1123 428 HELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGR 507 (539)
T ss_pred hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCe
Confidence 78999999999999999999999999999999999999999998876543 7999999999999986 99999999999
Q ss_pred EEEEeccchhhh
Q 000521 1429 LVCISFICRYFI 1440 (1446)
Q Consensus 1429 vvE~~~~~~~~~ 1440 (1446)
|||.|.....|.
T Consensus 508 iVE~G~~~~v~~ 519 (539)
T COG1123 508 IVEEGPTEKVFE 519 (539)
T ss_pred EEEeCCHHHHhc
Confidence 999997766654
No 46
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.1e-63 Score=637.73 Aligned_cols=532 Identities=19% Similarity=0.230 Sum_probs=415.9
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 268 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLD--GYVLAIALGLTSILKSFFDTQYSFHLSKLKLK 345 (1446)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~--g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ 345 (1446)
...+.+++.++...++.++..++..+.|+++..++|.+..+.+... ...+++++++..++..++.....+...+.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (592)
T PRK10790 16 AYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVG 95 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777778888899999999999999999997654222111 12223334445556667777777888899999
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHH-H--HhhHhHHHHHHHH
Q 000521 346 LRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALY-L--LYTQVKFAFVSGL 421 (1446)
Q Consensus 346 ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~pl~i~i~~~-l--L~~~lg~a~l~~~ 421 (1446)
+...+...+|+|.++.+...+.+.+.|+++|.++.|++++.+.... +..+....+.+++++. + +.+.+++..+++
T Consensus 96 ~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~- 174 (592)
T PRK10790 96 VVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMI- 174 (592)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999998888889999999999999999875543 3333333333333322 2 222333332222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000521 422 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC- 500 (1446)
Q Consensus 422 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~- 500 (1446)
+++.+.+..+..++..+..++..+..++..+...|.++|+++||.|+.|+.+.+++.+..++..+...+.....+..
T Consensus 175 --~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (592)
T PRK10790 175 --FPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLL 252 (592)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223344555666677777778888888899999999999999999999999888876655444433322222211
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 000521 501 ---VFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 577 (1446)
Q Consensus 501 ---~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~ 577 (1446)
..+......+..++.+ .+ +..+.++.+.+++++.++..+..|+..++..+..+.++..+.+||.++++.++.++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~-~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 330 (592)
T PRK10790 253 RPLLSLFSALILCGLLMLF-GF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG 330 (592)
T ss_pred HHHHHHHHHHHHHHHHHHH-HH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC
Confidence 1111111111112222 23 356789999999999999999999999999999999999999999999975432111
Q ss_pred hhhhcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCc
Q 000521 578 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 657 (1446)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~ 657 (1446)
.. .. ......++++|++|+|+.+ +++|+|+||++++||.++|+|+||||||||+++|+|++
T Consensus 331 ~~---~~-----------~~~~~~i~~~~v~f~y~~~-----~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~ 391 (592)
T PRK10790 331 ND---DR-----------PLQSGRIDIDNVSFAYRDD-----NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYY 391 (592)
T ss_pred CC---cc-----------CCCCCeEEEEEEEEEeCCC-----CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhccc
Confidence 00 00 1123469999999999632 23599999999999999999999999999999999999
Q ss_pred cCCCcEEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCccccc
Q 000521 658 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIG 724 (1446)
Q Consensus 658 ~~~~G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig 724 (1446)
+|++|+|.++| +|+||||+|++|++||||||.+|++.++++..+++++++++++++.+|+|++|.+|
T Consensus 392 ~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~ 471 (592)
T PRK10790 392 PLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLG 471 (592)
T ss_pred CCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhcccccccccc
Confidence 99999999987 49999999999999999999999888999999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeC
Q 000521 725 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 804 (1446)
Q Consensus 725 ~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~ 804 (1446)
++|.+||||||||++||||++++|+|++||||||+||++++++|.+. +.. +.+++|+|+||||++.++.||+|++|++
T Consensus 472 e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~-l~~-~~~~~tvIivtHr~~~l~~~D~ii~l~~ 549 (592)
T PRK10790 472 EQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQA-LAA-VREHTTLVVIAHRLSTIVEADTILVLHR 549 (592)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999887 433 4567999999999999999999999999
Q ss_pred CEEEEecChhHHHhccccCcc
Q 000521 805 GQVKWIGSSADLAVSLYSGFW 825 (1446)
Q Consensus 805 G~i~~~g~~~~l~~~~~~~~~ 825 (1446)
|++++.|+++|+++..+.+..
T Consensus 550 G~i~~~G~~~~L~~~~~~y~~ 570 (592)
T PRK10790 550 GQAVEQGTHQQLLAAQGRYWQ 570 (592)
T ss_pred CEEEEEcCHHHHHhCCCHHHH
Confidence 999999999999876554443
No 47
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=9.9e-64 Score=630.16 Aligned_cols=504 Identities=20% Similarity=0.192 Sum_probs=392.3
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 268 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 347 (1446)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir 347 (1446)
.+.+.+++.++...++.++..++..+.|++++.++|.+.........+.+.++++++.++..++.....+...+.+.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (529)
T TIGR02868 6 PLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSL 85 (529)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455667777778888899999999999999999876532221111111222223445566666667777788999999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHH---HHhhHhHHHHHHHHHH
Q 000521 348 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALY---LLYTQVKFAFVSGLAI 423 (1446)
Q Consensus 348 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~pl~i~i~~~---lL~~~lg~a~l~~~~v 423 (1446)
..+...+|+|.++++...+.+.++|+++|.++.|++++.+.... +..+....+.+++++. .+.+.+++.++++++
T Consensus 86 ~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~- 164 (529)
T TIGR02868 86 GRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLL- 164 (529)
T ss_pred HHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH-
Confidence 99999999999999999998999999999999999999986553 3444444444333333 233334433333322
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 424 TILLIPVNKWI-ANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 502 (1446)
Q Consensus 424 ~~~~~~~~~~~-~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 502 (1446)
++..+..++ .+..++..++..+..++..+...|.++|+++||.+++|+.+.+++++..++..+...+.....+....
T Consensus 165 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (529)
T TIGR02868 165 --LAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAA 242 (529)
T ss_pred --HHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222233 34345556777788899999999999999999999999999999988776666665555555444433
Q ss_pred HHHHHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhh
Q 000521 503 FWATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 580 (1446)
Q Consensus 503 ~~~~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~ 580 (1446)
+..... ..+.++++|.|.+.++.++++.+.+.+.+...+..|+..++..+..+.++.++.+|+.++++.++..+....
T Consensus 243 ~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~ 322 (529)
T TIGR02868 243 AQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVV 322 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCC
Confidence 332222 223345677787888899999999999999999999999999999999999999999999976543211000
Q ss_pred hcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000521 581 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 660 (1446)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~ 660 (1446)
..+. ........++++|++|+|+++ +++|+|+||++++||+++|+||||||||||+++|+|+++|+
T Consensus 323 --~~~~-------~~~~~~~~I~~~~vsf~Y~~~-----~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~ 388 (529)
T TIGR02868 323 --PAAG-------ALGLGKPTLELRDLSFGYPGS-----PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPL 388 (529)
T ss_pred --CCCc-------ccCCCCceEEEEEEEEecCCC-----CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 0000 001123469999999999642 23699999999999999999999999999999999999999
Q ss_pred CcEEEEeC------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCC
Q 000521 661 HGSIHASG------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKG 727 (1446)
Q Consensus 661 ~G~i~~~~------------~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g 727 (1446)
+|+|.++| +||||||+|++|++||||||.+|.+ .++++++++++.|+++++++.+|+|++|.+||+|
T Consensus 389 ~G~I~i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 468 (529)
T TIGR02868 389 QGEVTLDGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGG 468 (529)
T ss_pred CcEEEECCEEhhhHHHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhcccc
Confidence 99999998 7999999999999999999999865 6889999999999999999999999999999999
Q ss_pred CccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCc
Q 000521 728 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNV 790 (1446)
Q Consensus 728 ~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~ 790 (1446)
.+||||||||++||||++++|+|++||||||+||+++++.|.+.+ .. ..+++|+|+||||+
T Consensus 469 ~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l-~~-~~~~~TvIiItHrl 529 (529)
T TIGR02868 469 ARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDL-LA-ALSGKTVVVITHHL 529 (529)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HH-hcCCCEEEEEecCC
Confidence 999999999999999999999999999999999999999999884 33 56789999999985
No 48
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.5e-63 Score=635.62 Aligned_cols=541 Identities=18% Similarity=0.219 Sum_probs=425.4
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 265 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 344 (1446)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~ 344 (1446)
.++.+++.+++.++...++.++..++.++.|+++..+++.+-.+.+......+++.++++.++..++...+.+...+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (576)
T TIGR02204 8 ALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGE 87 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566777788888889999999999999999999974322222222223333444445555666667788889999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHhhHhHHHHHHHHH
Q 000521 345 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVAL-YLLYTQVKFAFVSGLA 422 (1446)
Q Consensus 345 ~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~-~lL~~~lg~a~l~~~~ 422 (1446)
++...+...+|+|.++.+.....+.+.|++.+.++.|++.+.+... .+..++...+.+++++ ++++....++.++.+
T Consensus 88 ~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~- 166 (576)
T TIGR02204 88 RVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLL- 166 (576)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH-
Confidence 9999999999999999999888888899999999999999987653 3444444444433332 233232222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 423 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 502 (1446)
Q Consensus 423 v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 502 (1446)
.+++.+.+..++.+++++..+++++..++..+...|.++|+++||.+++|+.+.+++++..++..+...+......+...
T Consensus 167 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (576)
T TIGR02204 167 AVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTA 246 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233334456788888889999999999999999999999999999999998888888766555554444433333222
Q ss_pred HHHHH--HHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhh
Q 000521 503 FWATT--PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 580 (1446)
Q Consensus 503 ~~~~~--~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~ 580 (1446)
+.... ...+.++.+|.|.+..+.+|++.++++..+...+..|+..++..+..+.+++.+++||.++++.++..+....
T Consensus 247 ~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~ 326 (576)
T TIGR02204 247 IVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAH 326 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCC
Confidence 22111 2233455677888888899999999999999999999999999999999999999999999976432111000
Q ss_pred hcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000521 581 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 660 (1446)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~ 660 (1446)
. ...+ ......++++|++|+|+.+++ +++|+|+||+++|||.++|+|+||||||||+++|+|+++|.
T Consensus 327 ~-~~~~---------~~~~~~i~~~~v~f~y~~~~~---~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~ 393 (576)
T TIGR02204 327 P-KTLP---------VPLRGEIEFEQVNFAYPARPD---QPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQ 393 (576)
T ss_pred C-ccCC---------cCCCceEEEEEEEEECCCCCC---CccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC
Confidence 0 0000 012346999999999975322 34699999999999999999999999999999999999999
Q ss_pred CcEEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCC
Q 000521 661 HGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 726 (1446)
Q Consensus 661 ~G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~ 726 (1446)
+|+|.++| .++||||+|++|++||||||.+|.+ .++++..++++.+++.++++.+|+|++|.+|++
T Consensus 394 ~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~ 473 (576)
T TIGR02204 394 SGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGER 473 (576)
T ss_pred CCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCC
Confidence 99999987 5999999999999999999999875 577889999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCE
Q 000521 727 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 806 (1446)
Q Consensus 727 g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 806 (1446)
|.+||||||||++||||++++|++++||||||+||+++++.+++. +.. ..+++|+|+|||+++.++.+|+|++|++|+
T Consensus 474 g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~-l~~-~~~~~t~IiitH~~~~~~~~d~vi~l~~g~ 551 (576)
T TIGR02204 474 GVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQA-LET-LMKGRTTLIIAHRLATVLKADRIVVMDQGR 551 (576)
T ss_pred CCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999988876 443 456899999999999999999999999999
Q ss_pred EEEecChhHHHhccc
Q 000521 807 VKWIGSSADLAVSLY 821 (1446)
Q Consensus 807 i~~~g~~~~l~~~~~ 821 (1446)
+++.|+++++.++.+
T Consensus 552 ~~~~g~~~~l~~~~~ 566 (576)
T TIGR02204 552 IVAQGTHAELIAKGG 566 (576)
T ss_pred EEeeecHHHHHHcCC
Confidence 999999999876543
No 49
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4.9e-63 Score=641.35 Aligned_cols=541 Identities=19% Similarity=0.214 Sum_probs=438.6
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 265 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 344 (1446)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~ 344 (1446)
.++..++.+++.+...++..++..++.++.|++++.++|.+-...+....+.++++++++.++..++.....+...+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 208 (694)
T TIGR01846 129 WFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTS 208 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445566777788888899999999999999999999987543333344455566666677788888888899999999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHH
Q 000521 345 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 423 (1446)
Q Consensus 345 ~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v 423 (1446)
++...+...+|+|.++++...+.+.++|++++.+ .|++.+.+... .+..+....+.+++.+.+++..-++.+++.+++
T Consensus 209 ~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~ 287 (694)
T TIGR01846 209 RIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGS 287 (694)
T ss_pred HHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 59999988653 333333222222222323333222333333344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 424 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFF 503 (1446)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~ 503 (1446)
+++.+.+..++.+++++..++.++..+++.+.+.|.++|+++||.+|.|+.+.+++++.-++..+...+..........+
T Consensus 288 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (694)
T TIGR01846 288 LVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQA 367 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455556677788888888889999999999999999999999999999999988887666666655555554444333
Q ss_pred HHHHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhh
Q 000521 504 WATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQA 581 (1446)
Q Consensus 504 ~~~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~ 581 (1446)
..... ..+.++++|+|.+..+.+|.|.++++..+...+..|+..+...+..+.+++++++|+.++++.++..+.. .
T Consensus 368 ~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~-~- 445 (694)
T TIGR01846 368 IELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA-G- 445 (694)
T ss_pred HHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC-C-
Confidence 22222 2233567888888888999999999999999999999999999999999999999999999765432110 0
Q ss_pred cCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCC
Q 000521 582 ANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH 661 (1446)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~ 661 (1446)
... .+..+..++++|++|+|+++. +++|+|+||++++||.++|+|+||||||||+++|+|+++|++
T Consensus 446 --~~~--------~~~~~~~i~~~~vsf~y~~~~----~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~ 511 (694)
T TIGR01846 446 --LAA--------LPELRGAITFENIRFRYAPDS----PEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQH 511 (694)
T ss_pred --CCC--------CCCCCCeEEEEEEEEEcCCCC----ccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCC
Confidence 000 012235799999999996431 235999999999999999999999999999999999999999
Q ss_pred cEEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCC
Q 000521 662 GSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKG 727 (1446)
Q Consensus 662 G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g 727 (1446)
|+|.++| .|+||+|+|++|++||+|||.++.+ .++++..++++.++++++++.+|+|.+|.+|++|
T Consensus 512 G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g 591 (694)
T TIGR01846 512 GQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKG 591 (694)
T ss_pred ceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCC
Confidence 9999987 4899999999999999999999764 6788899999999999999999999999999999
Q ss_pred CccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEE
Q 000521 728 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQV 807 (1446)
Q Consensus 728 ~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i 807 (1446)
.+||||||||++||||++++|+++|||||||+||+++++++.+. +.. ..+++|+|++|||++.++.||+|++|++|++
T Consensus 592 ~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~-~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i 669 (694)
T TIGR01846 592 ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRN-MRE-ICRGRTVIIIAHRLSTVRACDRIIVLEKGQI 669 (694)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHH-HHH-HhCCCEEEEEeCChHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999987 333 4568999999999999999999999999999
Q ss_pred EEecChhHHHhccccCc
Q 000521 808 KWIGSSADLAVSLYSGF 824 (1446)
Q Consensus 808 ~~~g~~~~l~~~~~~~~ 824 (1446)
+++|+++++++..+.+.
T Consensus 670 ~~~g~~~~l~~~~~~y~ 686 (694)
T TIGR01846 670 AESGRHEELLALQGLYA 686 (694)
T ss_pred EEeCCHHHHHHcCChHH
Confidence 99999999987655443
No 50
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-65 Score=649.21 Aligned_cols=480 Identities=22% Similarity=0.291 Sum_probs=346.4
Q ss_pred CceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC----------
Q 000521 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 668 (1446)
Q Consensus 599 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~---------- 668 (1446)
+..++++|++++|..... ..++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 10 ~~~l~v~~l~~~y~~~~~--~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~ 87 (623)
T PRK10261 10 RDVLAVENLNIAFMQEQQ--KIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQV 87 (623)
T ss_pred CceEEEeceEEEecCCCC--ceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccc
Confidence 346899999999963211 12469999999999999999999999999999999999999999987643
Q ss_pred -----------------eEEEEcCCC--CCCC-ccHHHHHhcCC----CCCh----hhHHHHHHHhcchHHHhhccCCCc
Q 000521 669 -----------------SIAYVPQVP--WILS-GTIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDM 720 (1446)
Q Consensus 669 -----------------~i~yv~Q~p--~l~~-~ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~di~~~~~gd~ 720 (1446)
.||||+|+| .++. .||+|||.++. ..+. ++..++++..++... .
T Consensus 88 ~~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~--------~ 159 (623)
T PRK10261 88 IELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEA--------Q 159 (623)
T ss_pred cccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------h
Confidence 489999998 4654 59999998752 1222 234445555555310 1
Q ss_pred ccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhh-CCE
Q 000521 721 AYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADM 798 (1446)
Q Consensus 721 t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~ 798 (1446)
........+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+. +.... ..|+|+|+|||+++.+.. ||+
T Consensus 160 ~~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~l-l~~l~~~~g~tvi~itHdl~~~~~~adr 238 (623)
T PRK10261 160 TILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQL-IKVLQKEMSMGVIFITHDMGVVAEIADR 238 (623)
T ss_pred hHHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCE
Confidence 123456678999999999999999999999999999999999999988875 33311 237899999999998765 999
Q ss_pred EEEEeCCEEEEecChhHHHhccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcC
Q 000521 799 VVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEG 878 (1446)
Q Consensus 799 i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g 878 (1446)
|++|++|++++.|+++++...... . . ..
T Consensus 239 i~vl~~G~i~~~g~~~~~~~~~~~------~--------------------~---------------~~----------- 266 (623)
T PRK10261 239 VLVMYQGEAVETGSVEQIFHAPQH------P--------------------Y---------------TR----------- 266 (623)
T ss_pred EEEeeCCeecccCCHHHhhcCCCC------h--------------------h---------------hh-----------
Confidence 999999999988887765321000 0 0 00
Q ss_pred cchhHhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Q 000521 879 RVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFS 958 (1446)
Q Consensus 879 ~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~ 958 (1446)
.++.. .+. +..+.
T Consensus 267 --------~l~~~---------------------~~~--~~~~~------------------------------------ 279 (623)
T PRK10261 267 --------ALLAA---------------------VPQ--LGAMK------------------------------------ 279 (623)
T ss_pred --------hhhhc---------------------cCc--ccccc------------------------------------
Confidence 00000 000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHH
Q 000521 959 FAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFL 1038 (1446)
Q Consensus 959 ~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~ 1038 (1446)
|+ .++
T Consensus 280 ---------------------------------~~--------------~~~---------------------------- 284 (623)
T PRK10261 280 ---------------------------------GL--------------DYP---------------------------- 284 (623)
T ss_pred ---------------------------------cc--------------cCC----------------------------
Confidence 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 1039 LLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTAS 1118 (1446)
Q Consensus 1039 ~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~ 1118 (1446)
.+.|.. +
T Consensus 285 ------------------------------~~~~~~----~--------------------------------------- 291 (623)
T PRK10261 285 ------------------------------RRFPLI----S--------------------------------------- 291 (623)
T ss_pred ------------------------------cccccc----c---------------------------------------
Confidence 000000 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcC
Q 000521 1119 LWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV 1198 (1446)
Q Consensus 1119 ~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~ 1198 (1446)
.. . .. .. .
T Consensus 292 ---------------------~~---~-~~-~~----------------------------------------------~ 299 (623)
T PRK10261 292 ---------------------LE---H-PA-KQ----------------------------------------------E 299 (623)
T ss_pred ---------------------cc---c-cc-cc----------------------------------------------C
Confidence 00 0 00 00 0
Q ss_pred CccccccCCCCCCCCCCCccEEEEEEEEEecCC---------CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcC
Q 000521 1199 PQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL 1269 (1446)
Q Consensus 1199 ~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl 1269 (1446)
+.+. ....+ +....++++|++++|+.. ...+|+|+||+|++||++||+|+||||||||+++|.|+
T Consensus 300 ~~~~---~~~~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl 373 (623)
T PRK10261 300 PPIE---QDTVV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRL 373 (623)
T ss_pred cccc---ccccc---CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcC
Confidence 0000 00000 011259999999999621 13699999999999999999999999999999999999
Q ss_pred CCCCCceEEEcCeeCCCCChH---hHhcceEEEeCCCC--CCC-CcHHHhcCCC----CCCChHHHHHHHHHccHHHHHH
Q 000521 1270 TPICGGQILVDGLNIINTPVR---DLRGRFAVVPQSPF--LFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVE 1339 (1446)
Q Consensus 1270 ~~~~~G~I~IDG~di~~i~~~---~lR~~i~~VpQdp~--lF~-gTIR~NLdp~----~~~~d~ei~~aL~~~~L~~~i~ 1339 (1446)
++|++|+|.+||.++...+.. .+|++|+||||+|. +++ -|+++|+... +....++.. ....+.++
T Consensus 374 ~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~L~ 448 (623)
T PRK10261 374 VESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAA-----ARVAWLLE 448 (623)
T ss_pred CCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHH-----HHHHHHHH
Confidence 999999999999999877643 46788999999984 665 4999998531 111111111 11223344
Q ss_pred hCCCc-hhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHh
Q 000521 1340 AVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL 1416 (1446)
Q Consensus 1340 ~lgLd-t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~ 1416 (1446)
.+|++ .........||||||||++|||||+.+|++||||||||+||..+.+.+.+.|++.. .+.|||+|||+++.+.
T Consensus 449 ~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~ 528 (623)
T PRK10261 449 RVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVE 528 (623)
T ss_pred HcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH
Confidence 44664 33455566899999999999999999999999999999999999999999998754 3789999999999987
Q ss_pred h-cCEEEEEeCCEEEEEeccchhh
Q 000521 1417 N-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1417 ~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
. ||||++|++|+|+|.|.+..+|
T Consensus 529 ~~~dri~vl~~G~iv~~g~~~~i~ 552 (623)
T PRK10261 529 RISHRVAVMYLGQIVEIGPRRAVF 552 (623)
T ss_pred HhCCEEEEEECCEEEEecCHHHHh
Confidence 6 8999999999999999888765
No 51
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.2e-63 Score=677.86 Aligned_cols=529 Identities=19% Similarity=0.230 Sum_probs=405.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 894 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 973 (1446)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ 973 (1446)
+..+++.+++.++..++....++.+...++.... ......+...+++++++..++.+++.+++.+.+.+...+++.+
T Consensus 59 ~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lR~~ 135 (1466)
T PTZ00265 59 RKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNL---GENVNDIIFSLVLIGIFQFILSFISSFCMDVVTTKILKTLKLE 135 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444445555555555555566655553211 1123344556667777788888899999999999999999999
Q ss_pred HHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHH
Q 000521 974 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1053 (1446)
Q Consensus 974 ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~ 1053 (1446)
++++++++|++|||..+.|++++|++.|++.+...+...+..++..++.+++.++++++.+|.+.++++.++.+++.+..
T Consensus 136 ~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~~ 215 (1466)
T PTZ00265 136 FLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLCITCVFPLIYICGV 215 (1466)
T ss_pred HHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999888888888888888888888888877665544444333333333
Q ss_pred HHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 000521 1054 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII 1133 (1446)
Q Consensus 1054 ~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~ 1133 (1446)
.+.+..+...+......+...+.+.|+++|++|||+|+.|+++.++|.+..+...+..+.......+......++..+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 295 (1466)
T PTZ00265 216 ICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIGMINGFILASY 295 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444344444444455667789999999999999999999999999988888877766654444332222222221111
Q ss_pred HHHHHHHH-HhhcCC---CCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCC
Q 000521 1134 SFIATMAV-IGSRGN---LPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSL 1209 (1446)
Q Consensus 1134 ~~~~~~~v-~~~~~~---~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~ 1209 (1446)
.++.++.. ....+. ...+..++|.+...+.+.+.....+..+...+.++..+..|.+|+.+.++.+++..... .
T Consensus 296 ~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~~--~ 373 (1466)
T PTZ00265 296 AFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRKPLVENND--D 373 (1466)
T ss_pred HHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC--C
Confidence 11111110 001110 00112344544434434443344455667788899999999999999998766532111 1
Q ss_pred CCCCCCCccEEEEEEEEEecCCC-CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEE-cCeeCCCC
Q 000521 1210 SPDWPFQGLIEFQNVTMRYKPSL-PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILV-DGLNIINT 1287 (1446)
Q Consensus 1210 ~~~wp~~g~I~f~nVs~~Y~~~~-~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~I-DG~di~~i 1287 (1446)
....|..+.|+|+||+|+|+... .++|+|+||+|++||++||||+||||||||+++|.|+|+|++|+|.+ ||.|++++
T Consensus 374 ~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~ 453 (1466)
T PTZ00265 374 GKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDI 453 (1466)
T ss_pred CccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhC
Confidence 11223345899999999997432 36999999999999999999999999999999999999999999999 67999999
Q ss_pred ChHhHhcceEEEeCCCCCCCCcHHHhcCCCC-------------------------------------------------
Q 000521 1288 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH------------------------------------------------- 1318 (1446)
Q Consensus 1288 ~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~------------------------------------------------- 1318 (1446)
+.+++|++|++|||+|.+|++||+|||.++.
T Consensus 454 ~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (1466)
T PTZ00265 454 NLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNE 533 (1466)
T ss_pred CHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhcccccchhh
Confidence 9999999999999999999999999997631
Q ss_pred ---------CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHH
Q 000521 1319 ---------MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQ 1387 (1446)
Q Consensus 1319 ---------~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~ 1387 (1446)
..+|++++++++.+++++++..+ |+||.+|++|.+||||||||++||||++++|+|||||||||+||++
T Consensus 534 ~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~ 613 (1466)
T PTZ00265 534 LIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNK 613 (1466)
T ss_pred hhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHH
Confidence 24678999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc--CCcEEEEeccCchhHhhcCEEEEEeCC
Q 000521 1388 TASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHG 1427 (1446)
Q Consensus 1388 Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~~G 1427 (1446)
+++.|++.|++.. +++|+|+||||+++++.||+|+||++|
T Consensus 614 se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g 655 (1466)
T PTZ00265 614 SEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNR 655 (1466)
T ss_pred HHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCC
Confidence 9999999999875 489999999999999999999999996
No 52
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.5e-62 Score=622.40 Aligned_cols=534 Identities=19% Similarity=0.213 Sum_probs=417.1
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCC---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 269 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSG---HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 344 (1446)
Q Consensus 269 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~---~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~ 344 (1446)
+++.+++.++...++.++..++..+.|.+++.+++... .... .......+++++++.++..++.....+...+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (574)
T PRK11160 10 LYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDATF 89 (574)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777888888899999999999999999998642 2211 0111112333444556677777777788889999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHhhHhHHHHHHH
Q 000521 345 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY---LLYTQVKFAFVSG 420 (1446)
Q Consensus 345 ~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~---lL~~~lg~a~l~~ 420 (1446)
++...+...+|+|.++++....++.+.|++++.++.|++.+.+... .+..+....+.+++++. .+.+.+++..+++
T Consensus 90 ~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~ 169 (574)
T PRK11160 90 RVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGI 169 (574)
T ss_pred HHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988888999999999999999998664 34444444444433332 3333344333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 421 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 500 (1446)
Q Consensus 421 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 500 (1446)
++ ++...+..++.++.++..++..+..++..+.+.|.++|+++||.||.|+.+.+++++..++-.+...+.....+..
T Consensus 170 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (574)
T PRK11160 170 LL--LLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLS 247 (574)
T ss_pred HH--HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 2222233556677778888888999999999999999999999999999998888877655555544444444333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 000521 501 VFFWATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSL-ISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 577 (1446)
Q Consensus 501 ~~~~~~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l-~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~ 577 (1446)
..+..... ..+.++.+|.+.+ ++.++++..++++.+..++ ..|+..++..+..+.++.++.+||.++++.++..+.
T Consensus 248 ~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~ 326 (574)
T PRK11160 248 QALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTF 326 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 22222111 2223455666664 6778999988877765443 468888999999999999999999999976532110
Q ss_pred hhhhcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCc
Q 000521 578 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 657 (1446)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~ 657 (1446)
... .+. ......++++|++|+|+.++ +++|+|+||++++||.++|+||||||||||+++|+|++
T Consensus 327 ~~~---~~~---------~~~~~~i~~~~v~f~y~~~~----~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~ 390 (574)
T PRK11160 327 PTT---STA---------AADQVSLTLNNVSFTYPDQP----QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAW 390 (574)
T ss_pred Ccc---cCC---------CCCCCeEEEEEEEEECCCCC----CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 000 000 11235699999999996421 24699999999999999999999999999999999999
Q ss_pred cCCCcEEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccc
Q 000521 658 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYI 723 (1446)
Q Consensus 658 ~~~~G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~i 723 (1446)
+|++|+|.++| .|+||||+|++|++||+|||.++.+ .++++..++++.++++++++. |+|++|.+
T Consensus 391 ~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~v 469 (574)
T PRK11160 391 DPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWL 469 (574)
T ss_pred CCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchh
Confidence 99999999987 4999999999999999999999875 688899999999999999999 99999999
Q ss_pred cCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEe
Q 000521 724 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMD 803 (1446)
Q Consensus 724 g~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~ 803 (1446)
||+|.+||||||||++||||++++|++++||||||+||+++++++.+. +.. ..+++|+|+||||++.++.||+|++|+
T Consensus 470 ge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~-l~~-~~~~~tviiitHr~~~~~~~d~i~~l~ 547 (574)
T PRK11160 470 GEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILEL-LAE-HAQNKTVLMITHRLTGLEQFDRICVMD 547 (574)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecChhHHHhCCEEEEEe
Confidence 999999999999999999999999999999999999999999999887 433 456899999999999999999999999
Q ss_pred CCEEEEecChhHHHhccccCc
Q 000521 804 KGQVKWIGSSADLAVSLYSGF 824 (1446)
Q Consensus 804 ~G~i~~~g~~~~l~~~~~~~~ 824 (1446)
+|++++.|+++|++++++.+.
T Consensus 548 ~G~i~~~g~~~~l~~~~g~y~ 568 (574)
T PRK11160 548 NGQIIEQGTHQELLAQQGRYY 568 (574)
T ss_pred CCeEEEeCCHHHHHhcCcHHH
Confidence 999999999999987765443
No 53
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.7e-62 Score=625.75 Aligned_cols=532 Identities=19% Similarity=0.219 Sum_probs=413.0
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 269 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRS 348 (1446)
Q Consensus 269 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~ 348 (1446)
.++.++..++..++..++..++.++.|+++..++|.+.++.. . ..+++.++++.++..+......+...+...+++.
T Consensus 13 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (588)
T PRK13657 13 YLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKGD--I-FPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRL 89 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566677778888999999999999999999998764321 1 1122222222333333344455566778888899
Q ss_pred HHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHH---HHHhhHhHHHHHHHHHHH
Q 000521 349 SIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVAL---YLLYTQVKFAFVSGLAIT 424 (1446)
Q Consensus 349 ~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~---~lL~~~lg~a~l~~~~v~ 424 (1446)
.+...+|+|.++++.....+.+.|++++.++.|++.+.+... .+..+....+..++.+ +.+.+.+++..+ +++
T Consensus 90 ~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l---~~~ 166 (588)
T PRK13657 90 AVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLV---VLG 166 (588)
T ss_pred HHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 999999999999999888889999999999999999876432 3333333333222222 233333443333 333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 425 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 504 (1446)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 504 (1446)
++...+..++.++..+.+++.++..++..+...|.++|+++||.|+.|+.+.+++.+.-++-.+...+..........+.
T Consensus 167 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (588)
T PRK13657 167 IVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLN 246 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444566778888888888999999999999999999999999999998777776654333333222222222221111
Q ss_pred H--HHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhc
Q 000521 505 A--TTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 582 (1446)
Q Consensus 505 ~--~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 582 (1446)
. .....+.++++|.|.+..+.+|++.+++++.++..+..|+..+...+..+.++..+.+|+.++++.++..+....
T Consensus 247 ~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~-- 324 (588)
T PRK13657 247 RAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPG-- 324 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCC--
Confidence 1 112234456778888888899999999999999999999999999999999999999999999876432111000
Q ss_pred CCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCc
Q 000521 583 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 662 (1446)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G 662 (1446)
... .......++++|++|+|+.+ +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|
T Consensus 325 -~~~--------~~~~~~~I~~~~vsf~y~~~-----~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G 390 (588)
T PRK13657 325 -AID--------LGRVKGAVEFDDVSFSYDNS-----RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSG 390 (588)
T ss_pred -CCC--------cCCCCCeEEEEEEEEEeCCC-----CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCC
Confidence 000 01123469999999999632 2359999999999999999999999999999999999999999
Q ss_pred EEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000521 663 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1446)
Q Consensus 663 ~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 728 (1446)
+|.++| .|+||||+|++|++||||||.++++ .++++..++++.+++++.++.+|+|.+|.+|++|.
T Consensus 391 ~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~ 470 (588)
T PRK13657 391 RILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGR 470 (588)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCC
Confidence 999987 5999999999999999999999864 67888999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEE
Q 000521 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1446)
Q Consensus 729 ~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1446)
+||||||||++||||++++|+|++||||||+||+++++.+++.+ .. ..+++|+|+||||++.++.||+|++|++|++.
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l-~~-~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~ 548 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAAL-DE-LMKGRTTFIIAHRLSTVRNADRILVFDNGRVV 548 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH-HH-HhcCCEEEEEEecHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999998873 33 44689999999999999999999999999999
Q ss_pred EecChhHHHhccccCc
Q 000521 809 WIGSSADLAVSLYSGF 824 (1446)
Q Consensus 809 ~~g~~~~l~~~~~~~~ 824 (1446)
++|+++++++..+.+.
T Consensus 549 ~~g~~~~l~~~~~~y~ 564 (588)
T PRK13657 549 ESGSFDELVARGGRFA 564 (588)
T ss_pred EeCCHHHHHHCCChHH
Confidence 9999999986654443
No 54
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=3.5e-63 Score=625.65 Aligned_cols=511 Identities=16% Similarity=0.148 Sum_probs=382.7
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000521 902 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 981 (1446)
Q Consensus 902 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~ 981 (1446)
++.++...+....++.++.+.+.... ... ..+..++++.++..++.++..+.....+.+...+++.++++++++.
T Consensus 25 ~~~~~~~~~~~~~~~~i~~~i~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~ 99 (555)
T TIGR01194 25 ALGLAGGLAIIALLASINNAIHEENF--LGQ---GSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCEKILGA 99 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCc--ccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33444455555566677766553110 000 1122233445555667777778888899999999999999999999
Q ss_pred CcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 982 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1061 (1446)
Q Consensus 982 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~ 1061 (1446)
|+.+|++.++|++++|+++|++.+++.+.. +..++..++.+++.++++++..|.+.++++..+++...+.....+..++
T Consensus 100 ~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~ 178 (555)
T TIGR01194 100 PIEEIDRRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFK 178 (555)
T ss_pred CHHHHHhcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987753 5555666666666666777777766554433333322222222222233
Q ss_pred HHHHHHhhcchhHhHHHHhhcchHHHhhcCcHH--HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000521 1062 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSED--YFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATM 1139 (1446)
Q Consensus 1062 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~--~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 1139 (1446)
..+......+.+.+.+.|.+.|+++||+|+.++ ...+++.+..++..+................+++..+.. ++.
T Consensus 179 ~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 255 (555)
T TIGR01194 179 FFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLI---GCA 255 (555)
T ss_pred HHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 333333455678899999999999999999954 556677777666666554332222221111122211111 111
Q ss_pred HHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccc-cc---cC-CCC--CCC
Q 000521 1140 AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE-LC---GY-QSL--SPD 1212 (1446)
Q Consensus 1140 ~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~-~~---~~-~~~--~~~ 1212 (1446)
.+++.. .+..+.|.+...+.++..+..++..+...+.++++...+.+|+.++.+.+.++ .. .. ... .+.
T Consensus 256 ~~~~~~----~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~ 331 (555)
T TIGR01194 256 LFAAAM----FASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAH 331 (555)
T ss_pred HHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccc
Confidence 111110 12356788888888888999999999999999999999999999997642221 10 00 000 011
Q ss_pred CCCCccEEEEEEEEEecCC---CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh
Q 000521 1213 WPFQGLIEFQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV 1289 (1446)
Q Consensus 1213 wp~~g~I~f~nVs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~ 1289 (1446)
.+..+.|+|+||+|+|++. .+++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||+|+++++.
T Consensus 332 ~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~ 411 (555)
T TIGR01194 332 DKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSR 411 (555)
T ss_pred CCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH
Confidence 1234789999999999753 2369999999999999999999999999999999999999999999999999999999
Q ss_pred HhHhcceEEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHH
Q 000521 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARA 1367 (1446)
Q Consensus 1290 ~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1446)
+++|+++++|||||++|++|+|+|+.+ ..+|++++++++.++++++++.+ |+||. .+||||||||++||||
T Consensus 412 ~~~~~~i~~v~q~~~lf~~ti~~n~~~--~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRa 484 (555)
T TIGR01194 412 DDYRDLFSAIFADFHLFDDLIGPDEGE--HASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICA 484 (555)
T ss_pred HHHHhhCcEEccChhhhhhhhhccccc--chhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHH
Confidence 999999999999999999999999743 46788999999999999999988 99984 5899999999999999
Q ss_pred hccCCCEEEEeccCCCCCHHHHHHHHHHHHH-h-cCCcEEEEeccCchhHhhcCEEEEEeCCEEEEE
Q 000521 1368 LLKSSKVLCLDECTANVDAQTASILQNAISS-E-CKGMTVITIAHRISTVLNMDEILILDHGHLVCI 1432 (1446)
Q Consensus 1368 LLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~-~-~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~ 1432 (1446)
++++|+|||||||||+||++|++.+++.+.+ . .+++|+|+||||++++..||+|+||++|+++|.
T Consensus 485 ll~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 485 WLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999887643 2 368999999999999999999999999999874
No 55
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.6e-62 Score=619.76 Aligned_cols=520 Identities=19% Similarity=0.223 Sum_probs=415.3
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 272 AYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIM 351 (1446)
Q Consensus 272 ~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~ 351 (1446)
.+++.++..+++.++..++..+.|++++.++|.+....+....+.+++.++++.++..++.....+...+.+.++...+.
T Consensus 3 ~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 82 (544)
T TIGR01842 3 KNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALN 82 (544)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35666777888889999999999999999999765322223334455566666777888888888889999999999999
Q ss_pred HHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHH--HHHHHHHHHHHHHH--HHHHhhHhHHHHHHHHHHHHHH
Q 000521 352 TIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVA--LYLLYTQVKFAFVSGLAITILL 427 (1446)
Q Consensus 352 ~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~pl~i~i~--~~lL~~~lg~a~l~~~~v~~~~ 427 (1446)
..+|+|.++++... .+...+.++.|++++.+.... +..+...++.++.. ++.+.+.+++.++++++ +.
T Consensus 83 ~~~~~~ll~~~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~---l~ 154 (544)
T TIGR01842 83 QPIFAASFSATLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLLVCFLLHPWIGILALGGAV---VL 154 (544)
T ss_pred HHHHHHHhcCcccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH---HH
Confidence 99999999998732 245667788999999876543 33344444443332 33333444444433332 22
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 428 IPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATT 507 (1446)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~ 507 (1446)
..+..+..++.++..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++..++..+...+.....+....+....
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445666777788888999999999999999999999999999999999988876665555554444443332222222
Q ss_pred H--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCC
Q 000521 508 P--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSP 585 (1446)
Q Consensus 508 ~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~ 585 (1446)
. ..+.++++|.|.+.++.+|++.+++++.++..+..|+..+...+..+.+++.+.+|+.++++.++..+.. .+
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-----~~ 309 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA-----MP 309 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC-----CC
Confidence 1 2234567888888888999999999999999999999999999999999999999999999754432110 00
Q ss_pred CcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEE
Q 000521 586 SYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIH 665 (1446)
Q Consensus 586 ~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~ 665 (1446)
. +..+..++++|++|+|+..+ +++|+|+||++++||.++|+||||||||||+++|+|+++|++|+|.
T Consensus 310 ~---------~~~~~~i~~~~v~~~y~~~~----~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~ 376 (544)
T TIGR01842 310 L---------PEPEGHLSVENVTIVPPGGK----KPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVR 376 (544)
T ss_pred C---------CCCCCeEEEEEEEEEcCCCC----ccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE
Confidence 0 11234699999999996421 2459999999999999999999999999999999999999999999
Q ss_pred EeC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000521 666 ASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 731 (1446)
Q Consensus 666 ~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LS 731 (1446)
++| .++||||+|++|++|++|||.++.+ .+++++.++++.++++++++.+|+|++|.+|++|.+||
T Consensus 377 ~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LS 456 (544)
T TIGR01842 377 LDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLS 456 (544)
T ss_pred ECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCC
Confidence 986 4999999999999999999986554 78888999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEec
Q 000521 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 732 GGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g 811 (1446)
||||||++||||++++|+++|||||||+||+++++++.+. +.....+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 457 gGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g 535 (544)
T TIGR01842 457 GGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANA-IKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFG 535 (544)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHH-HHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeC
Confidence 9999999999999999999999999999999999999876 333123579999999999999899999999999999999
Q ss_pred ChhHHHh
Q 000521 812 SSADLAV 818 (1446)
Q Consensus 812 ~~~~l~~ 818 (1446)
+++++.+
T Consensus 536 ~~~~l~~ 542 (544)
T TIGR01842 536 ERDEVLA 542 (544)
T ss_pred CHHHHhh
Confidence 9998864
No 56
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.4e-65 Score=573.07 Aligned_cols=476 Identities=25% Similarity=0.365 Sum_probs=385.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhh-hHHhHhHH
Q 000521 958 SFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAV-VLSYVQVF 1036 (1446)
Q Consensus 958 ~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~-~~~~~~~~ 1036 (1446)
++...+..+-+.+--+.|.++.+..+.|.-+..+|-+..-......-|+..+-..+.+.+-.++-+...++ ......||
T Consensus 5 ~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~ 84 (497)
T COG5265 5 LFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWW 84 (497)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccH
Confidence 45556667777788888899999999998887777554444443334443343444444333333322222 22334567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 1037 FLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELT 1116 (1446)
Q Consensus 1037 ~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~ 1116 (1446)
+.++.+..+++|.++.-.-....-..||.-..+.+..++.-.+++-+..|+|.||.|+++..+|.+.++.++++..+...
T Consensus 85 f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~ 164 (497)
T COG5265 85 FALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHV 164 (497)
T ss_pred HHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHH
Confidence 76666665555544433222222334555555666667788899999999999999999999999999999999888877
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Q 000521 1117 ASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM 1196 (1446)
Q Consensus 1117 ~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~ 1196 (1446)
.-.||++.-..+..........+... ....+..+.|.+...-.+..+++.+++.+...+.++.+++...|+..+..
T Consensus 165 Sl~~Ln~gQ~~I~~~~l~~~m~~s~~----~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl 240 (497)
T COG5265 165 SLLVLNFGQTAIFSTGLRVMMTMSAL----GVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLL 240 (497)
T ss_pred HHHHHHHhhHHHHHHHHHHHHhhcHH----HHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhh
Confidence 77787776555444322222222111 11245567889999999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCC-CCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCc
Q 000521 1197 DVPQEELCGYQSLSPDWP-FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1275 (1446)
Q Consensus 1197 ~~~~e~~~~~~~~~~~wp-~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G 1275 (1446)
+.+.|....+ ..++-|| ..|.|.|+||+|.|.+. .++|+|+||++++|+++||||+||+||||+..+|+|||++++|
T Consensus 241 ~~~~~v~d~p-da~~L~~~~~g~v~F~~V~F~y~~~-r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG 318 (497)
T COG5265 241 DVEAEVSDAP-DAPPLWPVRLGAVAFINVSFAYDPR-RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG 318 (497)
T ss_pred ccchhhccCC-CCccccccccceEEEEEEEeecccc-chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc
Confidence 8877653322 2344575 46889999999999876 4799999999999999999999999999999999999999999
Q ss_pred eEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCC
Q 000521 1276 QILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGI 1352 (1446)
Q Consensus 1276 ~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~ 1352 (1446)
+|.|||+||..+..+.+|+.||+||||.+||+.|+..|+.++++ .+++|++.|++.+++.++++.+ |+||.|||+|-
T Consensus 319 ~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 319 SITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred eEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 99999999999999999999999999999999999999998875 5899999999999999999999 99999999999
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEE
Q 000521 1353 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCI 1432 (1446)
Q Consensus 1353 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~ 1432 (1446)
.||||||||+++||++|++|+||+||||||+||..||+.||..|++..+++|.++|||||+||.++|.|+||++|+|+|.
T Consensus 399 klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 399 KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccchhh
Q 000521 1433 SFICRYF 1439 (1446)
Q Consensus 1433 ~~~~~~~ 1439 (1446)
|+-..+.
T Consensus 479 g~h~~ll 485 (497)
T COG5265 479 GTHEELL 485 (497)
T ss_pred CcHHHHH
Confidence 9876553
No 57
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.2e-63 Score=678.09 Aligned_cols=247 Identities=21% Similarity=0.279 Sum_probs=196.2
Q ss_pred HHHHHHHhHHHHHHHHHh--cCCccccccCCCCCCCCCCCc--cEEEEEEEEEec--CCCCcccceeeEEEeCCcEEEEE
Q 000521 1179 FTETEKEMVSLERVLEYM--DVPQEELCGYQSLSPDWPFQG--LIEFQNVTMRYK--PSLPAALHDINFTIEGGTQVGIV 1252 (1446)
Q Consensus 1179 ~~~~e~~~~sv~Ri~~~~--~~~~e~~~~~~~~~~~wp~~g--~I~f~nVs~~Y~--~~~~~vL~~isl~I~~GekvgIv 1252 (1446)
..+.|+.+.++||..++. +.++|.......... .+.+| .++++||+++|+ ++.+.+|+|||++|+|||++||+
T Consensus 717 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~ 795 (1394)
T TIGR00956 717 GETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDM-EKESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALM 795 (1394)
T ss_pred ccccccccccccccccCCCCccccccccccccccc-cccCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEE
Confidence 345667778889988763 233332111111000 01134 479999999995 33457999999999999999999
Q ss_pred CCCCCCHHHHHHHHhcCCC---CCCceEEEcCeeCCCCChHhHhcceEEEeCCCCC-CCCcHHHhcCCC------CCCCh
Q 000521 1253 GRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFL-FEGSLRDNLDPF------HMNDD 1322 (1446)
Q Consensus 1253 GrTGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~l-F~gTIR~NLdp~------~~~~d 1322 (1446)
||||||||||+++|.|+.+ |++|+|.+||.++. ..+|++++||||++.+ +..|+||||++. ...++
T Consensus 796 G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~ 871 (1394)
T TIGR00956 796 GASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSK 871 (1394)
T ss_pred CCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCH
Confidence 9999999999999999997 68899999999985 2578999999998765 457999999742 12233
Q ss_pred HH----HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC-EEEEeccCCCCCHHHHHHHHHHHH
Q 000521 1323 LK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK-VLCLDECTANVDAQTASILQNAIS 1397 (1446)
Q Consensus 1323 ~e----i~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~-ILlLDEaTS~lD~~Te~~Iq~~I~ 1397 (1446)
++ +.++++..++.+ -.|+.+++.|.+||||||||++|||||+++|+ ||+||||||+||..+...|++.|+
T Consensus 872 ~~~~~~v~~~l~~l~L~~-----~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~ 946 (1394)
T TIGR00956 872 SEKMEYVEEVIKLLEMES-----YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMR 946 (1394)
T ss_pred HHHHHHHHHHHHHcCChh-----hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHH
Confidence 33 445566555543 36888888888999999999999999999997 999999999999999999999998
Q ss_pred Hh-cCCcEEEEeccCchhH--hhcCEEEEEeCC-EEEEEecc
Q 000521 1398 SE-CKGMTVITIAHRISTV--LNMDEILILDHG-HLVCISFI 1435 (1446)
Q Consensus 1398 ~~-~~~~TvI~IaHrl~ti--~~~DrIlvl~~G-~vvE~~~~ 1435 (1446)
+. .+|+|||+++|+++.. ..||+|++|++| +++++|.+
T Consensus 947 ~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~ 988 (1394)
T TIGR00956 947 KLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDL 988 (1394)
T ss_pred HHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCc
Confidence 86 4689999999999974 569999999997 99999987
No 58
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.7e-62 Score=621.70 Aligned_cols=522 Identities=20% Similarity=0.237 Sum_probs=412.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000521 284 KVVNDSIGFAGPLLLNKLIKFLQQGS-GHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVR 362 (1446)
Q Consensus 284 ~l~~~~~~~~~P~ll~~li~~~~~~~-~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy~K~L~l~ 362 (1446)
.++..++..+.|++++.++|.+.... .....+.+++.++++.++..++.....+...+.+.++...+...+|+|.++++
T Consensus 4 ~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~ 83 (569)
T PRK10789 4 LIIIAMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQH 83 (569)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34556777889999999999775422 22223334445555566677777677777888999999999999999999999
Q ss_pred ccccCCCChhHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHhHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 363 LAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKF-AFVSGLAITILLIPVNKWIANLIAN 440 (1446)
Q Consensus 363 ~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~pl~i~i~~~lL~~~lg~-a~l~~~~v~~~~~~~~~~~~~~~~~ 440 (1446)
...+.+.+.|++++.+++|++.+.... ..+..++..++..++++++++..++| .+++.++++++...+..++.+++.+
T Consensus 84 ~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 84 PEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888899999999999999998654 34555665555544444333223333 2223333333344455667777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Q 000521 441 ATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP--TLFSLFTFGL 518 (1446)
Q Consensus 441 ~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~--~~~~~~~f~~ 518 (1446)
..++..+..++..+.+.|.++|+++||.+++|+.+.+++.+..++..+...+.....+....+..... ..+.++++|.
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999999999999999999998888776544433333333333332222211111 2233456778
Q ss_pred HHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCccCCCC
Q 000521 519 FALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSK 598 (1446)
Q Consensus 519 ~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (1446)
|.+.++.+|++.+++++.+...+..|+..+++.+..+.+++++.+||.++++.++..+... .+. +..
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~----~~~---------~~~ 310 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS----EPV---------PEG 310 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC----CCC---------CCC
Confidence 8888889999999999999999999999999999999999999999999997643211000 000 112
Q ss_pred CceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC----------
Q 000521 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 668 (1446)
Q Consensus 599 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~---------- 668 (1446)
+..++++|++|+|+..+ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 311 ~~~I~~~~v~~~y~~~~----~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~ 386 (569)
T PRK10789 311 RGELDVNIRQFTYPQTD----HPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDS 386 (569)
T ss_pred CCcEEEEEEEEECCCCC----CccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHH
Confidence 34689999999997421 2459999999999999999999999999999999999999999999986
Q ss_pred ---eEEEEcCCCCCCCccHHHHHhcCC-CCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHH
Q 000521 669 ---SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 744 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARal 744 (1446)
.++||+|+|++|++|++|||.++. +.++++++++++.+++++++..+|+|++|.+|++|.+||||||||++||||+
T Consensus 387 ~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARal 466 (569)
T PRK10789 387 WRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARAL 466 (569)
T ss_pred HHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHH
Confidence 489999999999999999999985 4688899999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHhccccCc
Q 000521 745 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGF 824 (1446)
Q Consensus 745 y~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~ 824 (1446)
+++|+++|||||||+||+++++++.+. +.. ..+++|+|++||+++.++.||+|++|++|+++++|+++++.++.+.+.
T Consensus 467 l~~~~illlDEpts~LD~~~~~~i~~~-l~~-~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~ 544 (569)
T PRK10789 467 LLNAEILILDDALSAVDGRTEHQILHN-LRQ-WGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYR 544 (569)
T ss_pred hcCCCEEEEECccccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHH
Confidence 999999999999999999999999987 433 457899999999999999999999999999999999999987655443
No 59
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-64 Score=632.47 Aligned_cols=442 Identities=23% Similarity=0.312 Sum_probs=336.3
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccC--CCcEEEEeC----------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML--THGSIHASG---------- 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~--~~G~i~~~~---------- 668 (1446)
.++++|++++|.. .++|+|+||++++||+++|+||||||||||+++|.|.++| ++|+|.++|
T Consensus 5 ~l~~~nl~~~~~~------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~ 78 (506)
T PRK13549 5 LLEMKNITKTFGG------VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRD 78 (506)
T ss_pred eEEEeeeEEEeCC------eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHH
Confidence 4789999999852 2359999999999999999999999999999999999996 899999865
Q ss_pred ----eEEEEcCCCCCCCc-cHHHHHhcCCCC------Chh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchH
Q 000521 669 ----SIAYVPQVPWILSG-TIRDNILFGKNY------DPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 733 (1446)
Q Consensus 669 ----~i~yv~Q~p~l~~~-ti~~nI~~g~~~------~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGG 733 (1446)
.++||+|+|.++.. |++||+.++... +.+ +.+++++..++. ........+||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG 147 (506)
T PRK13549 79 TERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLD-----------INPATPVGNLGLG 147 (506)
T ss_pred HHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCC-----------CCcccchhhCCHH
Confidence 38999999987765 999999886421 221 223333333332 1234456789999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecC
Q 000521 734 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 812 (1446)
Q Consensus 734 QkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 812 (1446)
||||++||||+..+|+++||||||++||+...+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|+++..|+
T Consensus 148 qkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 226 (506)
T PRK13549 148 QQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDI-IRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRP 226 (506)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecc
Confidence 99999999999999999999999999999999988875 33212357899999999999865 99999999999987664
Q ss_pred hhHHHhccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcCcchhHhHHHHHhhh
Q 000521 813 SADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFS 892 (1446)
Q Consensus 813 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~ 892 (1446)
.+++.. .+ ... .+.
T Consensus 227 ~~~~~~-----------------------------------------------------~~-------~~~---~~~--- 240 (506)
T PRK13549 227 AAGMTE-----------------------------------------------------DD-------IIT---MMV--- 240 (506)
T ss_pred cccCCH-----------------------------------------------------HH-------HHH---Hhh---
Confidence 322100 00 000 000
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 893 GWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHN 972 (1446)
Q Consensus 893 g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~ 972 (1446)
. .
T Consensus 241 ------------------------------~---~--------------------------------------------- 242 (506)
T PRK13549 241 ------------------------------G---R--------------------------------------------- 242 (506)
T ss_pred ------------------------------C---c---------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHH
Q 000521 973 TLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQ 1052 (1446)
Q Consensus 973 ~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~ 1052 (1446)
+
T Consensus 243 ---------~---------------------------------------------------------------------- 243 (506)
T PRK13549 243 ---------E---------------------------------------------------------------------- 243 (506)
T ss_pred ---------C----------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 000521 1053 FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFI 1132 (1446)
Q Consensus 1053 ~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~ 1132 (1446)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCC
Q 000521 1133 ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPD 1212 (1446)
Q Consensus 1133 ~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~ 1212 (1446)
.. . ..+.+ .++
T Consensus 244 -----------------~~---~-----------------------------------------~~~~~------~~~-- 254 (506)
T PRK13549 244 -----------------LT---A-----------------------------------------LYPRE------PHT-- 254 (506)
T ss_pred -----------------cc---c-----------------------------------------ccccc------ccC--
Confidence 00 0 00000 000
Q ss_pred CCCCccEEEEEEEEEecC-CCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-CCCceEEEcCeeCCCCCh-
Q 000521 1213 WPFQGLIEFQNVTMRYKP-SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-ICGGQILVDGLNIINTPV- 1289 (1446)
Q Consensus 1213 wp~~g~I~f~nVs~~Y~~-~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-~~~G~I~IDG~di~~i~~- 1289 (1446)
+....|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.|+...+.
T Consensus 255 -~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~ 333 (506)
T PRK13549 255 -IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQ 333 (506)
T ss_pred -CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHH
Confidence 01124899999999953 23469999999999999999999999999999999999998 599999999999875543
Q ss_pred HhHhcceEEEeCCC---CCCC-CcHHHhcCCCC--CC------ChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCCh
Q 000521 1290 RDLRGRFAVVPQSP---FLFE-GSLRDNLDPFH--MN------DDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSV 1356 (1446)
Q Consensus 1290 ~~lR~~i~~VpQdp---~lF~-gTIR~NLdp~~--~~------~d~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G~~LSg 1356 (1446)
+..|++++|+||+| .+|+ -|+.+|+.... .. +.++ .+....+.++.+|++. ........|||
T Consensus 334 ~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~~LSg 408 (506)
T PRK13549 334 QAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAA-----ELKTILESIQRLKVKTASPELAIARLSG 408 (506)
T ss_pred HHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHH-----HHHHHHHHHHhcCccCCCcccccccCCH
Confidence 45677899999997 3565 59999996421 11 1111 1112334445556642 34555668999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEec
Q 000521 1357 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISF 1434 (1446)
Q Consensus 1357 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~ 1434 (1446)
|||||++||||++++|+||||||||++||..+.+.+.+.|++.. +++|||+|||+++.+.. |||+++|++|+++..|.
T Consensus 409 G~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~ 488 (506)
T PRK13549 409 GNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLKGDLI 488 (506)
T ss_pred HHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999999999998753 48999999999999875 89999999999998887
Q ss_pred cchh
Q 000521 1435 ICRY 1438 (1446)
Q Consensus 1435 ~~~~ 1438 (1446)
+..+
T Consensus 489 ~~~~ 492 (506)
T PRK13549 489 NHNL 492 (506)
T ss_pred cccC
Confidence 7654
No 60
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2.3e-64 Score=634.05 Aligned_cols=451 Identities=25% Similarity=0.336 Sum_probs=339.9
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEeC-------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~-----~~G~i~~~~------- 668 (1446)
.++++|++++|+... ....+|+|+||++++||+++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~--~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~ 82 (529)
T PRK15134 5 LLAIENLSVAFRQQQ--TVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHAS 82 (529)
T ss_pred eEEEeceEEEecCCC--CceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCC
Confidence 478999999985321 112469999999999999999999999999999999999986 799998754
Q ss_pred ----------eEEEEcCCCC--CCC-ccHHHHHhcCC----CCC----hhhHHHHHHHhcchHHHhhccCCCcccccCCC
Q 000521 669 ----------SIAYVPQVPW--ILS-GTIRDNILFGK----NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKG 727 (1446)
Q Consensus 669 ----------~i~yv~Q~p~--l~~-~ti~~nI~~g~----~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g 727 (1446)
.+||++|+|. +++ .|+++|+.++. ..+ .++.+++++.+++.... .......
T Consensus 83 ~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~~~~ 154 (529)
T PRK15134 83 EQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLTDYP 154 (529)
T ss_pred HHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhhCC
Confidence 3899999985 444 49999986421 122 13445566666664211 0124456
Q ss_pred CccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhh-CCEEEEEeCC
Q 000521 728 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKG 805 (1446)
Q Consensus 728 ~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G 805 (1446)
.+|||||||||+||||++.+|+++||||||++||+...+++.+. +..... .++|+|+|||+++.+.. ||+|++|++|
T Consensus 155 ~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G 233 (529)
T PRK15134 155 HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQL-LRELQQELNMGLLFITHNLSIVRKLADRVAVMQNG 233 (529)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHH-HHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECC
Confidence 78999999999999999999999999999999999999998875 322112 37899999999998765 9999999999
Q ss_pred EEEEecChhHHHhccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcCcchhHhH
Q 000521 806 QVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVY 885 (1446)
Q Consensus 806 ~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 885 (1446)
++++.|+++++.... .. . +
T Consensus 234 ~i~~~g~~~~~~~~~---------------------------------------------------------~~-~---~ 252 (529)
T PRK15134 234 RCVEQNRAATLFSAP---------------------------------------------------------TH-P---Y 252 (529)
T ss_pred EEEEeCCHHHHhhCC---------------------------------------------------------CC-H---H
Confidence 999887765542100 00 0 0
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 886 KNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLR 965 (1446)
Q Consensus 886 ~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 965 (1446)
.+ .
T Consensus 253 ---~~-----------------------------------------------------------------~--------- 255 (529)
T PRK15134 253 ---TQ-----------------------------------------------------------------K--------- 255 (529)
T ss_pred ---HH-----------------------------------------------------------------H---------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHH
Q 000521 966 AAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFW 1045 (1446)
Q Consensus 966 ~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~ 1045 (1446)
T Consensus 256 -------------------------------------------------------------------------------- 255 (529)
T PRK15134 256 -------------------------------------------------------------------------------- 255 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 000521 1046 FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRL 1125 (1446)
Q Consensus 1046 ~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l 1125 (1446)
++. .
T Consensus 256 --------~~~------------~-------------------------------------------------------- 259 (529)
T PRK15134 256 --------LLN------------S-------------------------------------------------------- 259 (529)
T ss_pred --------HHH------------h--------------------------------------------------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCcccccc
Q 000521 1126 QLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCG 1205 (1446)
Q Consensus 1126 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~ 1205 (1446)
. ... ++. .
T Consensus 260 ---------------------~-~~~-----------------------------------------------~~~--~- 267 (529)
T PRK15134 260 ---------------------E-PSG-----------------------------------------------DPV--P- 267 (529)
T ss_pred ---------------------C-ccc-----------------------------------------------ccc--c-
Confidence 0 000 000 0
Q ss_pred CCCCCCCCCCCccEEEEEEEEEecC---------CCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCce
Q 000521 1206 YQSLSPDWPFQGLIEFQNVTMRYKP---------SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQ 1276 (1446)
Q Consensus 1206 ~~~~~~~wp~~g~I~f~nVs~~Y~~---------~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~ 1276 (1446)
..++ ....|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ ++|+
T Consensus 268 -~~~~----~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~ 341 (529)
T PRK15134 268 -LPEP----ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN-SQGE 341 (529)
T ss_pred -cCCC----CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC-CCcE
Confidence 0000 0114899999999952 12469999999999999999999999999999999999985 8999
Q ss_pred EEEcCeeCCCCChHh---HhcceEEEeCCCC--CCC-CcHHHhcCCCC-----CCChHHHHHHHHHccHHHHHHhCCCc-
Q 000521 1277 ILVDGLNIINTPVRD---LRGRFAVVPQSPF--LFE-GSLRDNLDPFH-----MNDDLKIWSVLEKCHVKEEVEAVGLE- 1344 (1446)
Q Consensus 1277 I~IDG~di~~i~~~~---lR~~i~~VpQdp~--lF~-gTIR~NLdp~~-----~~~d~ei~~aL~~~~L~~~i~~lgLd- 1344 (1446)
|.+||.++...+... +|++++||||+|. +|+ .|+++|+.... ..+..+. +....+.++.+|++
T Consensus 342 i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~ 416 (529)
T PRK15134 342 IWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQR-----EQQVIAVMEEVGLDP 416 (529)
T ss_pred EEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHH-----HHHHHHHHHHcCCCH
Confidence 999999998776543 4778999999983 666 49999996421 0111111 11123344445665
Q ss_pred hhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEE
Q 000521 1345 TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEI 1421 (1446)
Q Consensus 1345 t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI 1421 (1446)
........+||||||||++||||++.+|+||||||||++||..+.+.+.+.|++.. .++|||+|||+++.+.. ||||
T Consensus 417 ~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i 496 (529)
T PRK15134 417 ETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQV 496 (529)
T ss_pred HHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeE
Confidence 24455667899999999999999999999999999999999999999999998764 27899999999999875 9999
Q ss_pred EEEeCCEEEEEeccchhh
Q 000521 1422 LILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1422 lvl~~G~vvE~~~~~~~~ 1439 (1446)
++|++|++++.|.+..++
T Consensus 497 ~~l~~G~i~~~~~~~~~~ 514 (529)
T PRK15134 497 IVLRQGEVVEQGDCERVF 514 (529)
T ss_pred EEEECCEEEEEcCHHHHh
Confidence 999999999999887654
No 61
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-64 Score=630.19 Aligned_cols=439 Identities=21% Similarity=0.323 Sum_probs=334.9
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|++++|.. +.+++|+||++++||+++|+||||||||||+++|.|..+|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 78 (510)
T PRK09700 5 YISMAGIGKSFGP------VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAA 78 (510)
T ss_pred eEEEeeeEEEcCC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHH
Confidence 4789999998852 2359999999999999999999999999999999999999999999875
Q ss_pred --eEEEEcCCCCCCCc-cHHHHHhcCCC-----C-----Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000521 669 --SIAYVPQVPWILSG-TIRDNILFGKN-----Y-----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 731 (1446)
Q Consensus 669 --~i~yv~Q~p~l~~~-ti~~nI~~g~~-----~-----~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LS 731 (1446)
.++|++|++.++.. |++||+.++.. + +. ++..++++.+++.. .......+||
T Consensus 79 ~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS 147 (510)
T PRK09700 79 QLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKV-----------DLDEKVANLS 147 (510)
T ss_pred HCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCC-----------CcccchhhCC
Confidence 38999999987765 99999987531 0 11 12333444444432 1244556899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEe
Q 000521 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 810 (1446)
Q Consensus 732 GGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 810 (1446)
|||||||+||||++.+|+++||||||++||+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..
T Consensus 148 gG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~ 226 (510)
T PRK09700 148 ISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLI-MNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCS 226 (510)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeee
Confidence 9999999999999999999999999999999999998876 33212347899999999999875 999999999999877
Q ss_pred cChhHHHhccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcCcchhHhHHHHHh
Q 000521 811 GSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAK 890 (1446)
Q Consensus 811 g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~ 890 (1446)
|+++++... +.. ....+
T Consensus 227 g~~~~~~~~------------------------------------------------~~~---~~~~~------------ 243 (510)
T PRK09700 227 GMVSDVSND------------------------------------------------DIV---RLMVG------------ 243 (510)
T ss_pred cchhhCCHH------------------------------------------------HHH---HHhcC------------
Confidence 664432100 000 00000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 891 FSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKV 970 (1446)
Q Consensus 891 ~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 970 (1446)
.
T Consensus 244 ------------------------------------~------------------------------------------- 244 (510)
T PRK09700 244 ------------------------------------R------------------------------------------- 244 (510)
T ss_pred ------------------------------------C-------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHH
Q 000521 971 HNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSK 1050 (1446)
Q Consensus 971 h~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~ 1050 (1446)
+.
T Consensus 245 -----------~~------------------------------------------------------------------- 246 (510)
T PRK09700 245 -----------EL------------------------------------------------------------------- 246 (510)
T ss_pred -----------Cc-------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 000521 1051 LQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAA 1130 (1446)
Q Consensus 1051 i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~ 1130 (1446)
. .
T Consensus 247 ------------~-----~------------------------------------------------------------- 248 (510)
T PRK09700 247 ------------Q-----N------------------------------------------------------------- 248 (510)
T ss_pred ------------c-----c-------------------------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCC
Q 000521 1131 FIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLS 1210 (1446)
Q Consensus 1131 ~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~ 1210 (1446)
.. .. . .++ ..++
T Consensus 249 ----------------~~-~~---~------------------------------------------~~~------~~~~ 260 (510)
T PRK09700 249 ----------------RF-NA---M------------------------------------------KEN------VSNL 260 (510)
T ss_pred ----------------cc-cc---c------------------------------------------ccc------cccC
Confidence 00 00 0 000 0000
Q ss_pred CCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh-
Q 000521 1211 PDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV- 1289 (1446)
Q Consensus 1211 ~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~- 1289 (1446)
+....++++|+++.|. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.
T Consensus 261 ---~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~ 333 (510)
T PRK09700 261 ---AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPL 333 (510)
T ss_pred ---CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHH
Confidence 0112599999998763 38999999999999999999999999999999999999999999999999876543
Q ss_pred HhHhcceEEEeCCC---CCCCC-cHHHhcCCCCCC------------ChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCC
Q 000521 1290 RDLRGRFAVVPQSP---FLFEG-SLRDNLDPFHMN------------DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGI 1352 (1446)
Q Consensus 1290 ~~lR~~i~~VpQdp---~lF~g-TIR~NLdp~~~~------------~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~ 1352 (1446)
..+|++++|+||++ .+|++ |+++|+...... ...+ ++....+.++.+|+. ........
T Consensus 334 ~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~ 408 (510)
T PRK09700 334 DAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVD-----EQRTAENQRELLALKCHSVNQNIT 408 (510)
T ss_pred HHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHH-----HHHHHHHHHHhcCCCCCCccCccc
Confidence 45678999999984 57765 999998753210 1111 111223444555664 34455556
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEE
Q 000521 1353 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLV 1430 (1446)
Q Consensus 1353 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vv 1430 (1446)
.||||||||++|||||+++|+|||||||||+||..+.+.+.+.|++.. ++.|||+|||+++.+.. ||||++|++|+++
T Consensus 409 ~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~ 488 (510)
T PRK09700 409 ELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLT 488 (510)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEE
Confidence 899999999999999999999999999999999999999999998753 48899999999998764 8999999999999
Q ss_pred EEecc
Q 000521 1431 CISFI 1435 (1446)
Q Consensus 1431 E~~~~ 1435 (1446)
+.+.+
T Consensus 489 ~~~~~ 493 (510)
T PRK09700 489 QILTN 493 (510)
T ss_pred EEecC
Confidence 88766
No 62
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=8.4e-62 Score=616.78 Aligned_cols=527 Identities=23% Similarity=0.285 Sum_probs=418.6
Q ss_pred HhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 273 YGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMT 352 (1446)
Q Consensus 273 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~ 352 (1446)
++ .++...++.++..++....|.++..+++.+.. .......+...+++++++..++.....+...+.+.++...+..
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~ 89 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA--DLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRR 89 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 77778888889999999999999999988761 2222233334444445556666666777777777999999999
Q ss_pred HHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH---hhHhHHHHHHHHHHHHHHH
Q 000521 353 IIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWS-LPFQIGVALYLL---YTQVKFAFVSGLAITILLI 428 (1446)
Q Consensus 353 ~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~-~pl~i~i~~~lL---~~~lg~a~l~~~~v~~~~~ 428 (1446)
.+|+|.++++...+.+...|++++.++.|++.+............ +++.+...+.++ .+.+++..+.+ .+++.
T Consensus 90 ~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~---~~~~~ 166 (567)
T COG1132 90 DLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLI---LPLLA 166 (567)
T ss_pred HHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH---HHHHH
Confidence 999999999999888888999999999999999987766432222 333333322222 22333333332 23333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH
Q 000521 429 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFF--WAT 506 (1446)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~--~~~ 506 (1446)
....++.++..+..++..+..++..+.+.|.++|++.||.|+.|+...++..+..++..+...+........... ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (567)
T COG1132 167 LVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLS 246 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555656688888888899999999999999999999999999877666665444444433322222222211 112
Q ss_pred HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCC
Q 000521 507 TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 586 (1446)
Q Consensus 507 ~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~ 586 (1446)
.-....++.++.+.+..+.++.|.+.+++.++..+..|+..+...+..+..+..+.+|+.++++.++...+... +
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~----~- 321 (567)
T COG1132 247 SLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPD----P- 321 (567)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCC----C-
Confidence 22233456667777778889999999999999999999999999999999999999999999987442111000 0
Q ss_pred cccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEE
Q 000521 587 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 666 (1446)
Q Consensus 587 ~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~ 666 (1446)
.......|+++|++|+|+++ +++|+|+||++++||.++||||+||||||++++|+|+++|++|+|.+
T Consensus 322 --------~~~~~~~I~f~~vsf~y~~~-----~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~i 388 (567)
T COG1132 322 --------LKDTIGSIEFENVSFSYPGK-----KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILI 388 (567)
T ss_pred --------CCCCCCeEEEEEEEEEcCCC-----CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEE
Confidence 01234569999999999742 34599999999999999999999999999999999999999999999
Q ss_pred eC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 667 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 667 ~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
+| +||||||+|+||++||+|||.+|++ .++++..++++.+++++.++.+|+|++|.+||+|.+|||
T Consensus 389 dg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSg 468 (567)
T COG1132 389 DGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSG 468 (567)
T ss_pred CCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCH
Confidence 87 5999999999999999999999987 588899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecC
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 812 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 812 (1446)
|||||++||||++++|+|++||||||+||+++++.|.+.+ .. +.++||+|+|+||++.+..||+|++|++|+|++.|+
T Consensus 469 GQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l-~~-l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~ 546 (567)
T COG1132 469 GQRQRLAIARALLRNPPILILDEATSALDTETEALIQDAL-KK-LLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGT 546 (567)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHH-HH-HhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecC
Confidence 9999999999999999999999999999999999999874 32 457789999999999999999999999999999999
Q ss_pred hhHHHhccccCcc
Q 000521 813 SADLAVSLYSGFW 825 (1446)
Q Consensus 813 ~~~l~~~~~~~~~ 825 (1446)
|+|++++++.+.+
T Consensus 547 h~eLl~~~g~y~~ 559 (567)
T COG1132 547 HEELLAKGGLYAR 559 (567)
T ss_pred HHHHHHcCCHHHH
Confidence 9999987665544
No 63
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=3.6e-64 Score=631.51 Aligned_cols=436 Identities=22% Similarity=0.338 Sum_probs=333.3
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCc--cCCCcEEEEe------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM--MLTHGSIHAS------------ 667 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~--~~~~G~i~~~------------ 667 (1446)
++++|++++|.. ..+|+|+||++++|++++|+||||||||||+++|+|.. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~ 74 (520)
T TIGR03269 1 IEVKNLTKKFDG------KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVER 74 (520)
T ss_pred CEEEEEEEEECC------eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccc
Confidence 357889988842 23599999999999999999999999999999999996 7999999875
Q ss_pred -----------C-----------------------eEEEEcCC-CCCCC-ccHHHHHhcCCC---CCh----hhHHHHHH
Q 000521 668 -----------G-----------------------SIAYVPQV-PWILS-GTIRDNILFGKN---YDP----QSYSETLK 704 (1446)
Q Consensus 668 -----------~-----------------------~i~yv~Q~-p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~ 704 (1446)
| .++|++|+ +.+++ .|++||+.++.. ++. ++..++++
T Consensus 75 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (520)
T TIGR03269 75 PSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIE 154 (520)
T ss_pred ccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 1 28999997 56665 599999987421 221 34555666
Q ss_pred HhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceE
Q 000521 705 ACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTR 783 (1446)
Q Consensus 705 ~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ 783 (1446)
.++++... .....+|||||||||+||||+..+|+++||||||++||+.+.+++.+. +..... .|+|+
T Consensus 155 ~~gl~~~~-----------~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tv 222 (520)
T TIGR03269 155 MVQLSHRI-----------THIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA-LEEAVKASGISM 222 (520)
T ss_pred HcCChhhh-----------hcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH-HHHHHHhcCcEE
Confidence 66664322 334568999999999999999999999999999999999999998775 332112 37899
Q ss_pred EEEccCcchhhh-CCEEEEEeCCEEEEecChhHHHhccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccC
Q 000521 784 ILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSV 862 (1446)
Q Consensus 784 ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (1446)
|+|||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 223 iivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~------------------------------------------- 259 (520)
T TIGR03269 223 VLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV------------------------------------------- 259 (520)
T ss_pred EEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH-------------------------------------------
Confidence 999999999865 999999999998765543221000
Q ss_pred CcchhHHHHHHHHhcCcchhHhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHH
Q 000521 863 SDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLC 942 (1446)
Q Consensus 863 ~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~ 942 (1446)
|. .
T Consensus 260 -------------------------~~---------------------------------~------------------- 262 (520)
T TIGR03269 260 -------------------------FM---------------------------------E------------------- 262 (520)
T ss_pred -------------------------HH---------------------------------h-------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHH
Q 000521 943 IFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVG 1022 (1446)
Q Consensus 943 ~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~ 1022 (1446)
T Consensus 263 -------------------------------------------------------------------------------- 262 (520)
T TIGR03269 263 -------------------------------------------------------------------------------- 262 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHH
Q 000521 1023 LLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKE 1102 (1446)
Q Consensus 1023 ~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~ 1102 (1446)
...
T Consensus 263 --------------------------------------~~~--------------------------------------- 265 (520)
T TIGR03269 263 --------------------------------------GVS--------------------------------------- 265 (520)
T ss_pred --------------------------------------hch---------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 1103 HVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTET 1182 (1446)
Q Consensus 1103 ~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~ 1182 (1446)
. .
T Consensus 266 --------------------------------------------~----------------------------------~ 267 (520)
T TIGR03269 266 --------------------------------------------E----------------------------------V 267 (520)
T ss_pred --------------------------------------------h----------------------------------h
Confidence 0 0
Q ss_pred HHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEEEEEEEEecC---CCCcccceeeEEEeCCcEEEEECCCCCCH
Q 000521 1183 EKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKP---SLPAALHDINFTIEGGTQVGIVGRTGAGK 1259 (1446)
Q Consensus 1183 e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~---~~~~vL~~isl~I~~GekvgIvGrTGSGK 1259 (1446)
+. .++ .+. ....++++|++++|+. +..++|+|+||+|++||++||+|+|||||
T Consensus 268 ~~-------------~~~-------~~~----~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGK 323 (520)
T TIGR03269 268 EK-------------ECE-------VEV----GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGK 323 (520)
T ss_pred cc-------------ccc-------cCC----CCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCH
Confidence 00 000 000 1125999999999953 23469999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCceEEEc-Ce---eCCCCC---hHhHhcceEEEeCCCCCCCC-cHHHhcCCC-C-CCChHHHHHHH
Q 000521 1260 SSILNALFRLTPICGGQILVD-GL---NIINTP---VRDLRGRFAVVPQSPFLFEG-SLRDNLDPF-H-MNDDLKIWSVL 1329 (1446)
Q Consensus 1260 STLl~~L~rl~~~~~G~I~ID-G~---di~~i~---~~~lR~~i~~VpQdp~lF~g-TIR~NLdp~-~-~~~d~ei~~aL 1329 (1446)
|||+++|.|+++|++|+|.++ |. ++...+ ...+|++++|+||++.+|+. |+++|+... . ....++.
T Consensus 324 STLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~---- 399 (520)
T TIGR03269 324 TTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELA---- 399 (520)
T ss_pred HHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHH----
Confidence 999999999999999999996 64 344332 23567789999999988875 999999631 1 1111110
Q ss_pred HHccHHHHHHhCCCch-----hhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CC
Q 000521 1330 EKCHVKEEVEAVGLET-----FVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KG 1402 (1446)
Q Consensus 1330 ~~~~L~~~i~~lgLdt-----~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~ 1402 (1446)
+....+.++.+|++. ........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .+
T Consensus 400 -~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g 478 (520)
T TIGR03269 400 -RMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEME 478 (520)
T ss_pred -HHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcC
Confidence 111223344445543 2455556799999999999999999999999999999999999999999998764 27
Q ss_pred cEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1403 MTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1403 ~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
.|||+|||+++.+.. ||||++|++|++++.|.+..++
T Consensus 479 ~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 516 (520)
T TIGR03269 479 QTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIV 516 (520)
T ss_pred cEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 899999999999876 8999999999999999887654
No 64
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-61 Score=571.75 Aligned_cols=523 Identities=23% Similarity=0.281 Sum_probs=419.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000521 281 GLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLY 360 (1446)
Q Consensus 281 ~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy~K~L~ 360 (1446)
.++..+..+....|-.++-..++.+-..+.....+.++++++++.++.+++.....+..++.+.++|..|+..+++|..+
T Consensus 6 ~ll~~l~~i~~i~qa~llA~~l~~l~~~~~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~ 85 (559)
T COG4988 6 ALLAVLSGIAIIAQAALLADILTKLIEGQLFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAK 85 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555555666667677766666554433344555677788888899999999999999999999999999999999999
Q ss_pred CCccccCCCChhHHHHHHHhHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 361 VRLAERSEFSDGEIQTFMSVDTDRTVNLAN----SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIAN 436 (1446)
Q Consensus 361 l~~~~~~~~~~g~i~nlms~D~~~i~~~~~----~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v~~~~~~~~~~~~~ 436 (1446)
++....+..++|+..+++..-+|.+...+. .....-..|+-+.++++++.+.-|+..++.+.++.+++ ..+++
T Consensus 86 ~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfM---ilvg~ 162 (559)
T COG4988 86 LGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFM---ILVGL 162 (559)
T ss_pred CChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH---HHHHH
Confidence 998888888899999999999999887543 33444567777888888888777766555554444433 34556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 437 LIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMK----TRSSEVKHLSTRKYLDAWCVFFWATTPTLFS 512 (1446)
Q Consensus 437 ~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~----~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (1446)
..++..+++++.-..-....-+.|+|+.++|.|+..+...++|.+ .|+.-|+.++-.-.-.+..-++.+.. +...
T Consensus 163 ~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~ls-iAlv 241 (559)
T COG4988 163 AAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLS-IALV 241 (559)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 666777788888888888899999999999999988777666654 56666666654322222223332222 2222
Q ss_pred HHHHHHHHHhC-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCC
Q 000521 513 LFTFGLFALMG-HQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNG 591 (1446)
Q Consensus 513 ~~~f~~~~~~~-~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~ 591 (1446)
.+.+| +.+.+ ++++....+.++.+---+-.|+..+...+..-.++.++.+++..|++.|............
T Consensus 242 Av~~g-~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~------- 313 (559)
T COG4988 242 AVYIG-FRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEV------- 313 (559)
T ss_pred HHHHH-HHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCcccccc-------
Confidence 23333 33455 6899999999999999999999999999999999999999999999877543311100000
Q ss_pred CccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC---
Q 000521 592 LSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--- 668 (1446)
Q Consensus 592 ~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~--- 668 (1446)
...+...+..+|.+|.|+.. +++++|+||++++|++++|||+||||||||+++|+|+.+|++|+|.++|
T Consensus 314 ---~~~~~~ei~~~~l~~~y~~g-----~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l 385 (559)
T COG4988 314 ---ANEPPIEISLENLSFRYPDG-----KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDL 385 (559)
T ss_pred ---ccCCCceeeecceEEecCCC-----CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccc
Confidence 01233455666999999753 1459999999999999999999999999999999999999999999987
Q ss_pred ----------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 ----------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 ----------~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
+++||+|+|.||++||||||+++++ .+++...++++..+|.+.++. |+|.+|++||+|.+|||||+||
T Consensus 386 ~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QR 464 (559)
T COG4988 386 RDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQR 464 (559)
T ss_pred cccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHH
Confidence 5999999999999999999999987 568899999999999999998 9999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHH
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 817 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~ 817 (1446)
|+||||+++++++||||||||+||.++++.|.+. +.. +.++||+|+||||++.+..+|+|++|++|+++++|+|+++.
T Consensus 465 laLARAll~~~~l~llDEpTA~LD~etE~~i~~~-l~~-l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~ 542 (559)
T COG4988 465 LALARALLSPASLLLLDEPTAHLDAETEQIILQA-LQE-LAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELS 542 (559)
T ss_pred HHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHH-HHH-HHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHh
Confidence 9999999999999999999999999999999887 443 67789999999999999999999999999999999999998
Q ss_pred hccccCccc
Q 000521 818 VSLYSGFWS 826 (1446)
Q Consensus 818 ~~~~~~~~~ 826 (1446)
++++.+..+
T Consensus 543 ~~~~~y~~l 551 (559)
T COG4988 543 EKQGLYANL 551 (559)
T ss_pred hcCcHHHHH
Confidence 877666544
No 65
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.7e-61 Score=609.88 Aligned_cols=507 Identities=21% Similarity=0.213 Sum_probs=400.4
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 274 GYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMT 352 (1446)
Q Consensus 274 ~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~ 352 (1446)
++.++..+++.++..++....|++++.++|.+. +.........+++.++++.++..++.....+...+++.++...+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 2 RRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677788889999999999999999999874 3222223334455555666777788888888899999999999999
Q ss_pred HHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHH---HhhHhHHHHHHHHHHHHHHH
Q 000521 353 IIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYL---LYTQVKFAFVSGLAITILLI 428 (1446)
Q Consensus 353 ~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~l---L~~~lg~a~l~~~~v~~~~~ 428 (1446)
.+|+|.++++.....+.++|+++|.++.|++.+.+... .+..+....+.+++++.+ +.+.+++..+++++ +..
T Consensus 82 ~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~---l~~ 158 (529)
T TIGR02857 82 RLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAP---LIP 158 (529)
T ss_pred HHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH---HHH
Confidence 99999999999988889999999999999999997654 355555444444333332 23334443333222 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 429 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP 508 (1446)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~ 508 (1446)
.+..++.++..+..++.++..+++.+.+.|.++|+++||.|++|+.+.+++++.-++..+...+..........+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (529)
T TIGR02857 159 IFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFA 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23355677777888888899999999999999999999999999999888876644444433333333332222222211
Q ss_pred HHH--HHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCC
Q 000521 509 TLF--SLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 586 (1446)
Q Consensus 509 ~~~--~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~ 586 (1446)
.+. .++.++.+.+..+.+|.+.+++++.+...+..|+..+...+..+.++.++++|+.++++.++.+.... ..+
T Consensus 239 ~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~---~~~- 314 (529)
T TIGR02857 239 TLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA---PVT- 314 (529)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---CCC-
Confidence 111 12234445555778999999999999999999999999999999999999999999997442111000 000
Q ss_pred cccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEE
Q 000521 587 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 666 (1446)
Q Consensus 587 ~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~ 666 (1446)
......++++|++|+|+..+ +++|+|+||++++|+.++|+||||||||||+++|+|+++|++|+|.+
T Consensus 315 ---------~~~~~~i~~~~v~f~y~~~~----~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~ 381 (529)
T TIGR02857 315 ---------AAPAPSLEFSGLSVAYPGRR----APALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAV 381 (529)
T ss_pred ---------CCCCCeEEEEEEEEECCCCC----cccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Confidence 01124699999999997431 24699999999999999999999999999999999999999999999
Q ss_pred eC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 667 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 667 ~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
+| +++||+|+|++|++||||||.++.+ .++++..++++.++++++++.+|+|++|.+||+|.+|||
T Consensus 382 ~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSg 461 (529)
T TIGR02857 382 NGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSG 461 (529)
T ss_pred CCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCH
Confidence 87 4999999999999999999999864 678899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEE
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVM 802 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l 802 (1446)
|||||++||||++++|++++||||||+||+++++.+++. +.. ..+++|+|+||||++.++.||+|++|
T Consensus 462 Gq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~-l~~-~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 462 GQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEA-LRA-LAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999999999999887 444 45789999999999999999999985
No 66
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=8.2e-64 Score=624.90 Aligned_cols=435 Identities=21% Similarity=0.302 Sum_probs=333.4
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|++++|.. .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~i~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~ 77 (501)
T PRK10762 4 LLQLKGIDKAFPG------VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQ 77 (501)
T ss_pred eEEEeeeEEEeCC------eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHH
Confidence 4789999998852 2359999999999999999999999999999999999999999999875
Q ss_pred --eEEEEcCCCCCCCc-cHHHHHhcCCCC-------Chh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000521 669 --SIAYVPQVPWILSG-TIRDNILFGKNY-------DPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1446)
Q Consensus 669 --~i~yv~Q~p~l~~~-ti~~nI~~g~~~-------~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 734 (1446)
.++|++|+|.++.. |++||+.++... +.+ +..++++.+++.. .......+|||||
T Consensus 78 ~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG~ 146 (501)
T PRK10762 78 EAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRF-----------SSDKLVGELSIGE 146 (501)
T ss_pred hCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCC-----------CccCchhhCCHHH
Confidence 38999999987754 999999986421 221 2334444444432 1234556899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecCh
Q 000521 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 813 (1446)
Q Consensus 735 kqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~ 813 (1446)
|||++||||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|+++..|+.
T Consensus 147 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~ 225 (501)
T PRK10762 147 QQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRV-IRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREV 225 (501)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCc
Confidence 9999999999999999999999999999999988865 32212347899999999999865 999999999999876543
Q ss_pred hHHHhccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcCcchhHhHHHHHhhhh
Q 000521 814 ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG 893 (1446)
Q Consensus 814 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g 893 (1446)
+++.. ++.
T Consensus 226 ~~~~~-----------------------------------------------------~~~------------------- 233 (501)
T PRK10762 226 ADLTE-----------------------------------------------------DSL------------------- 233 (501)
T ss_pred CcCCH-----------------------------------------------------HHH-------------------
Confidence 22100 000
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 894 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 973 (1446)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ 973 (1446)
...+...
T Consensus 234 ------------------------~~~~~~~------------------------------------------------- 240 (501)
T PRK10762 234 ------------------------IEMMVGR------------------------------------------------- 240 (501)
T ss_pred ------------------------HHHhcCC-------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHH
Q 000521 974 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1053 (1446)
Q Consensus 974 ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~ 1053 (1446)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 000521 1054 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII 1133 (1446)
Q Consensus 1054 ~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~ 1133 (1446)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCC
Q 000521 1134 SFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDW 1213 (1446)
Q Consensus 1134 ~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~w 1213 (1446)
.. . ..++. ...+
T Consensus 241 -------------~~-~----------------------------------------------~~~~~-----~~~~--- 252 (501)
T PRK10762 241 -------------KL-E----------------------------------------------DQYPR-----LDKA--- 252 (501)
T ss_pred -------------Cc-c----------------------------------------------ccccc-----cccC---
Confidence 00 0 00000 0000
Q ss_pred CCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh-HhH
Q 000521 1214 PFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDL 1292 (1446)
Q Consensus 1214 p~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~l 1292 (1446)
|..-.++++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+
T Consensus 253 ~~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~ 325 (501)
T PRK10762 253 PGEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGL 325 (501)
T ss_pred CCCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHH
Confidence 0112488999974 37999999999999999999999999999999999999999999999999987664 346
Q ss_pred hcceEEEeCCC---CCCC-CcHHHhcCCCCC---------CChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhH
Q 000521 1293 RGRFAVVPQSP---FLFE-GSLRDNLDPFHM---------NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQ 1358 (1446)
Q Consensus 1293 R~~i~~VpQdp---~lF~-gTIR~NLdp~~~---------~~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~~LSgGQ 1358 (1446)
|++++|+||+| .+|. -|+++|+..... .+.++. +....+.++.+|++ .........|||||
T Consensus 326 ~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~LSgGe 400 (501)
T PRK10762 326 ANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADE-----QQAVSDFIRLFNIKTPSMEQAIGLLSGGN 400 (501)
T ss_pred HCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHH-----HHHHHHHHHhcCCCCCCccCchhhCCHHH
Confidence 78899999997 3555 599999964210 111111 11233444555663 34556666899999
Q ss_pred HHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccc
Q 000521 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFIC 1436 (1446)
Q Consensus 1359 rQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~ 1436 (1446)
|||++||||++.+|+||||||||++||..+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.+.+.
T Consensus 401 kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~~~~ 480 (501)
T PRK10762 401 QQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGEFTRE 480 (501)
T ss_pred HHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEeccc
Confidence 999999999999999999999999999999999999998764 47899999999999875 8999999999999988887
Q ss_pred hh
Q 000521 1437 RY 1438 (1446)
Q Consensus 1437 ~~ 1438 (1446)
.+
T Consensus 481 ~~ 482 (501)
T PRK10762 481 QA 482 (501)
T ss_pred cC
Confidence 65
No 67
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2.9e-62 Score=560.26 Aligned_cols=530 Identities=20% Similarity=0.269 Sum_probs=446.2
Q ss_pred chHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 263 PSLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKL 342 (1446)
Q Consensus 263 ~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~ 342 (1446)
.....+.+..++..|+..+++..+.+++.++.|+++-++.|.+-.+.+......+.+.....|+++.+++....+...|+
T Consensus 11 ~~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Ri 90 (580)
T COG4618 11 KNLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRI 90 (580)
T ss_pred CchhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667778888888999999999999999999999999999998877777778888888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhHhHHHH
Q 000521 343 KLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-----NSFHDAWSLPFQIGVALYLLYTQVKFAF 417 (1446)
Q Consensus 343 ~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-----~~~~~~~~~pl~i~i~~~lL~~~lg~a~ 417 (1446)
+.++...|...||.-+++.+..........+.+ .|.+.+..+. ..+.+..+.|+.+++ +|+++..+|+.+
T Consensus 91 g~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v-~fl~Hp~lG~~a 165 (580)
T COG4618 91 GERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMPLYLAV-IFLFHPWLGLIA 165 (580)
T ss_pred HHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHHHHHHH-HHHHHHHHHHHH
Confidence 999999999999999976554433222222222 3666666654 357788889999887 789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 418 VSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLD 497 (1446)
Q Consensus 418 l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~ 497 (1446)
++|.++++.+..+|-++++ +..++-.+..-+|....+..++|..+|+.+|+.+...+++.+....-++...+..-..
T Consensus 166 ~~ga~iLv~la~ln~~~t~---~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~ 242 (580)
T COG4618 166 LAGAIILVVLALLNERATR---KPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRN 242 (580)
T ss_pred HHHHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999888888877766665 4566777888899999999999999999999999999999888776666655444333
Q ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCc
Q 000521 498 AWCVFFWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYK 575 (1446)
Q Consensus 498 ~~~~~~~~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~ 575 (1446)
.....+.-..-. -+.++..|+|++.++++|+|.++++..+......|+......+.++..|+.|.+|++++|......
T Consensus 243 ~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~ 322 (580)
T COG4618 243 GAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAA 322 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 322222211111 134567888999999999999999999999999999999999999999999999999999643221
Q ss_pred hhhhhhcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhc
Q 000521 576 HELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILG 655 (1446)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg 655 (1446)
++.. .. +.++..+.++++++.-|. ..+++++|+||++++||.++|+||||||||||.++|.|
T Consensus 323 ~~~m---~L-----------P~P~g~L~Ve~l~~~PPg----~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG 384 (580)
T COG4618 323 AERM---PL-----------PAPQGALSVERLTAAPPG----QKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVG 384 (580)
T ss_pred cCCC---CC-----------CCCCceeeEeeeeecCCC----CCCcceecceeEecCCceEEEECCCCccHHHHHHHHHc
Confidence 1111 11 234567889999986432 22456999999999999999999999999999999999
Q ss_pred CccCCCcEEEEeC-------------eEEEEcCCCCCCCccHHHHHh-cCCCCChhhHHHHHHHhcchHHHhhccCCCcc
Q 000521 656 EMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNIL-FGKNYDPQSYSETLKACTLDVDISLMVGGDMA 721 (1446)
Q Consensus 656 ~~~~~~G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~-~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t 721 (1446)
-.+|.+|.|++|| +|||.||+..||.|||+|||. |+.+.|+++.-++.++.+.++-|..+|+|++|
T Consensus 385 ~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT 464 (580)
T COG4618 385 IWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDT 464 (580)
T ss_pred ccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccC
Confidence 9999999999987 699999999999999999995 88888999999999999999999999999999
Q ss_pred cccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEE
Q 000521 722 YIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVV 801 (1446)
Q Consensus 722 ~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~ 801 (1446)
.||+.|.+|||||||||+||||+|.+|.+++||||-|+||.+-+..+.+. +..-..+|.|+|+||||++.+..+|+|.+
T Consensus 465 ~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~A-i~~~k~rG~~vvviaHRPs~L~~~Dkilv 543 (580)
T COG4618 465 RIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAA-ILAAKARGGTVVVIAHRPSALASVDKILV 543 (580)
T ss_pred ccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHH-HHHHHHcCCEEEEEecCHHHHhhcceeee
Confidence 99999999999999999999999999999999999999999988888766 54446678899999999999999999999
Q ss_pred EeCCEEEEecChhHHHhc
Q 000521 802 MDKGQVKWIGSSADLAVS 819 (1446)
Q Consensus 802 l~~G~i~~~g~~~~l~~~ 819 (1446)
|++|++...|+.+|+.++
T Consensus 544 l~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 544 LQDGRIAAFGPREEVLAK 561 (580)
T ss_pred ecCChHHhcCCHHHHHHH
Confidence 999999999999998765
No 68
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.4e-60 Score=604.91 Aligned_cols=533 Identities=18% Similarity=0.214 Sum_probs=413.8
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 269 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRS 348 (1446)
Q Consensus 269 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~ 348 (1446)
.++.+++.++..+++.++..++..+.|++++.++|.+...... ..+++.+++..++..+......+...++..+++.
T Consensus 13 ~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (585)
T TIGR01192 13 YLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSDV---LPTLALWAGFGVFNTIAYVLVAREADRLAHGRRA 89 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778888888899999999999999999999977542211 1111122223333444444455667788888999
Q ss_pred HHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHhhHhHHHHHHHHHHH
Q 000521 349 SIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY---LLYTQVKFAFVSGLAIT 424 (1446)
Q Consensus 349 ~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~---lL~~~lg~a~l~~~~v~ 424 (1446)
.+...+|+|.++++...+.+.++|++++.++.|++.+..... .+..+...++.++++++ .+.+.+++.++ +++
T Consensus 90 ~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l---~~~ 166 (585)
T TIGR01192 90 TLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLM---VLG 166 (585)
T ss_pred HHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 999999999999999998888999999999999999986543 33344444444433322 22233333322 223
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 425 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 504 (1446)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 504 (1446)
++...+..++.+++.+..++..+..++..+.+.|.++|+++||.+|.|+.+.+++++..++-.+...+.....+....+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (585)
T TIGR01192 167 ILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLN 246 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344456677777788888888889999999999999999999999998888877755433333333222222222221
Q ss_pred HHH--HHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhc
Q 000521 505 ATT--PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 582 (1446)
Q Consensus 505 ~~~--~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 582 (1446)
... ...+.++.+|.|.+.++.++.+.+++++.++..+..|+..+...+..+.++..+.+|+.++++.++..+....
T Consensus 247 ~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-- 324 (585)
T TIGR01192 247 RMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPAD-- 324 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcc--
Confidence 111 1223456678888888899999999999999999999999999999999999999999999975432111000
Q ss_pred CCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCc
Q 000521 583 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 662 (1446)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G 662 (1446)
.+. .+.....++++|++|+|+.+ +++|+|+||++++||.++|+||||||||||+++|+|+++|++|
T Consensus 325 -~~~--------~~~~~~~i~~~~v~~~y~~~-----~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G 390 (585)
T TIGR01192 325 -APE--------LPNVKGAVEFRHITFEFANS-----SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVG 390 (585)
T ss_pred -CCC--------CCCCCCeEEEEEEEEECCCC-----CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCC
Confidence 000 01123469999999999632 2359999999999999999999999999999999999999999
Q ss_pred EEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000521 663 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1446)
Q Consensus 663 ~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 728 (1446)
+|.++| .++||+|+|++|++|++|||.++.+ .++++..++++.+++++.+..+|+|++|.+|++|.
T Consensus 391 ~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~ 470 (585)
T TIGR01192 391 QILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGN 470 (585)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCC
Confidence 999876 4899999999999999999999864 56777888999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEE
Q 000521 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1446)
Q Consensus 729 ~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1446)
+||||||||++||||++++|+++|||||||+||+++++.+.+. +.. ..+++|+|+|||+++.++.||+|++|++|+++
T Consensus 471 ~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~-l~~-~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~ 548 (585)
T TIGR01192 471 RLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNA-IDA-LRKNRTTFIIAHRLSTVRNADLVLFLDQGRLI 548 (585)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHH-HHH-HhCCCEEEEEEcChHHHHcCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999876 433 45689999999999999999999999999999
Q ss_pred EecChhHHHhccccCcc
Q 000521 809 WIGSSADLAVSLYSGFW 825 (1446)
Q Consensus 809 ~~g~~~~l~~~~~~~~~ 825 (1446)
+.|+++++.++.+.+.+
T Consensus 549 ~~g~~~~l~~~~~~y~~ 565 (585)
T TIGR01192 549 EKGSFQELIQKDGRFYK 565 (585)
T ss_pred EECCHHHHHHCCChHHH
Confidence 99999999876654443
No 69
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2.2e-63 Score=621.88 Aligned_cols=445 Identities=22% Similarity=0.296 Sum_probs=330.1
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccC--CCcEEEEeC-----------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML--THGSIHASG----------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~--~~G~i~~~~----------- 668 (1446)
++++|++++|.. .++|+|+||++++|++++|+||||||||||+++|.|+.+| ++|+|.++|
T Consensus 2 l~i~~l~~~~~~------~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~ 75 (500)
T TIGR02633 2 LEMKGIVKTFGG------VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDT 75 (500)
T ss_pred EEEEeEEEEeCC------eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHH
Confidence 578899998842 2359999999999999999999999999999999999987 799999875
Q ss_pred ---eEEEEcCCCCCCCc-cHHHHHhcCCCC-------Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchH
Q 000521 669 ---SIAYVPQVPWILSG-TIRDNILFGKNY-------DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 733 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~~~-ti~~nI~~g~~~-------~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGG 733 (1446)
.++|++|+|.++.. |++||+.++..+ +. ++.+++++.+++.... ......+||||
T Consensus 76 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LSgG 145 (500)
T TIGR02633 76 ERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADN----------VTRPVGDYGGG 145 (500)
T ss_pred HhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCc----------ccCchhhCCHH
Confidence 38999999987765 999999886431 11 1233344444432111 12235689999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecC
Q 000521 734 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 812 (1446)
Q Consensus 734 QkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 812 (1446)
||||++||||++.+|+++||||||++||+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+
T Consensus 146 ~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~ 224 (500)
T TIGR02633 146 QQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDI-IRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKD 224 (500)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecC
Confidence 99999999999999999999999999999999998875 33212357899999999999875 99999999999875443
Q ss_pred hhHHHhccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcCcchhHhHHHHHhhh
Q 000521 813 SADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFS 892 (1446)
Q Consensus 813 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~ 892 (1446)
.+++. . . . ..
T Consensus 225 ~~~~~------------------------------------------------~-----~--------~--~~------- 234 (500)
T TIGR02633 225 MSTMS------------------------------------------------E-----D--------D--II------- 234 (500)
T ss_pred cccCC------------------------------------------------H-----H--------H--HH-------
Confidence 11100 0 0 0 00
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 893 GWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHN 972 (1446)
Q Consensus 893 g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~ 972 (1446)
.....
T Consensus 235 --------------------------~~~~~------------------------------------------------- 239 (500)
T TIGR02633 235 --------------------------TMMVG------------------------------------------------- 239 (500)
T ss_pred --------------------------HHHhC-------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHH
Q 000521 973 TLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQ 1052 (1446)
Q Consensus 973 ~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~ 1052 (1446)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T TIGR02633 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 000521 1053 FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFI 1132 (1446)
Q Consensus 1053 ~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~ 1132 (1446)
+
T Consensus 240 -----------------~-------------------------------------------------------------- 240 (500)
T TIGR02633 240 -----------------R-------------------------------------------------------------- 240 (500)
T ss_pred -----------------c--------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCC
Q 000521 1133 ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPD 1212 (1446)
Q Consensus 1133 ~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~ 1212 (1446)
. .. . ..+.+. .+
T Consensus 241 --------------~--~~---~-----------------------------------------~~~~~~-----~~--- 252 (500)
T TIGR02633 241 --------------E--IT---S-----------------------------------------LYPHEP-----HE--- 252 (500)
T ss_pred --------------c--cc---c-----------------------------------------cccccc-----cC---
Confidence 0 00 0 000000 00
Q ss_pred CCCCccEEEEEEEEEecCC-CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-CCceEEEcCeeCCCCC-h
Q 000521 1213 WPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-CGGQILVDGLNIINTP-V 1289 (1446)
Q Consensus 1213 wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-~~G~I~IDG~di~~i~-~ 1289 (1446)
+.+-.++++|++++|+.+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.++|.++...+ .
T Consensus 253 -~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~ 331 (500)
T TIGR02633 253 -IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPA 331 (500)
T ss_pred -CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHH
Confidence 011258999999999432 23699999999999999999999999999999999999995 8999999999986544 3
Q ss_pred HhHhcceEEEeCCC---CCCC-CcHHHhcCCCCC--CCh-HHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHH
Q 000521 1290 RDLRGRFAVVPQSP---FLFE-GSLRDNLDPFHM--NDD-LKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQL 1361 (1446)
Q Consensus 1290 ~~lR~~i~~VpQdp---~lF~-gTIR~NLdp~~~--~~d-~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G~~LSgGQrQr 1361 (1446)
..+|++++++||++ .+|+ -|+++|+..... ... ..+...-.+....+.++.+|+.. ........||||||||
T Consensus 332 ~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGqkqr 411 (500)
T TIGR02633 332 QAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIGRLSGGNQQK 411 (500)
T ss_pred HHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCccccCCHHHHHH
Confidence 56788999999996 3666 499999975310 100 00000001112333444445532 2344455799999999
Q ss_pred HHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccc
Q 000521 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFIC 1436 (1446)
Q Consensus 1362 l~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~ 1436 (1446)
++||||++++|++|||||||++||..+.+.+.+.|++.. ++.|||+|||+++.+.. ||+|++|++|+++......
T Consensus 412 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~~~ 488 (500)
T TIGR02633 412 AVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFVNH 488 (500)
T ss_pred HHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccc
Confidence 999999999999999999999999999999999887753 47899999999999875 8999999999998766443
No 70
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5e-63 Score=618.07 Aligned_cols=447 Identities=21% Similarity=0.348 Sum_probs=339.4
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------- 668 (1446)
..++++|+++.|.. +.+|+|+||++++|++++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 10 ~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 83 (510)
T PRK15439 10 PLLCARSISKQYSG------VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKA 83 (510)
T ss_pred ceEEEEeEEEEeCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHH
Confidence 35899999999852 2359999999999999999999999999999999999999999999876
Q ss_pred ---eEEEEcCCCCCCCc-cHHHHHhcCCCCC---hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000521 669 ---SIAYVPQVPWILSG-TIRDNILFGKNYD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~~~-ti~~nI~~g~~~~---~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lA 741 (1446)
.+||++|++.++.. |++||+.++.... +++..++++..++... ......+|||||||||+||
T Consensus 84 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la 152 (510)
T PRK15439 84 HQLGIYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLD-----------LDSSAGSLEVADRQIVEIL 152 (510)
T ss_pred HhCCEEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCcc-----------ccCChhhCCHHHHHHHHHH
Confidence 38999999987765 9999999875322 2345556666655422 2345568999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHHhcc
Q 000521 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVSL 820 (1446)
Q Consensus 742 Raly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~~~ 820 (1446)
|||+.+|+++||||||++||+...+++.+. +.....+|+|+|++||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 153 ~aL~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (510)
T PRK15439 153 RGLMRDSRILILDEPTASLTPAETERLFSR-IRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD 231 (510)
T ss_pred HHHHcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH
Confidence 999999999999999999999999998876 33212347899999999998765 9999999999999887765531100
Q ss_pred ccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcCcchhHhHHHHHhhhhHHHHHHH
Q 000521 821 YSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITLVI 900 (1446)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~ 900 (1446)
. ... +.
T Consensus 232 ------------------------------------------------~---~~~------------~~----------- 237 (510)
T PRK15439 232 ------------------------------------------------I---IQA------------IT----------- 237 (510)
T ss_pred ------------------------------------------------H---HHH------------Hh-----------
Confidence 0 000 00
Q ss_pred HHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000521 901 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 980 (1446)
Q Consensus 901 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~ 980 (1446)
.. . ...
T Consensus 238 ----------------------~~---~-~~~------------------------------------------------ 243 (510)
T PRK15439 238 ----------------------PA---A-REK------------------------------------------------ 243 (510)
T ss_pred ----------------------Cc---c-ccc------------------------------------------------
Confidence 00 0 000
Q ss_pred CCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 981 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1060 (1446)
Q Consensus 981 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr 1060 (1446)
T Consensus 244 -------------------------------------------------------------------------------- 243 (510)
T PRK15439 244 -------------------------------------------------------------------------------- 243 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000521 1061 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA 1140 (1446)
Q Consensus 1061 ~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~ 1140 (1446)
+.+.. .+
T Consensus 244 ~~~~~------------------------------------------~~------------------------------- 250 (510)
T PRK15439 244 SLSAS------------------------------------------QK------------------------------- 250 (510)
T ss_pred ccccc------------------------------------------cc-------------------------------
Confidence 00000 00
Q ss_pred HHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEE
Q 000521 1141 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIE 1220 (1446)
Q Consensus 1141 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~ 1220 (1446)
. . . ..+... ...+ +..-.++
T Consensus 251 ~-----~--~----------------------------------------------~~~~~~----~~~~---~~~~~l~ 270 (510)
T PRK15439 251 L-----W--L----------------------------------------------ELPGNR----RQQA---AGAPVLT 270 (510)
T ss_pred c-----c--c----------------------------------------------cccccc----cccC---CCCceEE
Confidence 0 0 0 000000 0000 0112489
Q ss_pred EEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHh-HhcceEEE
Q 000521 1221 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRFAVV 1299 (1446)
Q Consensus 1221 f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i~~V 1299 (1446)
++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|++++|+
T Consensus 271 ~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v 343 (510)
T PRK15439 271 VEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVYL 343 (510)
T ss_pred EeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEEC
Confidence 999983 2699999999999999999999999999999999999999999999999998776654 46789999
Q ss_pred eCCC---CCCCC-cHHHhcCCC--C---CC-ChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHh
Q 000521 1300 PQSP---FLFEG-SLRDNLDPF--H---MN-DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARAL 1368 (1446)
Q Consensus 1300 pQdp---~lF~g-TIR~NLdp~--~---~~-~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARAL 1368 (1446)
||++ .+|.. |+++|+..+ . .. ...+. +....+.++.+|++ .........||||||||++||||+
T Consensus 344 ~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~LSgG~kqrl~la~al 418 (510)
T PRK15439 344 PEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARE-----NAVLERYRRALNIKFNHAEQAARTLSGGNQQKVLIAKCL 418 (510)
T ss_pred CCChhhCCccCCCcHHHHHHhhhhhhhccccChHHH-----HHHHHHHHHHcCCCCCCccCccccCCcHHHHHHHHHHHH
Confidence 9996 36654 999998432 1 00 11111 11233445555775 455666678999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccch
Q 000521 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
+.+|+||||||||++||..+.+.+.+.|++.. +++|||+|||+++.+.+ ||||++|++|++++.+++..
T Consensus 419 ~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~ 489 (510)
T PRK15439 419 EASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAA 489 (510)
T ss_pred hhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEcccc
Confidence 99999999999999999999999999998753 48999999999999976 89999999999999887753
No 71
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-62 Score=612.61 Aligned_cols=199 Identities=19% Similarity=0.287 Sum_probs=167.1
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
..++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| ++++
T Consensus 318 ~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 384 (530)
T PRK15064 318 NALEVENLTKGFDN--GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANI 384 (530)
T ss_pred ceEEEEeeEEeeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEE
Confidence 36999999999964 3699999999999999999999999999999999999999999999987 3579
Q ss_pred EEEeCCCC--CCC-CcHHHhcCCCC--CCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHhcc
Q 000521 1297 AVVPQSPF--LFE-GSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLK 1370 (1446)
Q Consensus 1297 ~~VpQdp~--lF~-gTIR~NLdp~~--~~~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALLr 1370 (1446)
+|+||++. +++ .|+++|+..+. ...++++.++|+.. |+. ........+||||||||++||||+++
T Consensus 385 ~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~~LSgGq~qrv~la~al~~ 455 (530)
T PRK15064 385 GYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRL---------LFSQDDIKKSVKVLSGGEKGRMLFGKLMMQ 455 (530)
T ss_pred EEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHc---------CCChhHhcCcccccCHHHHHHHHHHHHHhc
Confidence 99999984 443 59999986432 11233445555554 442 23445566899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEE-EEeccchhh
Q 000521 1371 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLV-CISFICRYF 1439 (1446)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vv-E~~~~~~~~ 1439 (1446)
+|+||||||||++||..+.+.+.+.|++. +.|||+|||+++.+.. ||||++|++|+++ +.|.+..++
T Consensus 456 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~ 524 (530)
T PRK15064 456 KPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYL 524 (530)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHH
Confidence 99999999999999999999999999875 4699999999999876 8999999999998 667776543
No 72
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-62 Score=614.74 Aligned_cols=437 Identities=21% Similarity=0.285 Sum_probs=331.2
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|+. ..+|+|+||++++|++++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~ 77 (501)
T PRK11288 4 YLSFDGIGKTFPG------VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAAL 77 (501)
T ss_pred eEEEeeeEEEECC------EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHH
Confidence 4789999999852 2359999999999999999999999999999999999999999998865
Q ss_pred --eEEEEcCCCCCCCc-cHHHHHhcCCC------CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000521 669 --SIAYVPQVPWILSG-TIRDNILFGKN------YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1446)
Q Consensus 669 --~i~yv~Q~p~l~~~-ti~~nI~~g~~------~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 735 (1446)
.++|++|+|.+++. |++||+.++.. .+. ++..++++.+++... ......+||||||
T Consensus 78 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGq~ 146 (501)
T PRK11288 78 AAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDID-----------PDTPLKYLSIGQR 146 (501)
T ss_pred hCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCC-----------cCCchhhCCHHHH
Confidence 38999999988765 99999988631 121 233445555544321 2345568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChh
Q 000521 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 814 (1446)
Q Consensus 736 qRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~ 814 (1446)
||++||||+..+|+++||||||++||+.+.+.+.+.+ .....+|+|+|++||+++.+.. ||+|++|++|+++..++..
T Consensus 147 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l-~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 225 (501)
T PRK11288 147 QMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVI-RELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDM 225 (501)
T ss_pred HHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHH-HHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCcc
Confidence 9999999999999999999999999999999988763 3212347899999999999765 9999999999987433200
Q ss_pred HHHhccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcCcchhHhHHHHHhhhhH
Q 000521 815 DLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGW 894 (1446)
Q Consensus 815 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~ 894 (1446)
+ . . . .+. +.
T Consensus 226 ~-------------~---------------------------~-------~------~~~-------------~~----- 234 (501)
T PRK11288 226 A-------------Q---------------------------V-------D------RDQ-------------LV----- 234 (501)
T ss_pred c-------------c---------------------------C-------C------HHH-------------HH-----
Confidence 0 0 0 0 000 00
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 895 FITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTL 974 (1446)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~l 974 (1446)
..+...
T Consensus 235 ------------------------~~~~~~-------------------------------------------------- 240 (501)
T PRK11288 235 ------------------------QAMVGR-------------------------------------------------- 240 (501)
T ss_pred ------------------------HHhcCC--------------------------------------------------
Confidence 000000
Q ss_pred HHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHH
Q 000521 975 LTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFF 1054 (1446)
Q Consensus 975 l~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~ 1054 (1446)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK11288 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 000521 1055 YRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIIS 1134 (1446)
Q Consensus 1055 y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~ 1134 (1446)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK11288 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCC
Q 000521 1135 FIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWP 1214 (1446)
Q Consensus 1135 ~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp 1214 (1446)
.. .. . ...++. + +
T Consensus 241 ------------~~-~~----------------------------------------~---~~~~~~--------~---~ 253 (501)
T PRK11288 241 ------------EI-GD----------------------------------------I---YGYRPR--------P---L 253 (501)
T ss_pred ------------Cc-cc----------------------------------------c---cccccc--------C---C
Confidence 00 00 0 000000 0 0
Q ss_pred CCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCC-hHhHh
Q 000521 1215 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDLR 1293 (1446)
Q Consensus 1215 ~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~~lR 1293 (1446)
..-.++++|++++ .+++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .+..|
T Consensus 254 ~~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 327 (501)
T PRK11288 254 GEVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIR 327 (501)
T ss_pred CCcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHh
Confidence 1124889999742 4899999999999999999999999999999999999999999999999987543 34567
Q ss_pred cceEEEeCCCC---CCC-CcHHHhcCCCCC-C--------ChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHH
Q 000521 1294 GRFAVVPQSPF---LFE-GSLRDNLDPFHM-N--------DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQR 1359 (1446)
Q Consensus 1294 ~~i~~VpQdp~---lF~-gTIR~NLdp~~~-~--------~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~~LSgGQr 1359 (1446)
++++|+||+|. +|+ .|+.+|+..... . ...+ ++....+.++.+|++ ........+||||||
T Consensus 328 ~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~ 402 (501)
T PRK11288 328 AGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRW-----EAENADRFIRSLNIKTPSREQLIMNLSGGNQ 402 (501)
T ss_pred CCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHH-----HHHHHHHHHHhcCcccCCccCccccCCHHHH
Confidence 89999999973 554 699999864311 0 1100 011123344445663 334555568999999
Q ss_pred HHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccch
Q 000521 1360 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1360 Qrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
||++||||++.+|++|||||||++||..+.+.+.+.|++.. .+.|||+|||+++.+.. ||+|++|++|++++.|++..
T Consensus 403 qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~ 482 (501)
T PRK11288 403 QKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGELAREQ 482 (501)
T ss_pred HHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEEcccc
Confidence 99999999999999999999999999999999999997754 47899999999999865 89999999999999987764
Q ss_pred h
Q 000521 1438 Y 1438 (1446)
Q Consensus 1438 ~ 1438 (1446)
+
T Consensus 483 ~ 483 (501)
T PRK11288 483 A 483 (501)
T ss_pred C
Confidence 3
No 73
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.7e-61 Score=658.75 Aligned_cols=535 Identities=18% Similarity=0.187 Sum_probs=382.4
Q ss_pred hHhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 882 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 961 (1446)
Q Consensus 882 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 961 (1446)
.+..+..++..++..+... +..++...+...+++.++...+.............|+.++++..++..++.....+....
T Consensus 289 ~~l~~~l~~~~~~~~~~~~-~~~i~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 367 (1495)
T PLN03232 289 PWLLRALNNSLGGRFWLGG-IFKIGHDLSQFVGPVILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGR 367 (1495)
T ss_pred chHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666665555444333 334556666666777777665533211111111112222222222222222112222356
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHH
Q 000521 962 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1041 (1446)
Q Consensus 962 ~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1041 (1446)
.+.+....+...+++++++.|..++++.++|+++||+++|++.+++... .+..+....+.++..++++.....+..++.
T Consensus 368 ~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~~-~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~ 446 (1495)
T PLN03232 368 VGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIAE-QLHGLWSAPFRIIVSMVLLYQQLGVASLFG 446 (1495)
T ss_pred HHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 6777778888899999999999999999999999999999999998753 333333333333332222222111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 000521 1042 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1121 (1446)
Q Consensus 1042 ~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1121 (1446)
+++++++..+..++.+..+..++.....+....+.+.|.++|+++||+|+||+.+.+++.+..+...+..........+.
T Consensus 447 ~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~ 526 (1495)
T PLN03232 447 SLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFN 526 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11112221122223333333333334445556788999999999999999999999999887776665555443333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCcc
Q 000521 1122 SLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQE 1201 (1446)
Q Consensus 1122 ~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e 1201 (1446)
......... ++.++.+.+.... .+..++|.+..++++...+..++..+...+..+..+..|.+|+.++++.+++
T Consensus 527 ~~~~~~~~~-~~~~~~fg~~~v~-----~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~ 600 (1495)
T PLN03232 527 SFILNSIPV-VVTLVSFGVFVLL-----GGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEER 600 (1495)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 221111111 1111111111111 2345788888888899999999999999999999999999999999986654
Q ss_pred ccccCCCCCCCCCCCccEEEEEEEEEecCC-CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEc
Q 000521 1202 ELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD 1280 (1446)
Q Consensus 1202 ~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ID 1280 (1446)
.... .+ +..+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++|.+.
T Consensus 601 ~~~~--~~-~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~-- 675 (1495)
T PLN03232 601 ILAQ--NP-PLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV-- 675 (1495)
T ss_pred cccc--cC-CcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE--
Confidence 2111 11 111234679999999999753 35799999999999999999999999999999999999999999773
Q ss_pred CeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhH
Q 000521 1281 GLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1358 (1446)
Q Consensus 1281 G~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQ 1358 (1446)
.+|++|+||||+|++|+|||||||.++.++++++++++++.|++.++++.+ |+||.|||+|.+|||||
T Consensus 676 ----------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQ 745 (1495)
T PLN03232 676 ----------VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQ 745 (1495)
T ss_pred ----------EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHH
Confidence 368999999999999999999999999889999999999999999999988 99999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHH-HHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccch
Q 000521 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASIL-QNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1359 rQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~I-q~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
|||||||||++++|+|+|||||||+||++|++.| +++++...+++|+|+||||++++..||+|++|++|+++|.|++.+
T Consensus 746 kQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~e 825 (1495)
T PLN03232 746 KQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAE 825 (1495)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHH
Confidence 9999999999999999999999999999999866 566777778999999999999999999999999999999999876
Q ss_pred hh
Q 000521 1438 YF 1439 (1446)
Q Consensus 1438 ~~ 1439 (1446)
+.
T Consensus 826 L~ 827 (1495)
T PLN03232 826 LS 827 (1495)
T ss_pred HH
Confidence 53
No 74
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.5e-60 Score=639.80 Aligned_cols=217 Identities=22% Similarity=0.341 Sum_probs=183.1
Q ss_pred CccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcc
Q 000521 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1295 (1446)
Q Consensus 1216 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1295 (1446)
...|+++|++++|+....++|+|+||+|++||++||+|++|||||||+++|.|+.+|++|+|.++|.++.+ +....|++
T Consensus 1935 ~~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~ 2013 (2272)
T TIGR01257 1935 TDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQN 2013 (2272)
T ss_pred CceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhh
Confidence 34699999999997533579999999999999999999999999999999999999999999999999975 45678899
Q ss_pred eEEEeCCCCCCCC-cHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000521 1296 FAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1446)
Q Consensus 1296 i~~VpQdp~lF~g-TIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1371 (1446)
|||+||++.+++. |+||||..+. ..+++++.+. ..+.++.+||+.........||||||||+++||||+.+
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~-----v~~lLe~lgL~~~~dk~~~~LSGGqKqRLslA~ALi~~ 2088 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKV-----ANWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGC 2088 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcCCHHHhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999998875 9999996532 1222222211 12233334555445555567999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1372 ~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
|+||+|||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|+++.+
T Consensus 2089 P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~L 2157 (2272)
T TIGR01257 2089 PPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHL 2157 (2272)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999998753 58999999999999875 999999999999999999865
No 75
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=1.5e-60 Score=601.72 Aligned_cols=462 Identities=18% Similarity=0.231 Sum_probs=347.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhh
Q 000521 949 SFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAV 1028 (1446)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~ 1028 (1446)
.++.++..+.....+.+...+++.++++++++.|+++|++.++|++++|+++|++.+...+. .+..++..++.+++.++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~ 140 (547)
T PRK10522 62 MAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAA 140 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 44556677778888999999999999999999999999999999999999999999987544 34555666666677777
Q ss_pred hHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcH---HHHHHHHHHHHH
Q 000521 1029 VLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSE---DYFMAKFKEHVV 1105 (1446)
Q Consensus 1029 ~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e---~~~~~~~~~~~d 1105 (1446)
++.+.+|.++++++..+.+...+..+..+..+...+...+..+.+.+++.|.++|+++++ ++.+ +.+.+++.+..+
T Consensus 141 ~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~ 219 (547)
T PRK10522 141 YLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQ 219 (547)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHH
Confidence 777777776665544444333333333333333333334556778899999999999995 5443 466777777776
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHH-HHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 1106 LYQRTSYSELTASLWLSLRLQLLAAFI-ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEK 1184 (1446)
Q Consensus 1106 ~~~~~~~~~~~~~~wl~~~l~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~ 1184 (1446)
...+..+...... .....+..++ ....++..+... .. ...+.+.++....+...+..++..+...+.++..
T Consensus 220 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~ 291 (547)
T PRK10522 220 EYRHHIIRADTFH----LSAVNWSNIMMLGAIGLVFYMAN--SL--GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLS 291 (547)
T ss_pred HHHhhhHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHH--Hh--hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665444332211 1111111111 111111111111 00 1112333333334444566788899999999999
Q ss_pred HhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHH
Q 000521 1185 EMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILN 1264 (1446)
Q Consensus 1185 ~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~ 1264 (1446)
...+.+|+.++.+.++|+......+ -|..+.|+|+||+|+|++ .+++|+|+||+|+|||++||+|+||||||||++
T Consensus 292 ~~~a~~ri~~l~~~~~~~~~~~~~~---~~~~~~i~~~~v~f~y~~-~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ 367 (547)
T PRK10522 292 AQVAFNKLNKLALAPYKAEFPRPQA---FPDWQTLELRNVTFAYQD-NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAM 367 (547)
T ss_pred HHHHHHHHHHHhccccccccccccc---cCcCceEEEEEEEEEeCC-CCeEEecceEEEcCCCEEEEECCCCCCHHHHHH
Confidence 9999999999976554321111111 122367999999999974 356999999999999999999999999999999
Q ss_pred HHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCc
Q 000521 1265 ALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLE 1344 (1446)
Q Consensus 1265 ~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLd 1344 (1446)
+|.|+++|++|+|.+||+|+++++.+++|+++++|||||.+|+||+++| ....+|++++++++++++.+.+.
T Consensus 368 ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~----- 439 (547)
T PRK10522 368 LLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLE----- 439 (547)
T ss_pred HHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhh-----
Confidence 9999999999999999999999999999999999999999999999999 23567788888888877655433
Q ss_pred hhhhc---CCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhhcC
Q 000521 1345 TFVKE---SGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMD 1419 (1446)
Q Consensus 1345 t~v~e---~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~D 1419 (1446)
.++ +|.+||||||||++||||++++|+|||||||||+||+++++.+.+.+.+.. +++|+|+||||++++..||
T Consensus 440 --~~~~~~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d 517 (547)
T PRK10522 440 --LEDGRISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHAD 517 (547)
T ss_pred --ccccCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCC
Confidence 222 378999999999999999999999999999999999999999999987654 4899999999999999999
Q ss_pred EEEEEeCCEEEEEec
Q 000521 1420 EILILDHGHLVCISF 1434 (1446)
Q Consensus 1420 rIlvl~~G~vvE~~~ 1434 (1446)
+|++|++|+++|.+.
T Consensus 518 ~i~~l~~G~i~e~~~ 532 (547)
T PRK10522 518 RLLEMRNGQLSELTG 532 (547)
T ss_pred EEEEEECCEEEEecC
Confidence 999999999999754
No 76
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.3e-60 Score=654.26 Aligned_cols=532 Identities=18% Similarity=0.177 Sum_probs=377.9
Q ss_pred HhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 883 TVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFG 962 (1446)
Q Consensus 883 ~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~ 962 (1446)
+..+..++..++.++.. ++..++..++...+++.++...+.............++.++++..++..+...-..+.....
T Consensus 290 ~l~~~l~~~~~~~~~~~-~~~~i~~~~~~~~~P~ll~~li~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 368 (1622)
T PLN03130 290 WLLRALNNSLGGRFWLG-GFFKIGNDLSQFVGPLLLNLLLESMQNGEPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRV 368 (1622)
T ss_pred hHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555555443332 23445555666666777766554322111111111111111111111111111111123456
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHH
Q 000521 963 SLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLV 1042 (1446)
Q Consensus 963 ~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 1042 (1446)
+.+....+...+++++++.|..++++.++|+++|++++|++.+++.... +..+....+.++..++++.....+..++.+
T Consensus 369 ~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~~-l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~ 447 (1622)
T PLN03130 369 GFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQQ-LHTLWSAPFRIIIAMVLLYQQLGVASLIGS 447 (1622)
T ss_pred HHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777777888999999999999999999999999999999999987643 333333333333333332222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 000521 1043 PFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLS 1122 (1446)
Q Consensus 1043 pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~ 1122 (1446)
+++++...++.++.+..+..++.....+....+.+.|.++|+++||+|+||+.|.+++.+..+...+..........+..
T Consensus 448 ~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~ 527 (1622)
T PLN03130 448 LMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNS 527 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222333333333334444444556667889999999999999999999999998876665544333322222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccc
Q 000521 1123 LRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1202 (1446)
Q Consensus 1123 ~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~ 1202 (1446)
....... +++.++.+...... .+..++|.+..++++...+..++..+...+.++..+.++.+|+.++++.+++.
T Consensus 528 ~~~~~~~-~~v~~~~fg~~~~~-----~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~ 601 (1622)
T PLN03130 528 FILNSIP-VLVTVVSFGVFTLL-----GGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERV 601 (1622)
T ss_pred HHHHHHH-HHHHHHHHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 2111111 11111111111111 23467888888888888888999999999999999999999999999765432
Q ss_pred cccCCCCCCCCCCCccEEEEEEEEEecCC-CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCC-ceEEEc
Q 000521 1203 LCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG-GQILVD 1280 (1446)
Q Consensus 1203 ~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~-G~I~ID 1280 (1446)
... . ++ .-+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|.+ |+|.+
T Consensus 602 ~~~-~-~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l- 677 (1622)
T PLN03130 602 LLP-N-PP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVI- 677 (1622)
T ss_pred ccc-C-Cc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEE-
Confidence 111 1 11 11224579999999999753 3579999999999999999999999999999999999999999 99974
Q ss_pred CeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhH
Q 000521 1281 GLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1358 (1446)
Q Consensus 1281 G~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQ 1358 (1446)
|++|+||||+|++|+|||||||.++.++++++++++++.|+|.++++.+ |++|.|||+|.+|||||
T Consensus 678 ------------~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQ 745 (1622)
T PLN03130 678 ------------RGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQ 745 (1622)
T ss_pred ------------cCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHH
Confidence 7899999999999999999999999889999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHH-HHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccch
Q 000521 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASIL-QNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1359 rQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~I-q~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
||||+||||++++|+|+|||||||+||+++++.| +++++...+++|+|+||||++.+..||+|++|++|+|+|.|++..
T Consensus 746 KQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~e 825 (1622)
T PLN03130 746 KQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEE 825 (1622)
T ss_pred HHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHH
Confidence 9999999999999999999999999999999866 677887778999999999999999999999999999999999876
Q ss_pred h
Q 000521 1438 Y 1438 (1446)
Q Consensus 1438 ~ 1438 (1446)
+
T Consensus 826 L 826 (1622)
T PLN03130 826 L 826 (1622)
T ss_pred H
Confidence 5
No 77
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-62 Score=610.50 Aligned_cols=432 Identities=22% Similarity=0.317 Sum_probs=324.9
Q ss_pred EecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--------------eE
Q 000521 605 QDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------------SI 670 (1446)
Q Consensus 605 ~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~--------------~i 670 (1446)
+|+++.|+. +++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 2 ~nl~~~~~~------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 75 (491)
T PRK10982 2 SNISKSFPG------VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGI 75 (491)
T ss_pred CceEEEeCC------EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 466777742 2359999999999999999999999999999999999999999999876 38
Q ss_pred EEEcCCCCCCC-ccHHHHHhcCCC------CChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHH
Q 000521 671 AYVPQVPWILS-GTIRDNILFGKN------YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 739 (1446)
Q Consensus 671 ~yv~Q~p~l~~-~ti~~nI~~g~~------~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~ 739 (1446)
+|++|++.++. .|++||+.++.. .+.+ +.+++++.+++. ........+|||||||||+
T Consensus 76 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgGq~qrv~ 144 (491)
T PRK10982 76 SMVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDID-----------IDPRAKVATLSVSQMQMIE 144 (491)
T ss_pred EEEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCC-----------CCccCchhhCCHHHHHHHH
Confidence 99999998765 599999987631 1221 222333333332 2234456789999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHHh
Q 000521 740 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 740 lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
||||+..+|+++||||||++||+.+.+++.+. +.....+|+|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 145 lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 223 (491)
T PRK10982 145 IAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTI-IRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTM 223 (491)
T ss_pred HHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCH
Confidence 99999999999999999999999999999876 33212357899999999998765 99999999999987665322100
Q ss_pred ccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcCcchhHhHHHHHhhhhHHHHH
Q 000521 819 SLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITL 898 (1446)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~ 898 (1446)
.+. .
T Consensus 224 -----------------------------------------------------~~~-------~---------------- 227 (491)
T PRK10982 224 -----------------------------------------------------DKI-------I---------------- 227 (491)
T ss_pred -----------------------------------------------------HHH-------H----------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 899 VICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 978 (1446)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~v 978 (1446)
..+..
T Consensus 228 --------------------~~~~~------------------------------------------------------- 232 (491)
T PRK10982 228 --------------------AMMVG------------------------------------------------------- 232 (491)
T ss_pred --------------------HHHhC-------------------------------------------------------
Confidence 00000
Q ss_pred hcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 979 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1058 (1446)
Q Consensus 979 l~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~ 1058 (1446)
T Consensus 233 -------------------------------------------------------------------------------- 232 (491)
T PRK10982 233 -------------------------------------------------------------------------------- 232 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000521 1059 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIAT 1138 (1446)
Q Consensus 1059 sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 1138 (1446)
+
T Consensus 233 -----------~-------------------------------------------------------------------- 233 (491)
T PRK10982 233 -----------R-------------------------------------------------------------------- 233 (491)
T ss_pred -----------C--------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCcc
Q 000521 1139 MAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGL 1218 (1446)
Q Consensus 1139 ~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~ 1218 (1446)
. .. + ..+++. .+ +.+..
T Consensus 234 --------~--~~---------------------------------------~-----~~~~~~-----~~----~~~~~ 250 (491)
T PRK10982 234 --------S--LT---------------------------------------Q-----RFPDKE-----NK----PGEVI 250 (491)
T ss_pred --------C--cc---------------------------------------c-----cccccc-----CC----CCCcE
Confidence 0 00 0 000000 00 11125
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChH-hHhcceE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR-DLRGRFA 1297 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~-~lR~~i~ 1297 (1446)
|+++|++++| +++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+.. .+|+.++
T Consensus 251 i~~~~l~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~ 326 (491)
T PRK10982 251 LEVRNLTSLR----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFA 326 (491)
T ss_pred EEEeCccccc----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCE
Confidence 8999999975 2599999999999999999999999999999999999999999999999999876654 4577899
Q ss_pred EEeCCCC---CCC-CcHHHh-----cCCCCC----CChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHH
Q 000521 1298 VVPQSPF---LFE-GSLRDN-----LDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLIC 1363 (1446)
Q Consensus 1298 ~VpQdp~---lF~-gTIR~N-----Ldp~~~----~~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~ 1363 (1446)
|+||++. +|+ .|+++| +..... .+..+.. ....+.++.+|+. .........||||||||++
T Consensus 327 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~ 401 (491)
T PRK10982 327 LVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMK-----SDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVI 401 (491)
T ss_pred EcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHH-----HHHHHHHHhcCccCCCcccccccCCcHHHHHHH
Confidence 9999963 565 477766 321111 1111111 1123344444553 2345556689999999999
Q ss_pred HHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccc
Q 000521 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFIC 1436 (1446)
Q Consensus 1364 LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~ 1436 (1446)
||||++++|+||||||||++||..+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|+++..+++.
T Consensus 402 la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~~~~ 476 (491)
T PRK10982 402 IGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIVDTK 476 (491)
T ss_pred HHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEEccc
Confidence 9999999999999999999999999999999997653 48999999999999865 8999999999999777654
No 78
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=5e-62 Score=608.12 Aligned_cols=443 Identities=19% Similarity=0.238 Sum_probs=329.8
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|+++.|+. ..+|+|+||++++|++++|+||||||||||+++|.|+++|++|+|.++|
T Consensus 4 l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~ 77 (490)
T PRK10938 4 LQISQGTFRLSD------TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQK 77 (490)
T ss_pred EEEEeEEEEcCC------eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHH
Confidence 788999999852 1259999999999999999999999999999999999999999998764
Q ss_pred eEEEEcCCCCC---------CCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHH
Q 000521 669 SIAYVPQVPWI---------LSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 739 (1446)
Q Consensus 669 ~i~yv~Q~p~l---------~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~ 739 (1446)
.++|++|+|.+ ++.|++||+.++.. ++++.+++++..+++... .....+||||||||++
T Consensus 78 ~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~ 145 (490)
T PRK10938 78 LVSDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITALL-----------DRRFKYLSTGETRKTL 145 (490)
T ss_pred HhceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhhh-----------hCCcccCCHHHHHHHH
Confidence 27999998753 14599999876532 345566777777665322 3455689999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHHh
Q 000521 740 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 740 lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
||||+..+|+++||||||++||+...+++.+.+ .....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 146 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l-~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 224 (490)
T PRK10938 146 LCQALMSEPDLLILDEPFDGLDVASRQQLAELL-ASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQ 224 (490)
T ss_pred HHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHH-HHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999988763 3212347899999999998765 99999999999988776554321
Q ss_pred ccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcCcchhHhHHHHHhhhhHHHHH
Q 000521 819 SLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITL 898 (1446)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~ 898 (1446)
... . .+..+.
T Consensus 225 ~~~-----------------------------------------------~----~~~~~~------------------- 234 (490)
T PRK10938 225 QAL-----------------------------------------------V----AQLAHS------------------- 234 (490)
T ss_pred chh-----------------------------------------------h----hhhhhh-------------------
Confidence 000 0 000000
Q ss_pred HHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 899 VICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 978 (1446)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~v 978 (1446)
..+ ..
T Consensus 235 --------------------~~~-~~------------------------------------------------------ 239 (490)
T PRK10938 235 --------------------EQL-EG------------------------------------------------------ 239 (490)
T ss_pred --------------------hcc-Cc------------------------------------------------------
Confidence 000 00
Q ss_pred hcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 979 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1058 (1446)
Q Consensus 979 l~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~ 1058 (1446)
.
T Consensus 240 --------------------------~----------------------------------------------------- 240 (490)
T PRK10938 240 --------------------------V----------------------------------------------------- 240 (490)
T ss_pred --------------------------c-----------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000521 1059 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIAT 1138 (1446)
Q Consensus 1059 sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 1138 (1446)
T Consensus 241 -------------------------------------------------------------------------------- 240 (490)
T PRK10938 241 -------------------------------------------------------------------------------- 240 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCcc
Q 000521 1139 MAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGL 1218 (1446)
Q Consensus 1139 ~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~ 1218 (1446)
.... ..+... ....+ +....
T Consensus 241 --------~~~~------------------------------------------------~~~~~~-~~~~~---~~~~~ 260 (490)
T PRK10938 241 --------QLPE------------------------------------------------PDEPSA-RHALP---ANEPR 260 (490)
T ss_pred --------ccCc------------------------------------------------cccccc-ccccC---CCCce
Confidence 0000 000000 00000 01225
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-CCceEEEcCeeCCC-CChHhHhcce
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-CGGQILVDGLNIIN-TPVRDLRGRF 1296 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-~~G~I~IDG~di~~-i~~~~lR~~i 1296 (1446)
++++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+.++ ++|+|.+||.++.. .+....|+++
T Consensus 261 l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 338 (490)
T PRK10938 261 IVLNNGVVSYND--RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKHI 338 (490)
T ss_pred EEEeceEEEECC--eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhhc
Confidence 999999999964 3599999999999999999999999999999999998876 69999999987632 2334568899
Q ss_pred EEEeCCCCCCC---CcHHHhcCCC--C---CC--ChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000521 1297 AVVPQSPFLFE---GSLRDNLDPF--H---MN--DDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1365 (1446)
Q Consensus 1297 ~~VpQdp~lF~---gTIR~NLdp~--~---~~--~d~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LA 1365 (1446)
+++||++.++. .|+++++.+. . .. .+.+.. ....+.++.+|++. ........||||||||++||
T Consensus 339 ~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~la 413 (490)
T PRK10938 339 GYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQ-----KLAQQWLDILGIDKRTADAPFHSLSWGQQRLALIV 413 (490)
T ss_pred eEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHH-----HHHHHHHHHcCCchhhccCchhhCCHHHHHHHHHH
Confidence 99999986542 4677776421 1 01 011100 11223334446654 44555568999999999999
Q ss_pred HHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-C-cEEEEeccCchhHhh--cCEEEEEeCCEEEEEec
Q 000521 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK-G-MTVITIAHRISTVLN--MDEILILDHGHLVCISF 1434 (1446)
Q Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~-~-~TvI~IaHrl~ti~~--~DrIlvl~~G~vvE~~~ 1434 (1446)
||++++|++|||||||++||+++.+.+.+.|++..+ + .|||+|||+++.+.. ||+|++|++|++++.-.
T Consensus 414 ~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~~~ 486 (490)
T PRK10938 414 RALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRYVQ 486 (490)
T ss_pred HHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceEEeec
Confidence 999999999999999999999999999999987643 3 479999999999975 79999999999988643
No 79
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2e-60 Score=600.10 Aligned_cols=196 Identities=22% Similarity=0.262 Sum_probs=160.7
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
..++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ + .++
T Consensus 323 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~----------~~i 389 (556)
T PRK11819 323 KVIEAENLSKSFGD--RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-T----------VKL 389 (556)
T ss_pred eEEEEEeEEEEECC--eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-c----------eEE
Confidence 46999999999964 3699999999999999999999999999999999999999999999954 2 169
Q ss_pred EEEeCCC-CCCC-CcHHHhcCCCCCC-----ChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHh
Q 000521 1297 AVVPQSP-FLFE-GSLRDNLDPFHMN-----DDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARAL 1368 (1446)
Q Consensus 1297 ~~VpQdp-~lF~-gTIR~NLdp~~~~-----~d~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARAL 1368 (1446)
+|+||++ .++. -|+++|+...... .+.+..+ .++.+|+.. ........||||||||++||||+
T Consensus 390 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~---------~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al 460 (556)
T PRK11819 390 AYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRA---------YVGRFNFKGGDQQKKVGVLSGGERNRLHLAKTL 460 (556)
T ss_pred EEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHH---------HHHhCCCChhHhcCchhhCCHHHHHHHHHHHHH
Confidence 9999997 5665 4999998643211 1122222 334446643 23445568999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeC-CEEEEE-eccc
Q 000521 1369 LKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-GHLVCI-SFIC 1436 (1446)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~-G~vvE~-~~~~ 1436 (1446)
+.+|++|||||||++||..+.+.+.+.|++. + .|||+|||+++.+.. ||+|++|++ |++.++ |.+.
T Consensus 461 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~ 529 (556)
T PRK11819 461 KQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQ 529 (556)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHH
Confidence 9999999999999999999999999999875 4 499999999998875 899999996 898864 4433
No 80
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=5.6e-59 Score=639.99 Aligned_cols=545 Identities=19% Similarity=0.182 Sum_probs=400.4
Q ss_pred hHHHHHHHHHhHhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 264 SLVRAICCAYGYPYIC-LGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSK 341 (1446)
Q Consensus 264 ~l~~~l~~~~~~~~~~-~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r 341 (1446)
+.++..+++.++.... .+++.++..++....|+.++...+.-. +.......+. .+.+++..++..++.....+....
T Consensus 953 ~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~-~~iy~~l~i~~~~~~~~~~~~~~~ 1031 (1522)
T TIGR00957 953 SVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLR-LSVYGALGILQGFAVFGYSMAVSI 1031 (1522)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555443322 233444555666778888876665321 1111111221 122333333444444444455567
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHhHHHHHHH
Q 000521 342 LKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSG 420 (1446)
Q Consensus 342 ~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~ 420 (1446)
.+.+.-..+...+|+|.++.+...++..+.|+++|.++.|++.+..... .+..+...++.++.++.++.....+.+++.
T Consensus 1032 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~ 1111 (1522)
T TIGR00957 1032 GGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVII 1111 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888888889999999999999999999999999999999999998654 445555666666555544433333333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 421 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 500 (1446)
Q Consensus 421 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 500 (1446)
++++++...+..+..+..+..++...+.++...+..+|.++|+++||.||+|+.|.++..+..+...+..........+.
T Consensus 1112 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 1191 (1522)
T TIGR00957 1112 PPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWL 1191 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333333334444444455555566667777899999999999999999999998887776555444433322223332
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhh
Q 000521 501 VFFWATTPTLFSLFTFGLFAL-MGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 579 (1446)
Q Consensus 501 ~~~~~~~~~~~~~~~f~~~~~-~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~ 579 (1446)
.........+ .++..+.+.+ ..+.+++|.+..++.+...+..|+..+...+..+..+.+|.+||.+|++.++..+...
T Consensus 1192 ~~~~~~~~~~-~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~ 1270 (1522)
T TIGR00957 1192 AVRLECVGNC-IVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQI 1270 (1522)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Confidence 2221111111 1222233333 3467999999999999999999999999999999999999999999997654321100
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccC
Q 000521 580 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 659 (1446)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~ 659 (1446)
. ...+.. . -+.++.|+++|++|+|+++. +++|+|+||+|++||.++|||++|||||||+++|+|.++|
T Consensus 1271 ~-~~~~~~------~-wp~~g~I~f~nVsf~Y~~~~----~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~ 1338 (1522)
T TIGR00957 1271 Q-ETAPPS------G-WPPRGRVEFRNYCLRYREDL----DLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES 1338 (1522)
T ss_pred c-CCCCCC------C-CCCCCcEEEEEEEEEeCCCC----cccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC
Confidence 0 000000 0 02346799999999997532 2469999999999999999999999999999999999999
Q ss_pred CCcEEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCC
Q 000521 660 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 726 (1446)
Q Consensus 660 ~~G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~ 726 (1446)
++|+|.++| +|+||||+|.||+|||||||....+++++...++++.|++++.++.+|+|.+|++||+
T Consensus 1339 ~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1339 AEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred CCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 999999987 5999999999999999999983336888899999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCE
Q 000521 727 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 806 (1446)
Q Consensus 727 g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 806 (1446)
|.+||||||||++||||++++|+|+|||||||+||+++++.|.+. +.. ..+++|+|+|+||++.+..||+|++|++|+
T Consensus 1419 G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~-l~~-~~~~~TvI~IAHRl~ti~~~DrIlVld~G~ 1496 (1522)
T TIGR00957 1419 GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQST-IRT-QFEDCTVLTIAHRLNTIMDYTRVIVLDKGE 1496 (1522)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999888776 443 567899999999999999999999999999
Q ss_pred EEEecChhHHHhccccCc
Q 000521 807 VKWIGSSADLAVSLYSGF 824 (1446)
Q Consensus 807 i~~~g~~~~l~~~~~~~~ 824 (1446)
|++.|+|+|++++++.+.
T Consensus 1497 IvE~G~~~eLl~~~~~f~ 1514 (1522)
T TIGR00957 1497 VAEFGAPSNLLQQRGIFY 1514 (1522)
T ss_pred EEEECCHHHHHhCCCHHH
Confidence 999999999987654443
No 81
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=3.9e-60 Score=597.53 Aligned_cols=470 Identities=22% Similarity=0.288 Sum_probs=326.5
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--eEEEEcCCCC
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPW 678 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~--~i~yv~Q~p~ 678 (1446)
.++++|++++|+.. +++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.+++ .||||+|+|+
T Consensus 4 ~i~~~nls~~~~~~-----~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~ 78 (552)
T TIGR03719 4 IYTMNRVSKVVPPK-----KEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQ 78 (552)
T ss_pred EEEEeeEEEecCCC-----CeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCC
Confidence 47899999998521 2359999999999999999999999999999999999999999999874 6999999999
Q ss_pred CCC-ccHHHHHhcCCC-------------------CC--------hhhHHHHHHHhcchH---H----HhhccCCCcccc
Q 000521 679 ILS-GTIRDNILFGKN-------------------YD--------PQSYSETLKACTLDV---D----ISLMVGGDMAYI 723 (1446)
Q Consensus 679 l~~-~ti~~nI~~g~~-------------------~~--------~~~~~~v~~~~~l~~---d----i~~~~~gd~t~i 723 (1446)
+++ .|++|||.++.. .+ .+++.++++.++... . ++.+ |.. ..
T Consensus 79 ~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~-~~ 155 (552)
T TIGR03719 79 LDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL--RCP-PW 155 (552)
T ss_pred CCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC--CCC-cc
Confidence 875 599999987521 01 012344444554321 1 1111 111 12
Q ss_pred cCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEE
Q 000521 724 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVM 802 (1446)
Q Consensus 724 g~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l 802 (1446)
.....+|||||||||+||||++.+|+++||||||++||+.+.+++.+. +.. . +.|+|+|||+++.+.. ||+|++|
T Consensus 156 ~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~-L~~-~--~~tvIiisHd~~~~~~~~d~v~~l 231 (552)
T TIGR03719 156 DADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQH-LQE-Y--PGTVVAVTHDRYFLDNVAGWILEL 231 (552)
T ss_pred cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHH-HHh-C--CCeEEEEeCCHHHHHhhcCeEEEE
Confidence 456779999999999999999999999999999999999999988876 332 2 3599999999999876 9999999
Q ss_pred eCCEEE-EecChhHHHhccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcCcch
Q 000521 803 DKGQVK-WIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVE 881 (1446)
Q Consensus 803 ~~G~i~-~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~ 881 (1446)
++|+++ ..|+++++..... ... + ....+.+..+.
T Consensus 232 ~~g~i~~~~g~~~~~~~~~~-----------------~~~---------~---------------~~~~~~~~~~~---- 266 (552)
T TIGR03719 232 DRGRGIPWEGNYSSWLEQKE-----------------KRL---------E---------------QEEKEESARQK---- 266 (552)
T ss_pred ECCEEEEecCCHHHHHHHHH-----------------HHH---------H---------------HHHHHHHHHHH----
Confidence 999975 6788877643100 000 0 00000000000
Q ss_pred hHhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 882 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 961 (1446)
Q Consensus 882 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 961 (1446)
.+.. ...|....
T Consensus 267 ------~~~~--------------------------~~~~~~~~------------------------------------ 278 (552)
T TIGR03719 267 ------ALKR--------------------------ELEWVRSS------------------------------------ 278 (552)
T ss_pred ------HHHH--------------------------HHHHHHhh------------------------------------
Confidence 0000 00000000
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHH
Q 000521 962 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1041 (1446)
Q Consensus 962 ~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1041 (1446)
+
T Consensus 279 --------------------~----------------------------------------------------------- 279 (552)
T TIGR03719 279 --------------------P----------------------------------------------------------- 279 (552)
T ss_pred --------------------h-----------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 000521 1042 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1121 (1446)
Q Consensus 1042 ~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1121 (1446)
.. ++ + +. +.
T Consensus 280 ---------------~~-~~-------~-----------------------------~~--------~~----------- 288 (552)
T TIGR03719 280 ---------------KA-RQ-------A-----------------------------KS--------KA----------- 288 (552)
T ss_pred ---------------hh-HH-------H-----------------------------HH--------HH-----------
Confidence 00 00 0 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH-hcCCc
Q 000521 1122 SLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY-MDVPQ 1200 (1446)
Q Consensus 1122 ~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~-~~~~~ 1200 (1446)
.....++..+. ...++
T Consensus 289 ---------------------------------------------------------------~~~~~~~~~~~~~~~~~ 305 (552)
T TIGR03719 289 ---------------------------------------------------------------RLARYEELLSQEFQKRN 305 (552)
T ss_pred ---------------------------------------------------------------HHHHHHhhhhhcccccC
Confidence 00000000000 00000
Q ss_pred cccccCCCCCCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEc
Q 000521 1201 EELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD 1280 (1446)
Q Consensus 1201 e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ID 1280 (1446)
+... ...+...-+.+..++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++
T Consensus 306 ~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~ 382 (552)
T TIGR03719 306 ETAE-IYIPPGPRLGDKVIEAENLSKGFGD--KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIG 382 (552)
T ss_pred CCce-eecCCCCCCCCeEEEEeeEEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEEC
Confidence 0000 0000000011235999999999964 369999999999999999999999999999999999999999999995
Q ss_pred CeeCCCCChHhHhcceEEEeCCCC-CCC-CcHHHhcCCCCC---CC--hHHHHHHHHHccHHHHHHhCCCch-hhhcCCC
Q 000521 1281 GLNIINTPVRDLRGRFAVVPQSPF-LFE-GSLRDNLDPFHM---ND--DLKIWSVLEKCHVKEEVEAVGLET-FVKESGI 1352 (1446)
Q Consensus 1281 G~di~~i~~~~lR~~i~~VpQdp~-lF~-gTIR~NLdp~~~---~~--d~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G~ 1352 (1446)
+ + .+|+|+||++. +++ -|+++|+..... .. +.+.. +.++.+|++. .......
T Consensus 383 ~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~---------~~l~~~~l~~~~~~~~~~ 442 (552)
T TIGR03719 383 E-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSR---------AYVGRFNFKGSDQQKKVG 442 (552)
T ss_pred C-c----------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHH---------HHHHhCCCChhHhcCchh
Confidence 4 2 16999999973 665 499999965321 11 11122 2344446643 2345556
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeC-CEEE
Q 000521 1353 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-GHLV 1430 (1446)
Q Consensus 1353 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~-G~vv 1430 (1446)
.||||||||++||||++.+|++|||||||++||..+.+.+.+.|++. . .|||+|||+++.+.. ||+|++|++ |+++
T Consensus 443 ~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~d~i~~l~~~~~~~ 520 (552)
T TIGR03719 443 QLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GCAVVISHDRWFLDRIATHILAFEGDSHVE 520 (552)
T ss_pred hCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhCCEEEEEECCCeEE
Confidence 89999999999999999999999999999999999999999999876 3 499999999999876 899999997 6888
Q ss_pred EEe
Q 000521 1431 CIS 1433 (1446)
Q Consensus 1431 E~~ 1433 (1446)
+++
T Consensus 521 ~~~ 523 (552)
T TIGR03719 521 WFE 523 (552)
T ss_pred EeC
Confidence 653
No 82
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1e-58 Score=536.88 Aligned_cols=511 Identities=23% Similarity=0.285 Sum_probs=407.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcc--CCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000521 287 NDSIGFAGPLLLNKLIKFLQQ--GSG--HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVR 362 (1446)
Q Consensus 287 ~~~~~~~~P~ll~~li~~~~~--~~~--~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy~K~L~l~ 362 (1446)
.-.+...+|++++.+++.+.. ..+ .......+.+++++.++.++++-........+..++-......+|++.+.++
T Consensus 42 aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld 121 (591)
T KOG0057|consen 42 AKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLD 121 (591)
T ss_pred hhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 345677899999999998864 222 2233456667777788888888888888888888888889999999999999
Q ss_pred ccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 000521 363 LAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITIL-LIPVNKWIANLIAN 440 (1446)
Q Consensus 363 ~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v~~~-~~~~~~~~~~~~~~ 440 (1446)
.+.+.+..+|++.+.|.--...+..... .+..+....+++.++...+++..|.+..+...+.+. .......++.+-.+
T Consensus 122 ~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~ 201 (591)
T KOG0057|consen 122 LSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNR 201 (591)
T ss_pred HHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHH
Confidence 9999889999999999888888887654 456777788899998989999999876554433333 33344455666678
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000521 441 ATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLF- 519 (1446)
Q Consensus 441 ~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~- 519 (1446)
.+++.+++.++..+..-+.|.|-.+||.|+-|+...++....-.+--+...+.....++..+.... .+....++..|
T Consensus 202 fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~--iFsv~~~~im~l 279 (591)
T KOG0057|consen 202 FRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKA--IFSVALTFIMVL 279 (591)
T ss_pred HHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHH--HHHHHHHHHHHH
Confidence 889999999999999999999999999999999998888765322222222222222222222111 11122223333
Q ss_pred ---HHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCccCC
Q 000521 520 ---ALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFN 596 (1446)
Q Consensus 520 ---~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~ 596 (1446)
-+.++.+|.+...-..+++.+|..|+..|...+..+.++..-++-.....+.++ + . +....|. .
T Consensus 280 ~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~--~-i-~~~~~~i---------~ 346 (591)
T KOG0057|consen 280 GSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDE--D-I-QEAALPI---------E 346 (591)
T ss_pred HhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhh--h-h-hhccCCc---------c
Confidence 245568999999999999999999999999999988888877765543332111 1 1 1100111 1
Q ss_pred CCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--------
Q 000521 597 SKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------- 668 (1446)
Q Consensus 597 ~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-------- 668 (1446)
..+..|+|+|++|+|.+ .+++|+++||+|++||.++|+|+|||||||++++|+++++ .+|+|.++|
T Consensus 347 ~~~~~I~F~dV~f~y~~-----k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~ 420 (591)
T KOG0057|consen 347 LFGGSIEFDDVHFSYGP-----KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSL 420 (591)
T ss_pred cCCCcEEEEeeEEEeCC-----CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhCh
Confidence 23456999999999963 2446999999999999999999999999999999999999 999999998
Q ss_pred -----eEEEEcCCCCCCCccHHHHHhcCCCC-ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHH
Q 000521 669 -----SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 742 (1446)
Q Consensus 669 -----~i~yv~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lAR 742 (1446)
.||||||+..|||.||.+||.+|++. .+++..++++..++++-+..+|+|++|.+||+|..|||||||||+|||
T Consensus 421 ~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaR 500 (591)
T KOG0057|consen 421 ESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLAR 500 (591)
T ss_pred HHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHH
Confidence 49999999999999999999999874 566777788888999999999999999999999999999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHhcc
Q 000521 743 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSL 820 (1446)
Q Consensus 743 aly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~ 820 (1446)
|+.+||+|+++|||||+||.+|++.+++. +.+ ...+||+|+|.||++.++.+|+|+++++|++.+.|+++|++...
T Consensus 501 a~lKda~Il~~DEaTS~LD~~TE~~i~~~-i~~-~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s 576 (591)
T KOG0057|consen 501 AFLKDAPILLLDEATSALDSETEREILDM-IMD-VMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPS 576 (591)
T ss_pred HHhcCCCeEEecCcccccchhhHHHHHHH-HHH-hcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhh
Confidence 99999999999999999999999999998 444 67899999999999999999999999999999999999998743
No 83
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2e-60 Score=528.77 Aligned_cols=451 Identities=25% Similarity=0.341 Sum_probs=339.8
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEeC------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~-----~~G~i~~~~------ 668 (1446)
..+.++|.+.++.... ....++++|||++++||.+++||.||||||-..++++|+++. -+|+|..+|
T Consensus 5 ~lL~v~nLsV~f~~~~--~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~ 82 (534)
T COG4172 5 PLLSIRNLSVAFHQEG--GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAA 82 (534)
T ss_pred cceeeeccEEEEecCC--cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcC
Confidence 3467888888776543 234579999999999999999999999999999999999975 367888776
Q ss_pred -----------eEEEEcCCCCC-CCc--cHHHHH----hcCCCCC----hhhHHHHHHHhcchHHHhhccCCCcccccCC
Q 000521 669 -----------SIAYVPQVPWI-LSG--TIRDNI----LFGKNYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEK 726 (1446)
Q Consensus 669 -----------~i~yv~Q~p~l-~~~--ti~~nI----~~g~~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~ 726 (1446)
+|+.++|+|-- .|- ||-.-| ...+..+ +++..+.++..++.+- ...+...
T Consensus 83 se~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p--------~~rl~~y 154 (534)
T COG4172 83 SERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEP--------EKRLDAY 154 (534)
T ss_pred CHHHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCch--------hhhhhhC
Confidence 69999999952 232 655444 4444333 2344555555655431 1234556
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCC
Q 000521 727 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKG 805 (1446)
Q Consensus 727 g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G 805 (1446)
...|||||||||-||.||..+|++||-||||.|||..+..+|++.+-.-....|..+++|||++..++. ||+|+||.+|
T Consensus 155 PHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G 234 (534)
T COG4172 155 PHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHG 234 (534)
T ss_pred CcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEecc
Confidence 679999999999999999999999999999999999999999986322113346799999999999987 9999999999
Q ss_pred EEEEecChhHHHhccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcCcchhHhH
Q 000521 806 QVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVY 885 (1446)
Q Consensus 806 ~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 885 (1446)
+++|.|+.+++...... .|
T Consensus 235 ~ivE~~~t~~lF~~PqH-------------------------------------------------------------pY 253 (534)
T COG4172 235 EIVETGTTETLFAAPQH-------------------------------------------------------------PY 253 (534)
T ss_pred EEeecCcHHHHhhCCCC-------------------------------------------------------------hH
Confidence 99998876554321000 00
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 886 KNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLR 965 (1446)
Q Consensus 886 ~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 965 (1446)
.+
T Consensus 254 ---Tr--------------------------------------------------------------------------- 255 (534)
T COG4172 254 ---TR--------------------------------------------------------------------------- 255 (534)
T ss_pred ---HH---------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHH
Q 000521 966 AAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFW 1045 (1446)
Q Consensus 966 ~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~ 1045 (1446)
T Consensus 256 -------------------------------------------------------------------------------- 255 (534)
T COG4172 256 -------------------------------------------------------------------------------- 255 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 000521 1046 FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRL 1125 (1446)
Q Consensus 1046 ~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l 1125 (1446)
+
T Consensus 256 ---------------~---------------------------------------------------------------- 256 (534)
T COG4172 256 ---------------K---------------------------------------------------------------- 256 (534)
T ss_pred ---------------H----------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCcccccc
Q 000521 1126 QLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCG 1205 (1446)
Q Consensus 1126 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~ 1205 (1446)
+++ .|+..
T Consensus 257 ---------------------------------------------------------------------Ll~--aeP~g- 264 (534)
T COG4172 257 ---------------------------------------------------------------------LLA--AEPSG- 264 (534)
T ss_pred ---------------------------------------------------------------------HHh--cCCCC-
Confidence 000 00000
Q ss_pred CCCCCCCCCCCccEEEEEEEEEecCC---------CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCce
Q 000521 1206 YQSLSPDWPFQGLIEFQNVTMRYKPS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQ 1276 (1446)
Q Consensus 1206 ~~~~~~~wp~~g~I~f~nVs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~ 1276 (1446)
..+|..-...--++.+||...|+-. .-.+.++|||+.++||.+||||+||||||||-.+|+|+++++ |+
T Consensus 265 -~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~ 342 (534)
T COG4172 265 -DPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GE 342 (534)
T ss_pred -CCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ce
Confidence 0111111122357777887777422 124799999999999999999999999999999999999976 99
Q ss_pred EEEcCeeCCCCChHh---HhcceEEEeCCCC--CCC-CcHHHhcC----CCC-CC----ChHHHHHHHHHccHHHHHHhC
Q 000521 1277 ILVDGLNIINTPVRD---LRGRFAVVPQSPF--LFE-GSLRDNLD----PFH-MN----DDLKIWSVLEKCHVKEEVEAV 1341 (1446)
Q Consensus 1277 I~IDG~di~~i~~~~---lR~~i~~VpQdp~--lF~-gTIR~NLd----p~~-~~----~d~ei~~aL~~~~L~~~i~~l 1341 (1446)
|..+|.||...+.++ +|+++-+|.|||+ |=+ .||-+-+. -.. .. .|+.+.+||+.+||+...
T Consensus 343 I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~--- 419 (534)
T COG4172 343 IRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPAT--- 419 (534)
T ss_pred EEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhH---
Confidence 999999999888776 5799999999997 222 25544442 111 11 245567777777654432
Q ss_pred CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-c
Q 000521 1342 GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-M 1418 (1446)
Q Consensus 1342 gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~ 1418 (1446)
...-...|||||||||+||||+.-+|++++||||||+||......|.+.+++.- .+-+-++|+|+|..++. |
T Consensus 420 -----r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~ 494 (534)
T COG4172 420 -----RNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRALC 494 (534)
T ss_pred -----hhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhh
Confidence 234456799999999999999999999999999999999999999999998753 47799999999999985 9
Q ss_pred CEEEEEeCCEEEEEeccchhhh
Q 000521 1419 DEILILDHGHLVCISFICRYFI 1440 (1446)
Q Consensus 1419 DrIlvl~~G~vvE~~~~~~~~~ 1440 (1446)
|+|+||.+|+|||.|.-...|.
T Consensus 495 ~~viVm~~GkiVE~G~~~~if~ 516 (534)
T COG4172 495 HRVIVMRDGKIVEQGPTEAVFA 516 (534)
T ss_pred ceEEEEeCCEEeeeCCHHHHhc
Confidence 9999999999999999887774
No 84
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-59 Score=591.70 Aligned_cols=198 Identities=22% Similarity=0.329 Sum_probs=160.9
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
..|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+++. .++
T Consensus 311 ~~l~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 311 PLLKMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred ceEEEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 36999999999964 46999999999999999999999999999999999999999999999741 269
Q ss_pred EEEeCCC--CCCC-CcHHHhcCCC-CCCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHhccC
Q 000521 1297 AVVPQSP--FLFE-GSLRDNLDPF-HMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKS 1371 (1446)
Q Consensus 1297 ~~VpQdp--~lF~-gTIR~NLdp~-~~~~d~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALLr~ 1371 (1446)
+|+||++ .+.. .|+.+|+... ....++++.+.|+. +|+.. ........||||||||++||||++++
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~---------~~l~~~~~~~~~~~LSgGekqRl~La~~l~~~ 448 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGG---------FGFQGDKVTEETRRFSGGEKARLVLALIVWQR 448 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHH---------cCCChhHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 9999985 2443 3787776321 11122333344443 35532 34445567999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEE-Eeccchh
Q 000521 1372 SKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVC-ISFICRY 1438 (1446)
Q Consensus 1372 ~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE-~~~~~~~ 1438 (1446)
|++|||||||++||..+...+.+.|++. . .|||+|||+++.+.. ||+|++|++|++++ .|.+..|
T Consensus 449 p~lLlLDEPt~~LD~~~~~~l~~~L~~~-~-gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~ 515 (638)
T PRK10636 449 PNLLLLDEPTNHLDLDMRQALTEALIDF-E-GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDY 515 (638)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHH
Confidence 9999999999999999999999999875 4 599999999999875 89999999999984 5666544
No 85
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2e-57 Score=613.69 Aligned_cols=210 Identities=20% Similarity=0.284 Sum_probs=173.4
Q ss_pred cEEEEEEEEEecC-----------CCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEEcCeeC
Q 000521 1218 LIEFQNVTMRYKP-----------SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNI 1284 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~-----------~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~--~~G~I~IDG~di 1284 (1446)
.+.|+||++.++. +...+|+|+|++++|||.+||+|+||||||||+++|.|..++ .+|+|.+||.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 6999999998852 123699999999999999999999999999999999999763 689999999886
Q ss_pred CCCChHhHhcceEEEeCCCCCCCC-cHHHhcCCCC------CCChH----HHHHHHHHccHHHHHHhCCCchhhhcCC-C
Q 000521 1285 INTPVRDLRGRFAVVPQSPFLFEG-SLRDNLDPFH------MNDDL----KIWSVLEKCHVKEEVEAVGLETFVKESG-I 1352 (1446)
Q Consensus 1285 ~~i~~~~lR~~i~~VpQdp~lF~g-TIR~NLdp~~------~~~d~----ei~~aL~~~~L~~~i~~lgLdt~v~e~G-~ 1352 (1446)
. ...+|+.++||+|++.+++. |+||||.+.. ..+++ .+.++++..+|.+. .|+.+|..+ .
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-----~~~~vg~~~~~ 1018 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-----KDAIVGLPGVT 1018 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-----hCCccCCCCCC
Confidence 4 34567889999999988764 9999996421 12222 24455666655443 356665433 4
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchh--HhhcCEEEEEeC-CE
Q 000521 1353 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST--VLNMDEILILDH-GH 1428 (1446)
Q Consensus 1353 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~t--i~~~DrIlvl~~-G~ 1428 (1446)
.||||||||++|||||+.+|+||+||||||+||+.+...+.+.|++.. +++|||+++|+++. ...||++++|++ |+
T Consensus 1019 ~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~ 1098 (1470)
T PLN03140 1019 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1098 (1470)
T ss_pred CcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCE
Confidence 699999999999999999999999999999999999999999998864 48999999999984 356999999996 89
Q ss_pred EEEEecc
Q 000521 1429 LVCISFI 1435 (1446)
Q Consensus 1429 vvE~~~~ 1435 (1446)
++.+|.+
T Consensus 1099 ~v~~G~~ 1105 (1470)
T PLN03140 1099 VIYSGPL 1105 (1470)
T ss_pred EEEECCc
Confidence 9999986
No 86
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.1e-56 Score=519.92 Aligned_cols=538 Identities=20% Similarity=0.240 Sum_probs=390.2
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 266 VRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSG--HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 343 (1446)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~--~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~ 343 (1446)
++...+ .++.++..+++.++..+....-=++-..+|..-.-... ....++.+++.=+..++.++..+.-........
T Consensus 8 i~l~~~-~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~At 86 (573)
T COG4987 8 LRLYKR-HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYIFNVMLPSAGVRGLAILRTAARYVERLVSHDAT 86 (573)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 344444 56666666655554433333222222333322111111 122333344444566777777666666677888
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHhhHhHHHHHHHH
Q 000521 344 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAW--SLPFQIGVALYLLYTQVKFAFVSGL 421 (1446)
Q Consensus 344 ~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~--~~pl~i~i~~~lL~~~lg~a~l~~~ 421 (1446)
.++-+.+.-.+|+|....+.........|++.|.+..|++.+++...-...-| +..+.+++.+.+-+..++.+.+.++
T Consensus 87 frvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~~ 166 (573)
T COG4987 87 FRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLGL 166 (573)
T ss_pred HHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999999999999998888888999999999999999999765433322 2222333344444667777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 422 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 501 (1446)
Q Consensus 422 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 501 (1446)
...+..+.+...+.+.-++..+...+.+..--+.+.+.+.|....+++|.++.+.+.+++.-..-.+..++...+..+..
T Consensus 167 ~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~ 246 (573)
T COG4987 167 ILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSD 246 (573)
T ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666655666666666666677777777777888999999999999999999888776643333333333333333333
Q ss_pred HHHHHHHHHH---HHHHHHHHHHhCCCCC-HhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCCCch
Q 000521 502 FFWATTPTLF---SLFTFGLFALMGHQLD-AAMVFTCLALFNSLISPLNS-FPWVINGLIDAFISIRRLTRFLGCSEYKH 576 (1446)
Q Consensus 502 ~~~~~~~~~~---~~~~f~~~~~~~~~Lt-~~~~ft~l~l~~~l~~pl~~-l~~~i~~~~~a~~s~~RI~~fL~~~e~~~ 576 (1446)
++......+. .++|++.-. ..|..+ +..+...+..|..+. |+.. .|.++..+.+...|.+|+.+.++.++...
T Consensus 247 a~~~l~~g~~v~~~l~w~a~~~-~~G~~~~~~aa~~ll~~f~~~e-af~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~ 324 (573)
T COG4987 247 AILLLIAGLLVIGLLLWMAAQV-GAGALAQPGAALALLVIFAALE-AFEPLAPGAFQHLGQVIASARRLNDILDQKPEVT 324 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-cCCCcchhHHHHHHHHHHHHHH-HHhhhcchhHHHhhHHHHHHHHHhhhccCCcccC
Confidence 3322221111 122222211 123344 222222222233332 2222 23677888999999999999887654322
Q ss_pred hhhhhcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcC
Q 000521 577 ELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGE 656 (1446)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~ 656 (1446)
.. . ... ...+..++++|++|+|+..+ .++|+|+||++++||.++|+|+||||||||++.+.|.
T Consensus 325 ~~-~-~~~-----------~~~~~~l~~~~vsF~y~~~~----~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~ 387 (573)
T COG4987 325 FP-D-EQT-----------ATTGQALELRNVSFTYPGQQ----TKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGA 387 (573)
T ss_pred CC-c-ccc-----------CCccceeeeccceeecCCCc----cchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhc
Confidence 11 0 000 11222789999999997542 3469999999999999999999999999999999999
Q ss_pred ccCCCcEEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCCC-ChhhHHHHHHHhcchHHHhhccCCCccc
Q 000521 657 MMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAY 722 (1446)
Q Consensus 657 ~~~~~G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~~~~gd~t~ 722 (1446)
++|++|+|..+| .+++++|.+.+|++|+|||+..+++- ++|...++++..+|++-++..|+|.+|.
T Consensus 388 ~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~ 467 (573)
T COG4987 388 WDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTW 467 (573)
T ss_pred cCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhch
Confidence 999999999987 58999999999999999999999864 6788999999999999999999999999
Q ss_pred ccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEE
Q 000521 723 IGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVM 802 (1446)
Q Consensus 723 ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l 802 (1446)
+||+|..||||||||++|||++.+|+++++|||||.+||+.|++++++. +.. ..+|||+|+||||+..++.+|+|++|
T Consensus 468 lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~l-l~~-~~~~kTll~vTHrL~~le~~drIivl 545 (573)
T COG4987 468 LGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLAL-LFE-HAEGKTLLMVTHRLRGLERMDRIIVL 545 (573)
T ss_pred hccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHH-HHH-HhcCCeEEEEecccccHhhcCEEEEE
Confidence 9999999999999999999999999999999999999999999999987 444 67899999999999999999999999
Q ss_pred eCCEEEEecChhHHHhccccCcc
Q 000521 803 DKGQVKWIGSSADLAVSLYSGFW 825 (1446)
Q Consensus 803 ~~G~i~~~g~~~~l~~~~~~~~~ 825 (1446)
++|+++++|+|.+++.+++.+.+
T Consensus 546 ~~Gkiie~G~~~~Ll~~~g~~~~ 568 (573)
T COG4987 546 DNGKIIEEGTHAELLANNGRYKR 568 (573)
T ss_pred ECCeeeecCCHHhhhccccHHHH
Confidence 99999999999999886655443
No 87
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6e-57 Score=583.48 Aligned_cols=536 Identities=22% Similarity=0.250 Sum_probs=393.5
Q ss_pred HhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCC-CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 883 TVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSS-QTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 961 (1446)
Q Consensus 883 ~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~-~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~ 961 (1446)
++.+.-++..+|.++...++..+.. ......+..+....+..... .+......|..+.++..++.+++.....+....
T Consensus 190 sl~~al~~~f~~~~~~~~~~~~~~~-~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~ 268 (1381)
T KOG0054|consen 190 SLLRALLRTFGRTFLLSGIFLFLRD-LAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFR 268 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 4455555555555544443333333 33566677777666543322 122223445555556666666666666666777
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHH
Q 000521 962 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1041 (1446)
Q Consensus 962 ~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1041 (1446)
.+.|....+-..+++|.++..-+--..++.|+|+|-++.|.+.+++..+.....+...+-.+++...+.-...+..+ +.
T Consensus 269 ~g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~-~G 347 (1381)
T KOG0054|consen 269 VGMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSAL-AG 347 (1381)
T ss_pred hhhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHH-HH
Confidence 88888888899999999999988888889999999999999999998888777776655544443333222222211 11
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 000521 1042 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1121 (1446)
Q Consensus 1042 ~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl 1121 (1446)
+.+++++.-++.+..+..+..++.....+..-....+|.++|+++||.|+||+.|.++..+.-+.-.+...+....+...
T Consensus 348 ~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~ 427 (1381)
T KOG0054|consen 348 VAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALN 427 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11222222223232333333333333333344467899999999999999999999998776554444433333333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCcc
Q 000521 1122 SLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQE 1201 (1446)
Q Consensus 1122 ~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e 1201 (1446)
..... ....++.++.+.+... ...+..++..+..++++.-.+..++..+......+-++.+|++|+.+|+..++.
T Consensus 428 ~~~~~-~~p~lv~~~tF~~~v~----~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~ 502 (1381)
T KOG0054|consen 428 SFLNF-FSPVLVSVVTFVVFVL----LLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEEL 502 (1381)
T ss_pred HHHHH-HHHHHHHHHHHHHHhh----ccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 22211 1122222222222110 112345677777788888888888888888888888999999999999976543
Q ss_pred ccccCCCCCCCCCCCccEEEEEEEEEecCC-CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEc
Q 000521 1202 ELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD 1280 (1446)
Q Consensus 1202 ~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ID 1280 (1446)
+...... .+.-+.+-.|+++|.+|+++++ .++.|+||||+|++||.+||||++|||||||+++|+|-++..+|++.++
T Consensus 503 ~~~~~~~-~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~ 581 (1381)
T KOG0054|consen 503 DPDSVER-SPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVN 581 (1381)
T ss_pred Ccccccc-CCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEc
Confidence 3211111 1222345579999999999864 4459999999999999999999999999999999999999999999998
Q ss_pred CeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhH
Q 000521 1281 GLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1358 (1446)
Q Consensus 1281 G~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQ 1358 (1446)
|. ++||||.|++|+|||||||.++.+++++...++++.|+|++.++.+ |-.|+|||+|.||||||
T Consensus 582 gs-------------iaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQ 648 (1381)
T KOG0054|consen 582 GS-------------VAYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQ 648 (1381)
T ss_pred Ce-------------EEEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhH
Confidence 73 9999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeccCCCCCHHHHHH-HHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccch
Q 000521 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASI-LQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1359 rQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~-Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
||||+||||++++++|++||+|.|+||+++.+. ++++|+...++||+|.|||+++.+.+||+|+||++|+|+|.|++..
T Consensus 649 KqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~e 728 (1381)
T KOG0054|consen 649 KQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEE 728 (1381)
T ss_pred HHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHH
Confidence 999999999999999999999999999999875 5678888889999999999999999999999999999999999987
Q ss_pred hh
Q 000521 1438 YF 1439 (1446)
Q Consensus 1438 ~~ 1439 (1446)
+.
T Consensus 729 l~ 730 (1381)
T KOG0054|consen 729 LL 730 (1381)
T ss_pred HH
Confidence 65
No 88
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.3e-56 Score=611.89 Aligned_cols=476 Identities=18% Similarity=0.198 Sum_probs=358.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHH
Q 000521 343 KLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGL 421 (1446)
Q Consensus 343 ~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~ 421 (1446)
+.+....+...+|++.++.+...+++.+.|+++|.++.|++.+.+.+. .+..+....+.++.++.++.....+.+++.+
T Consensus 1026 ~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i 1105 (1560)
T PTZ00243 1026 MRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALV 1105 (1560)
T ss_pred HHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445677899999999999999999999999999999999998654 3455555555555444443333223333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 422 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 501 (1446)
Q Consensus 422 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 501 (1446)
+++++...+..++.+..+..++......+.-.+.++|.++|+++||.|+.|+.+.++..+.-+...+...+......+..
T Consensus 1106 ~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~ 1185 (1560)
T PTZ00243 1106 PCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLG 1185 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223333344455555666666667777788999999999999999999999888876654444443332222222222
Q ss_pred HHHHHH--HHHHHHHHHHHH--HHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCch-
Q 000521 502 FFWATT--PTLFSLFTFGLF--ALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH- 576 (1446)
Q Consensus 502 ~~~~~~--~~~~~~~~f~~~--~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~- 576 (1446)
...... ...+.++.++++ ....+.++++.+..++.+...+..|+..+...+..+..++.|++||.+|++..+.++
T Consensus 1186 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~ 1265 (1560)
T PTZ00243 1186 VRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDM 1265 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 211111 111112222222 222345789988888888899999999999999999999999999999996422111
Q ss_pred -hhhh-------hcCCCCc------ccCC--C--ccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEE
Q 000521 577 -ELEQ-------AANSPSY------ISNG--L--SNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAV 638 (1446)
Q Consensus 577 -~~~~-------~~~~~~~------~~~~--~--~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~i 638 (1446)
.... ....+.+ .... . .......+.|+|+|++|+|+++. +++|+|+||+|++||.++|
T Consensus 1266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~----~~vL~~vsf~I~~GekVaI 1341 (1560)
T PTZ00243 1266 PELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGL----PLVLRGVSFRIAPREKVGI 1341 (1560)
T ss_pred ccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCC----CceeecceEEECCCCEEEE
Confidence 0000 0000000 0000 0 00011235799999999996431 3469999999999999999
Q ss_pred EcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHH
Q 000521 639 IGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKA 705 (1446)
Q Consensus 639 vG~~GsGKStll~~llg~~~~~~G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~ 705 (1446)
||++|||||||+++|+|.++|++|+|.++| .|+||||+|.||+|||||||..+.+++++...++++.
T Consensus 1342 VGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~ 1421 (1560)
T PTZ00243 1342 VGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALEL 1421 (1560)
T ss_pred ECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHH
Confidence 999999999999999999999999999987 5999999999999999999987778889999999999
Q ss_pred hcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccC-CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEE
Q 000521 706 CTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG-SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRI 784 (1446)
Q Consensus 706 ~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~-~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~i 784 (1446)
|++++.++.+|+|.+|.+||+|.+||||||||++||||++++ |+|+|||||||+||+++++.|.+. +.. ..+++|+|
T Consensus 1422 a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~-L~~-~~~~~TvI 1499 (1560)
T PTZ00243 1422 VGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQAT-VMS-AFSAYTVI 1499 (1560)
T ss_pred CCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HCCCCEEE
Confidence 999999999999999999999999999999999999999996 899999999999999999998776 443 45789999
Q ss_pred EEccCcchhhhCCEEEEEeCCEEEEecChhHHHhc-cccCc
Q 000521 785 LCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS-LYSGF 824 (1446)
Q Consensus 785 lvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~-~~~~~ 824 (1446)
+|+||++.+..||+|++|++|+|++.|+++|++++ ++.+.
T Consensus 1500 ~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~ 1540 (1560)
T PTZ00243 1500 TIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFH 1540 (1560)
T ss_pred EEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHH
Confidence 99999999999999999999999999999999864 34443
No 89
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.3e-57 Score=582.00 Aligned_cols=198 Identities=23% Similarity=0.326 Sum_probs=161.5
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+ |.++ +|+
T Consensus 319 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 5899999999964 36999999999999999999999999999999999999999999999 4332 599
Q ss_pred EEeCCC-CCCCC-cHHHhcCCCCC-C--C--hHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHhc
Q 000521 1298 VVPQSP-FLFEG-SLRDNLDPFHM-N--D--DLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1369 (1446)
Q Consensus 1298 ~VpQdp-~lF~g-TIR~NLdp~~~-~--~--d~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL 1369 (1446)
|++|++ .+++. |+++|+..... . . +.++.+ .+..+|+.. ........||||||||++||||++
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~---------~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al~ 456 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLG---------YLQDFLFHPKRAMTPVKALSGGERNRLLLARLFL 456 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchHHHHHH---------HHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHHh
Confidence 999986 46654 99999964321 1 1 122222 333345532 334445579999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEe-CCEEEEEeccchhhhh
Q 000521 1370 KSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD-HGHLVCISFICRYFIF 1441 (1446)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~-~G~vvE~~~~~~~~~~ 1441 (1446)
++|++|||||||++||..+.+.+.+.|++. +.|||+|||+.+.+.. ||+|++|+ +|++.++ +.+|-.|
T Consensus 457 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~--~g~y~~y 526 (635)
T PRK11147 457 KPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRY--VGGYHDA 526 (635)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEc--cCCHHHH
Confidence 999999999999999999999999999875 5699999999999865 89999998 8999876 3444444
No 90
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=2e-55 Score=555.09 Aligned_cols=522 Identities=15% Similarity=0.107 Sum_probs=376.4
Q ss_pred HHH-HHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 269 ICC-AYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 347 (1446)
Q Consensus 269 l~~-~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir 347 (1446)
+++ .+++.++..+++.++..++....|.+++.+++..... .....+. +++..++..++.....+...+.+.++.
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (555)
T TIGR01194 11 LLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFL-GQGSLFS----FGGLCLLALLFRIGADIFPAYAGMHII 85 (555)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cchHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566 7788888888899999999999999999887632111 1111111 112233444555666777888999999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhHhHHHHHHHHHHHHH
Q 000521 348 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALY-LLYTQVKFAFVSGLAITIL 426 (1446)
Q Consensus 348 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~-lL~~~lg~a~l~~~~v~~~ 426 (1446)
..+...+|+|.++++...+.+.++|++++.++.|++.+.+....+..+....+.+++++. +++....++.+ .++++++
T Consensus 86 ~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li-~l~~~~~ 164 (555)
T TIGR01194 86 ANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAI-TISAIII 164 (555)
T ss_pred HHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHHHH
Confidence 999999999999999998888899999999999999999876555555544444433333 33333222222 2222233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 427 LIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQ--IFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 504 (1446)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~--~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 504 (1446)
.+.+..+..++..+..++..+..++..+.+.|.+.|++++|.++.++ ...+++++.-++..+...+..........+.
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (555)
T TIGR01194 165 GTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFG 244 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455566677777788888899999999999999999999854 3333343332222222111111111111111
Q ss_pred HHHHHHHH--HHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhc
Q 000521 505 ATTPTLFS--LFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 582 (1446)
Q Consensus 505 ~~~~~~~~--~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~ 582 (1446)
.....+.. .+.++.+ .+.++.+.+++++.+...+..|+..+...++.+.++.+|.+||.++++.++.++......
T Consensus 245 ~~~~~~~~~~~~~~~~~---~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~ 321 (555)
T TIGR01194 245 QLLFFLLIGCALFAAAM---FASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELS 321 (555)
T ss_pred HHHHHHHHHHHHHHHHH---hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccc
Confidence 11111111 1111111 257999999999999999999999999999999999999999999986422111000000
Q ss_pred CCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCc
Q 000521 583 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 662 (1446)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G 662 (1446)
.... ............++++|++|+|+..+. ..+++|+|+||++++||+++|+||||||||||+++|+|+++|++|
T Consensus 322 ~~~~---~~~~~~~~~~~~i~~~~v~f~y~~~~~-~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G 397 (555)
T TIGR01194 322 DADN---VLLLAHDKSVDSIELKDVHMNPKAPEG-SEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEG 397 (555)
T ss_pred cccc---ccccccCCCCceEEEEEEEEEeCCCCC-CcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCc
Confidence 0000 000000112356999999999974311 113469999999999999999999999999999999999999999
Q ss_pred EEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000521 663 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 729 (1446)
Q Consensus 663 ~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~ 729 (1446)
+|.++| .++||+|+|++|++|+++|+ ..+.++++.+++++.++++++++.+|+|++|. .+
T Consensus 398 ~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~ 470 (555)
T TIGR01194 398 EILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TA 470 (555)
T ss_pred EEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc-----cc
Confidence 999986 48999999999999999996 33456778889999999999999999999984 78
Q ss_pred cchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEE
Q 000521 730 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKW 809 (1446)
Q Consensus 730 LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~ 809 (1446)
||||||||++||||++++|+|+|||||||+||+++++.+.+.++.....+++|+|+||||++.+..||+|++|++|++++
T Consensus 471 LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~ 550 (555)
T TIGR01194 471 LSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVK 550 (555)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999987643221235899999999999999999999999999986
Q ss_pred e
Q 000521 810 I 810 (1446)
Q Consensus 810 ~ 810 (1446)
.
T Consensus 551 ~ 551 (555)
T TIGR01194 551 D 551 (555)
T ss_pred e
Confidence 4
No 91
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-57 Score=511.63 Aligned_cols=519 Identities=22% Similarity=0.289 Sum_probs=385.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHH---HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 282 LLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLA---IALGLTS---ILKSFFDTQYSFHLSKLKLKLRSSIMTIIY 355 (1446)
Q Consensus 282 ~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~---~~l~~~~---~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy 355 (1446)
++.++.-++....|.+.+.+++.+.. +...-+.+. +.+.+.+ -+..++++...+...++..-....+-..+|
T Consensus 222 ~ll~i~rli~~~~pi~~k~iv~~lta--p~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lf 299 (790)
T KOG0056|consen 222 FLLIIGRLINVSLPILSKWIVDELTA--PDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELF 299 (790)
T ss_pred HHHHHHHHHhhhhHHhHHHHHHhhcC--cchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHH
Confidence 34444556677889999999988763 222222222 2222222 123566666666666666666777888999
Q ss_pred HHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHH---HHHHHHHH
Q 000521 356 QKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAIT---ILLIPVNK 432 (1446)
Q Consensus 356 ~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v~---~~~~~~~~ 432 (1446)
+|...++....-.+.+|++...|...++.+.-.-..+..+-...+.+++++...+. ..-...|++++ .+...+..
T Consensus 300 rHlh~LSlrwHL~rrtGeVLrvmdrGtssvtll~yvVF~i~PtllDl~va~vYF~~--~Fn~wFgLIVfl~m~lY~~~Ti 377 (790)
T KOG0056|consen 300 RHLHNLSLRWHLNRRTGEVLRVMDRGTSSVTLLEYVVFQIGPTLLDLGVAMVYFFI--KFNIWFGLIVFLMMLLYCYVTI 377 (790)
T ss_pred HHHHhhceeeeecccccceeehhccCcchhhHHHHHHhhcccHHHHhhhhhhhhhh--hHhHHHHHHHHHHHHHHhheee
Confidence 99999998887778899999999777666652222333444444455555544333 33333344333 22223333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 433 WIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMK----TRSSEVKHLSTRKYLDAWCVFFWATTP 508 (1446)
Q Consensus 433 ~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~----~R~~El~~~~~~~~~~~~~~~~~~~~~ 508 (1446)
.+...-.+++++++..-.+--..-.+.+-+-.+||.|+.|+...++..+ ..++|-+.+.....+......+...
T Consensus 378 ~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~l-- 455 (790)
T KOG0056|consen 378 KITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGL-- 455 (790)
T ss_pred eeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh--
Confidence 3444445666666665555556667888899999999999876655433 3444444433333322222211111
Q ss_pred HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcc
Q 000521 509 TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYI 588 (1446)
Q Consensus 509 ~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~ 588 (1446)
.+.....+.+|.+..+.+|+|...-...++-.+.+|++.+......++...+-++|+.+.++.++...+. +..++
T Consensus 456 gll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~---P~a~p-- 530 (790)
T KOG0056|consen 456 GLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDL---PGAPP-- 530 (790)
T ss_pred HHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcC---CCCCC--
Confidence 1122223456667788999999888899999999999999999999999999999999999654321111 11111
Q ss_pred cCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC
Q 000521 589 SNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG 668 (1446)
Q Consensus 589 ~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~ 668 (1446)
.....+.|+++|++|+|+++ +++|+||||+++||+.+++|||||+||||++++|.+.++..+|+|.+||
T Consensus 531 ------l~~~~G~i~fsnvtF~Y~p~-----k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDg 599 (790)
T KOG0056|consen 531 ------LKVTQGKIEFSNVTFAYDPG-----KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDG 599 (790)
T ss_pred ------ccccCCeEEEEEeEEecCCC-----CceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcC
Confidence 12356789999999999753 4559999999999999999999999999999999999999999999998
Q ss_pred -------------eEEEEcCCCCCCCccHHHHHhcCCCC-ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000521 669 -------------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1446)
Q Consensus 669 -------------~i~yv~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 734 (1446)
+||.||||..|||.||..||.++++- ..|...++.+|++.++.|..+|+|++|.|||+|..||||+
T Consensus 600 qdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGE 679 (790)
T KOG0056|consen 600 QDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGE 679 (790)
T ss_pred chHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcc
Confidence 59999999999999999999999874 4566777889999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChh
Q 000521 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSA 814 (1446)
Q Consensus 735 kqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~ 814 (1446)
|||||+||++.++|.|++|||+|||||.++++.|-.. +.. +..++|.|+|.||++.+-+||.|++++||+|+|.|+|+
T Consensus 680 KQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaa-L~r-lca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~He 757 (790)
T KOG0056|consen 680 KQRVAIARTILKAPSIILLDEATSALDTNTERAIQAA-LAR-LCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHE 757 (790)
T ss_pred hhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHH-HHH-HhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHH
Confidence 9999999999999999999999999999999998654 433 77899999999999999999999999999999999999
Q ss_pred HHHhc-cccCc
Q 000521 815 DLAVS-LYSGF 824 (1446)
Q Consensus 815 ~l~~~-~~~~~ 824 (1446)
|+... ++.+.
T Consensus 758 eLl~rdgG~Ya 768 (790)
T KOG0056|consen 758 ELLKRDGGAYA 768 (790)
T ss_pred HHHhccCCcHH
Confidence 99876 44443
No 92
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=4.2e-56 Score=566.40 Aligned_cols=202 Identities=21% Similarity=0.309 Sum_probs=163.0
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
..++++||+++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ +.++
T Consensus 507 ~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 507 PIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred ceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 469999999999533 3699999999999999999999999999999999999999999999875 3579
Q ss_pred EEEeCCCCCCCCcHHHhcC-C----CCCCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHhcc
Q 000521 1297 AVVPQSPFLFEGSLRDNLD-P----FHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLK 1370 (1446)
Q Consensus 1297 ~~VpQdp~lF~gTIR~NLd-p----~~~~~d~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALLr 1370 (1446)
+|+||++. ...++.+|.. . +...+++++.++|+..+ ++. ........||||||||++||||+++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~g---------l~~~~~~~~~~~LSgGqkqRvaLAraL~~ 644 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFG---------VTGNLALQPMYTLSGGQKSRVAFAKITFK 644 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCC---------CChHHhcCCccccCHHHHHHHHHHHHHhc
Confidence 99999973 2224444421 1 11233455555555554 432 2344556899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEE-Eeccchhhhhh
Q 000521 1371 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVC-ISFICRYFIFL 1442 (1446)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE-~~~~~~~~~~~ 1442 (1446)
+|++|||||||++||..+.+.+.+.+++. + .|||+|||+++.+.. ||+|++|++|++++ .|.+..|-.++
T Consensus 645 ~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~~~~ 716 (718)
T PLN03073 645 KPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYKKTL 716 (718)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHHHHh
Confidence 99999999999999999999998888764 4 499999999999976 89999999999984 57766665544
No 93
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.7e-55 Score=504.57 Aligned_cols=480 Identities=22% Similarity=0.251 Sum_probs=349.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHH-HHHHHHH
Q 000521 941 LCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFI-LNILLAN 1019 (1446)
Q Consensus 941 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~-l~~~~~~ 1019 (1446)
...+.++..++..++...+.+.+.+.-.+++..++...+++|..--...+....++ |++.+..++... ...++..
T Consensus 69 al~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~Lr----DL~qvR~Fltg~g~~A~fDa 144 (580)
T COG4618 69 ALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPLR----DLDQVRQFLTGTGLTAFFDA 144 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhcCCCccccchh----hHHHHHHHHcCCCcchhcCC
Confidence 34455567778889999999999999999999999999888876544444444443 444444433210 0000000
Q ss_pred HHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHH
Q 000521 1020 FVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAK 1099 (1446)
Q Consensus 1020 ~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~ 1099 (1446)
=... ..+.+++...||+.++.+.-.++...+...-....++--+...+....-..+..-+..+..+|+|.|......++
T Consensus 145 PW~P-~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~r 223 (580)
T COG4618 145 PWMP-LYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKR 223 (580)
T ss_pred chHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHH
Confidence 0000 111223334555554443332222222211112222222222223333446677889999999999998877766
Q ss_pred HHHHHHHHHHH----HHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHH
Q 000521 1100 FKEHVVLYQRT----SYSEL---TASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLL 1172 (1446)
Q Consensus 1100 ~~~~~d~~~~~----~~~~~---~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l 1172 (1446)
+.+....+... ..... ...+-+-..+|. . +..+-+.+. ..+..++|.+...-........++
T Consensus 224 W~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs---~---iLg~GA~Lv-----i~ge~t~G~mIA~SIl~gRaLaPi 292 (580)
T COG4618 224 WGRFNAAYLSAQERASDRNGAFGALSRALRMALQS---A---VLGLGAWLV-----IKGEITPGMMIAGSILSGRALAPI 292 (580)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH---H---HHhcceeeE-----EcCcCCcchhhHHHHHhhhhhccH
Confidence 65544444333 22211 111211111111 0 111111111 134556776655555555666788
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEE
Q 000521 1173 GNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIV 1252 (1446)
Q Consensus 1173 ~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIv 1252 (1446)
...+..|.++-.+..|..|+.++++..++.... ...| - .+|.+.++++++.=++...++|+|+||+++|||-+||+
T Consensus 293 d~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~-m~LP--~-P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgII 368 (580)
T COG4618 293 DLAIANWKQFVAARQSYKRLNELLAELPAAAER-MPLP--A-PQGALSVERLTAAPPGQKKPILKGISFALQAGEALGII 368 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccccCC-CCCC--C-CCceeeEeeeeecCCCCCCcceecceeEecCCceEEEE
Confidence 899999999999999999999999766543221 1111 1 26999999999966556679999999999999999999
Q ss_pred CCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCC-CCChHHHHHHHHH
Q 000521 1253 GRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEK 1331 (1446)
Q Consensus 1253 GrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~-~~~d~ei~~aL~~ 1331 (1446)
||||||||||.++|.|..+|.+|+|.+||-|+++.+.+++-++|||.|||-.||+|||.|||.-|+ +.+++.|.+|.+.
T Consensus 369 GPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~l 448 (580)
T COG4618 369 GPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARL 448 (580)
T ss_pred CCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999997766 6677889999999
Q ss_pred ccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHh-cCCcEEEEe
Q 000521 1332 CHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSE-CKGMTVITI 1408 (1446)
Q Consensus 1332 ~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~-~~~~TvI~I 1408 (1446)
++.+|.|-.+ ||||.|||+|..|||||||||+||||++.+|++++||||-||||.+-|+.+.++|.+. .+++|+|+|
T Consensus 449 AgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvvi 528 (580)
T COG4618 449 AGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVI 528 (580)
T ss_pred cChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEE
Confidence 9999999999 9999999999999999999999999999999999999999999999999999988765 469999999
Q ss_pred ccCchhHhhcCEEEEEeCCEEEEEeccchhhh
Q 000521 1409 AHRISTVLNMDEILILDHGHLVCISFICRYFI 1440 (1446)
Q Consensus 1409 aHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~~ 1440 (1446)
|||.+.+..+|+|+||++|++..||.......
T Consensus 529 aHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa 560 (580)
T COG4618 529 AHRPSALASVDKILVLQDGRIAAFGPREEVLA 560 (580)
T ss_pred ecCHHHHhhcceeeeecCChHHhcCCHHHHHH
Confidence 99999999999999999999999998766543
No 94
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=8.9e-55 Score=556.02 Aligned_cols=513 Identities=15% Similarity=0.128 Sum_probs=387.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcc----hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 896 ITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYS----TSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVH 971 (1446)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~----~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh 971 (1446)
.+++.+++.++...+....+++.+...+.....+ ... ...++++++++.++..+..++...+......+..+++|
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~-~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~ 175 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRS-PRNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLY 175 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444445555566666666777776665422111 111 11223334444455555555555666677778888888
Q ss_pred HHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHh-HhHHHHHHHHHHHHHHHH
Q 000521 972 NTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSY-VQVFFLLLLVPFWFIYSK 1050 (1446)
Q Consensus 972 ~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~pl~~~~~~ 1050 (1446)
++.+++....++.|||+ ++|++.+|+++|++.+.+.+...+..++..++.+++.++.+.. ..|.+.++++...++..+
T Consensus 176 ~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~ 254 (659)
T TIGR00954 176 SKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGV 254 (659)
T ss_pred HHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 88888888889999997 8899999999999999999988888888888888776665554 555554544444444455
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 000521 1051 LQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAA 1130 (1446)
Q Consensus 1051 i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~ 1130 (1446)
+.+++.+..+++.+......+.+.+.+.|.++|.++||+|+.|+.+.+++.+..++..+..+.......++....+++..
T Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 334 (659)
T TIGR00954 255 VLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAK 334 (659)
T ss_pred HHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 55566666666666666777788899999999999999999999999999999999888888888777777777666543
Q ss_pred HH---HHHHHH-HHHHhhcCCCCcCcccHHH-HHHHHHH---HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccc
Q 000521 1131 FI---ISFIAT-MAVIGSRGNLPATFSTPGL-VGLALSY---AAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1202 (1446)
Q Consensus 1131 ~~---~~~~~~-~~v~~~~~~~~~~~~~~g~-vgl~l~~---~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~ 1202 (1446)
.. +..+.. ..++...+ ...+..+.|. ++..++| +..+..++..+...+.++....++.+|+.++.+.++|.
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~-~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~ 413 (659)
T TIGR00954 335 YTWSAVGLVAVSIPIFDKTH-PAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDV 413 (659)
T ss_pred HHHHHHHHHHHHHHHHhccc-ccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21 111111 11111110 0012344443 3323333 56668889999999999999999999999999764432
Q ss_pred ccc-------CC-CC--------------CCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHH
Q 000521 1203 LCG-------YQ-SL--------------SPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKS 1260 (1446)
Q Consensus 1203 ~~~-------~~-~~--------------~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKS 1260 (1446)
... .. .. .......+.|+++||+++|+++ +++|+|+||+|++||++||+|+||||||
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsGKS 492 (659)
T TIGR00954 414 KSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCGKS 492 (659)
T ss_pred hcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCCHH
Confidence 100 00 00 0001134679999999999643 4699999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCC--------CCCChHHHHHHHHHc
Q 000521 1261 SILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF--------HMNDDLKIWSVLEKC 1332 (1446)
Q Consensus 1261 TLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~--------~~~~d~ei~~aL~~~ 1332 (1446)
||+++|.|+++|++|+|.+|+ |+++++|||+|.+|++|+|||+... ...++++++++++.+
T Consensus 493 TLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~ 561 (659)
T TIGR00954 493 SLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNV 561 (659)
T ss_pred HHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHc
Confidence 999999999999999999874 6789999999999999999999753 234678899999999
Q ss_pred cHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccC
Q 000521 1333 HVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHR 1411 (1446)
Q Consensus 1333 ~L~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHr 1411 (1446)
++.++++.- |+||..+ .+.+||||||||++||||++++|+++|||||||+||+++++.+++.+++. ++|+|+||||
T Consensus 562 ~l~~~~~~~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~--~~tvI~isH~ 638 (659)
T TIGR00954 562 QLTHILEREGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF--GITLFSVSHR 638 (659)
T ss_pred CCHHHHhhcCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEeCc
Confidence 999988766 9999876 46699999999999999999999999999999999999999999999874 8999999999
Q ss_pred chhHhhcCEEEEEeC
Q 000521 1412 ISTVLNMDEILILDH 1426 (1446)
Q Consensus 1412 l~ti~~~DrIlvl~~ 1426 (1446)
++++..||+|++|+.
T Consensus 639 ~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 639 KSLWKYHEYLLYMDG 653 (659)
T ss_pred hHHHHhCCEEEEEeC
Confidence 999999999999973
No 95
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1e-53 Score=586.05 Aligned_cols=483 Identities=18% Similarity=0.214 Sum_probs=360.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHh
Q 000521 335 YSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQV 413 (1446)
Q Consensus 335 ~~~~~~r~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~l 413 (1446)
..+...+.+.+....+...++++.++.+...+...+.|+++|.++.|++.+..... .+..+....+.+++.+.++....
T Consensus 945 ~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~ 1024 (1490)
T TIGR01271 945 RGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQ 1024 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455677778888888999999999999999989999999999999999987554 44555555555555554444433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHH
Q 000521 414 KFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTR 493 (1446)
Q Consensus 414 g~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~ 493 (1446)
++..++.++++++.+.+..+..+..+..++.....++...+.+.|.++|+.+||.||+|+.+.++..+.-+...+.....
T Consensus 1025 p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~ 1104 (1490)
T TIGR01271 1025 PYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLY 1104 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333444445555555666667777888899999999999999999999999888877644322221111
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 000521 494 KYLDAWCVFFWAT-TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCS 572 (1446)
Q Consensus 494 ~~~~~~~~~~~~~-~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~ 572 (1446)
.....+....... ...++..+.+ ..+.....+++.+-.++++...+..++..+...+..+..+.+|.+||.+|++.+
T Consensus 1105 ~~~~~wl~~~~~~i~~~~~~~~~~--l~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~ 1182 (1490)
T TIGR01271 1105 LSTLRWFQMRIDIIFVFFFIAVTF--IAIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLP 1182 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1111121111111 1111111111 111112345666666677777888899999999999999999999999999765
Q ss_pred CCchhhhhhcCCC--C---cccCCCcc-CCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcH
Q 000521 573 EYKHELEQAANSP--S---YISNGLSN-FNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGK 646 (1446)
Q Consensus 573 e~~~~~~~~~~~~--~---~~~~~~~~-~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGK 646 (1446)
+..+......... . ........ .-+..+.|+++|++|+|+++. +++|+|+||+|++||.++|||++||||
T Consensus 1183 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~----~~vL~~is~~I~~GekvaIvGrSGsGK 1258 (1490)
T TIGR01271 1183 QEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAG----RAVLQDLSFSVEGGQRVGLLGRTGSGK 1258 (1490)
T ss_pred CccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCC----cceeeccEEEEcCCCEEEEECCCCCCH
Confidence 4322100000000 0 00000000 002346799999999997531 346999999999999999999999999
Q ss_pred HHHHHHHhcCccCCCcEEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHh
Q 000521 647 SSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDIS 713 (1446)
Q Consensus 647 Stll~~llg~~~~~~G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~ 713 (1446)
|||+++|+|+++ .+|+|.++| +|+|+||+|.||+|||||||....++++++..++++.|+|.+.+.
T Consensus 1259 STLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~ 1337 (1490)
T TIGR01271 1259 STLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIE 1337 (1490)
T ss_pred HHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHH
Confidence 999999999997 799999987 599999999999999999998766788999999999999999999
Q ss_pred hccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchh
Q 000521 714 LMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI 793 (1446)
Q Consensus 714 ~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l 793 (1446)
.+|+|.+|.||++|.+||||||||++||||++++|+|+|||||||+||+++++.|.+. +.. ..+++|+|+||||++.+
T Consensus 1338 ~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~-L~~-~~~~~TvI~IaHRl~ti 1415 (1490)
T TIGR01271 1338 QFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKT-LKQ-SFSNCTVILSEHRVEAL 1415 (1490)
T ss_pred hCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999876 443 45789999999999999
Q ss_pred hhCCEEEEEeCCEEEEecChhHHHhccccCccc
Q 000521 794 SAADMVVVMDKGQVKWIGSSADLAVSLYSGFWS 826 (1446)
Q Consensus 794 ~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 826 (1446)
..+|+|++|++|+|++.|+|+++.+.++.+.++
T Consensus 1416 ~~~DrIlvL~~G~ivE~g~p~~Ll~~~~~f~~l 1448 (1490)
T TIGR01271 1416 LECQQFLVIEGSSVKQYDSIQKLLNETSLFKQA 1448 (1490)
T ss_pred HhCCEEEEEECCEEEEeCCHHHHHcCCcHHHHH
Confidence 999999999999999999999998755544444
No 96
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=6.4e-55 Score=531.36 Aligned_cols=480 Identities=23% Similarity=0.300 Sum_probs=332.7
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--eEEEEcCCCC
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPW 678 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~--~i~yv~Q~p~ 678 (1446)
.+.++|++.+|.. +++++|+||++.+|+.+++||+|||||||||++|.|+..|++|+|...+ ++||++|+|.
T Consensus 3 ~i~~~~ls~~~g~------~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~ 76 (530)
T COG0488 3 MITLENLSLAYGD------RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPP 76 (530)
T ss_pred eEEEeeeEEeeCC------ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCC
Confidence 4678899999842 3459999999999999999999999999999999999999999999986 7999999999
Q ss_pred CCCc-cHHHHHhcCCCCC---hhhHHHHH---------------------HHhcchHHHhhccCC--CcccccCCCCccc
Q 000521 679 ILSG-TIRDNILFGKNYD---PQSYSETL---------------------KACTLDVDISLMVGG--DMAYIGEKGVNLS 731 (1446)
Q Consensus 679 l~~~-ti~~nI~~g~~~~---~~~~~~v~---------------------~~~~l~~di~~~~~g--d~t~ig~~g~~LS 731 (1446)
.... ||+|.+.-+...- ..+|+++. +...++.+++..-.| .... .....+||
T Consensus 77 ~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~LS 155 (530)
T COG0488 77 LDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSSLS 155 (530)
T ss_pred cCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhhcC
Confidence 9865 9999998764210 01111111 111122222222222 1111 44557899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEE-E
Q 000521 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK-W 809 (1446)
Q Consensus 732 GGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~-~ 809 (1446)
||||.||+|||||..+||+|||||||++||..+.+++-+.+ . ..+| |+|+||||.++|.. |++|+.+++|++. +
T Consensus 156 GG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L-~--~~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y 231 (530)
T COG0488 156 GGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYL-K--RYPG-TVIVVSHDRYFLDNVATHILELDRGKLTPY 231 (530)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHH-H--hCCC-cEEEEeCCHHHHHHHhhheEEecCCceeEe
Confidence 99999999999999999999999999999999999998763 2 2345 99999999999998 9999999999864 6
Q ss_pred ecChhHHHhccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcCcchhHhHHHHH
Q 000521 810 IGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYA 889 (1446)
Q Consensus 810 ~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~ 889 (1446)
.|+|+...+..... .... .. ..+..+++.++
T Consensus 232 ~Gny~~~~~~r~~~-------------~~~~--------~~---------------~~~~~~~~~~~------------- 262 (530)
T COG0488 232 KGNYSSYLEQKAER-------------LRQE--------AA---------------AYEKQQKELAK------------- 262 (530)
T ss_pred cCCHHHHHHHHHHH-------------HHHH--------HH---------------HHHHHHHHHHH-------------
Confidence 67777664321000 0000 00 00000000000
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 890 KFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVK 969 (1446)
Q Consensus 890 ~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 969 (1446)
+..|+..
T Consensus 263 ----------------------------~~~~i~r--------------------------------------------- 269 (530)
T COG0488 263 ----------------------------EQEWIRR--------------------------------------------- 269 (530)
T ss_pred ----------------------------HHHHHHH---------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHH
Q 000521 970 VHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYS 1049 (1446)
Q Consensus 970 lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~ 1049 (1446)
+.
T Consensus 270 ----------------------------~~-------------------------------------------------- 271 (530)
T COG0488 270 ----------------------------GK-------------------------------------------------- 271 (530)
T ss_pred ----------------------------HH--------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 000521 1050 KLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLA 1129 (1446)
Q Consensus 1050 ~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~ 1129 (1446)
...+++++
T Consensus 272 ----~~~~~~k~-------------------------------------------------------------------- 279 (530)
T COG0488 272 ----AAASKAKK-------------------------------------------------------------------- 279 (530)
T ss_pred ----hccchHHH--------------------------------------------------------------------
Confidence 00000000
Q ss_pred HHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH--hcCCccccc-c-
Q 000521 1130 AFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY--MDVPQEELC-G- 1205 (1446)
Q Consensus 1130 ~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~--~~~~~e~~~-~- 1205 (1446)
.+......+|+.+- ...|.+... .
T Consensus 280 ----------------------------------------------------a~sr~k~l~k~~~~~~~~~~~~~~~~~~ 307 (530)
T COG0488 280 ----------------------------------------------------AKSRIKRLEKLEARLAEERPVEEGKPLA 307 (530)
T ss_pred ----------------------------------------------------HHHHHHHHHHHHhhhhhcccccccccce
Confidence 00000111111110 000111000 0
Q ss_pred -CCCCCCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeC
Q 000521 1206 -YQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNI 1284 (1446)
Q Consensus 1206 -~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di 1284 (1446)
...+++.-+.+-.++++|+++.|.++ .++++++||.|.+|++|||+||+|+|||||+++|.|-..|.+|+|.+.-
T Consensus 308 ~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~--- 383 (530)
T COG0488 308 FRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGE--- 383 (530)
T ss_pred eeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCC---
Confidence 00111111224469999999999755 6799999999999999999999999999999999999999999998742
Q ss_pred CCCChHhHhcceEEEeCCCC-CCC-CcHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000521 1285 INTPVRDLRGRFAVVPQSPF-LFE-GSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1446)
Q Consensus 1285 ~~i~~~~lR~~i~~VpQdp~-lF~-gTIR~NLdp~~-~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1446)
.-++||.+|+-. +++ .|+-+++.... ...+.++...|.+.++...- +......||||||-|
T Consensus 384 --------~v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~--------~~~~v~~LSGGEk~R 447 (530)
T COG0488 384 --------TVKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGED--------QEKPVGVLSGGEKAR 447 (530)
T ss_pred --------ceEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChHH--------HhCchhhcCHhHHHH
Confidence 236999999983 443 38888886544 22366777777776654221 122334699999999
Q ss_pred HHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEE-eccchh
Q 000521 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCI-SFICRY 1438 (1446)
Q Consensus 1362 l~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~-~~~~~~ 1438 (1446)
+.||+.++.+|++|||||||.+||.+|-+.+.++|.+ |+| |||+|||+.+.+.. |++|+++++ ++.++ |.+..|
T Consensus 448 l~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~-f~G-tvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y 523 (530)
T COG0488 448 LLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLD-FEG-TVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDY 523 (530)
T ss_pred HHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHh-CCC-eEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHH
Confidence 9999999999999999999999999999999999976 444 99999999999986 899999999 77766 555444
No 97
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.4e-55 Score=552.82 Aligned_cols=192 Identities=20% Similarity=0.276 Sum_probs=159.8
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++|++++|++ ..|+++||+|++||.+||+|+||||||||+++|.|+.+|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 5899999999964 25999999999999999999999999999999999999999999986 1599
Q ss_pred EEeCCCCC-CCCcHHHhcCCCC-CCC-hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1298 VVPQSPFL-FEGSLRDNLDPFH-MND-DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1298 ~VpQdp~l-F~gTIR~NLdp~~-~~~-d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
|+||++.+ ++.|+++|+.... ... +....++ ++.+|++.........||||||||++|||||+++|+|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~---------L~~l~l~~~~~~~~~~LSGGe~QRvaiAraL~~~p~l 474 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEI---------IKPLQLERLLDKNVKDLSGGELQRVAIAACLSRDADL 474 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHHHHH---------HHHCCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999875 4569999986431 111 1222333 3444555445556668999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEecc
Q 000521 1375 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFI 1435 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~ 1435 (1446)
|||||||++||.++...+.+.|++.. .++|+|+|+|+++.+.. ||||++|++ ++...|..
T Consensus 475 lLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~~ 537 (590)
T PRK13409 475 YLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGHA 537 (590)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeeec
Confidence 99999999999999999999998764 37899999999998875 899999964 77766553
No 98
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=7.2e-53 Score=531.99 Aligned_cols=508 Identities=17% Similarity=0.157 Sum_probs=362.9
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 265 LVRAICCAYGYPYICLGLLKVVNDSIGFAG-PLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 343 (1446)
Q Consensus 265 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~-P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~ 343 (1446)
+++.+++.+++.++...++.++..++.+.. |++.+.+++.+.. .......+++.+++. .++.....+...+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 76 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADT--SLLVLPEFLGLLLLL----MAVTLGSQLALTTLG 76 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--cchHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 566777888888888888889888888874 7787888886532 111111111111111 223345566677788
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHH
Q 000521 344 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 423 (1446)
Q Consensus 344 ~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v 423 (1446)
.++...+...+|+|.++++...+.+.++|+++|.++.|++.+......+..++...+.+++++++++..-...+++.+++
T Consensus 77 ~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~ 156 (547)
T PRK10522 77 HHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTAIW 156 (547)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 88888999999999999999988888999999999999999987655566677777776665555444333333344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 424 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYG--WEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 501 (1446)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g--~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 501 (1446)
+++.+.+..++.++..+..++.++..+++.+.+.|.++|++++++.+ .++.+.+++.+..++-.+...+.........
T Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (547)
T PRK10522 157 MAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSAV 236 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 44445566777888888888999999999999999999999997433 2234444444432222222112221111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC---CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhh
Q 000521 502 FFWATTPTLFSLFTFGLFALMGH---QLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHEL 578 (1446)
Q Consensus 502 ~~~~~~~~~~~~~~f~~~~~~~~---~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~ 578 (1446)
.... +...+.++.+.+.++ ..+.+.+.+...+...+..|+..+...++.+.++..+.+|+.+++..++..+.
T Consensus 237 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~- 311 (547)
T PRK10522 237 NWSN----IMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEF- 311 (547)
T ss_pred HHHH----HHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc-
Confidence 1111 111111222222211 12222222222233346789999999999999999999999999864432110
Q ss_pred hhhcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCcc
Q 000521 579 EQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM 658 (1446)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~ 658 (1446)
.. ..+ .+....++++|++|+|+.+ +++|+|+||++++|+.++|+||||||||||+++|+|+++
T Consensus 312 ~~--~~~----------~~~~~~i~~~~v~f~y~~~-----~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~ 374 (547)
T PRK10522 312 PR--PQA----------FPDWQTLELRNVTFAYQDN-----GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQ 374 (547)
T ss_pred cc--ccc----------cCcCceEEEEEEEEEeCCC-----CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 00 000 0112469999999999632 235999999999999999999999999999999999999
Q ss_pred CCCcEEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccC
Q 000521 659 LTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGE 725 (1446)
Q Consensus 659 ~~~G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~ 725 (1446)
|++|+|.++| +++||+|+|++|++|++|| +...+++..+++++.+++..++.. ++|. .
T Consensus 375 ~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~ 445 (547)
T PRK10522 375 PQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----I 445 (547)
T ss_pred CCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----C
Confidence 9999999876 5999999999999999999 455677788888888888776652 3331 2
Q ss_pred CCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhhCCEEEEEeC
Q 000521 726 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDK 804 (1446)
Q Consensus 726 ~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~ 804 (1446)
+|.+||||||||++||||++++|+++|||||||+||+++++.+.+.+ ..... +++|+|+||||++.+..||+|++|++
T Consensus 446 ~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l-~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 524 (547)
T PRK10522 446 SNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVL-LPLLQEMGKTIFAISHDDHYFIHADRLLEMRN 524 (547)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHH-HHHHHhCCCEEEEEEechHHHHhCCEEEEEEC
Confidence 48899999999999999999999999999999999999999988763 22122 47899999999999999999999999
Q ss_pred CEEEEe
Q 000521 805 GQVKWI 810 (1446)
Q Consensus 805 G~i~~~ 810 (1446)
|++++.
T Consensus 525 G~i~e~ 530 (547)
T PRK10522 525 GQLSEL 530 (547)
T ss_pred CEEEEe
Confidence 999865
No 99
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4e-53 Score=500.50 Aligned_cols=436 Identities=25% Similarity=0.351 Sum_probs=331.2
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------- 668 (1446)
..++++|++-+|+. ..+|+|+||++.+||+++++|.||+|||||+|.|.|.++|++|+|.++|
T Consensus 7 ~ll~~~~i~K~Fgg------V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A 80 (500)
T COG1129 7 PLLELRGISKSFGG------VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDA 80 (500)
T ss_pred ceeeeecceEEcCC------ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHH
Confidence 45789999988863 2459999999999999999999999999999999999999999999987
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCCC-------Chhh----HHHHHHHhcchHHHhhccCCCcccccCCCCccchH
Q 000521 669 ---SIAYVPQVPWILS-GTIRDNILFGKNY-------DPQS----YSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 733 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~~-~ti~~nI~~g~~~-------~~~~----~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGG 733 (1446)
.|+.|.|++.|++ -||.|||.+|++. |... .+++++..++..| ......+||+|
T Consensus 81 ~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~-----------~~~~v~~Lsia 149 (500)
T COG1129 81 LAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDID-----------PDTLVGDLSIA 149 (500)
T ss_pred HhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCC-----------hhhhhhhCCHH
Confidence 4999999999875 5999999888753 2222 2233333333211 23345589999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecC
Q 000521 734 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 812 (1446)
Q Consensus 734 QkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 812 (1446)
|||-|+||||++.+++|+|||||||+|+.+..+++|+. +.....+|.++|+|||+++++.. ||+|.||+||+.+..++
T Consensus 150 qrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~-ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~ 228 (500)
T COG1129 150 QRQMVEIARALSFDARVLILDEPTAALTVKETERLFDL-IRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRP 228 (500)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecc
Confidence 99999999999999999999999999999999999986 44435578899999999999766 99999999999875432
Q ss_pred h-hHHHhccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcCcchhHhHHHHHhh
Q 000521 813 S-ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKF 891 (1446)
Q Consensus 813 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~ 891 (1446)
. .++ +.++.. .
T Consensus 229 ~~~~~------------------------------------------------~~~~lv----------~---------- 240 (500)
T COG1129 229 TAAET------------------------------------------------SEDELV----------R---------- 240 (500)
T ss_pred cccCC------------------------------------------------CHHHHH----------H----------
Confidence 1 100 000000 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 892 SGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVH 971 (1446)
Q Consensus 892 ~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh 971 (1446)
++
T Consensus 241 -----------------------------~M------------------------------------------------- 242 (500)
T COG1129 241 -----------------------------LM------------------------------------------------- 242 (500)
T ss_pred -----------------------------Hh-------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHH
Q 000521 972 NTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKL 1051 (1446)
Q Consensus 972 ~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i 1051 (1446)
.|
T Consensus 243 -------------------vG----------------------------------------------------------- 244 (500)
T COG1129 243 -------------------VG----------------------------------------------------------- 244 (500)
T ss_pred -------------------hC-----------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 000521 1052 QFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAF 1131 (1446)
Q Consensus 1052 ~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~ 1131 (1446)
|++
T Consensus 245 --------r~~--------------------------------------------------------------------- 247 (500)
T COG1129 245 --------REL--------------------------------------------------------------------- 247 (500)
T ss_pred --------cch---------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCC
Q 000521 1132 IISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSP 1211 (1446)
Q Consensus 1132 ~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~ 1211 (1446)
.+..++. +.
T Consensus 248 ----------------------------------------------------------------~~~~~~~-------~~ 256 (500)
T COG1129 248 ----------------------------------------------------------------EDLFPEP-------PE 256 (500)
T ss_pred ----------------------------------------------------------------hhhcccc-------cc
Confidence 0000000 00
Q ss_pred CCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCC-hH
Q 000521 1212 DWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VR 1290 (1446)
Q Consensus 1212 ~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~ 1290 (1446)
.-+..-.++++|++.. ..++|+||++++||.+||.|=-|||+|-++.+|+|.-++.+|+|.+||.++.--+ .+
T Consensus 257 ~~~~~~~l~v~~l~~~------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~ 330 (500)
T COG1129 257 EGIGEPVLEVRNLSGG------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRD 330 (500)
T ss_pred cCCCCcEEEEecCCCC------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHH
Confidence 0001124667777542 2588999999999999999999999999999999999999999999999886655 55
Q ss_pred hHhcceEEEeCCCC---CC-CCcHHHhcCCCC--CCChH-HHHHHHHHccHHHHHHhCCCchhh-hcCCCCCChhHHHHH
Q 000521 1291 DLRGRFAVVPQSPF---LF-EGSLRDNLDPFH--MNDDL-KIWSVLEKCHVKEEVEAVGLETFV-KESGISFSVGQRQLI 1362 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~---lF-~gTIR~NLdp~~--~~~d~-ei~~aL~~~~L~~~i~~lgLdt~v-~e~G~~LSgGQrQrl 1362 (1446)
..+..|+|||-|-- +| .-||++|+.... .++.. -+...-++.-..++++.++..+.= ...-.+||||.+|++
T Consensus 331 Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v~~LSGGNQQKV 410 (500)
T COG1129 331 AIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPIGTLSGGNQQKV 410 (500)
T ss_pred HHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchhhcCCchhhhhH
Confidence 78889999999874 44 559999996431 11100 233334444455667766333221 122237999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHh-hcCEEEEEeCCEEEE
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVC 1431 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE 1431 (1446)
+|||.|..+|+||||||||.++|..+.+.|.+.|++.. +|.+||+|+-.+..+. .||||+||.+|+++.
T Consensus 411 vlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~ 481 (500)
T COG1129 411 VLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVG 481 (500)
T ss_pred HHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999875 5899999999999987 699999999999986
No 100
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=3.4e-50 Score=513.87 Aligned_cols=516 Identities=16% Similarity=0.171 Sum_probs=376.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 276 PYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIY 355 (1446)
Q Consensus 276 ~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy 355 (1446)
.++..+++.++.+++....|++.+.+++.+.+.+... -...++.++++.++.+++.....|...++..++|..+...++
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~-f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~ 175 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRN-FAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLY 175 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677888888999999999999999876432211 111111222233334444444555556666666666666666
Q ss_pred HHHhcC----CccccCCCChhHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHhHHHH-HHHHHHHHHHHH
Q 000521 356 QKCLYV----RLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAF-VSGLAITILLIP 429 (1446)
Q Consensus 356 ~K~L~l----~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~~lL~~~lg~a~-l~~~~v~~~~~~ 429 (1446)
++.++. +...+++ ..|++.+.+++|++.+.+... .+..+...++.++.+++.++..+++.. ++.++.+++...
T Consensus 176 ~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~ 254 (659)
T TIGR00954 176 SKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGV 254 (659)
T ss_pred HHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 666553 3333333 579999999999999988654 456666777777777777776666643 333344455556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000521 430 VNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP- 508 (1446)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~- 508 (1446)
+..++.+++.+..++..+..++-.+..+|.++|+++||+|+.|+.+.+++++.-++-.+...+.....+....+.....
T Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 334 (659)
T TIGR00954 255 VLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAK 334 (659)
T ss_pred HHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 6777888888999999999999999999999999999999999998888877665555665555555554443332222
Q ss_pred ---HHHHHHHHHHHHHh-C----CCCCHhHHHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCch
Q 000521 509 ---TLFSLFTFGLFALM-G----HQLDAAMVFT-C---LALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH 576 (1446)
Q Consensus 509 ---~~~~~~~f~~~~~~-~----~~Lt~~~~ft-~---l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~ 576 (1446)
..+..+..+...+. . +.+|.+..+. . ..++..+..|+..+...+..+.++.++.+||.++++.++..+
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~ 414 (659)
T TIGR00954 335 YTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVK 414 (659)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12222223332222 2 5788886544 2 334677789999999999999999999999999996432110
Q ss_pred hhh-hhcCCCC-----------cccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCC
Q 000521 577 ELE-QAANSPS-----------YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGS 644 (1446)
Q Consensus 577 ~~~-~~~~~~~-----------~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~Gs 644 (1446)
... .....+. ....+..........++++|++|.|+.+ +++|+|+||++++||.++|+|||||
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-----~~il~~isl~i~~Ge~~~IvG~nGs 489 (659)
T TIGR00954 415 SGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-----DVLIESLSFEVPSGNHLLICGPNGC 489 (659)
T ss_pred cccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-----CeeeecceEEECCCCEEEEECCCCC
Confidence 000 0000000 0000000011123469999999988532 2359999999999999999999999
Q ss_pred cHHHHHHHHhcCccCCCcEEEEeC--eEEEEcCCCCCCCccHHHHHhcCC--------CCChhhHHHHHHHhcchHHHhh
Q 000521 645 GKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPWILSGTIRDNILFGK--------NYDPQSYSETLKACTLDVDISL 714 (1446)
Q Consensus 645 GKStll~~llg~~~~~~G~i~~~~--~i~yv~Q~p~l~~~ti~~nI~~g~--------~~~~~~~~~v~~~~~l~~di~~ 714 (1446)
|||||+++|+|+++|++|+|.+++ +++||||+|+++++|++|||.++. ..++++..++++.+++++.++.
T Consensus 490 GKSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~ 569 (659)
T TIGR00954 490 GKSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER 569 (659)
T ss_pred CHHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh
Confidence 999999999999999999998864 699999999999999999999874 2345677889999999887776
Q ss_pred ccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh
Q 000521 715 MVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS 794 (1446)
Q Consensus 715 ~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~ 794 (1446)
|.|++|..+ .+.+||||||||++||||++++|++++||||||+||+++++.+.+.+ .. .++|+|++||+++.++
T Consensus 570 -~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l-~~---~~~tvI~isH~~~~~~ 643 (659)
T TIGR00954 570 -EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLC-RE---FGITLFSVSHRKSLWK 643 (659)
T ss_pred -cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHH-HH---cCCEEEEEeCchHHHH
Confidence 899999876 56799999999999999999999999999999999999999988763 22 3789999999999999
Q ss_pred hCCEEEEEeC
Q 000521 795 AADMVVVMDK 804 (1446)
Q Consensus 795 ~ad~i~~l~~ 804 (1446)
.||++++|+.
T Consensus 644 ~~d~il~l~~ 653 (659)
T TIGR00954 644 YHEYLLYMDG 653 (659)
T ss_pred hCCEEEEEeC
Confidence 9999999973
No 101
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.5e-51 Score=457.12 Aligned_cols=467 Identities=19% Similarity=0.254 Sum_probs=356.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhHhHHHHHHH
Q 000521 342 LKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYLLYTQVKFAFVSG 420 (1446)
Q Consensus 342 ~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~pl~i~i~~~lL~~~lg~a~l~~ 420 (1446)
.+......+.-..|.++++|+.....+..+|.+..-+.--.+-|....++ +..+....+++++++.++++..||.....
T Consensus 9 v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~ 88 (497)
T COG5265 9 VGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALT 88 (497)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHH
Confidence 33344445666788999999888777777777665555555555554443 34555667899999999999999876655
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 421 LAITILLIPVNKWI-ANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAW 499 (1446)
Q Consensus 421 ~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~ 499 (1446)
.++.+++..+-.+. ...-....++.+++-.+......+.|-+-.++|.||-|+.+..+..+..+.--+...|...-..+
T Consensus 89 t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~ 168 (497)
T COG5265 89 TLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLV 168 (497)
T ss_pred HHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHH
Confidence 55555444332222 23323344444455455566777999999999999999988877766543322222221111111
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchh
Q 000521 500 CVFFWAT--TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 577 (1446)
Q Consensus 500 ~~~~~~~--~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~ 577 (1446)
.++.... ...+....+.+...+..+.+|.+...-.-++...+..|++.+......+-+++...+++.+.+..+-....
T Consensus 169 Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~d 248 (497)
T COG5265 169 LNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVSD 248 (497)
T ss_pred HHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhcc
Confidence 1111100 11112223334444567899999999999999999999999999999999999999999888865421111
Q ss_pred hhhhcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCc
Q 000521 578 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 657 (1446)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~ 657 (1446)
.. ..+.. .....+.+.|++++|.|.++ +++|+++||++++|+.+++||++|+||||++++|.+++
T Consensus 249 ~p---da~~L-------~~~~~g~v~F~~V~F~y~~~-----r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFy 313 (497)
T COG5265 249 AP---DAPPL-------WPVRLGAVAFINVSFAYDPR-----RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFY 313 (497)
T ss_pred CC---CCccc-------cccccceEEEEEEEeecccc-----chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHh
Confidence 10 01110 00234679999999999643 45699999999999999999999999999999999999
Q ss_pred cCCCcEEEEeC-------------eEEEEcCCCCCCCccHHHHHhcCCCC-ChhhHHHHHHHhcchHHHhhccCCCcccc
Q 000521 658 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYI 723 (1446)
Q Consensus 658 ~~~~G~i~~~~-------------~i~yv~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~~~~gd~t~i 723 (1446)
++.+|.|.++| .||.|||+..|||.|+..||.+|++- .++...++.++.++.+.|+.+|+|++|.|
T Consensus 314 D~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~V 393 (497)
T COG5265 314 DVNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGV 393 (497)
T ss_pred CCcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhccc
Confidence 99999999998 39999999999999999999999874 56778889999999999999999999999
Q ss_pred cCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEe
Q 000521 724 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMD 803 (1446)
Q Consensus 724 g~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~ 803 (1446)
||+|-.||||+|||||+||++.++|+|++|||.|||||.+|++.|... +.. ..+|+|.+++.||++.+-.||.|+||+
T Consensus 394 gerglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~-l~~-~~~~rttlviahrlsti~~adeiivl~ 471 (497)
T COG5265 394 GERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAA-LRE-VSAGRTTLVIAHRLSTIIDADEIIVLD 471 (497)
T ss_pred chheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHH-HHH-HhCCCeEEEEeehhhhccCCceEEEee
Confidence 999999999999999999999999999999999999999999999876 433 568999999999999999999999999
Q ss_pred CCEEEEecChhHHHhccccCcc
Q 000521 804 KGQVKWIGSSADLAVSLYSGFW 825 (1446)
Q Consensus 804 ~G~i~~~g~~~~l~~~~~~~~~ 825 (1446)
+|+|+|.|+|+|++..++.+.+
T Consensus 472 ~g~i~erg~h~~ll~~~g~ya~ 493 (497)
T COG5265 472 NGRIVERGTHEELLAAGGLYAE 493 (497)
T ss_pred CCEEEecCcHHHHHHcCChHHH
Confidence 9999999999999988765543
No 102
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=5.5e-50 Score=462.03 Aligned_cols=442 Identities=26% Similarity=0.373 Sum_probs=341.4
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------- 668 (1446)
..+++++.+-.|+. -.+++||||++++||+.++.|.||+|||||++.|.|.++|++|+|.++|
T Consensus 3 ~~l~~~~itK~f~~------~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA 76 (501)
T COG3845 3 PALEMRGITKRFPG------VVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDA 76 (501)
T ss_pred ceEEEeccEEEcCC------EEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHH
Confidence 46788999888862 2359999999999999999999999999999999999999999999998
Q ss_pred ---eEEEEcCCCCCCCc-cHHHHHhcCCCC------C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000521 669 ---SIAYVPQVPWILSG-TIRDNILFGKNY------D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~~~-ti~~nI~~g~~~------~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 734 (1446)
.||.|.|++-|++. ||.|||..|.+- | .++.++..+.++|+-|.+ ++...||=||
T Consensus 77 ~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~-----------~~V~dLsVG~ 145 (501)
T COG3845 77 IRLGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPD-----------AKVADLSVGE 145 (501)
T ss_pred HHcCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCcc-----------ceeecCCcch
Confidence 49999999998866 999999998753 2 245666777777766543 3455799999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecCh
Q 000521 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 813 (1446)
Q Consensus 735 kqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~ 813 (1446)
||||.|-+|||++|++||||||||.|-|...+++|+. +......|+|||+|||+++++.. ||++-||++|+++..-+
T Consensus 146 qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~-l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~- 223 (501)
T COG3845 146 QQRVEILKALYRGARLLILDEPTAVLTPQEADELFEI-LRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVD- 223 (501)
T ss_pred hHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeec-
Confidence 9999999999999999999999999999999999986 33325578999999999999776 99999999999753211
Q ss_pred hHHHhccccCcccccccchhhhhhhhhhhhcccchhhhhhhhccccccCCcchhHHHHHHHHhcCcchhHhHHHHHhhhh
Q 000521 814 ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG 893 (1446)
Q Consensus 814 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g 893 (1446)
.. + +. .. ++-. .
T Consensus 224 -~~-----------~---------------------------~~-------t~-----~ela-----~------------ 235 (501)
T COG3845 224 -PV-----------A---------------------------ET-------TE-----EELA-----E------------ 235 (501)
T ss_pred -CC-----------C---------------------------CC-------CH-----HHHH-----H------------
Confidence 00 0 00 00 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 894 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 973 (1446)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ 973 (1446)
++
T Consensus 236 ------------lM------------------------------------------------------------------ 237 (501)
T COG3845 236 ------------LM------------------------------------------------------------------ 237 (501)
T ss_pred ------------Hh------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHH
Q 000521 974 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1053 (1446)
Q Consensus 974 ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~ 1053 (1446)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 000521 1054 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII 1133 (1446)
Q Consensus 1054 ~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~ 1133 (1446)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCC
Q 000521 1134 SFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDW 1213 (1446)
Q Consensus 1134 ~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~w 1213 (1446)
+ + ... . .+.+ .++.-
T Consensus 238 -------v-G--~~v--~----------------------------------------------~~~~-------~~~~~ 252 (501)
T COG3845 238 -------V-G--REV--V----------------------------------------------LRVV-------KPPST 252 (501)
T ss_pred -------c-C--Ccc--c----------------------------------------------cccc-------cCCCC
Confidence 0 0 000 0 0000 01111
Q ss_pred CCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeC-CCCChHhH
Q 000521 1214 PFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNI-INTPVRDL 1292 (1446)
Q Consensus 1214 p~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di-~~i~~~~l 1292 (1446)
|..-.++++|++..-+.+ -+.+++|||+|++||.+||.|-.|-|-|-|+.+|.|+..+.+|+|.++|.|+ ...+....
T Consensus 253 pg~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~ 331 (501)
T COG3845 253 PGEVVLEVEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRER 331 (501)
T ss_pred CCCeEEEEeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHH
Confidence 223468999999865432 3689999999999999999999999999999999999999999999999997 66677777
Q ss_pred hc-ceEEEeCCCC----CCCCcHHHhcCCCCCCCh-----H-HHHHHHHHccHHHHHHhC-----CCchhhhcCCCCCCh
Q 000521 1293 RG-RFAVVPQSPF----LFEGSLRDNLDPFHMNDD-----L-KIWSVLEKCHVKEEVEAV-----GLETFVKESGISFSV 1356 (1446)
Q Consensus 1293 R~-~i~~VpQdp~----lF~gTIR~NLdp~~~~~d-----~-ei~~aL~~~~L~~~i~~l-----gLdt~v~e~G~~LSg 1356 (1446)
|+ .+++||.|.. ..+-|+.||+-+.....+ - -=|+++++ ...+.++++ +.++++ .+|||
T Consensus 332 r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~-~a~~li~~fdVr~~~~~~~a----~~LSG 406 (501)
T COG3845 332 RRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRK-FARELIEEFDVRAPSPDAPA----RSLSG 406 (501)
T ss_pred HhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHH-HHHHHHHHcCccCCCCCcch----hhcCC
Confidence 65 5999999995 456699999854322111 0 00122221 123344444 333333 37999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEec
Q 000521 1357 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISF 1434 (1446)
Q Consensus 1357 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~ 1434 (1446)
|+.|++-+||-+.++|++||..+||-+||..+.+.|.+.|.+.. +|+.|++|+-.|+.+.. ||||.||.+|+++....
T Consensus 407 GNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~~~~ 486 (501)
T COG3845 407 GNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVGIVP 486 (501)
T ss_pred cceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceecccc
Confidence 99999999999999999999999999999999999998887664 69999999999999875 99999999999998776
Q ss_pred cch
Q 000521 1435 ICR 1437 (1446)
Q Consensus 1435 ~~~ 1437 (1446)
|+.
T Consensus 487 ~~~ 489 (501)
T COG3845 487 PEE 489 (501)
T ss_pred ccc
Confidence 653
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.2e-50 Score=461.14 Aligned_cols=223 Identities=34% Similarity=0.620 Sum_probs=213.7
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
|.|+|+|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ .+|+|.+||+|+.+++..++|+++
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5799999999997656679999999999999999999999999999999999998 789999999999999999999999
Q ss_pred EEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1297 AVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1297 ~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+||||+|.+|++|+++|+++++..++++++++++.+++.++++.+ ++|+.++++|.+||+|||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999988777889999999999999999987 999999999999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhhh
Q 000521 1375 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYFI 1440 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~~ 1440 (1446)
|||||||++||+++++.+++.|++.+++||+|+||||++++..||||++|++|+++|+|+|.++.-
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~ 225 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLN 225 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhh
Confidence 999999999999999999999998888999999999999999999999999999999999987643
No 104
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-48 Score=456.53 Aligned_cols=226 Identities=27% Similarity=0.371 Sum_probs=202.0
Q ss_pred CCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCceEEEcCeeC
Q 000521 1210 SPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNI 1284 (1446)
Q Consensus 1210 ~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di 1284 (1446)
+.+||..|.|+|+|++++|++..+++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.|||+|+
T Consensus 72 ~~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i 151 (329)
T PRK14257 72 KEDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNT 151 (329)
T ss_pred cCCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEc
Confidence 34699999999999999997555679999999999999999999999999999999999997 5799999999999
Q ss_pred C--CCChHhHhcceEEEeCCCCCCCCcHHHhcCCC---CCCChHHH-----HHHHHHccHHHHHHhCCCchhhhcCCCCC
Q 000521 1285 I--NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF---HMNDDLKI-----WSVLEKCHVKEEVEAVGLETFVKESGISF 1354 (1446)
Q Consensus 1285 ~--~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~---~~~~d~ei-----~~aL~~~~L~~~i~~lgLdt~v~e~G~~L 1354 (1446)
. +++...+|++++||||+|++|++|+++|++++ ...++++. .++++.+++++ ++++.+++.|.+|
T Consensus 152 ~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----~l~~~~~~~~~~L 226 (329)
T PRK14257 152 RSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWD-----EVKDDLDKAGNAL 226 (329)
T ss_pred cccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcc-----hhhhhhhCCcccC
Confidence 7 45667899999999999999999999999843 23444444 44556665543 4567889999999
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEe
Q 000521 1355 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1355 SgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~ 1433 (1446)
|||||||+|||||++++|+|||||||||+||+++.+.+++.|++.++++|+|+|||+++++.+ ||||+||++|+|+|.|
T Consensus 227 SgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g 306 (329)
T PRK14257 227 SGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAG 306 (329)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999998889999999999999998 9999999999999999
Q ss_pred ccchhhh
Q 000521 1434 FICRYFI 1440 (1446)
Q Consensus 1434 ~~~~~~~ 1440 (1446)
+|..+|.
T Consensus 307 ~~~~l~~ 313 (329)
T PRK14257 307 ETKTIFI 313 (329)
T ss_pred CHHHHhc
Confidence 9998763
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-45 Score=382.07 Aligned_cols=216 Identities=27% Similarity=0.392 Sum_probs=185.1
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCC-CCChHhHhcce
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII-NTPVRDLRGRF 1296 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~-~i~~~~lR~~i 1296 (1446)
.|+++||+.+|.+. .||||||++|++||.+.||||||||||||+++|.++-+|++|+|.|||.++. ..+...+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 48999999999754 6999999999999999999999999999999999999999999999998874 34789999999
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~----~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1371 (1446)
|+|+|+..||+- |+-||+.... ..+.+|-.+ + ..+.++..||......-..+||||||||+||||||.-+
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~---~--A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~ 154 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEARE---K--ALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMD 154 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHH---H--HHHHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCC
Confidence 999999999986 9999986432 122222111 1 11223333565666667789999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhhh
Q 000521 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYFI 1440 (1446)
Q Consensus 1372 ~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~~ 1440 (1446)
|+|+++|||||+||+|.-..+.+++++.. .|.|+|+|||.+...++ +|||+.||+|+++|.|+|..+|.
T Consensus 155 P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~ 225 (240)
T COG1126 155 PKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFD 225 (240)
T ss_pred CCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhc
Confidence 99999999999999999999999998875 58899999999999987 79999999999999999998774
No 106
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-45 Score=396.41 Aligned_cols=217 Identities=29% Similarity=0.428 Sum_probs=186.2
Q ss_pred EEEEEEEEEecCC---CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCC---hHhH
Q 000521 1219 IEFQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDL 1292 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---~~~l 1292 (1446)
|+++||++.|+.. ...+|+||||+|++||..||+|+||||||||++++.++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999763 346999999999999999999999999999999999999999999999999987766 5566
Q ss_pred hcceEEEeCCCCCCC-CcHHHhcCCC---CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000521 1293 RGRFAVVPQSPFLFE-GSLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1446)
Q Consensus 1293 R~~i~~VpQdp~lF~-gTIR~NLdp~---~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1368 (1446)
|++||+|+|++-|++ -|+.+|+.+- ...+.+|+.+- ..+.++-.||...-+....+||||||||++|||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~R-----V~elLelVgL~dk~~~yP~qLSGGQKQRVaIARAL 156 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQR-----VAELLELVGLSDKADRYPAQLSGGQKQRVAIARAL 156 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHH-----HHHHHHHcCChhhhccCchhcCcchhhHHHHHHHH
Confidence 789999999999998 6999999743 12344444321 11222222777777778889999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhhh
Q 000521 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYFI 1440 (1446)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~~ 1440 (1446)
..+|+||+.|||||+||++|.+.|.+.|++.- -|-|+++|||.++.+++ ||||.||++|+|+|.|+.-++|.
T Consensus 157 a~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~ 231 (339)
T COG1135 157 ANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFA 231 (339)
T ss_pred hcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhc
Confidence 99999999999999999999999999887653 38899999999999987 99999999999999999988874
No 107
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.4e-43 Score=409.00 Aligned_cols=201 Identities=24% Similarity=0.333 Sum_probs=162.5
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.|.|+||+|.|+++ +..+++++|-|.++++|++|||+|+|||||++++.+.+.|..|.|.-.-. -+++
T Consensus 389 vi~~~nv~F~y~~~-~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H-----------~~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDN-PMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH-----------NKLP 456 (614)
T ss_pred eEEEeccccCCCCc-chhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc-----------ccch
Confidence 59999999999765 48999999999999999999999999999999999999999998864321 2233
Q ss_pred EEeCC---CCCCCCcHHHhcCC-CC-CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1298 VVPQS---PFLFEGSLRDNLDP-FH-MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1298 ~VpQd---p~lF~gTIR~NLdp-~~-~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
+--|. -.-++-|.-+|+.| +. ....+++...|.++||.... .+.++ .+||+|||.|+++||.+++.|
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~----q~~p~----~~LS~Gqr~rVlFa~l~~kqP 528 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDA----QVVPM----SQLSDGQRRRVLFARLAVKQP 528 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccc----cccch----hhcccccchhHHHHHHHhcCC
Confidence 33343 33456677777644 23 34567788888888876321 22333 379999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhhhhh
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYFIFL 1442 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~~~~ 1442 (1446)
.||+|||||++||.+|-....++|.+ |. .+||+|+|+...|.. +++|.+.++|.+.. .+++|.+|.
T Consensus 529 ~lLlLDEPtnhLDi~tid~laeaiNe-~~-Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~--~~G~i~~yk 595 (614)
T KOG0927|consen 529 HLLLLDEPTNHLDIETIDALAEAINE-FP-GGVVLVSHDFRLISQVAEEIWVCENGTVTK--WDGDIEIYK 595 (614)
T ss_pred cEEEecCCCcCCCchhHHHHHHHHhc-cC-CceeeeechhhHHHHHHHHhHhhccCceee--cCccHHHHH
Confidence 99999999999999999999999975 44 489999999999987 79999999999864 567777773
No 108
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-44 Score=372.11 Aligned_cols=216 Identities=30% Similarity=0.419 Sum_probs=195.5
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCC-----ceEEEcCeeCCC--CCh
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG-----GQILVDGLNIIN--TPV 1289 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~-----G~I~IDG~di~~--i~~ 1289 (1446)
..++++|+++.|.. ..+|+|||++|++++.+|++|||||||||++++|.|+.+..+ |+|.+||.||.+ ++.
T Consensus 6 ~~~~~~~l~~yYg~--~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGD--KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECc--hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 46899999999974 469999999999999999999999999999999999999875 999999999976 689
Q ss_pred HhHhcceEEEeCCCCCCCCcHHHhcCCCCC----C---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1290 ~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~----~---~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
.+||+++|+|.|.|.-|+.||+||+.++-. . -|+.+.++|+++.||+.+.. .+.+.+..|||||+|||
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-----rL~~sa~~LSGGQQQRL 158 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-----RLHKSALGLSGGQQQRL 158 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-----HhhCCccCCChhHHHHH
Confidence 999999999999999999999999986521 1 24557889999999998864 45566778999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||||.-+|+||+||||||+||+-+...|.+.|.+..++-||++|||.+.-... +|+...+-.|+++|+|.-...|
T Consensus 159 cIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 159 CIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 9999999999999999999999999999999999998899999999999987654 7999999999999999877666
No 109
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-43 Score=414.44 Aligned_cols=262 Identities=22% Similarity=0.301 Sum_probs=217.2
Q ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhhhcCCCCcccCCCccCCCCCceEE
Q 000521 524 HQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVI 603 (1446)
Q Consensus 524 ~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 603 (1446)
+.++++++|+++++++.+..|+..+|..... ..|+++|+..++.+...... . .+....++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~i~ 82 (329)
T PRK14257 23 NELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKE--D-----------FNHANVFE 82 (329)
T ss_pred chhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccC--C-----------CCcCceEE
Confidence 4789999999999999999999887765433 56999998765532210000 0 12335799
Q ss_pred EEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEeC----------
Q 000521 604 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG---------- 668 (1446)
Q Consensus 604 ~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~-----~~~G~i~~~~---------- 668 (1446)
++|+++.|.... +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 83 ~~nls~~y~~~~----~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~ 158 (329)
T PRK14257 83 IRNFNFWYMNRT----KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISS 158 (329)
T ss_pred EEeeEEEecCCC----ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 999999996421 246999999999999999999999999999999999996 5799987643
Q ss_pred -----eEEEEcCCCCCCCccHHHHHhcCCCCC----hh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000521 669 -----SIAYVPQVPWILSGTIRDNILFGKNYD----PQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1446)
Q Consensus 669 -----~i~yv~Q~p~l~~~ti~~nI~~g~~~~----~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 735 (1446)
.++||||+||++++|++|||.|+..++ ++ .|+++++.|+|..+++ +.++++|.+||||||
T Consensus 159 ~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~-------~~~~~~~~~LSgGqk 231 (329)
T PRK14257 159 LELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVK-------DDLDKAGNALSGGQQ 231 (329)
T ss_pred HhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhh-------hhhhCCcccCCHHHH
Confidence 599999999999999999999874322 22 2677888898866543 678999999999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChh
Q 000521 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 814 (1446)
Q Consensus 736 qRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~ 814 (1446)
|||+||||++++|+|+||||||||||+++.+++.+. +.. +.+++|+|+|||+++++.. ||+|++|++|+|++.|+++
T Consensus 232 qRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~-i~~-l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~ 309 (329)
T PRK14257 232 QRLCIARAIALEPEVLLMDEPTSALDPIATAKIEEL-ILE-LKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETK 309 (329)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999986654 554 5567899999999999887 9999999999999999999
Q ss_pred HHHh
Q 000521 815 DLAV 818 (1446)
Q Consensus 815 ~l~~ 818 (1446)
++..
T Consensus 310 ~l~~ 313 (329)
T PRK14257 310 TIFI 313 (329)
T ss_pred HHhc
Confidence 9864
No 110
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.1e-42 Score=386.84 Aligned_cols=219 Identities=52% Similarity=0.887 Sum_probs=205.7
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
|.++++|++++|+....++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 56899999999975445799999999999999999999999999999999999999999999999999988988999999
Q ss_pred EEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1297 AVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1297 ~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+|+||+|.+|++|+++|++++....++++.++++..++.+.+..+ |+++.+++.+.+||+|||||++||||++++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999987666777889999999999998876 999999988999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEecc
Q 000521 1375 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFI 1435 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~ 1435 (1446)
++|||||++||+.+.+.+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|.+
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999987778999999999999999999999999999998764
No 111
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=3.1e-42 Score=393.70 Aligned_cols=225 Identities=42% Similarity=0.706 Sum_probs=208.8
Q ss_pred CCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhc
Q 000521 1215 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRG 1294 (1446)
Q Consensus 1215 ~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~ 1294 (1446)
..|.|+++|++++|+.....+|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 46789999999999754356999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1295 RFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1295 ~i~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
+++|+||+|.+|++|+++|+++.....+++++++++.+++.+.++.+ |+++.+++.+.+||+|||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876544566788899999999988888 9999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++|+|||||++||+++.+.+.+.+++..+++|+|++||+++.+..||||++|++|++++.|.+..+.
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 242 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLL 242 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999998876789999999999999999999999999999998876543
No 112
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.1e-41 Score=385.29 Aligned_cols=221 Identities=34% Similarity=0.535 Sum_probs=202.7
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|+++|++++|+....++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57999999996544579999999999999999999999999999999999999999999999999998888889999999
Q ss_pred EeCCCCCCCCcHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000521 1299 VPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1446)
Q Consensus 1299 VpQdp~lF~gTIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1375 (1446)
+||++.+|+.|+++|+..... .+.+++.++++..++.+.++.+ |+++..+..+.+||||||||++||||++++|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 999999999999999986543 3455677778888888888888 8898888888999999999999999999999999
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1376 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1376 lLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||||++||..+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|++..++
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 224 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELL 224 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999877789999999999999889999999999999999887654
No 113
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.2e-41 Score=376.48 Aligned_cols=207 Identities=45% Similarity=0.837 Sum_probs=187.6
Q ss_pred CCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhH
Q 000521 1213 WPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL 1292 (1446)
Q Consensus 1213 wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l 1292 (1446)
||..+.++++|++++|+....++++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+...+
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 89999999999999997543479999999999999999999999999999999999999999999999999998888889
Q ss_pred hcceEEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1293 RGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1293 R~~i~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
|++++|+||+|.+|++|+++|+.++...+++++.++++ +++....||+||+||++||||++++|
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~----------------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR----------------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh----------------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999998765444444443332 24456789999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEecc
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFI 1435 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~ 1435 (1446)
+++||||||++||+++.+.+.+.|++..+++|+|+|||+++.+..||++++|++|++++.|+|
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999987778999999999999988999999999999998875
No 114
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-42 Score=358.34 Aligned_cols=201 Identities=27% Similarity=0.365 Sum_probs=172.8
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.|+++|++-+|.. ..+|+|||++|++||.++|+|||||||||||++|.|+.+|++|+|.++|
T Consensus 2 mi~i~~l~K~fg~------~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~ 75 (240)
T COG1126 2 MIEIKNLSKSFGD------KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKL 75 (240)
T ss_pred eEEEEeeeEEeCC------eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHH
Confidence 3678888887753 2359999999999999999999999999999999999999999999998
Q ss_pred --eEEEEcCCCCCCCc-cHHHHHhcCC----CCC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 --SIAYVPQVPWILSG-TIRDNILFGK----NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 --~i~yv~Q~p~l~~~-ti~~nI~~g~----~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
++|+|+|+..||+. ||.|||..+. ..+ +++-.+.++..+|.+-.+..| ..||||||||
T Consensus 76 R~~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQR 144 (240)
T COG1126 76 RRKVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQR 144 (240)
T ss_pred HHhcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHH
Confidence 37899999999976 9999999763 222 234556677777776666555 4899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHH
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 816 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 816 (1446)
|||||||..+|+++|+|||||||||+....+++- +......|.|.|+|||.+.+.+. ||||+.|++|+|+++|+++++
T Consensus 145 VAIARALaM~P~vmLFDEPTSALDPElv~EVL~v-m~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~ 223 (240)
T COG1126 145 VAIARALAMDPKVMLFDEPTSALDPELVGEVLDV-MKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEF 223 (240)
T ss_pred HHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHH-HHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHH
Confidence 9999999999999999999999999999988875 33324567899999999999987 999999999999999999988
Q ss_pred Hhc
Q 000521 817 AVS 819 (1446)
Q Consensus 817 ~~~ 819 (1446)
..+
T Consensus 224 f~~ 226 (240)
T COG1126 224 FDN 226 (240)
T ss_pred hcC
Confidence 543
No 115
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.4e-42 Score=361.91 Aligned_cols=214 Identities=31% Similarity=0.433 Sum_probs=184.7
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|+|+|||++|.+ ..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++..+||++|||
T Consensus 2 I~~~nvsk~y~~--~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGN--KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCC--ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 799999999973 479999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCC-cHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCch--hhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1299 VPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET--FVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1299 VpQdp~lF~g-TIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt--~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
|=|..-||+- ||.+|+..-. ..+.+++.+- .++.+...|||. ....-...|||||+||+.+||||..+|
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r-----~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP 154 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKR-----ADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADP 154 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHH-----HHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCC
Confidence 9999999986 9999986321 2344444322 223333337774 344556789999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhH-hhcCEEEEEeCCEEEEEeccchhh
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTV-LNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti-~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+|+++|||.++||+-|...+|+-+.+..+ ++|+|+|||+++.. +-+|||.||++|+++.+|+|.+..
T Consensus 155 ~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il 224 (309)
T COG1125 155 PILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEIL 224 (309)
T ss_pred CeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHH
Confidence 99999999999999999999998866532 89999999999975 558999999999999999998654
No 116
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-41 Score=393.56 Aligned_cols=220 Identities=24% Similarity=0.348 Sum_probs=187.5
Q ss_pred CCccEEEEEEEEEecCCC---CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCC----
Q 000521 1215 FQGLIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT---- 1287 (1446)
Q Consensus 1215 ~~g~I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i---- 1287 (1446)
....|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.+.
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 344699999999997432 3699999999999999999999999999999999999999999999999998753
Q ss_pred ------------ChHhHhcceEEEeCCC--CCCCCcHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCc-hhhhc
Q 000521 1288 ------------PVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKE 1349 (1446)
Q Consensus 1288 ------------~~~~lR~~i~~VpQdp--~lF~gTIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e 1349 (1446)
+...+|++++||+|+| .+|++|+++|+.++.. .++++. .++ ..+.++.+|++ ...+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~---~~~--~~~~l~~~gL~~~~~~~ 172 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEA---KKL--AKFYLNKMGLDDSYLER 172 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHH---HHH--HHHHHHHcCCChhHhcC
Confidence 3567899999999998 6899999999965421 223322 222 23455556886 56778
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHh-hcCEEEEEeCC
Q 000521 1350 SGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHG 1427 (1446)
Q Consensus 1350 ~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~~G 1427 (1446)
.+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .||||++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 888999999999999999999999999999999999999999999998653 5899999999999875 59999999999
Q ss_pred EEEEEeccchhh
Q 000521 1428 HLVCISFICRYF 1439 (1446)
Q Consensus 1428 ~vvE~~~~~~~~ 1439 (1446)
++++.|++..++
T Consensus 253 ~i~~~g~~~~~~ 264 (320)
T PRK13631 253 KILKTGTPYEIF 264 (320)
T ss_pred EEEEeCCHHHHh
Confidence 999999988654
No 117
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.3e-40 Score=417.57 Aligned_cols=198 Identities=24% Similarity=0.344 Sum_probs=164.0
Q ss_pred CCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCC-C
Q 000521 1231 SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--ICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF-E 1307 (1446)
Q Consensus 1231 ~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~--~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF-~ 1307 (1446)
+....|+|||=-++||...|++|.||||||||++.|.+=.. ..+|+|+|||.+..+ +..++++|||.|++.-. .
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 34568999999999999999999999999999999997643 247999999998765 78899999999988644 4
Q ss_pred CcHHHhcCCC------CCCChHH----HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC-CEEE
Q 000521 1308 GSLRDNLDPF------HMNDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS-KVLC 1376 (1446)
Q Consensus 1308 gTIR~NLdp~------~~~~d~e----i~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~-~ILl 1376 (1446)
-||||-|.+. .+.+++| +.++++..+|.+.- |..||.-|..||..||.|+.||=-|..|| .||.
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-----daiVG~~G~GLs~eQRKrLTIgVELvA~P~~ilF 953 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-----DALVGLPGSGLSTEQRKRLTIGVELVANPSSILF 953 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-----hhhccCCCCCCCHHHhceeeEEEEEecCCceeEE
Confidence 5999998542 2334433 44555555555443 45677777889999999999999999999 8999
Q ss_pred EeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchh--HhhcCEEEEEeC-CEEEEEeccc
Q 000521 1377 LDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST--VLNMDEILILDH-GHLVCISFIC 1436 (1446)
Q Consensus 1377 LDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~t--i~~~DrIlvl~~-G~vvE~~~~~ 1436 (1446)
||||||+||+++...|.+.+|+.. .|+||++.-|+++. .+.+|+++.|++ |+.|-+|.+.
T Consensus 954 LDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG 1017 (1391)
T KOG0065|consen 954 LDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLG 1017 (1391)
T ss_pred ecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcc
Confidence 999999999999999999999875 69999999999985 357999999975 7899887764
No 118
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-40 Score=375.89 Aligned_cols=221 Identities=33% Similarity=0.542 Sum_probs=202.3
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|+++|++++|+....++++|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999996543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EeCCCCCCCCcHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000521 1299 VPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1446)
Q Consensus 1299 VpQdp~lF~gTIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1375 (1446)
+||+|.+|+.|++||+..+.. .+.+++.+.++.+++.+.++.+ |+++..+....+||+|||||++||||++++|+++
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999986543 3455667778888898888887 8888888888899999999999999999999999
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1376 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1376 lLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||||++||..+.+.+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|++..+.
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 224 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELL 224 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHH
Confidence 9999999999999999999999887889999999999999999999999999999999887654
No 119
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-40 Score=373.97 Aligned_cols=222 Identities=38% Similarity=0.612 Sum_probs=203.7
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
|.|+++|++++|+. ..++++|+||+|++||+++|+|++|||||||+++|.|+++|.+|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDE-KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCC-CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 46899999999963 23699999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEeCCCCCCCCcHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1297 AVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1297 ~~VpQdp~lF~gTIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
+|+||+|.+|++|+++|+..+.. ..++++.++++.+++.+.++.+ |+++.++....+||+|||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999986543 3456778888999999888887 89999988888999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1374 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+|||||||++||..+.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|.+..+.
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~ 225 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELL 225 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 999999999999999999999998876789999999999999899999999999999988876554
No 120
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=7.9e-41 Score=392.53 Aligned_cols=212 Identities=24% Similarity=0.383 Sum_probs=182.5
Q ss_pred EEEEEEEEEecCC--CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHh---Hh
Q 000521 1219 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1293 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR 1293 (1446)
|+++||+++|+.+ ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cceEEEeCCCCCCC-CcHHHhcCCCC---CCChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000521 1294 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1365 (1446)
Q Consensus 1294 ~~i~~VpQdp~lF~-gTIR~NLdp~~---~~~d~----ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1365 (1446)
++|++|||++.+|+ .|+++|+.+.. ..+.+ ++.++++.+ |++.........||||||||++||
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~v---------gL~~~~~~~~~~LSgGqkQRV~IA 152 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALV---------GLGDKHDSYPSNLSGGQKQRVAIA 152 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc---------CCchhhhCChhhCCHHHHHHHHHH
Confidence 89999999999996 69999996421 12222 233444444 554445556678999999999999
Q ss_pred HHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|||+.+|+||+||||||+||+++.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+++|.|++.++|
T Consensus 153 RAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 153 RALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIF 229 (343)
T ss_pred HHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999988643 7899999999999966 9999999999999999988775
No 121
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=2.1e-40 Score=370.48 Aligned_cols=217 Identities=37% Similarity=0.524 Sum_probs=197.3
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
|.++++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999964334699999999999999999999999999999999999999999999999999888887888999
Q ss_pred EEEeCCCCCCCCcHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1297 AVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1297 ~~VpQdp~lF~gTIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
+|+||+|.+|..|+++|+..... .+++++.++++..++.+.++.. |+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998999999976432 3455677888999998888776 89998888888999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEe
Q 000521 1374 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~ 1433 (1446)
+|||||||++||.++.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999876668999999999988889999999999998764
No 122
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.2e-41 Score=365.71 Aligned_cols=208 Identities=27% Similarity=0.401 Sum_probs=181.7
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.|+++|++++|+.. +||+||||+|++||.+||+||+|||||||+++++|+++|++|+|.++|.+++.... |.+||
T Consensus 4 ~i~v~nl~v~y~~~--~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR--PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE--eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 59999999999755 49999999999999999999999999999999999999999999999998876543 57899
Q ss_pred EEeCCC---CCCCCcHHHhcCCCC-----------CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000521 1298 VVPQSP---FLFEGSLRDNLDPFH-----------MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1363 (1446)
Q Consensus 1298 ~VpQdp---~lF~gTIR~NLdp~~-----------~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1363 (1446)
||||.. +-|+-||+|-+..+. ..+.+++.+||+++|++++. |-+++ .|||||+||+.
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-----~r~i~----~LSGGQ~QRV~ 149 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-----DRQIG----ELSGGQKQRVL 149 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-----CCccc----ccCcHHHHHHH
Confidence 999955 358899999986542 11247889999999998764 34454 59999999999
Q ss_pred HHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhhh
Q 000521 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYFI 1440 (1446)
Q Consensus 1364 LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~-~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~~ 1440 (1446)
|||||+++|++|+|||||+++|+.++..+.+.|.+..+ ||||++|+|+++.+.+ +|+|+.|+ +++...|.|+..+-
T Consensus 150 lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~~ 227 (254)
T COG1121 150 LARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVLT 227 (254)
T ss_pred HHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhccC
Confidence 99999999999999999999999999999999988754 9999999999999876 89999995 56788898887654
No 123
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=7e-41 Score=368.89 Aligned_cols=211 Identities=27% Similarity=0.393 Sum_probs=184.6
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++|++++|+ ..++|+|+||+|++||.++|+||+|||||||+++|.|+++|.+|+|.+||.|+.+++.+++-++++
T Consensus 2 ~L~~~~ls~~y~--~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYG--GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEEC--CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 478999999997 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCC-CCCcHHHhcCCC--------CCCC--hH-HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000521 1298 VVPQSPFL-FEGSLRDNLDPF--------HMND--DL-KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1365 (1446)
Q Consensus 1298 ~VpQdp~l-F~gTIR~NLdp~--------~~~~--d~-ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1365 (1446)
||||++.. |.-||+|-+..+ ...+ |+ .+.+||+.+++.++.+. .-..||||||||+.||
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r---------~~~~LSGGerQrv~iA 150 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADR---------PVDELSGGERQRVLIA 150 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcC---------cccccChhHHHHHHHH
Confidence 99999754 555998887533 2112 33 46778888888776432 2235999999999999
Q ss_pred HHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhH-hhcCEEEEEeCCEEEEEeccchhh
Q 000521 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTV-LNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti-~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|||.++|+||+||||||+||....-.+.+.+++.. +++|+|+|.|+++.. +.||++++|++|+++..|+|...+
T Consensus 151 rALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 151 RALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999998875 479999999999865 568999999999999999998654
No 124
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.2e-40 Score=380.59 Aligned_cols=192 Identities=23% Similarity=0.322 Sum_probs=162.3
Q ss_pred CccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcc
Q 000521 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1295 (1446)
Q Consensus 1216 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1295 (1446)
...+++.+|+|.|.|+.++.++++++.++.-+++++||++|.||||+++++.+-..|..|.+-+.+ |.+
T Consensus 360 ~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 346999999999999877899999999999999999999999999999999999999999988865 889
Q ss_pred eEEEeCCCCCCCCcHHHhc---C----CCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCC-CCCChhHHHHHHHHHH
Q 000521 1296 FAVVPQSPFLFEGSLRDNL---D----PFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESG-ISFSVGQRQLICLARA 1367 (1446)
Q Consensus 1296 i~~VpQdp~lF~gTIR~NL---d----p~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G-~~LSgGQrQrl~LARA 1367 (1446)
|+|-.|.-+=| ..-|. | -+...+++|+.+.|... |++..+...+ ..||||||-|+++|-.
T Consensus 429 i~~f~Qhhvd~---l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~---------Gl~g~la~~si~~LSGGQKsrvafA~~ 496 (582)
T KOG0062|consen 429 IKYFAQHHVDF---LDKNVNAVDFMEKSFPGKTEEEIRRHLGSF---------GLSGELALQSIASLSGGQKSRVAFAAC 496 (582)
T ss_pred ecchhHhhhhH---HHHHhHHHHHHHHhCCCCCHHHHHHHHHhc---------CCCchhhhccccccCCcchhHHHHHHH
Confidence 99999987632 22222 1 11223788888777655 5565555444 4699999999999999
Q ss_pred hccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEE
Q 000521 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCI 1432 (1446)
Q Consensus 1368 LLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~ 1432 (1446)
.+.+|.+|||||||..||.++-..+-++|+. |.| -||+|+|+.+.+.. |+.++|.++|+|.-+
T Consensus 497 ~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~-F~G-GVv~VSHd~~fi~~~c~E~Wvve~g~vt~i 560 (582)
T KOG0062|consen 497 TWNNPHLLVLDEPTNHLDRDSLGALAKALKN-FNG-GVVLVSHDEEFISSLCKELWVVEDGKVTPI 560 (582)
T ss_pred hcCCCcEEEecCCCccccHHHHHHHHHHHHh-cCC-cEEEEECcHHHHhhcCceeEEEcCCcEEee
Confidence 9999999999999999999999999999975 554 79999999999986 899999999999764
No 125
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-40 Score=371.01 Aligned_cols=220 Identities=37% Similarity=0.611 Sum_probs=201.9
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++|++++|+.+ ..+|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 5789999999643 469999999999999999999999999999999999999999999999999999888889999999
Q ss_pred EeCCCCCCCCcHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000521 1299 VPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1446)
Q Consensus 1299 VpQdp~lF~gTIR~NLdp~~-~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1375 (1446)
+||+|.+|++|+++|+.... ..+++++.++++.+++.+.+..+ |+++.+.....+||+|||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999997653 34566778888889998888887 8999998888899999999999999999999999
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1376 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1376 lLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||||++||+++.+.+.+.|++..++.|+|+++|+++.+..||++++|++|++++.|.+..+.
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~ 223 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELL 223 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHh
Confidence 9999999999999999999998776688999999999999999999999999999988876553
No 126
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-40 Score=353.19 Aligned_cols=215 Identities=28% Similarity=0.435 Sum_probs=178.2
Q ss_pred cEEEEEEEEEecCCC--CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCC-ChHhHhc
Q 000521 1218 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT-PVRDLRG 1294 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i-~~~~lR~ 1294 (1446)
.++++|+++.|+... .++|+||||+|.+||.+||+|+||||||||.++|.|+.+|++|+|.+||.+.... +.+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999997542 2599999999999999999999999999999999999999999999999776543 3446778
Q ss_pred ceEEEeCCCC--CCC-CcHHHhcC-CCCC----CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000521 1295 RFAVVPQSPF--LFE-GSLRDNLD-PFHM----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1366 (1446)
Q Consensus 1295 ~i~~VpQdp~--lF~-gTIR~NLd-p~~~----~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1366 (1446)
.+.+|+|||. |=+ -||++-|. |... ...++++++|+.+||.+.. .......||||||||+||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~--------l~R~P~eLSGGQ~QRiaIAR 154 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSF--------LDRRPHELSGGQRQRIAIAR 154 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHH--------HhcCchhcChhHHHHHHHHH
Confidence 8999999997 222 26666552 3222 2344577788777765432 34456679999999999999
Q ss_pred HhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhhh
Q 000521 1367 ALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYFI 1440 (1446)
Q Consensus 1367 ALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~~ 1440 (1446)
||.-+|++||+|||||+||....+.|.+.+.+..+ +-|.|+|||+++.+.. ||||+||++|+++|.+.-..++.
T Consensus 155 AL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 155 ALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 99999999999999999999999999999887665 4599999999999986 99999999999999987766553
No 127
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.4e-40 Score=355.64 Aligned_cols=204 Identities=30% Similarity=0.425 Sum_probs=172.3
Q ss_pred EEEEEEEEEecCCC--CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChH---hHh
Q 000521 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLR 1293 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR 1293 (1446)
++++||+..|..+. ..+|+|+||+|++||.|+|+||||||||||+++|-++..|++|.|.++|.|+..++-+ .+|
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67999999996543 3699999999999999999999999999999999999999999999999999999853 344
Q ss_pred -cceEEEeCCCCCCCC-cHHHhcCC---CCCCCh----HHHHHHHHHccHHHHHHhCCCchhhh-cCCCCCChhHHHHHH
Q 000521 1294 -GRFAVVPQSPFLFEG-SLRDNLDP---FHMNDD----LKIWSVLEKCHVKEEVEAVGLETFVK-ESGISFSVGQRQLIC 1363 (1446)
Q Consensus 1294 -~~i~~VpQdp~lF~g-TIR~NLdp---~~~~~d----~ei~~aL~~~~L~~~i~~lgLdt~v~-e~G~~LSgGQrQrl~ 1363 (1446)
++||+|+|+..|++. |++||+.. +..... +...+.++. +||..... .....||||||||+|
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~---------lgl~~~~~~~~p~eLSGGqqQRVA 152 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEV---------LGLEDRLLKKKPSELSGGQQQRVA 152 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHh---------cCChhhhccCCchhcCHHHHHHHH
Confidence 579999999999876 99999863 222221 122222333 35654444 556789999999999
Q ss_pred HHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhhcCEEEEEeCCEEEE
Q 000521 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVC 1431 (1446)
Q Consensus 1364 LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE 1431 (1446)
|||||+.+|+|++.||||++||.+|.+.|.+.+++.. .++|+|+|||+......|||++.|.||++.+
T Consensus 153 IARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 153 IARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999998874 3789999999999999999999999999543
No 128
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=6.3e-40 Score=371.07 Aligned_cols=221 Identities=36% Similarity=0.567 Sum_probs=199.9
Q ss_pred EEEEEEEEEecCC-CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1219 IEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
++++|++++|+.. ..++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4789999999643 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEeCCCCCCCCcHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1298 VVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1298 ~VpQdp~lF~gTIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
|+||+|.+|+.|+++|+..... ...+++.+.++..++.+.+..+ |+++..+....+||+|||||++||||++++|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999976532 3455677778888888888877 888888888889999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1375 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|.+..+.
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 225 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELM 225 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999998776789999999999999999999999999999988776543
No 129
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.8e-40 Score=376.86 Aligned_cols=219 Identities=25% Similarity=0.340 Sum_probs=195.8
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|+... .++|+|+||+|++||+++|+|+||||||||+++|.|+++ .+|+|.++|
T Consensus 2 ~i~~~nls~~~~~~~----~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr 76 (275)
T cd03289 2 QMTVKDLTAKYTEGG----NAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWR 76 (275)
T ss_pred eEEEEEEEEEeCCCC----CcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHh
Confidence 478999999996321 236999999999999999999999999999999999998 799999987
Q ss_pred -eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccC
Q 000521 669 -SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 747 (1446)
Q Consensus 669 -~i~yv~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~ 747 (1446)
.|+||||+|++|++|++||+....++++++..++++.++|+..+..+|++++|.++++|.+||||||||++||||++++
T Consensus 77 ~~i~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~ 156 (275)
T cd03289 77 KAFGVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSK 156 (275)
T ss_pred hhEEEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 4899999999999999999964345677888999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHhccccCccc
Q 000521 748 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWS 826 (1446)
Q Consensus 748 ~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~~~~~~~~ 826 (1446)
|+|+||||||++||+.+.+.+.+. +.. ..+++|+|+|||+++.+..||+|++|++|++++.|+++++.+....+..+
T Consensus 157 p~illlDEpts~LD~~~~~~l~~~-l~~-~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~ 233 (275)
T cd03289 157 AKILLLDEPSAHLDPITYQVIRKT-LKQ-AFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQA 233 (275)
T ss_pred CCEEEEECccccCCHHHHHHHHHH-HHH-hcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHH
Confidence 999999999999999999887766 433 34578999999999999899999999999999999999998765444433
No 130
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.5e-40 Score=370.43 Aligned_cols=208 Identities=32% Similarity=0.457 Sum_probs=178.6
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCC-----CCCCceEEEcCeeCCCCC--hHh
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT-----PICGGQILVDGLNIINTP--VRD 1291 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~-----~~~~G~I~IDG~di~~i~--~~~ 1291 (1446)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++.+.+ ...
T Consensus 1 i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGD--KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 578999999964 36999999999999999999999999999999999999 999999999999998876 567
Q ss_pred HhcceEEEeCCCCCCCCcHHHhcCCCCC----CC----hHHHHHHHHHccHHHHHHhCCCchhhhcC--CCCCChhHHHH
Q 000521 1292 LRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKES--GISFSVGQRQL 1361 (1446)
Q Consensus 1292 lR~~i~~VpQdp~lF~gTIR~NLdp~~~----~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~--G~~LSgGQrQr 1361 (1446)
+|++++|+||++.+|..|+++|+.+... .. ++++.++++.. |++...... +.+||||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~~~LSgG~~qr 149 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKA---------ALWDEVKDRLHALGLSGGQQQR 149 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHc---------CCChHHhccCCcccCCHHHHHH
Confidence 8899999999999998899999975321 11 12233334433 554444433 46899999999
Q ss_pred HHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccch
Q 000521 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1362 l~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
++||||++++|++|||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|.+..
T Consensus 150 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 150 LCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCccc
Confidence 99999999999999999999999999999999999987655899999999998875 89999999999999998764
No 131
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=4.8e-37 Score=370.42 Aligned_cols=492 Identities=19% Similarity=0.206 Sum_probs=340.8
Q ss_pred HHHhhhhhHhhhhhcccCCC---CCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Q 000521 909 ASRNGNDLWLSYWVDTTGSS---QTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLF 985 (1446)
Q Consensus 909 ~~~~~~~~wl~~w~~~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~f 985 (1446)
......++|++.|.....+. .........+.+|.+++.+...+...+.++......+.-..+-+.++++-+... .|
T Consensus 57 l~~v~~~v~~~~w~~~~~~aL~~~d~~~f~~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~-~~ 135 (604)
T COG4178 57 LLSVRGQVLLNDWNGPFYNALARRDLAAFWQQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPR-RY 135 (604)
T ss_pred HHHhheeeeeHhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ch
Confidence 33344566777775432110 001112233567777777777777778888888888888888888998888777 44
Q ss_pred ccCCChh------HHHHHHHchhhhhccchHHHHHHHHHHHHHHHHhhhhHH--------------hHhH----HHHHHH
Q 000521 986 FDQTPGG------RILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLS--------------YVQV----FFLLLL 1041 (1446)
Q Consensus 986 f~~~~~G------~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~--------------~~~~----~~~~~~ 1041 (1446)
|.-...| ..=+|+.+|+...-+..-.....++.++++++....++. +..| +++++.
T Consensus 136 y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Y 215 (604)
T COG4178 136 YRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIY 215 (604)
T ss_pred HHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHH
Confidence 3333222 334688888877665544444445555444443333222 0111 111112
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000521 1042 VPFW-FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLW 1120 (1446)
Q Consensus 1042 ~pl~-~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w 1120 (1446)
++.. .+..++.+...+..-+..+.|..-|. ...-.-+....|-.|+.|+...++..+..+.-.+.+......+.+
T Consensus 216 a~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~----~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~ 291 (604)
T COG4178 216 AISASLLTHLIGRPLIRLNFERQKLEADFRY----SLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIR 291 (604)
T ss_pred HHHHHHHHHHHccccccccHHHHHHHHHHHH----HHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2211 12224445444444444555554443 344556677889999999888877777666666666555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcC--
Q 000521 1121 LSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV-- 1198 (1446)
Q Consensus 1121 l~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~-- 1198 (1446)
+...-...+-+.+.+-.+.+. ...-.+..+.|.++.+.....++.+.++|++..+.++.+-...+.|+.++.+.
T Consensus 292 l~~~~~gy~~~s~v~P~li~a----p~~f~g~i~~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~ 367 (604)
T COG4178 292 LTWFQLGYGWLSVVLPILIAA----PRYFSGQITFGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALE 367 (604)
T ss_pred hHHhhhhhhHHHHHHHHHhcc----HhhhcCcChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 554433333322211111111 01113456778888888888899999999999999999999999999998732
Q ss_pred ----CccccccCCCCCCC--CCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC
Q 000521 1199 ----PQEELCGYQSLSPD--WPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI 1272 (1446)
Q Consensus 1199 ----~~e~~~~~~~~~~~--wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~ 1272 (1446)
+++...... .... -..+..|+|+|++..-+++. ..|+++||+|+|||.+-|.|+||||||||+++|.|+.|-
T Consensus 368 ~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~nl~l~~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~ 445 (604)
T COG4178 368 AAQMDTEKPARTG-RRIDFDDNADHGITLENLSLRTPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPW 445 (604)
T ss_pred hccCcccccCccc-ccccccccccceeEEeeeeEECCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCcc
Confidence 222111100 0000 00147899999999987654 789999999999999999999999999999999999999
Q ss_pred CCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcC-CCCC--CChHHHHHHHHHccHHHHHHhC-CCchhhh
Q 000521 1273 CGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLD-PFHM--NDDLKIWSVLEKCHVKEEVEAV-GLETFVK 1348 (1446)
Q Consensus 1273 ~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLd-p~~~--~~d~ei~~aL~~~~L~~~i~~l-gLdt~v~ 1348 (1446)
-+|+|..-. -+++-++||.|.+-.||+||-|. |... ++|+++.++|.+|||.+.++++ +.+.
T Consensus 446 g~G~I~~P~-----------~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~~--- 511 (604)
T COG4178 446 GSGRISMPA-----------DSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEEDR--- 511 (604)
T ss_pred CCCceecCC-----------CCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccCc---
Confidence 999987631 24589999999999999999985 4333 7899999999999999999987 4443
Q ss_pred cCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeC
Q 000521 1349 ESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDH 1426 (1446)
Q Consensus 1349 e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~ 1426 (1446)
-..-||+|||||+++||.+|++|++++||||||+||.++|..+.+.++++..++|+|.|+||.....-.++.+-+++
T Consensus 512 -W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 512 -WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred -HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 33459999999999999999999999999999999999999999999999999999999999887776777666543
No 132
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.9e-40 Score=369.00 Aligned_cols=213 Identities=28% Similarity=0.409 Sum_probs=179.6
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh---HhHhcc
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1295 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1295 (1446)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 578999999963 369999999999999999999999999999999999999999999999999987764 567889
Q ss_pred eEEEeCCCCCCCC-cHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000521 1296 FAVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1446)
Q Consensus 1296 i~~VpQdp~lF~g-TIR~NLdp~~----~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1370 (1446)
++|+||++.+|++ |+++|+.... ..+.++..+. ..+.++.+|++.........||||||||++||||+++
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~ 153 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREI-----VLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALAL 153 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHH-----HHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 9999999999986 9999996531 1222222111 1223333455554555556899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1371 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
+|+||||||||++||.++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|.+..+
T Consensus 154 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 224 (235)
T cd03261 154 DPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEEL 224 (235)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHH
Confidence 9999999999999999999999999987643 7899999999998875 899999999999999987754
No 133
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.6e-40 Score=362.26 Aligned_cols=213 Identities=30% Similarity=0.449 Sum_probs=190.2
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCC-CCChHhHhcce
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII-NTPVRDLRGRF 1296 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~-~i~~~~lR~~i 1296 (1446)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.+++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 48999999999877 78999999999999999999999999999999999999999999999999998 48899999999
Q ss_pred EEEeCCC--CCCCCcHHHhcCCCCC---CChHH----HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000521 1297 AVVPQSP--FLFEGSLRDNLDPFHM---NDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1446)
Q Consensus 1297 ~~VpQdp--~lF~gTIR~NLdp~~~---~~d~e----i~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1446)
++|.|+| .+|..||.+.+.++.. .+.+| +.++|+.+++.+ .......+||||||||+|||.+
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~---------~~~r~p~~LSGGqkqRvaIA~v 152 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEE---------LLDRPPFNLSGGQKQRVAIAGV 152 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchh---------hccCCccccCCcceeeHHhhHH
Confidence 9999999 6999999999987643 23333 445566665543 3445567899999999999999
Q ss_pred hccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhhh
Q 000521 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYFI 1440 (1446)
Q Consensus 1368 LLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~~ 1440 (1446)
|..+|+|||||||||+||+...+.+.+.+++..+ ++|+|+|||+++.+.. |||++||++|+++..|.|..+|.
T Consensus 153 La~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~ 228 (235)
T COG1122 153 LAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFN 228 (235)
T ss_pred HHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhh
Confidence 9999999999999999999999999999988754 4799999999999988 99999999999999999987764
No 134
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-40 Score=361.17 Aligned_cols=206 Identities=28% Similarity=0.362 Sum_probs=172.9
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
|++++++..|... ......+|+|+||+|++||+.+|+|.||+|||||++++.++-.|++|+|.++|
T Consensus 2 I~l~~vsK~~~~~-~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 2 IELENVSKTFGQT-GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred eEEEeeeeeeccC-CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 6788999888753 22234579999999999999999999999999999999999999999999988
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCCC----ChhhHHH---HHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 ---SIAYVPQVPWILS-GTIRDNILFGKNY----DPQSYSE---TLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~~-~ti~~nI~~g~~~----~~~~~~~---v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
+||+++|++.|++ .||.|||.|..+. .++..++ .++..+|.+. .+....+||||||||
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk-----------~~~yP~qLSGGQKQR 149 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDK-----------ADRYPAQLSGGQKQR 149 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhh-----------hccCchhcCcchhhH
Confidence 5999999999997 6999999997542 2233444 4444455432 345567999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHH
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 816 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 816 (1446)
|+|||||..+|+|||.|||||||||+|.+.|++.+..-....|-|+++|||.++.++. |||+.+|++|+++++|+..++
T Consensus 150 VaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~v 229 (339)
T COG1135 150 VAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEV 229 (339)
T ss_pred HHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHh
Confidence 9999999999999999999999999999999986332213346799999999999987 999999999999999999887
Q ss_pred Hhc
Q 000521 817 AVS 819 (1446)
Q Consensus 817 ~~~ 819 (1446)
..+
T Consensus 230 F~~ 232 (339)
T COG1135 230 FAN 232 (339)
T ss_pred hcC
Confidence 543
No 135
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-40 Score=354.88 Aligned_cols=191 Identities=31% Similarity=0.390 Sum_probs=162.4
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--------eEEE
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAY 672 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~--------~i~y 672 (1446)
.+.+++++.+|.. ..+|+|+||+|++||+++|+|||||||||||++|.|+.+|++|+|.++| .+||
T Consensus 3 ~l~i~~v~~~f~~------~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~ 76 (248)
T COG1116 3 LLEIEGVSKSFGG------VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGY 76 (248)
T ss_pred eEEEEeeEEEeCc------eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEE
Confidence 4678888888863 3459999999999999999999999999999999999999999999987 5899
Q ss_pred EcCCCCCCCc-cHHHHHhcCCCCC-------hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHH
Q 000521 673 VPQVPWILSG-TIRDNILFGKNYD-------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 744 (1446)
Q Consensus 673 v~Q~p~l~~~-ti~~nI~~g~~~~-------~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARal 744 (1446)
|+|++-|++- ||+|||.+|.+.. .++.++.++.++|...-+..| ..|||||||||||||||
T Consensus 77 vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiARAL 145 (248)
T COG1116 77 VFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIARAL 145 (248)
T ss_pred EeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHHHH
Confidence 9999998875 9999999986541 246777888888876554444 58999999999999999
Q ss_pred ccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-hCCEEEEEeC--CEEE
Q 000521 745 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDK--GQVK 808 (1446)
Q Consensus 745 y~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~--G~i~ 808 (1446)
..+|+++||||||+|||+.|..++.+.+..-....++|+++|||++++.- -+|||++|.+ |+|.
T Consensus 146 ~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 146 ATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred hcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 99999999999999999999998887744322334689999999999855 5999999998 5553
No 136
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.2e-39 Score=365.71 Aligned_cols=215 Identities=35% Similarity=0.525 Sum_probs=194.3
Q ss_pred CCccEEEEEEEEEecCC-CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHh
Q 000521 1215 FQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLR 1293 (1446)
Q Consensus 1215 ~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR 1293 (1446)
..|.++++|++++|+.. ..++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+....|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 45789999999999643 24699999999999999999999999999999999999999999999999999888888888
Q ss_pred cceEEEeCCCCCCCCcHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000521 1294 GRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLK 1370 (1446)
Q Consensus 1294 ~~i~~VpQdp~lF~gTIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr 1370 (1446)
++++|+||+|.+|++|+++|+++... ....++++..++.++.+.++.+ |+++.+.+...+||||||||++||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999985432 2334556666677788888888 89988898889999999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEE
Q 000521 1371 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHL 1429 (1446)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~v 1429 (1446)
+|++|||||||++||.++.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999987778999999999999989999999999975
No 137
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-39 Score=373.04 Aligned_cols=214 Identities=28% Similarity=0.424 Sum_probs=185.0
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.|+++||+.+|++.. +|+|+||+|+.||.++++|||||||||++++|.|+.+|++|+|.|||.|+.++++++ ++|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 589999999997542 999999999999999999999999999999999999999999999999999999976 7899
Q ss_pred EEeCCCCCCCC-cHHHhcCCCCCC---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1298 VVPQSPFLFEG-SLRDNLDPFHMN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1298 ~VpQdp~lF~g-TIR~NLdp~~~~---~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
+|+|+..||+- ||++||.+.-.. +.+++.+..+ +..+.++++..+......||||||||+||||||.++|+
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~-----eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~ 153 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVK-----EVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPK 153 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHH-----HHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCC
Confidence 99999999986 999999875322 3333322211 22233366666777788999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhhh
Q 000521 1374 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYFI 1440 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~~ 1440 (1446)
+++||||.|+||++....+..-|++..+ +.|+|.|||+....+. +|||+||++|+|.+.|+|..+|.
T Consensus 154 v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~ 223 (338)
T COG3839 154 VFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYE 223 (338)
T ss_pred EEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhh
Confidence 9999999999999999988888876543 6899999999887765 89999999999999999998884
No 138
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-40 Score=371.21 Aligned_cols=215 Identities=26% Similarity=0.416 Sum_probs=184.3
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC---CCCceEEEcCeeCCCCChHhHhc
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLRG 1294 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~lR~ 1294 (1446)
.|+++|++++|+. +++|+|+||++++||.+||+|+||||||||+++|.|+++ |++|+|.+||.|+.+.+...+|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 4789999999963 469999999999999999999999999999999999985 68999999999999888888899
Q ss_pred ceEEEeCCCCCCCCcHHHhcCCCCC---C------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000521 1295 RFAVVPQSPFLFEGSLRDNLDPFHM---N------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1365 (1446)
Q Consensus 1295 ~i~~VpQdp~lF~gTIR~NLdp~~~---~------~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1365 (1446)
+++|+||+|.+|+.|+++|+.++.. . .++++.++++.+++.+.+ +....+.+.+||+|||||++||
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv~la 154 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEV-----KDKLKQNALALSGGQQQRLCIA 154 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhh-----hHHhcCCcccCCHHHHHHHHHH
Confidence 9999999999999999999975421 0 112344445554443222 1234556678999999999999
Q ss_pred HHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhh
Q 000521 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||++++|++|+|||||++||.++...+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|.+.+++
T Consensus 155 ral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 229 (246)
T PRK14269 155 RALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFF 229 (246)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999988767899999999999886 48999999999999999887654
No 139
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=6.3e-40 Score=333.53 Aligned_cols=208 Identities=28% Similarity=0.366 Sum_probs=181.5
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChH---hHhcc
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1295 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~~ 1295 (1446)
|+|+||+.+|+.+ +++|+||||+|++||.+-++|+|||||||++++|++...|++|+|.++|.|++++..+ -||++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 7999999999876 7899999999999999999999999999999999999999999999999999887755 48999
Q ss_pred eEEEeCCCCCCCC-cHHHhcCCCC---CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000521 1296 FAVVPQSPFLFEG-SLRDNLDPFH---MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1446)
Q Consensus 1296 i~~VpQdp~lF~g-TIR~NLdp~~---~~~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1446)
||+|.||--|... |+.||+.+-- ..+. +++.++|+.+||.+- ...-...|||||+||+|||||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k---------~~~lP~~LSGGEQQRvaIARA 151 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHK---------ARALPSQLSGGEQQRVAIARA 151 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchh---------hhcCccccCchHHHHHHHHHH
Confidence 9999999988765 9999986431 1222 345567777766544 344466899999999999999
Q ss_pred hccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhhc-CEEEEEeCCEEEEEeccc
Q 000521 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNM-DEILILDHGHLVCISFIC 1436 (1446)
Q Consensus 1368 LLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~-DrIlvl~~G~vvE~~~~~ 1436 (1446)
+..+|++||-||||.|||+++...|.+.+.+.- .|.||++.||+.+.+.++ -|++.+++|+++..+...
T Consensus 152 iV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~g 222 (223)
T COG2884 152 IVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESRG 222 (223)
T ss_pred HccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccccC
Confidence 999999999999999999999999999997764 599999999999999887 679999999999876543
No 140
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-39 Score=374.30 Aligned_cols=213 Identities=28% Similarity=0.421 Sum_probs=184.3
Q ss_pred cEEEEEEEEEecCC-CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1218 LIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
.++++||+++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999643 24699999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEeCCCC--CCCCcHHHhcCCCCC---CCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000521 1297 AVVPQSPF--LFEGSLRDNLDPFHM---NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1446)
Q Consensus 1297 ~~VpQdp~--lF~gTIR~NLdp~~~---~~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1446)
+|+||+|. ++..|+++|+.+... .+. +++.++++.+ |++........+||||||||++||||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~---------gL~~~~~~~~~~LSgGq~qrv~lAra 154 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELV---------GMQDFKEREPARLSGGQKQRVAIAGA 154 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHC---------CCHhHhhCCcccCCHHHHHHHHHHHH
Confidence 99999983 566799999975321 222 2334444444 55544555567899999999999999
Q ss_pred hccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1368 LLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++++|++|||||||++||..+.+.+.+.|++..+ ++|+|+|||+++.+..||||++|++|++++.|.+.+++
T Consensus 155 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 155 VAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred HHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999987643 79999999999999889999999999999999987665
No 141
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=367.15 Aligned_cols=211 Identities=33% Similarity=0.477 Sum_probs=183.4
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+...+...+|++++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999963 36999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEeCCCCCCCCcHHHhcCCCCCCC---hHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1298 VVPQSPFLFEGSLRDNLDPFHMND---DLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1298 ~VpQdp~lF~gTIR~NLdp~~~~~---d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
|+||+|.+|+.|+++|+....... ++++.+ .++.+|++ .........||||||||++||||++++|+
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~---------~l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 151 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEY---------YLSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPE 151 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcHHHHHHH---------HHHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 999999999999999997532211 222333 33344664 23455667899999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1374 VLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+|||||||++||.++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 152 llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (241)
T PRK14250 152 VLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHh
Confidence 999999999999999999999998753 37999999999999875 8999999999999999887654
No 142
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-37 Score=339.62 Aligned_cols=473 Identities=19% Similarity=0.251 Sum_probs=325.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCChhHHHHHHHchhhhhccchHHHHHHH
Q 000521 937 YLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNIL 1016 (1446)
Q Consensus 937 ~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lh~~ll~~vl~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~ 1016 (1446)
++..|.++..+..+...+.......++.+.-.+++.++.++++.+|+.-+++...++++.++++|+..|.-.. ..+..+
T Consensus 50 ~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~-s~lp~~ 128 (546)
T COG4615 50 VLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAF-SRLPEL 128 (546)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehH-hhhHHH
Confidence 3333444444444455555667778899999999999999999999999999999999999999999998322 233445
Q ss_pred HHHHHHHHHhhhhHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhcchHHHhhcCcHH--
Q 000521 1017 LANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSED-- 1094 (1446)
Q Consensus 1017 ~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~-- 1094 (1446)
.+.....+++...+++.+|.+..+.+..+++..+.+...++..-+--+...+....++.+++..++|.+..+...-..
T Consensus 129 ~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~ 208 (546)
T COG4615 129 VQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEY 208 (546)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHH
Confidence 566666778888888888876555444443333322221111111111122334567889999999999988775433
Q ss_pred HHHHHHHHHHHHHHH----HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcCcccHHHHHHHHHHHHHHHH
Q 000521 1095 YFMAKFKEHVVLYQR----TSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVS 1170 (1446)
Q Consensus 1095 ~~~~~~~~~~d~~~~----~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~ 1170 (1446)
.+.+.+...-+...+ ..........|.++.+-.+ +..+..++... .. . +...........+.+-+
T Consensus 209 ~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~l----IGlvf~lal~~---~w--~--st~~a~tivlvlLflr~ 277 (546)
T COG4615 209 VHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGL----IGLVFWLALSL---GW--A--STNVAATIVLVLLFLRT 277 (546)
T ss_pred HHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHH----HHHHHHHHHhh---cc--c--hhhHHHHHHHHHHHHhh
Confidence 333333221111111 1111112334443322111 11111111110 00 0 11111111122233456
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhcCCccccccCCCCCCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEE
Q 000521 1171 LLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVG 1250 (1446)
Q Consensus 1171 ~l~~~i~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~Gekvg 1250 (1446)
++.+++..+..+-++.+|..|+.++...|+.+.-....+.|+|. .||++||.|+|.+.. --+.-||++|+.||.|-
T Consensus 278 pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~~~~q~~p~~~---~lelrnvrfay~~~~-FhvgPiNl~ikrGelvF 353 (546)
T COG4615 278 PLLSAVGILPTLLTAQVAFNKIAKLELAPYKADFPRPQAFPDWK---TLELRNVRFAYQDNA-FHVGPINLTIKRGELVF 353 (546)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccCCCCCcCCccc---ceeeeeeeeccCccc-ceecceeeEEecCcEEE
Confidence 78888888999999999999999987644332222222334464 599999999997653 45788999999999999
Q ss_pred EECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHH
Q 000521 1251 IVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLE 1330 (1446)
Q Consensus 1251 IvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~ 1330 (1446)
|+|.+||||||++++|.|+|.|++|+|++||.+++.-+++++|+-++-|.-|-+||+.++ .|.+..+.+.+..-|+
T Consensus 354 liG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll----~~e~~as~q~i~~~Lq 429 (546)
T COG4615 354 LIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL----GPEGKASPQLIEKWLQ 429 (546)
T ss_pred EECCCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh----CCccCCChHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999998764 3334456666766666
Q ss_pred HccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEe
Q 000521 1331 KCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITI 1408 (1446)
Q Consensus 1331 ~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~I 1408 (1446)
+..+.....-. |-... ...||-|||.|+++--|++-+.+|+++||=-+--|+.=.+...+.+-... .||||+.|
T Consensus 430 rLel~~ktsl~--d~~fs--~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aI 505 (546)
T COG4615 430 RLELAHKTSLN--DGRFS--NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAI 505 (546)
T ss_pred HHHHhhhhccc--CCccc--ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEE
Confidence 65554322111 11111 12599999999999999999999999999999999999988877664332 59999999
Q ss_pred ccCchhHhhcCEEEEEeCCEEEEEe
Q 000521 1409 AHRISTVLNMDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1409 aHrl~ti~~~DrIlvl~~G~vvE~~ 1433 (1446)
||+-.....+||++.|++|+++|.-
T Consensus 506 sHDd~YF~~ADrll~~~~G~~~e~t 530 (546)
T COG4615 506 SHDDHYFIHADRLLEMRNGQLSELT 530 (546)
T ss_pred ecCchhhhhHHHHHHHhcCceeecc
Confidence 9999999999999999999999863
No 143
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-39 Score=375.49 Aligned_cols=216 Identities=30% Similarity=0.461 Sum_probs=181.6
Q ss_pred EEEEEEEEEecCCC---CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCC--hHhHh
Q 000521 1219 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--VRDLR 1293 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~--~~~lR 1293 (1446)
|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 79999999996432 36999999999999999999999999999999999999999999999999998754 45788
Q ss_pred cceEEEeCCC--CCCCCcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCc--hhhhcCCCCCChhHHHHHHHHH
Q 000521 1294 GRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLE--TFVKESGISFSVGQRQLICLAR 1366 (1446)
Q Consensus 1294 ~~i~~VpQdp--~lF~gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLd--t~v~e~G~~LSgGQrQrl~LAR 1366 (1446)
++++|+||+| .+|+.|+++|+.+.. ..++++..+. ..+.++.+|++ +........||||||||++|||
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAr 157 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENR-----VKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAG 157 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHH
Confidence 9999999998 578899999997532 1233322211 12223333554 4455666789999999999999
Q ss_pred HhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhh
Q 000521 1367 ALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1367 ALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||+.+|++|||||||++||+.+.+.+.+.|++..+ +.|||+|||+++.+. .||||++|++|++++.|.+..++
T Consensus 158 aL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 158 VVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999987643 789999999999985 59999999999999999887664
No 144
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-39 Score=383.09 Aligned_cols=216 Identities=27% Similarity=0.426 Sum_probs=183.6
Q ss_pred EEEEEEEEEecC--CCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHh---Hh
Q 000521 1219 IEFQNVTMRYKP--SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1293 (1446)
Q Consensus 1219 I~f~nVs~~Y~~--~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR 1293 (1446)
|+++||+++|+. ...++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999972 2347999999999999999999999999999999999999999999999999999887654 47
Q ss_pred cceEEEeCCCCCCC-CcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000521 1294 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1446)
Q Consensus 1294 ~~i~~VpQdp~lF~-gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1369 (1446)
++++||||++.+|+ .|+++|+.... ..++++..+ .+.+.++.+|++........+||||||||++|||||+
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~ 156 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELVGLSDKADRYPAQLSGGQKQRVAIARALA 156 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHH
Confidence 89999999999987 69999996431 122222211 1234444556766666667789999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1370 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++|+||+|||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 157 ~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 157 SNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVF 229 (343)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999987643 7899999999999876 9999999999999999876554
No 145
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.5e-39 Score=363.55 Aligned_cols=213 Identities=26% Similarity=0.383 Sum_probs=178.2
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|+++||+++|+....++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.... ..+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEEE
Confidence 5789999999643246999999999999999999999999999999999999999999999999987643 667889999
Q ss_pred EeCCCCCC-CCcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1299 VPQSPFLF-EGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1299 VpQdp~lF-~gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+||+|.+| ..|+++|+.... ..+.++..+ ...+.++.+|++........+||+|||||++||||++++|++
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 154 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKE-----EVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSV 154 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999998 579999986431 112111111 122333334555444555568999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccch
Q 000521 1375 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|.+..
T Consensus 155 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 218 (220)
T cd03263 155 LLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQE 218 (220)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHH
Confidence 9999999999999999999999987777999999999999875 89999999999999988753
No 146
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-39 Score=362.14 Aligned_cols=212 Identities=26% Similarity=0.394 Sum_probs=179.3
Q ss_pred cEEEEEEEEEecCCC--CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHh---H
Q 000521 1218 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---L 1292 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---l 1292 (1446)
.++++||+++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997432 46999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cceEEEeCCCCCCCC-cHHHhcCCC---CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000521 1293 R-GRFAVVPQSPFLFEG-SLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1446)
Q Consensus 1293 R-~~i~~VpQdp~lF~g-TIR~NLdp~---~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1446)
| ++++|+||+|.+|++ |+++|+.+. .....++..+ .+.+.++.+|++........+||||||||++||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~la~a 159 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS-----RALEMLAAVGLEHRANHRPSELSGGERQRVAIARA 159 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHH
Confidence 3 679999999999876 999998642 1122221111 12334444567666666677899999999999999
Q ss_pred hccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhhcCEEEEEeCCEEEEEec
Q 000521 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVCISF 1434 (1446)
Q Consensus 1368 LLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~ 1434 (1446)
++++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+..+|++++|++|++++.+.
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 160 LVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999998763 4799999999999999999999999999998664
No 147
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-39 Score=374.65 Aligned_cols=217 Identities=26% Similarity=0.394 Sum_probs=184.3
Q ss_pred cEEEEEEEEEecCCC---CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCC----ChH
Q 000521 1218 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~ 1290 (1446)
.|+++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 379999999996432 3699999999999999999999999999999999999999999999999999754 346
Q ss_pred hHhcceEEEeCCC--CCCCCcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHH
Q 000521 1291 DLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICL 1364 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp--~lF~gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~L 1364 (1446)
.+|++|+|+||+| .+|+.|+++|+.+.. ..+.++..+. ..+.++.+||++ ..+....+||||||||++|
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~l 156 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAI 156 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHcCCChhhhhCCcccCCHHHHHHHHH
Confidence 7899999999998 588889999996532 1232222221 234455558874 4566778999999999999
Q ss_pred HHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhh
Q 000521 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1365 ARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+. .||||++|++|++++.|.+..++
T Consensus 157 araL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 157 VSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred HHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999998763 4899999999999985 58999999999999999988765
No 148
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-39 Score=369.60 Aligned_cols=216 Identities=26% Similarity=0.369 Sum_probs=183.5
Q ss_pred CccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCceEEEcCeeCCC--CC
Q 000521 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TP 1288 (1446)
Q Consensus 1216 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~ 1288 (1446)
.+.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 567999999999964 369999999999999999999999999999999999986 479999999999863 45
Q ss_pred hHhHhcceEEEeCCCCCCCCcHHHhcCCCC----CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000521 1289 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1360 (1446)
Q Consensus 1289 ~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~----~~~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQ 1360 (1446)
...+|++++|+||+|.+|+.|+++|+.+.. ..+. ++++++++.+++.+. ++...++...+|||||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~Gq~q 163 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNE-----VKDKLHQSGYSLSGGQQQ 163 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChh-----hHHHHhcCCCCCCHHHHH
Confidence 667899999999999999999999997531 1222 234455555544221 123456667789999999
Q ss_pred HHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1361 rl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
|++||||++++|+||||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|.+..+
T Consensus 164 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 242 (260)
T PRK10744 164 RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTI 242 (260)
T ss_pred HHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999987667899999999999865 899999999999999876654
No 149
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.1e-39 Score=361.20 Aligned_cols=202 Identities=29% Similarity=0.395 Sum_probs=171.4
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChH---hHhcc
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1295 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~~ 1295 (1446)
++++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999964434699999999999999999999999999999999999999999999999999876543 47889
Q ss_pred eEEEeCCCCCCC-CcHHHhcCCCC---CC----ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000521 1296 FAVVPQSPFLFE-GSLRDNLDPFH---MN----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1446)
Q Consensus 1296 i~~VpQdp~lF~-gTIR~NLdp~~---~~----~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1446)
++|+||+|.+|. .|+++|+.... .. .++++.++++.+ |++........+||||||||++||||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LSgG~~qrv~lara 152 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKV---------GLEGKAHALPMQLSGGEQQRVAIARA 152 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc---------CChhhhhCChhhCCHHHHHHHHHHHH
Confidence 999999999887 59999996421 11 122344444444 44444444556899999999999999
Q ss_pred hccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEE
Q 000521 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1429 (1446)
Q Consensus 1368 LLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~v 1429 (1446)
|+++|++|+|||||++||.++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 153 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 153 IVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999998763 47899999999999875 899999999985
No 150
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-40 Score=347.09 Aligned_cols=203 Identities=25% Similarity=0.376 Sum_probs=172.9
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
|+++|+++.|.. ..+++|+||+|++||+++++|||||||||+|++|.++++|++|+|.++|
T Consensus 2 I~~~nvsk~y~~------~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr 75 (309)
T COG1125 2 IEFENVSKRYGN------KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRR 75 (309)
T ss_pred ceeeeeehhcCC------ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHH
Confidence 678999999862 3359999999999999999999999999999999999999999999987
Q ss_pred eEEEEcCCCCCCCc-cHHHHHhcCC---CCChh----hHHHHHHHhcchH-HHhhccCCCcccccCCCCccchHHHHHHH
Q 000521 669 SIAYVPQVPWILSG-TIRDNILFGK---NYDPQ----SYSETLKACTLDV-DISLMVGGDMAYIGEKGVNLSGGQRARLA 739 (1446)
Q Consensus 669 ~i~yv~Q~p~l~~~-ti~~nI~~g~---~~~~~----~~~~v~~~~~l~~-di~~~~~gd~t~ig~~g~~LSGGQkqRi~ 739 (1446)
+||||-|+.-||+. ||.|||..-. .++++ +.++.++..+|+. +. .......|||||+|||.
T Consensus 76 ~IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~----------~~RyP~eLSGGQQQRVG 145 (309)
T COG1125 76 KIGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEY----------ADRYPHELSGGQQQRVG 145 (309)
T ss_pred hhhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHH----------hhcCchhcCcchhhHHH
Confidence 59999999999865 9999998642 35554 4556667777764 22 23456789999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcch-hhhCCEEEEEeCCEEEEecChhHHHh
Q 000521 740 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 740 lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~-l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
+||||..+|+|+|+||||+||||-+++++-+....-...-++|+|+|||++++ ++-||||.+|++|+|+..++|+++..
T Consensus 146 v~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 146 VARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred HHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHh
Confidence 99999999999999999999999999988776432223347899999999987 56699999999999999999999986
Q ss_pred cc
Q 000521 819 SL 820 (1446)
Q Consensus 819 ~~ 820 (1446)
+.
T Consensus 226 ~P 227 (309)
T COG1125 226 NP 227 (309)
T ss_pred Cc
Confidence 53
No 151
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=2.3e-39 Score=366.08 Aligned_cols=218 Identities=26% Similarity=0.405 Sum_probs=182.8
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhH-hcceE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1297 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1297 (1446)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 478999999963 469999999999999999999999999999999999999999999999999988876654 57799
Q ss_pred EEeCCCCCCCC-cHHHhcCCCCCC-ChHHH-------HHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000521 1298 VVPQSPFLFEG-SLRDNLDPFHMN-DDLKI-------WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1446)
Q Consensus 1298 ~VpQdp~lF~g-TIR~NLdp~~~~-~d~ei-------~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1368 (1446)
|+||+|.+|++ |+++|+...... ....+ ...-......+.++.+|++...+.....||||||||++||||+
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 158 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQRRLEIARAL 158 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHHHHHH
Confidence 99999999987 999998643211 00000 0000111234455556777777777778999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
+++|++|+|||||++||..+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|.+..+
T Consensus 159 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 159 ATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEV 230 (236)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHh
Confidence 99999999999999999999999999998764 58999999999999876 899999999999999988754
No 152
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.6e-39 Score=362.81 Aligned_cols=206 Identities=29% Similarity=0.390 Sum_probs=174.6
Q ss_pred EEEEEEEEEecCCC--CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHh----H
Q 000521 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD----L 1292 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~----l 1292 (1446)
++++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999996421 46999999999999999999999999999999999999999999999999998876433 4
Q ss_pred hcceEEEeCCCCCCCC-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000521 1293 RGRFAVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1446)
Q Consensus 1293 R~~i~~VpQdp~lF~g-TIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1368 (1446)
|++++|+||+|.+|.+ |+++|+..... ....+. ...+.+.++.+|++........+||||||||++||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al 155 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARAL 155 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHH
Confidence 6789999999999987 99999975321 111111 11233445555777666667778999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhhcCEEEEEeCCEE
Q 000521 1369 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHL 1429 (1446)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~v 1429 (1446)
+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|++
T Consensus 156 ~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 156 ANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred ccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999987643 7999999999999888999999999974
No 153
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.6e-39 Score=362.28 Aligned_cols=213 Identities=25% Similarity=0.392 Sum_probs=179.0
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhH-hcceE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1297 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1297 (1446)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGK--SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCC--eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 579999999964 369999999999999999999999999999999999999999999999999988877654 67899
Q ss_pred EEeCCCCCCCC-cHHHhcCCCCCCC-hHHHHHHHHHccHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1298 VVPQSPFLFEG-SLRDNLDPFHMND-DLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1298 ~VpQdp~lF~g-TIR~NLdp~~~~~-d~ei~~aL~~~~L~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
|+||++.+|++ |+++|+.+..... +.+..+. +.+.++.+ +++.........||+|||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 153 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKAR-----LERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKL 153 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHHH-----HHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999987 9999996542211 1111111 12223333 355555566678999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1375 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
|+|||||++||.++.+.+.+.|++.. +++|+|++||+++.+.+ ||+|++|++|++++.|.+..+
T Consensus 154 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (222)
T cd03224 154 LLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAEL 219 (222)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHH
Confidence 99999999999999999999998764 57899999999998765 899999999999999877654
No 154
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-39 Score=360.47 Aligned_cols=206 Identities=29% Similarity=0.438 Sum_probs=173.1
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+. .|++++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEEE
Confidence 478999999964 469999999999999999999999999999999999999999999999999986543 5778999
Q ss_pred EeCCCCCCC-CcHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1299 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1299 VpQdp~lF~-gTIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+||+|.+|. .|+++|+..... .+.++..+ ...+.++.+|++........+||||||||++|||||+++|++
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~ 151 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRA-----RVRELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSL 151 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999886 599999964311 11111111 122334444666656666678999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEe
Q 000521 1375 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~ 1433 (1446)
|||||||++||.++.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|++|++++.|
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 152 LLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999998764 37899999999998765 8999999999998865
No 155
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4e-39 Score=340.87 Aligned_cols=218 Identities=26% Similarity=0.408 Sum_probs=185.7
Q ss_pred CccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChH---hH
Q 000521 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DL 1292 (1446)
Q Consensus 1216 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~l 1292 (1446)
+-.|++++|+++|.+ ..||+||||+|++||.+||+|+||||||||++++.|+..|++|+|.|+|.|+.+++.+ .+
T Consensus 6 ~~~I~vr~v~~~fG~--~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 6 EPLIEVRGVTKSFGD--RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred cceEEEeeeeeecCC--EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 346999999999964 4799999999999999999999999999999999999999999999999999988865 56
Q ss_pred hcceEEEeCCCCCCCC-cHHHhcCC-CCCC---ChHHHHHHHHHccHHHHHHhCCCchh-hhcCCCCCChhHHHHHHHHH
Q 000521 1293 RGRFAVVPQSPFLFEG-SLRDNLDP-FHMN---DDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLICLAR 1366 (1446)
Q Consensus 1293 R~~i~~VpQdp~lF~g-TIR~NLdp-~~~~---~d~ei~~aL~~~~L~~~i~~lgLdt~-v~e~G~~LSgGQrQrl~LAR 1366 (1446)
|+++|++.|+..||+. ||+||+.+ ..++ +++++.+. ... .++..||... ..--.+.||||.+.|.+|||
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~l-v~~----KL~~VGL~~~~~~~~PsELSGGM~KRvaLAR 158 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIREL-VLM----KLELVGLRGAAADLYPSELSGGMRKRVALAR 158 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHH-HHH----HHHhcCCChhhhhhCchhhcchHHHHHHHHH
Confidence 9999999999999987 99999974 3333 44444331 111 1222277766 33456789999999999999
Q ss_pred HhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhhh
Q 000521 1367 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYFI 1440 (1446)
Q Consensus 1367 ALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~~ 1440 (1446)
|+.-+|+|+++|||||+||+-+...+-+.|++.. -+.|+|+|||+++++.. ||||+++.+|+|+-.|+|+.+..
T Consensus 159 AialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 159 AIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLA 235 (263)
T ss_pred HHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHh
Confidence 9999999999999999999999999988887654 38999999999999876 69999999999999999987653
No 156
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.4e-39 Score=354.60 Aligned_cols=197 Identities=30% Similarity=0.473 Sum_probs=178.9
Q ss_pred EEEEEEEEEecCCC---CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcc
Q 000521 1219 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1295 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1295 (1446)
++++||+++|++.. +++|+|+||+|++||+++|+|++|||||||+++|.|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57999999997542 3699999999999999999999999999999999999999999999999 6
Q ss_pred eEEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1296 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1296 i~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
++|+||+|.+|++|+++|+.+....++++.+++++.+++.+.+..+ |+++.+++.+.+||+|||||++||||++++|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999876555666778888898998888877 89999998889999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHH-HHHHhc-CCcEEEEeccCchhHhhcCEEEEEeCCE
Q 000521 1374 VLCLDECTANVDAQTASILQN-AISSEC-KGMTVITIAHRISTVLNMDEILILDHGH 1428 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~-~I~~~~-~~~TvI~IaHrl~ti~~~DrIlvl~~G~ 1428 (1446)
+++|||||++||.++.+.+.+ .+++.. +++|||++||+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999877765 566553 4689999999999999999999999985
No 157
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-39 Score=372.48 Aligned_cols=217 Identities=28% Similarity=0.420 Sum_probs=182.1
Q ss_pred EEEEEEEEEecCCC---CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCC----CChHh
Q 000521 1219 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----TPVRD 1291 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~----i~~~~ 1291 (1446)
|+++||+++|++.. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997432 259999999999999999999999999999999999999999999999999963 34567
Q ss_pred HhcceEEEeCCC--CCCCCcHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHH
Q 000521 1292 LRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLA 1365 (1446)
Q Consensus 1292 lR~~i~~VpQdp--~lF~gTIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LA 1365 (1446)
+|++++||+|+| .+|+.|+.+|+.+... .+.+++.+ ...+.++.+|++ ........+||||||||++||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA 156 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK-----IAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIA 156 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCCChhhccCCcccCCHHHHHHHHHH
Confidence 899999999998 7899999999975321 22222211 112333334664 234566678999999999999
Q ss_pred HHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhhh
Q 000521 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYFI 1440 (1446)
Q Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~~ 1440 (1446)
|||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .||||++|++|++++.|.|..+|.
T Consensus 157 ~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 233 (288)
T PRK13643 157 GILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQ 233 (288)
T ss_pred HHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 99999999999999999999999999999998754 4889999999999885 599999999999999999988763
No 158
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-39 Score=363.22 Aligned_cols=212 Identities=27% Similarity=0.367 Sum_probs=178.5
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 3 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 78 (239)
T cd03296 3 IEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGF 78 (239)
T ss_pred EEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEE
Confidence 789999999964 469999999999999999999999999999999999999999999999999876653 3678999
Q ss_pred EeCCCCCCC-CcHHHhcCCCCCC-------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000521 1299 VPQSPFLFE-GSLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1446)
Q Consensus 1299 VpQdp~lF~-gTIR~NLdp~~~~-------~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1370 (1446)
+||+|.+|+ .|+++|+.+.... +..+.. ..+.+.++.+|++........+||+|||||++|||||++
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~ 153 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIR-----AKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARALAV 153 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHH-----HHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhc
Confidence 999999986 5999999753211 111111 112333444466655666667899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1371 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+|++|||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|.+.+++
T Consensus 154 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (239)
T cd03296 154 EPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVY 225 (239)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHh
Confidence 9999999999999999999999999987643 7899999999998765 8999999999999999887653
No 159
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.2e-39 Score=360.44 Aligned_cols=209 Identities=27% Similarity=0.429 Sum_probs=175.3
Q ss_pred EEEEEEEEEecCCC--CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...++|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 68999999996432 269999999999999999999999999999999999999999999999999976 346778999
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
+|+||+|.+|++ |+++|+.... ..+.++..+ ...+.++.+|++........+||||||||++||||++++|
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA-----RLEELADRLGMEELLDRRVGGFSTGMRQKVAIARALVHDP 155 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCC
Confidence 999999999986 9999985321 112111111 1123334446655566667789999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEe
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~ 1433 (1446)
++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++++.|
T Consensus 156 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 156 PVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999998764 47999999999998875 8999999999998864
No 160
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-39 Score=365.67 Aligned_cols=213 Identities=28% Similarity=0.388 Sum_probs=180.6
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCC---hHhHhcc
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDLRGR 1295 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---~~~lR~~ 1295 (1446)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999642 46999999999999999999999999999999999999999999999999998876 5667889
Q ss_pred eEEEeCCCCCCC-CcHHHhcCCCCC------------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1296 FAVVPQSPFLFE-GSLRDNLDPFHM------------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1296 i~~VpQdp~lF~-gTIR~NLdp~~~------------~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
++|+||++.+|. .|+++|+..... .+++. .....+.++.+|++.........||||||||+
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv 153 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEE------KQRALAALERVGLLDKAYQRADQLSGGQQQRV 153 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHH------HHHHHHHHHHcCChhhhCCCcccCCHHHHHHH
Confidence 999999999887 699999964211 11111 11122334444666556667778999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
+||||++++|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+. .||+|++|++|++++.|.+..+
T Consensus 154 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (241)
T cd03256 154 AIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAEL 232 (241)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHh
Confidence 99999999999999999999999999999999998764 3799999999999998 5899999999999999988754
No 161
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-39 Score=340.89 Aligned_cols=211 Identities=28% Similarity=0.424 Sum_probs=183.6
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCC---hHhHhc
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDLRG 1294 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---~~~lR~ 1294 (1446)
.|+++||+.+|+ +...+|+||||+|++||.|+|+|+||||||||+++|.|+.+|++|+|.++|.++...+ ++.+|+
T Consensus 3 ~i~~~nl~k~yp-~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYP-GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecC-CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 489999999997 4568999999999999999999999999999999999999999999999999998888 667788
Q ss_pred ceEEEeCCCCCCCC-cHHHhcCC------------CCCCChH---HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhH
Q 000521 1295 RFAVVPQSPFLFEG-SLRDNLDP------------FHMNDDL---KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQ 1358 (1446)
Q Consensus 1295 ~i~~VpQdp~lF~g-TIR~NLdp------------~~~~~d~---ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQ 1358 (1446)
++|+|.|++-|-+- |+-+|+.. ++-++.+ ...++|+++|+.+. .-.+..+|||||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~---------A~qra~~LSGGQ 152 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDK---------AYQRASTLSGGQ 152 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHH---------HHHHhccCCcch
Confidence 99999999998875 89999742 2334433 34566666666554 234455899999
Q ss_pred HHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEecc
Q 000521 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFI 1435 (1446)
Q Consensus 1359 rQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~ 1435 (1446)
+||++|||||.++|+|++=|||+|+||+++.+.|++.|++.. .|.|||+.-|.++..++ ||||+=|++|+|+-.|.+
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~ 232 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPA 232 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCCh
Confidence 999999999999999999999999999999999999998764 58999999999999876 799999999999998888
Q ss_pred chh
Q 000521 1436 CRY 1438 (1446)
Q Consensus 1436 ~~~ 1438 (1446)
..+
T Consensus 233 ~el 235 (258)
T COG3638 233 SEL 235 (258)
T ss_pred hhh
Confidence 653
No 162
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4.2e-39 Score=360.22 Aligned_cols=207 Identities=25% Similarity=0.384 Sum_probs=174.9
Q ss_pred EEEEEEEEEecCCC--CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHh---Hh
Q 000521 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1293 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR 1293 (1446)
++++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996422 46999999999999999999999999999999999999999999999999998887654 34
Q ss_pred -cceEEEeCCCCCCC-CcHHHhcCCC---CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000521 1294 -GRFAVVPQSPFLFE-GSLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1446)
Q Consensus 1294 -~~i~~VpQdp~lF~-gTIR~NLdp~---~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1368 (1446)
++++|+||+|.+|+ .|+++|+... ...+..+.. + ...+.++.+|++.........||||||||++||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~---~--~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral 156 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAK---E--RAYEMLEKVGLEHRINHRPSELSGGERQRVAIARAL 156 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHH---H--HHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 68999999999986 5999999652 111111111 1 123344455777666666678999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhhcCEEEEEeCCEEE
Q 000521 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLV 1430 (1446)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~~G~vv 1430 (1446)
+++|+||||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+..+|+|++|++|+++
T Consensus 157 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 157 VNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred hCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999998764 378999999999999889999999999986
No 163
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=4e-39 Score=347.47 Aligned_cols=178 Identities=32% Similarity=0.548 Sum_probs=166.2
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|+++|++++|+...+++++|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 579999999975434699999999999999999999999999999999999999999999999998776 6678899999
Q ss_pred EeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000521 1299 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1378 (1446)
Q Consensus 1299 VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1378 (1446)
+||+|.+|+.|+++|+ ..+||+|||||++||||++++|++|+||
T Consensus 80 ~~q~~~~~~~tv~~~i------------------------------------~~~LS~G~~qrv~laral~~~p~~lllD 123 (178)
T cd03247 80 LNQRPYLFDTTLRNNL------------------------------------GRRFSGGERQRLALARILLQDAPIVLLD 123 (178)
T ss_pred EccCCeeecccHHHhh------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999997 3479999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEe
Q 000521 1379 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1379 EaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~ 1433 (1446)
|||++||.++.+.+.+.|++..+++|+|+++|+++.+..||++++|++|++++.|
T Consensus 124 EP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 124 EPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999998877789999999999999999999999999998864
No 164
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-39 Score=369.13 Aligned_cols=209 Identities=23% Similarity=0.369 Sum_probs=180.6
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.|+++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999632 46999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEeCCC--CCCCCcHHHhcCCCCC---CCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000521 1298 VVPQSP--FLFEGSLRDNLDPFHM---NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1446)
Q Consensus 1298 ~VpQdp--~lF~gTIR~NLdp~~~---~~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1368 (1446)
|+||+| .+|..|+++|+.+... .+. +++.++++.++ +..........||||||||++|||||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~---------L~~~~~~~~~~LSgG~~qrv~laraL 153 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVR---------MWDFRDKPPYHLSYGQKKRVAIAGVL 153 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCC---------CHHHhcCChhhCCHHHHHHHHHHHHH
Confidence 999998 5788999999975321 121 23344444444 44334444557999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccc
Q 000521 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVCISFIC 1436 (1446)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~ 1436 (1446)
+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+. .||||++|++|++++.|.+.
T Consensus 154 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 223 (274)
T PRK13647 154 AMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKS 223 (274)
T ss_pred HcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999998764 4799999999999985 59999999999999999875
No 165
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-39 Score=367.70 Aligned_cols=220 Identities=25% Similarity=0.382 Sum_probs=186.0
Q ss_pred CCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCceEEEcCeeCCC--
Q 000521 1214 PFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN-- 1286 (1446)
Q Consensus 1214 p~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~-- 1286 (1446)
|....|+++||+++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++..
T Consensus 9 ~~~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~ 86 (269)
T PRK14259 9 SKNIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPR 86 (269)
T ss_pred CCCceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 34457999999999964 369999999999999999999999999999999999987 589999999999863
Q ss_pred CChHhHhcceEEEeCCCCCCCCcHHHhcCCCCC---CC---hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000521 1287 TPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1360 (1446)
Q Consensus 1287 i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~---~~---d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQ 1360 (1446)
.+..++|++++|+||+|.+|+.|+++|+.+... .. ++++.++++.++++. +++........+||+||||
T Consensus 87 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 87 VDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWD-----ECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred CCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcc-----hhhhhhCCCcccCCHHHHH
Confidence 566788999999999999999999999975422 11 234455566555432 2233445556689999999
Q ss_pred HHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeC-----------CE
Q 000521 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-----------GH 1428 (1446)
Q Consensus 1361 rl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~-----------G~ 1428 (1446)
|++||||++++|++|||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.+ ||+|++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999987668899999999998865 899999996 67
Q ss_pred EEEEeccchhhh
Q 000521 1429 LVCISFICRYFI 1440 (1446)
Q Consensus 1429 vvE~~~~~~~~~ 1440 (1446)
++|.|.+..++.
T Consensus 242 ~~~~~~~~~~~~ 253 (269)
T PRK14259 242 LVEFNETKKIFN 253 (269)
T ss_pred EEEeCCHHHHHh
Confidence 999999887753
No 166
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-39 Score=365.18 Aligned_cols=214 Identities=29% Similarity=0.410 Sum_probs=182.3
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999753 469999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EeCCCCCCC-CcHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCch--hhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1299 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLET--FVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1299 VpQdp~lF~-gTIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt--~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
+||+|.+|+ .|+++|+..... .+.++. .....+.++.+|++. .......+||+|||||++||||++++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p 154 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADP 154 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999986 699999964321 111111 112334455556664 556667789999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
++|+|||||++||.++.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|.+.++
T Consensus 155 ~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 223 (242)
T cd03295 155 PLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEI 223 (242)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999998764 37999999999998764 899999999999999887654
No 167
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-39 Score=367.65 Aligned_cols=216 Identities=24% Similarity=0.415 Sum_probs=184.4
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++|++++|+++..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 58999999999644457999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEeCCC--CCCCCcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1298 VVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1298 ~VpQdp--~lF~gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
|+||+| .++..|+++|+.+.. ..++++..+ .+.+.++.+|++........+||+|||||++|||||+++|
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKVGMEDYLDKEPQNLSGGQKQRVAIASVLALNP 161 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 999998 455679999997531 123232221 1223344446666666677799999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchh
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
++|||||||++||..+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|.+..+
T Consensus 162 ~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 229 (271)
T PRK13632 162 EIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEI 229 (271)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999987643 4899999999999888999999999999998877654
No 168
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=7.1e-39 Score=363.76 Aligned_cols=213 Identities=29% Similarity=0.378 Sum_probs=179.5
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh---HhHhcc
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1295 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1295 (1446)
|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 2 l~~~~l~~~~~~-~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPN-GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCC-CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 689999999962 2469999999999999999999999999999999999999999999999999987654 346889
Q ss_pred eEEEeCCCCCCC-CcHHHhcCCCCC------------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1296 FAVVPQSPFLFE-GSLRDNLDPFHM------------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1296 i~~VpQdp~lF~-gTIR~NLdp~~~------------~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
++|+||++.+|. .|+++|+..... ..+++ .....+.++.+|++........+||||||||+
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv 154 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEED------KERALSALERVGLADKAYQRADQLSGGQQQRV 154 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHH------HHHHHHHHHHcCcHhhhcCCcccCCHHHHHHH
Confidence 999999999887 599999964211 01110 11123334444666556667778999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
+||||++++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|++++.|++..+
T Consensus 155 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 155 AIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 99999999999999999999999999999999998764 37899999999999865 899999999999999988754
No 169
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-38 Score=368.32 Aligned_cols=213 Identities=24% Similarity=0.409 Sum_probs=183.9
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++||+++|+...+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999654456999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEeCCC--CCCCCcHHHhcCCCCC---CChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000521 1298 VVPQSP--FLFEGSLRDNLDPFHM---NDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1446)
Q Consensus 1298 ~VpQdp--~lF~gTIR~NLdp~~~---~~d~----ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1368 (1446)
|+||+| .+++.|+++|+.+... .+.+ ++.++++.+ ||+..+......||||||||++||||+
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~---------gL~~~~~~~~~~LS~G~~qrv~laral 155 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQV---------GMEDFLNREPHRLSGGQKQRVAIAGVL 155 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHc---------CChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 999998 4667899999975321 1222 233333333 555555555668999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1369 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|.+..++
T Consensus 156 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13635 156 ALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIF 228 (279)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999987653 78999999999999999999999999999999876543
No 170
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-39 Score=366.47 Aligned_cols=215 Identities=27% Similarity=0.389 Sum_probs=182.5
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCCC--CChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~~ 1290 (1446)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 7 IIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred eEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 6999999999964 4699999999999999999999999999999999999997 48999999999864 3456
Q ss_pred hHhcceEEEeCCCCCCCCcHHHhcCCCCC----CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~gTIR~NLdp~~~----~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
.+|++++|+||+|.+|+.|+++|+.+... .+ ++++.++++.+++.+.+ +........+||||||||+
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LSgG~~qrv 159 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV-----KDKLNTNALSLSGGQQQRL 159 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh-----HHHHhCCcccCCHHHHHHH
Confidence 77899999999999999999999965321 11 23445556665553222 1223445668999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++++|++|||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.+ ||||++|++|++++.|.+..++
T Consensus 160 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 160 CIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999988668999999999999865 8999999999999999987664
No 171
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7e-39 Score=345.40 Aligned_cols=196 Identities=28% Similarity=0.377 Sum_probs=167.6
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.+++++|+.+|.. ..||+|+||+|++||.|+|+||||||||||++++.|+.+|++|+|.+||.++..- ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 4899999999975 5799999999999999999999999999999999999999999999999988433 46799
Q ss_pred EEeCCCCCCCC-cHHHhcCCCCCC---C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000521 1298 VVPQSPFLFEG-SLRDNLDPFHMN---D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1446)
Q Consensus 1298 ~VpQdp~lF~g-TIR~NLdp~~~~---~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1369 (1446)
||+|++.||+- ||++|+.+.-+. + .+...+.|+.+||. ..-+.....||||||||++|||||+
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~---------~~~~~~P~qLSGGMrQRVaiARAL~ 146 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLA---------GFEDKYPHQLSGGMRQRVAIARALA 146 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCc---------chhhcCccccChHHHHHHHHHHHHh
Confidence 99999999997 999998654322 1 22344555555554 4445567789999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHh-hcCEEEEEeC--CEE
Q 000521 1370 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDH--GHL 1429 (1446)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlvl~~--G~v 1429 (1446)
.+|+||+||||.++||+.|...+|+-+.+.. .++||++|||+++... -+|||+||.+ |+|
T Consensus 147 ~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 147 TRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred cCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999999887754 3699999999999765 5899999999 544
No 172
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=368.95 Aligned_cols=216 Identities=26% Similarity=0.394 Sum_probs=182.7
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCC--CCChHhHhcc
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII--NTPVRDLRGR 1295 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~--~i~~~~lR~~ 1295 (1446)
.|+++||+++|++ ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+. ..+...+|++
T Consensus 5 ~l~~~~l~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSD-GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCC-CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 4899999999963 246999999999999999999999999999999999999999999999999984 3446678999
Q ss_pred eEEEeCCC--CCCCCcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000521 1296 FAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1446)
Q Consensus 1296 i~~VpQdp--~lF~gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1370 (1446)
++|+||+| .+|+.|+++|+.+.. ..+.++.++. ..+.++.+|++........+||+|||||++|||||+.
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~ 158 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVM 158 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999998 578899999996521 1232222221 1223334466555566677899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhh
Q 000521 1371 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+. .||||++|++|++++.|.+.+++
T Consensus 159 ~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 159 EPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVF 230 (283)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999987653 799999999999987 59999999999999999988654
No 173
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=6e-39 Score=362.39 Aligned_cols=213 Identities=26% Similarity=0.401 Sum_probs=181.7
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.+. +++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEE
Confidence 689999999963 46999999999999999999999999999999999999999999999999998776544 458999
Q ss_pred EeCCCCCC-CCcHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1299 VPQSPFLF-EGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1299 VpQdp~lF-~gTIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+||++.++ ..|+++|+..... .+.++.. ....+.++.+|++...+....+||||||||++||||++++|+|
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~l 153 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARLGLAERADDKVRELNGGHRRRVEIARALLHRPAL 153 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999874 5799999965321 1211111 1223445555777767777778999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1375 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||||++||.++.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|.+..++
T Consensus 154 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (236)
T TIGR03864 154 LLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELR 220 (236)
T ss_pred EEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 99999999999999999999998764 379999999999999889999999999999999886543
No 174
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-39 Score=366.47 Aligned_cols=215 Identities=28% Similarity=0.413 Sum_probs=181.6
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCceEEEcCeeCCC--CChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1290 (1446)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 369999999999999999999999999999999999975 589999999999975 3455
Q ss_pred hHhcceEEEeCCCCCCCCcHHHhcCCCC----CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFH----MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~gTIR~NLdp~~----~~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
.+|++++|+||++.+|++|+++|+.+.. ... ++++.++++.+++.+.+ +...+....+||||||||+
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq~qrv 158 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEV-----KDRLHESALGLSGGQQQRL 158 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhh-----hHHhhCCcccCCHHHHHHH
Confidence 7789999999999999999999996421 111 23344555555543322 2234556678999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++++|+||||||||++||.++.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 159 CIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999987667899999999999865 9999999999999999887553
No 175
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-39 Score=362.61 Aligned_cols=215 Identities=28% Similarity=0.394 Sum_probs=180.5
Q ss_pred EEEEEEEEEecCC--CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChH---hHh
Q 000521 1219 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLR 1293 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR 1293 (1446)
|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 7899999999643 12699999999999999999999999999999999999999999999999999877654 347
Q ss_pred cceEEEeCCCCCCC-CcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000521 1294 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1446)
Q Consensus 1294 ~~i~~VpQdp~lF~-gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1369 (1446)
++++|+||+|.+|. .|+++|+.... ..+..+.. ....+.++.+|++........+||+|||||++||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~ 156 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIE-----ERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALA 156 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHh
Confidence 89999999999997 59999986421 11111111 11233444456665566666789999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1370 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
++|++|||||||++||..+.+.+.+.|++.. .++|||+|||+++.+.. ||++++|++|++++.|.+.++
T Consensus 157 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (233)
T cd03258 157 NNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEV 228 (233)
T ss_pred cCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999998764 37899999999999875 899999999999999987654
No 176
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-39 Score=378.83 Aligned_cols=214 Identities=22% Similarity=0.323 Sum_probs=180.4
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++|++++|+.+ ..+|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ +++|+
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 38999999999422 4699999999999999999999999999999999999999999999999999988764 47899
Q ss_pred EEeCCCCCCCC-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1298 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1298 ~VpQdp~lF~g-TIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
||||++.+|+. |+++|+.+... .+..+..+ ...+.++.+|++........+||||||||++|||||+++|+
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~ 154 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEE-----RVAEAARILELEPLLDRKPRELSGGQRQRVAMGRAIVREPA 154 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999975 99999975422 22222211 11223333355555556667899999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhh
Q 000521 1374 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+. -||+|++|++|++++.|+|..++
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~ 223 (356)
T PRK11650 155 VFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVY 223 (356)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHH
Confidence 9999999999999999999999987643 789999999999876 48999999999999999998764
No 177
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=7.6e-39 Score=364.09 Aligned_cols=214 Identities=30% Similarity=0.440 Sum_probs=180.1
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC-----CceEEEcCeeCCCC--ChHh
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIINT--PVRD 1291 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~i--~~~~ 1291 (1446)
++++||+++|+. .++++|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++... +...
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGE--KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECC--eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 789999999964 35999999999999999999999999999999999999998 99999999999763 4567
Q ss_pred HhcceEEEeCCCCCCCCcHHHhcCCCC---C-CCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000521 1292 LRGRFAVVPQSPFLFEGSLRDNLDPFH---M-NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1363 (1446)
Q Consensus 1292 lR~~i~~VpQdp~lF~gTIR~NLdp~~---~-~~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1363 (1446)
.|++++|+||++.+|+.|+++|+.... . .+. +++.++++..++.+.++ ........+||||||||++
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~~~~~LSgG~~qrv~ 154 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-----DRLHDSALGLSGGQQQRLC 154 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-----hHhhCCcccCCHHHHHHHH
Confidence 788999999999999999999996421 1 111 22333344333321110 4455666789999999999
Q ss_pred HHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1364 LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||++++|+++||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 155 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 155 IARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999887667899999999998865 8999999999999999886553
No 178
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-38 Score=376.73 Aligned_cols=210 Identities=27% Similarity=0.406 Sum_probs=181.6
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
..|+++|++++|.. ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+.+.+ |+++
T Consensus 5 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 5 NFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred cEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 46999999999963 4699999999999999999999999999999999999999999999999999887753 6789
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCCC---CChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFHM---NDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~~---~~d~----ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1368 (1446)
++|+|++.+|+. |+++|+.+.-. .+++ ++.++++.+ |++.........||||||||++|||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~---------gl~~~~~r~~~~LSgGq~QRVaLARaL 151 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELV---------DLAGFEDRYVDQISGGQQQRVALARAL 151 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHc---------CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 999999999986 99999975421 2222 333444444 454444555678999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1369 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+++|++|+||||||+||..+.+.+++.|++..+ ++|+|+|||+++.+.. ||||+||++|++++.|+|..++
T Consensus 152 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~ 225 (351)
T PRK11432 152 ILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELY 225 (351)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999987654 7999999999999865 8999999999999999998765
No 179
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.9e-39 Score=355.30 Aligned_cols=202 Identities=29% Similarity=0.452 Sum_probs=174.1
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|+++||+++|+. .++|+|+||++++| ++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 i~~~~~~~~~~~--~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK--KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC--EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 579999999964 36999999999999 99999999999999999999999999999999999998777 778999999
Q ss_pred EeCCCCCCCC-cHHHhcCCCC---CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000521 1299 VPQSPFLFEG-SLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1446)
Q Consensus 1299 VpQdp~lF~g-TIR~NLdp~~---~~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1370 (1446)
+||+|.+|.+ |+++|+.... ..+ ++++.++++.+++.+ .......+||+|||||++||||+++
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~---------~~~~~~~~LS~G~~qrv~la~al~~ 147 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGD---------RAKKKIGSLSGGMRRRVGIAQALVG 147 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHH---------HHhCchhhCCHHHHHHHHHHHHHhc
Confidence 9999999986 9999986421 111 223444555554443 3334445799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEe
Q 000521 1371 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~ 1433 (1446)
+|++|||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 148 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 148 DPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999987667999999999999875 8999999999998865
No 180
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.6e-39 Score=356.01 Aligned_cols=204 Identities=31% Similarity=0.469 Sum_probs=172.9
Q ss_pred EEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEE
Q 000521 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1446)
Q Consensus 1220 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1299 (1446)
+++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 47899999965334699999999999999999999999999999999999999999999999999888888889999999
Q ss_pred eCCCC--CCCCcHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1300 PQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1300 pQdp~--lF~gTIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
||+|. ++..|+++|+..... .++.+..+ ...+.++.+|++.........||||||||++||||++++|++
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~l 155 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELVGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDI 155 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 99983 677899999965311 12211111 122334444666556666678999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCE
Q 000521 1375 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGH 1428 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ 1428 (1446)
|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 156 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 156 LLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999998764 37899999999999987 99999999985
No 181
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=370.19 Aligned_cols=216 Identities=28% Similarity=0.392 Sum_probs=181.2
Q ss_pred EEEEEEEEEecCCC---CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCC----CChHh
Q 000521 1219 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----TPVRD 1291 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~----i~~~~ 1291 (1446)
++++|++++|++.. .++|+||||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 79999999996432 469999999999999999999999999999999999999999999999999963 34667
Q ss_pred HhcceEEEeCCC--CCCCCcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000521 1292 LRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1365 (1446)
Q Consensus 1292 lR~~i~~VpQdp--~lF~gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LA 1365 (1446)
.|++++|+||+| .+|+.|+++|+.+.. ..+.++..+. ..+.++.+||+. ........||||||||++||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lA 157 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQK-----AREMIELVGLPEELLARSPFELSGGQMRRVAIA 157 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHCCCChhhhhCCcccCCHHHHHHHHHH
Confidence 888999999998 588889999996432 1233322211 223344446653 34556678999999999999
Q ss_pred HHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|||+.+|++|||||||++||+.+...+.+.|++..+ +.|||+|||+++.+.. ||||++|++|++++.|.+..++
T Consensus 158 raL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 234 (290)
T PRK13634 158 GVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIF 234 (290)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999987643 7899999999999864 8999999999999999887654
No 182
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=7e-39 Score=353.04 Aligned_cols=201 Identities=25% Similarity=0.378 Sum_probs=171.3
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|++|+|.. +++++|+||++++||+++|+||||||||||||+|.|.++|.+|+|.++|
T Consensus 2 ~L~~~~ls~~y~~------~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelA 75 (258)
T COG1120 2 MLEVENLSFGYGG------KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELA 75 (258)
T ss_pred eeEEEEEEEEECC------eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHh
Confidence 3678999999963 3459999999999999999999999999999999999999999999998
Q ss_pred -eEEEEcCCCCCCC-ccHHHHHhcCCCC-----------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000521 669 -SIAYVPQVPWILS-GTIRDNILFGKNY-----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1446)
Q Consensus 669 -~i~yv~Q~p~l~~-~ti~~nI~~g~~~-----------~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 735 (1446)
.+||+||++.... -||+|-+.+|+.. |++...++++.+++++-. ...-.+||||||
T Consensus 76 k~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-----------~r~~~~LSGGer 144 (258)
T COG1120 76 KKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-----------DRPVDELSGGER 144 (258)
T ss_pred hhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-----------cCcccccChhHH
Confidence 5999999986654 4999999998531 233455667777776432 334568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcch-hhhCCEEEEEeCCEEEEecChh
Q 000521 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSA 814 (1446)
Q Consensus 736 qRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~-l~~ad~i~~l~~G~i~~~g~~~ 814 (1446)
|||.|||||+++|+|++||||||+||....-++++.+..-...+|+|+|+|+|+++. +.+||++++|++|++..+|+++
T Consensus 145 Qrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~ 224 (258)
T COG1120 145 QRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPE 224 (258)
T ss_pred HHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcc
Confidence 999999999999999999999999999999999987432223457899999999987 5679999999999999999998
Q ss_pred HHHh
Q 000521 815 DLAV 818 (1446)
Q Consensus 815 ~l~~ 818 (1446)
|++.
T Consensus 225 evlT 228 (258)
T COG1120 225 EVLT 228 (258)
T ss_pred hhcC
Confidence 8764
No 183
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.4e-38 Score=376.42 Aligned_cols=213 Identities=27% Similarity=0.391 Sum_probs=183.7
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++|++++|+. ..+|+|+||++++||.++|+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ |++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999964 4689999999999999999999999999999999999999999999999999887764 67899
Q ss_pred EEeCCCCCCC-CcHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1298 VVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1298 ~VpQdp~lF~-gTIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
||+|++.+|+ .|+++|+.+... .+.++.. ....+.++.+||+........+||||||||++|||||+++|+
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~-----~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~ 154 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVA-----ERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARALATSPG 154 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999997 599999975321 1222221 123344455577776777778999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1374 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|..++
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~ 223 (353)
T TIGR03265 155 LLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIY 223 (353)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999987643 7899999999998764 8999999999999999998765
No 184
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-38 Score=369.12 Aligned_cols=217 Identities=24% Similarity=0.318 Sum_probs=180.5
Q ss_pred cEEEEEEEEEecCCC---CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCC--------
Q 000521 1218 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN-------- 1286 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~-------- 1286 (1446)
.|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 389999999996432 269999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CChHhHhcceEEEeCCC--CCCCCcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCc-
Q 000521 1287 ----------------TPVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLE- 1344 (1446)
Q Consensus 1287 ----------------i~~~~lR~~i~~VpQdp--~lF~gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLd- 1344 (1446)
.+...+|++++||||+| .+|..|+++|+.+.. ..+.+++.+. ..+.++.+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~ 156 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKR-----AAKYIELVGLDE 156 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHcCCCh
Confidence 13457889999999987 678889999997542 1233332221 12233444665
Q ss_pred hhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHh-hcCEEE
Q 000521 1345 TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEIL 1422 (1446)
Q Consensus 1345 t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIl 1422 (1446)
........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+. .||||+
T Consensus 157 ~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~ 236 (305)
T PRK13651 157 SYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTI 236 (305)
T ss_pred hhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEE
Confidence 34566677899999999999999999999999999999999999999999998753 4899999999999875 599999
Q ss_pred EEeCCEEEEEeccchhh
Q 000521 1423 ILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1423 vl~~G~vvE~~~~~~~~ 1439 (1446)
+|++|++++.|.|.+++
T Consensus 237 vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 237 FFKDGKIIKDGDTYDIL 253 (305)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999998765
No 185
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.1e-38 Score=358.85 Aligned_cols=211 Identities=25% Similarity=0.386 Sum_probs=175.4
Q ss_pred EEEEEEEEEecCCC--CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh---HhHh
Q 000521 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLR 1293 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR 1293 (1446)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 369999999999999999999999999999999999999999999999999988773 5778
Q ss_pred cceEEEeCCC--CCC-CCcHHHhcCCC----CCCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHH
Q 000521 1294 GRFAVVPQSP--FLF-EGSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLA 1365 (1446)
Q Consensus 1294 ~~i~~VpQdp--~lF-~gTIR~NLdp~----~~~~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LA 1365 (1446)
++++|+||+| .++ ..|+++|+... ....+++..+ .+ ..+.++.+|++ ........+||+|||||++||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~---~~-~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~la 157 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARK---EA-VLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIA 157 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHH---HH-HHHHHHHCCCChhHhhCCchhcCHHHHHHHHHH
Confidence 8999999999 344 46999998532 1111111111 00 12344455774 456677778999999999999
Q ss_pred HHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHh-hcCEEEEEeCCEEEEEe
Q 000521 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~ 1433 (1446)
||++++|+||||||||++||.++.+.+.+.|++..+ ++|||++||+++.+. .||+|++|++|++++.|
T Consensus 158 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 158 RALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999987653 789999999999988 59999999999998764
No 186
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=9.4e-39 Score=360.15 Aligned_cols=214 Identities=24% Similarity=0.364 Sum_probs=182.0
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhH-hcceE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1297 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1297 (1446)
++++||+++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 578999999963 369999999999999999999999999999999999999999999999999988776554 57899
Q ss_pred EEeCCCCCCCC-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1298 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1298 ~VpQdp~lF~g-TIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
|+||++.+|++ |+++|+..... ...++.. ..+.+.++.+|++........+||+|||||++||||++++|+
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 153 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEFHITHLRKSKASSLSGGERRRVEIARALATNPK 153 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999987 99999964321 1111111 123344555577766777777899999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1374 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+|||||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 154 llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 221 (232)
T cd03218 154 FLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIA 221 (232)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhh
Confidence 999999999999999999999998764 47899999999987765 8999999999999999887654
No 187
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.2e-38 Score=371.73 Aligned_cols=215 Identities=27% Similarity=0.367 Sum_probs=180.5
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
..|+++|++++|++ ..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|.++|.|+...+ ...|+++
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 46999999999964 46999999999999999999999999999999999999999999999999998755 4578999
Q ss_pred EEEeCCCCCCC-CcHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1297 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1297 ~~VpQdp~lF~-gTIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
+|+||+|.+|. .|++||+.++.. .++.+..+. ..+.++.+|++........+||+|||||++|||||+.+|
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P 157 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARAL-----VPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDP 157 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCC
Confidence 99999999886 599999975332 122222111 122333334443334444579999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++|+|||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|++..+.
T Consensus 158 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~ 226 (306)
T PRK13537 158 DVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALI 226 (306)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999998864 47899999999999976 9999999999999999987653
No 188
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-39 Score=364.94 Aligned_cols=215 Identities=25% Similarity=0.337 Sum_probs=180.7
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCC--CCChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII--NTPVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~--~i~~~ 1290 (1446)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 4899999999964 4699999999999999999999999999999999999987 4999999999997 45566
Q ss_pred hHhcceEEEeCCCCCCCC-cHHHhcCCCC---C--CCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH---M--NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1360 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~g-TIR~NLdp~~---~--~~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQ 1360 (1446)
.+|++++++||+|.+|++ |+++|+.... . ... +++.++++..++.+.+ .........+|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~q 156 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEV-----KDRLNDYPSNLSGGQRQ 156 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccch-----hhhhccChhhCCHHHHH
Confidence 788999999999999976 9999996421 1 011 2334444444432211 12345556689999999
Q ss_pred HHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1361 rl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|++||||++++|++|||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 157 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 157 RLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKVF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999999865 8999999999999999887653
No 189
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=9.7e-39 Score=352.82 Aligned_cols=198 Identities=27% Similarity=0.411 Sum_probs=168.8
Q ss_pred EEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEE
Q 000521 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1446)
Q Consensus 1220 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1299 (1446)
+++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 468999999642 469999999999999999999999999999999999999999999999999864 4567889999
Q ss_pred eCCC--CCCCCcHHHhcCCCCC-C--ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1300 PQSP--FLFEGSLRDNLDPFHM-N--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1300 pQdp--~lF~gTIR~NLdp~~~-~--~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
||+| .+|+.|++||+..+.. . .++++.++++.+++ +.........||||||||++||||++++|++
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l---------~~~~~~~~~~LS~G~~qrv~laral~~~p~l 147 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDL---------YALKERHPLSLSGGQKQRLAIAAALLSGKDL 147 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCC---------chhcCCCchhCCHHHHHHHHHHHHHHhCCCE
Confidence 9998 4678899999975422 1 12345555555554 3334444457999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHh-cCCcEEEEeccCchhHhh-cCEEEEEeCCEEE
Q 000521 1375 LCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLN-MDEILILDHGHLV 1430 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~-~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vv 1430 (1446)
|+|||||++||+++.+.+.+.|++. .+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 148 LIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999876 357899999999999875 8999999999985
No 190
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.8e-38 Score=360.21 Aligned_cols=218 Identities=22% Similarity=0.347 Sum_probs=184.0
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhH-hcceE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1297 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1297 (1446)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 3 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (242)
T TIGR03411 3 LYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIG 80 (242)
T ss_pred EEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCee
Confidence 789999999964 369999999999999999999999999999999999999999999999999988776654 56799
Q ss_pred EEeCCCCCCCC-cHHHhcCCCCCCChHHH-------HHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000521 1298 VVPQSPFLFEG-SLRDNLDPFHMNDDLKI-------WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1446)
Q Consensus 1298 ~VpQdp~lF~g-TIR~NLdp~~~~~d~ei-------~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1369 (1446)
|+||++.+|++ |+++|+....... ..+ ........+.+.++.+|++.........||||||||++||||++
T Consensus 81 ~~~q~~~~~~~~tv~~nl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrv~laral~ 159 (242)
T TIGR03411 81 RKFQKPTVFENLTVFENLELALPRD-KSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIGMLLM 159 (242)
T ss_pred EeccccccCCCCCHHHHHHHhhhcc-cccccccccccHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHh
Confidence 99999999987 9999997532110 000 00011112334445557776667777789999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1370 KSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++|++|+|||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++..+.
T Consensus 160 ~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~ 230 (242)
T TIGR03411 160 QDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQ 230 (242)
T ss_pred cCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHh
Confidence 999999999999999999999999999987668999999999999975 9999999999999999887653
No 191
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.2e-38 Score=353.05 Aligned_cols=202 Identities=27% Similarity=0.387 Sum_probs=174.4
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|+++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++... ..+|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 578999999953 4699999999999999999999999999999999999999999999999998764 567889999
Q ss_pred EeCCCCCCC-CcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1299 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1299 VpQdp~lF~-gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+||++.+|+ .|+++|+.++. ..+++++.++++..++.+ ........||+|||||++||||++++|++
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~---------~~~~~~~~LS~G~~qrv~la~al~~~p~l 147 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKD---------SAKKKVKGFSLGMKQRLGIALALLGNPDL 147 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHH---------HHhhhHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998875 69999996532 123445566666665543 33444557999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEe
Q 000521 1375 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~ 1433 (1446)
|+|||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 148 LILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999998754 47899999999999875 8999999999998865
No 192
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=365.01 Aligned_cols=218 Identities=27% Similarity=0.385 Sum_probs=183.2
Q ss_pred CCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCCC--C
Q 000521 1215 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--T 1287 (1446)
Q Consensus 1215 ~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i 1287 (1446)
+.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3468999999999963 4699999999999999999999999999999999999975 89999999999975 3
Q ss_pred ChHhHhcceEEEeCCCCCCCCcHHHhcCCCC---CC--C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhH
Q 000521 1288 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN--D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQ 1358 (1446)
Q Consensus 1288 ~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~---~~--~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQ 1358 (1446)
+...+|++++|+||+|.+|++|+++|+.+.. .. + ++++.++++.+++.+.+ ....+....+|||||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq 168 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEV-----KDRLHEPGTGLSGGQ 168 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhh-----hHHhhCCcccCCHHH
Confidence 4567889999999999999999999996421 11 1 12334445554443221 123455667899999
Q ss_pred HHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccch
Q 000521 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1359 rQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
|||++|||||+.+|++|||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|.+..
T Consensus 169 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 248 (267)
T PRK14235 169 QQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEK 248 (267)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999887667899999999999865 89999999999999998765
Q ss_pred hh
Q 000521 1438 YF 1439 (1446)
Q Consensus 1438 ~~ 1439 (1446)
++
T Consensus 249 ~~ 250 (267)
T PRK14235 249 MF 250 (267)
T ss_pred HH
Confidence 53
No 193
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.9e-38 Score=373.74 Aligned_cols=213 Identities=23% Similarity=0.331 Sum_probs=180.3
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+.+.+. .|++++
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 3899999999964 369999999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEeCCCCCCCC-cHHHhcCCCCC-------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000521 1298 VVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1446)
Q Consensus 1298 ~VpQdp~lF~g-TIR~NLdp~~~-------~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1369 (1446)
||||++.+|+. |+++|+.+... .+.++..+ ...+.++.+|++.........||||||||++|||||+
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~ 152 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKA-----KVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARALA 152 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHh
Confidence 99999999985 99999975421 12122111 1123333345555555666789999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1370 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++|++|+||||||+||..+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|+|..++
T Consensus 153 ~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 153 VEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999987653 7899999999998765 8999999999999999998765
No 194
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-38 Score=365.14 Aligned_cols=213 Identities=22% Similarity=0.343 Sum_probs=183.4
Q ss_pred cEEEEEEEEEecCC-CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1218 LIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
.|+++||+++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743 24699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEeCCC--CCCCCcHHHhcCCCC---CCChHHH----HHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000521 1297 AVVPQSP--FLFEGSLRDNLDPFH---MNDDLKI----WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1446)
Q Consensus 1297 ~~VpQdp--~lF~gTIR~NLdp~~---~~~d~ei----~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1446)
+|+||+| .++..|+.+|+.+.. ..+++++ .++++.+ |++.........||||||||++||||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~lAra 154 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAV---------NMLDFKTREPARLSGGQKQRVAVAGI 154 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHC---------CCHhHhhCCcccCCHHHHHHHHHHHH
Confidence 9999998 467789999997431 1233332 3334444 44444455566899999999999999
Q ss_pred hccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1368 LLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++++|+||||||||++||.++.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|.+..++
T Consensus 155 L~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (277)
T PRK13642 155 IALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELF 228 (277)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999987643 78999999999999889999999999999999887654
No 195
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-38 Score=356.09 Aligned_cols=207 Identities=30% Similarity=0.372 Sum_probs=172.0
Q ss_pred EEEEEEEEEecCCC--CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 57899999996421 469999999999999999999999999999999999999999999999999863 46789
Q ss_pred EEEeCCCCCCC-CcHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1297 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1297 ~~VpQdp~lF~-gTIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
+|+||+|.+|+ .|+++|+..... .+.++.. ....+.++.+|++........+||||||||++||||++++|
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p 150 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEAR-----ERAEELLELVGLSGFENAYPHQLSGGMRQRVALARALAVDP 150 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999987 699999864211 1111110 11223344445655555566689999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEe--CCEEEEEecc
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILD--HGHLVCISFI 1435 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~--~G~vvE~~~~ 1435 (1446)
+++||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|+ +|+++|.++.
T Consensus 151 ~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 151 DVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999998763 37899999999998765 89999999 7999998764
No 196
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.2e-38 Score=321.05 Aligned_cols=206 Identities=24% Similarity=0.393 Sum_probs=178.0
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|.+++|.++|.. .+. ..+++|++||+|||+|+||||||||++++.||..|.+|+|.|+|+|....++. ++-+++
T Consensus 2 l~L~~V~~~y~~-~~~---~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGH-LPM---RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCc-ceE---EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 567899999964 332 57899999999999999999999999999999999999999999999888775 467999
Q ss_pred EeCCCCCCCC-cHHHhcCCCC----CC---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000521 1299 VPQSPFLFEG-SLRDNLDPFH----MN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1446)
Q Consensus 1299 VpQdp~lF~g-TIR~NLdp~~----~~---~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1370 (1446)
+.||.-||.- ||++|+..+- .. ..+.+..++.++|+..+.+.+ ...||||||||++|||+++|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RL---------P~~LSGGqRQRvALARclvR 146 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRL---------PGELSGGQRQRVALARCLVR 146 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhC---------ccccCchHHHHHHHHHHHhc
Confidence 9999999986 9999987553 22 234577788888877665433 44799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1371 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+.+||+||||.|+||+.-.+.+...+.+.. ++.|+++|||.++.+.. +||++++++|||+..|.-+++|
T Consensus 147 ~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~ 218 (231)
T COG3840 147 EQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELL 218 (231)
T ss_pred cCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHh
Confidence 999999999999999999999988887654 57899999999998765 8999999999999999877665
No 197
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=5.8e-38 Score=360.23 Aligned_cols=207 Identities=26% Similarity=0.384 Sum_probs=184.2
Q ss_pred CccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcc
Q 000521 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1295 (1446)
Q Consensus 1216 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1295 (1446)
.+.|+++|+++.. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+|| +
T Consensus 37 ~~~l~i~nls~~~----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLVG----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEec----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 4569999999852 3699999999999999999999999999999999999999999999998 3
Q ss_pred eEEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1296 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1296 i~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
++|+||++.+|++|+++|+.+.....+.++.++++.+++.+.+..+ +.++.+++.+.+||+|||||++||||++++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999865444445667778888888877776 77888888888999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHH-HHHhcCCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1374 VLCLDECTANVDAQTASILQNA-ISSECKGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~-I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||||||++||+++.+.+.+. +++..+++|||+|||+++.+..||+|++|++|++++.|.+..+.
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 246 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQ 246 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999888764 45555689999999999999999999999999999999887654
No 198
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=362.32 Aligned_cols=215 Identities=27% Similarity=0.377 Sum_probs=181.8
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCCCCChHhH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTPVRDL 1292 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i~~~~l 1292 (1446)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999964 3699999999999999999999999999999999999974 69999999999998888889
Q ss_pred hcceEEEeCCCCCC-CCcHHHhcCCCCC-----CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1293 RGRFAVVPQSPFLF-EGSLRDNLDPFHM-----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1293 R~~i~~VpQdp~lF-~gTIR~NLdp~~~-----~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
|++++|+||+|.+| +.|+++|+.+... .. ++++.++++.+++.+.+ +........+||||||||+
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgG~~qrv 155 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEV-----KDRLDAPAGKLSGGQQQRL 155 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcch-----hhhhcCCcccCCHHHHHHH
Confidence 99999999999755 5799999964211 01 12344555555443211 1233445568999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++++|+||+|||||++||..+.+.+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|.+.+++
T Consensus 156 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 156 CIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 999999999999999999999999999999999988767899999999999986 58999999999999999887654
No 199
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1e-38 Score=376.53 Aligned_cols=202 Identities=26% Similarity=0.336 Sum_probs=173.3
Q ss_pred CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhH----hcceEEEeCCCCCCCC
Q 000521 1233 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGRFAVVPQSPFLFEG 1308 (1446)
Q Consensus 1233 ~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l----R~~i~~VpQdp~lF~g 1308 (1446)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.|+...+..++ |++++||||++.+|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 469999999999999999999999999999999999999999999999999999998888 7899999999999985
Q ss_pred -cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCC
Q 000521 1309 -SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANV 1384 (1446)
Q Consensus 1309 -TIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~l 1384 (1446)
|+++|+.+... .+.++..+ ...+.++.+||+...+....+||||||||++|||||+++|+|||||||||+|
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saL 160 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKE-----KALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSAL 160 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 99999964321 22222211 1122333336666667777789999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhc--CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhh
Q 000521 1385 DAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1385 D~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|+.+.+.+++.+++.. .++|+|+|||+++.+. -||||++|++|++++.|+|..++
T Consensus 161 D~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~ 218 (363)
T TIGR01186 161 DPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEIL 218 (363)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHH
Confidence 9999999999998763 3799999999999865 49999999999999999988764
No 200
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.7e-38 Score=353.28 Aligned_cols=206 Identities=27% Similarity=0.407 Sum_probs=173.3
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++|
T Consensus 1 i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGN--VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECC--eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 578999999964 3699999999999999999999999999999999999999999999999999766543 568999
Q ss_pred EeCCCCCCC-CcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1299 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1299 VpQdp~lF~-gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+||++.+|. .|+++|+.... ....++..+ .+.+.++.+|++.........||+|||||++||||++++|++
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 151 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKV 151 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999886 59999997531 112222111 112233344666556666678999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEe
Q 000521 1375 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~ 1433 (1446)
++|||||++||+++.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|++|+++++|
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 152 FLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999998764 37899999999999876 8999999999999876
No 201
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=365.60 Aligned_cols=218 Identities=28% Similarity=0.432 Sum_probs=185.0
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCC---ceEEEcCeeCCCCChHhHh
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG---GQILVDGLNIINTPVRDLR 1293 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~---G~I~IDG~di~~i~~~~lR 1293 (1446)
+.|+++|++++|++...++|+|+||+|++||.+||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999996544469999999999999999999999999999999999999987 8999999999888877889
Q ss_pred cceEEEeCCC--CCCCCcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000521 1294 GRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1446)
Q Consensus 1294 ~~i~~VpQdp--~lF~gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1368 (1446)
++++|+||+| .+++.|+++|+.+.. ..++++..+ ...+.++.+|++........+||+|||||++||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LS~G~~qrv~laral 158 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIK-----IVRDVLADVGMLDYIDSEPANLSGGQKQRVAIAGIL 158 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHCCChhHhcCCcccCCHHHHHHHHHHHHH
Confidence 9999999998 466889999997531 122322111 112223333555555666678999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1369 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+++|++|||||||++||..+.+.+.+.|++..+ ++|||++||+++.+..||+|++|++|++++.|.+.+++
T Consensus 159 ~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 159 AVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999987653 78999999999999889999999999999999987664
No 202
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-38 Score=363.65 Aligned_cols=216 Identities=24% Similarity=0.373 Sum_probs=183.6
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCceEEEcCeeCCC--CCh
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPV 1289 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~ 1289 (1446)
..|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 46999999999953 469999999999999999999999999999999999997 579999999999964 345
Q ss_pred HhHhcceEEEeCCCCCCCCcHHHhcCCCC----CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000521 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1446)
Q Consensus 1290 ~~lR~~i~~VpQdp~lF~gTIR~NLdp~~----~~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1446)
..+|++++|+||++.+|.+|+++|+.... ..+ ++++.++++.+++.+.+ +...+.....||+|||||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-----~~~~~~~~~~LS~G~~qr 171 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-----KDDLHKSALTLSGGQQQR 171 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-----hhhhcCCcccCCHHHHHH
Confidence 67889999999999999999999996531 111 12344445555543222 234566677899999999
Q ss_pred HHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1362 l~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++||||++++|++|+|||||++||..+.+.+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 172 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 172 LCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIF 250 (267)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999999999999988778999999999998865 9999999999999999887654
No 203
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.3e-38 Score=354.46 Aligned_cols=201 Identities=30% Similarity=0.387 Sum_probs=170.8
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh---HhHhcc
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1295 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1295 (1446)
++++|++++|+.. +++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 469999999999999999999999999999999999999999999999999987754 357889
Q ss_pred eEEEeCCCCCCCC-cHHHhcCCCC---CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000521 1296 FAVVPQSPFLFEG-SLRDNLDPFH---MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1446)
Q Consensus 1296 i~~VpQdp~lF~g-TIR~NLdp~~---~~~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1446)
++++||+|.+|+. |+++|+.... ..+. +++.++++.+ |++........+||+|||||++||||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~lara 150 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELV---------GLSHKHRALPAELSGGEQQRVAIARA 150 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc---------CCHHHhhCChhhcCHHHHHHHHHHHH
Confidence 9999999999985 9999996431 1121 2233344443 55544445556899999999999999
Q ss_pred hccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEE
Q 000521 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1429 (1446)
Q Consensus 1368 LLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~v 1429 (1446)
++++|+++||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 151 IVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999998763 57999999999999986 899999999974
No 204
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-38 Score=366.47 Aligned_cols=215 Identities=29% Similarity=0.409 Sum_probs=180.9
Q ss_pred EEEEEEEEEecCCC---CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCC----ChHh
Q 000521 1219 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRD 1291 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~~ 1291 (1446)
|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999996432 3699999999999999999999999999999999999999999999999999764 3567
Q ss_pred HhcceEEEeCCC--CCCCCcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000521 1292 LRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1365 (1446)
Q Consensus 1292 lR~~i~~VpQdp--~lF~gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LA 1365 (1446)
+|++|+|+||+| .+|+.|+++|+.+.. ..++++..+. ..+.++.+|++. ........||||||||++||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la 157 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALVGISESLFEKNPFELSGGQMRRVAIA 157 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCChhhhhCCcccCCHHHHHHHHHH
Confidence 889999999998 578899999996421 1222222211 223344447753 45666678999999999999
Q ss_pred HHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
||++++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|.+..+
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 158 GILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999998764 37899999999998865 899999999999999988654
No 205
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=2.1e-38 Score=340.13 Aligned_cols=172 Identities=35% Similarity=0.591 Sum_probs=162.6
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|+++|++++|+....++++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+.+.+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999999998899999999
Q ss_pred EeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000521 1299 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1378 (1446)
Q Consensus 1299 VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1378 (1446)
++|+|.+|++|+++|+ ||+|||||++||||++++|++||||
T Consensus 81 ~~q~~~~~~~tv~~~l---------------------------------------LS~G~~qrv~la~al~~~p~~lllD 121 (173)
T cd03246 81 LPQDDELFSGSIAENI---------------------------------------LSGGQRQRLGLARALYGNPRILVLD 121 (173)
T ss_pred ECCCCccccCcHHHHC---------------------------------------cCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999998 9999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhhcCEEEEEeCCEE
Q 000521 1379 ECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHL 1429 (1446)
Q Consensus 1379 EaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlvl~~G~v 1429 (1446)
|||++||..+.+.+.+.|++.. +++|+|+++|+++.+..||+|++|++|++
T Consensus 122 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 122 EPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred CCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 9999999999999999998764 47899999999999988999999999975
No 206
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-39 Score=332.75 Aligned_cols=204 Identities=25% Similarity=0.348 Sum_probs=173.6
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCC-----cEEEEeC------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH-----GSIHASG------ 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~-----G~i~~~~------ 668 (1446)
..++++|.++.|.. +.+|+|||++|+++++++++|||||||||||+++.+..+... |+|.++|
T Consensus 6 ~~~~~~~l~~yYg~------~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~ 79 (253)
T COG1117 6 PAIEVRDLNLYYGD------KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDP 79 (253)
T ss_pred ceeEecceeEEECc------hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCC
Confidence 56889999998863 335999999999999999999999999999999999887765 8998877
Q ss_pred ---------eEEEEcCCCCCCCccHHHHHhcCCCCC-------hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 669 ---------SIAYVPQVPWILSGTIRDNILFGKNYD-------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 669 ---------~i~yv~Q~p~l~~~ti~~nI~~g~~~~-------~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
+||.|+|.|.-|+.||+|||.+|.... ++..++.++.++|.+... ....+.+..|||
T Consensus 80 ~~d~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVK-------DrL~~sa~~LSG 152 (253)
T COG1117 80 KVDVVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVK-------DRLHKSALGLSG 152 (253)
T ss_pred CCCHHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhH-------HHhhCCccCCCh
Confidence 599999999999999999999985321 234666677777765543 234677889999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
||+||++||||+.-+|+|+|||||||||||.+..+|-+. +.. +.++-|+|+|||+++.... +|+...+.+|+++|.|
T Consensus 153 GQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeL-i~e-Lk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g 230 (253)
T COG1117 153 GQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEEL-ITE-LKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFG 230 (253)
T ss_pred hHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHH-HHH-HHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEc
Confidence 999999999999999999999999999999998888765 443 5556699999999998765 9999999999999999
Q ss_pred ChhHHHh
Q 000521 812 SSADLAV 818 (1446)
Q Consensus 812 ~~~~l~~ 818 (1446)
+.+++-.
T Consensus 231 ~T~~iF~ 237 (253)
T COG1117 231 PTDKIFT 237 (253)
T ss_pred CHHhhhc
Confidence 9888753
No 207
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-38 Score=362.59 Aligned_cols=215 Identities=28% Similarity=0.382 Sum_probs=179.8
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCceEEEcCeeCCC--CChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1290 (1446)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 4899999999964 469999999999999999999999999999999999997 479999999999864 3455
Q ss_pred hHhcceEEEeCCCCCCCCcHHHhcCCCCC---CCh-----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---NDD-----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~gTIR~NLdp~~~---~~d-----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
.+|+.++|+||++.+|++|+++|+.+... ..+ +++.++++.++++... ....+....+||+|||||+
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~Gq~qr~ 156 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-----KDNLDRNAQAFSGGQQQRI 156 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-----HHHhccChhhCCHHHHHHH
Confidence 67889999999999999999999975311 111 2233344444332100 1223455668999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++++|+++||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|.+.+++
T Consensus 157 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 157 CIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999987668999999999999876 8999999999999999887654
No 208
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-38 Score=362.27 Aligned_cols=216 Identities=23% Similarity=0.360 Sum_probs=182.3
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++|++++|++...++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 48999999999754446999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEeCCCC--CCCCcHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1298 VVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1298 ~VpQdp~--lF~gTIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
|+||+|. ++..|+++|+..... ...++..+ .+.+.++.+|++........+||+|||||++||||++++|
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHR-----RVSEALKQVDMLERADYEPNALSGGQKQRVAIAGVLALNP 161 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 9999994 445689999864321 12222111 1122333345554555566789999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchh
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
++|||||||++||..+.+.+.+.|++..+ ++|+|+|||+++.+..||||++|++|++++.|.+..+
T Consensus 162 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 229 (269)
T PRK13648 162 SVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEI 229 (269)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999987643 7899999999999988999999999999999987654
No 209
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.5e-38 Score=356.32 Aligned_cols=213 Identities=27% Similarity=0.401 Sum_probs=180.9
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCC--ChHhHhcce
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT--PVRDLRGRF 1296 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i--~~~~lR~~i 1296 (1446)
++++|++++|++ +++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999963 4699999999999999999999999999999999999999999999999999864 345678899
Q ss_pred EEEeCCCCCCC-CcHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000521 1297 AVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1446)
Q Consensus 1297 ~~VpQdp~lF~-gTIR~NLdp~~----~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1371 (1446)
+|+||++.+|. .|+++|+.+.. ..+.++..+ ...+.++.+|++.........||+|||||++||||++++
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 154 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVK 154 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHcCChHHHhcChhhcCHHHHHHHHHHHHHhcC
Confidence 99999999886 59999996431 111221111 123445555777666777778999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1372 ~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
|++++|||||++||.++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|.+..+
T Consensus 155 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 223 (240)
T PRK09493 155 PKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVL 223 (240)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHH
Confidence 99999999999999999999999998764 47999999999999865 899999999999999876644
No 210
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-38 Score=361.50 Aligned_cols=215 Identities=28% Similarity=0.403 Sum_probs=180.0
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcC---CCC--CCceEEEcCeeCCCC--ChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL---TPI--CGGQILVDGLNIINT--PVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl---~~~--~~G~I~IDG~di~~i--~~~ 1290 (1446)
.++++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 4899999999964 4699999999999999999999999999999999997 454 589999999999764 346
Q ss_pred hHhcceEEEeCCCCCCCCcHHHhcCCCC---CC-C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~gTIR~NLdp~~---~~-~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
.+|++++|+||+|.+|++|+++|+.+.. .. . +++++++++.+++.+.+ +......+.+||||||||+
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv 155 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEV-----KDKLKESAFALSGGQQQRL 155 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcch-----hhhhhCCcccCCHHHHHHH
Confidence 7788999999999999999999996421 11 1 12233444444432211 2345566778999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++++|+||||||||++||.++.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|.+.+++
T Consensus 156 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 156 CIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999999999999999987678999999999999865 8999999999999999888664
No 211
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=6.2e-38 Score=358.62 Aligned_cols=217 Identities=22% Similarity=0.321 Sum_probs=182.1
Q ss_pred CccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCC--------
Q 000521 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT-------- 1287 (1446)
Q Consensus 1216 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i-------- 1287 (1446)
.+.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 467999999999964 3699999999999999999999999999999999999999999999999998642
Q ss_pred -----ChHhHhcceEEEeCCCCCCCC-cHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCchhh-hcCCCCCCh
Q 000521 1288 -----PVRDLRGRFAVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFV-KESGISFSV 1356 (1446)
Q Consensus 1288 -----~~~~lR~~i~~VpQdp~lF~g-TIR~NLdp~~----~~~d~ei~~aL~~~~L~~~i~~lgLdt~v-~e~G~~LSg 1356 (1446)
....+|++++|+||+|.+|++ |+++|+.... ...+.+.. ..+.+.++.+|++... ......||+
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~~LS~ 155 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEAR-----ERAVKYLAKVGIDERAQGKYPVHLSG 155 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHH-----HHHHHHHHHcCCChhhhhCCcccCCH
Confidence 135678899999999999985 9999986421 11111111 1123344445666544 556678999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEec
Q 000521 1357 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISF 1434 (1446)
Q Consensus 1357 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~ 1434 (1446)
|||||++|||||+++|+++||||||++||.++.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|++++.|.
T Consensus 156 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 235 (257)
T PRK10619 156 GQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGA 235 (257)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998764 48999999999999986 89999999999999998
Q ss_pred cchhh
Q 000521 1435 ICRYF 1439 (1446)
Q Consensus 1435 ~~~~~ 1439 (1446)
+..++
T Consensus 236 ~~~~~ 240 (257)
T PRK10619 236 PEQLF 240 (257)
T ss_pred HHHhh
Confidence 77654
No 212
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-38 Score=367.17 Aligned_cols=218 Identities=24% Similarity=0.343 Sum_probs=181.0
Q ss_pred CccEEEEEEEEEecCCC---CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCC----C-
Q 000521 1216 QGLIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----T- 1287 (1446)
Q Consensus 1216 ~g~I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~----i- 1287 (1446)
.|.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 47799999999996432 259999999999999999999999999999999999999999999999999853 2
Q ss_pred ChHhHhcceEEEeCCC--CCCCCcHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHH
Q 000521 1288 PVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQL 1361 (1446)
Q Consensus 1288 ~~~~lR~~i~~VpQdp--~lF~gTIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~~LSgGQrQr 1361 (1446)
+...+|++++|+||+| .+|+.|+++|+.+... ...++..+. +.+.++.+|++ ...+.....||+|||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~ll~~~~L~~~~~~~~~~~LS~Gq~qr 158 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK-----VPELLKLVQLPEDYVKRSPFELSGGQKRR 158 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCChhHhcCChhhCCHHHHHH
Confidence 4567888999999998 4678899999964321 222222211 12333344663 34556667899999999
Q ss_pred HHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchh
Q 000521 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1362 l~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
++||||++++|++|||||||++||+++.+.+.+.|++.. .++|||+|||+++.+. .||+|++|++|++++.|.+..+
T Consensus 159 v~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 238 (289)
T PRK13645 159 VALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEI 238 (289)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999998764 3789999999999876 4899999999999999887654
No 213
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=5.1e-38 Score=358.21 Aligned_cols=215 Identities=25% Similarity=0.354 Sum_probs=181.2
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCC--------h
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--------V 1289 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~--------~ 1289 (1446)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG--QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 3899999999964 36999999999999999999999999999999999999999999999999987542 3
Q ss_pred HhHhcceEEEeCCCCCCC-CcHHHhcCCC----CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000521 1290 RDLRGRFAVVPQSPFLFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1364 (1446)
Q Consensus 1290 ~~lR~~i~~VpQdp~lF~-gTIR~NLdp~----~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1364 (1446)
..+|++++|+||+|.+|+ .|+++|+... .....++..+ ...+.++.+|++........+||||||||++|
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~Gq~qrv~l 155 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA-----RARELLAKVGLAGKETSYPRRLSGGQQQRVAI 155 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCcchhhCChhhCChHHHHHHHH
Confidence 567889999999999886 6999999642 1112211111 12344455577666666777899999999999
Q ss_pred HHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1365 ARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|||++++|++|||||||++||.++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 156 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 156 ARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999998764 37899999999999875 8999999999999998876553
No 214
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.3e-38 Score=374.85 Aligned_cols=215 Identities=24% Similarity=0.370 Sum_probs=183.8
Q ss_pred CccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCC--ceEEEcCeeCCCCChHhHh
Q 000521 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG--GQILVDGLNIINTPVRDLR 1293 (1446)
Q Consensus 1216 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~--G~I~IDG~di~~i~~~~lR 1293 (1446)
.|.|+++||+++|+. ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++.+.+. .+
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 478999999999964 369999999999999999999999999999999999999999 999999999987765 36
Q ss_pred cceEEEeCCCCCCCC-cHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000521 1294 GRFAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1446)
Q Consensus 1294 ~~i~~VpQdp~lF~g-TIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1369 (1446)
+++++|+|++.+|+. |+++|+.+.- ..+++++.+ ...+.++.+||+........+||||||||++|||||+
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~-----~v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~ 153 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE-----RVADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIA 153 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHh
Confidence 789999999999986 9999997532 123232222 1223344446666666677789999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC---CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1370 KSSKVLCLDECTANVDAQTASILQNAISSECK---GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~---~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++|++|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|..++
T Consensus 154 ~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 154 IEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred cCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999887543 6899999999998765 8999999999999999988765
No 215
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=362.72 Aligned_cols=215 Identities=24% Similarity=0.377 Sum_probs=180.4
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCCCC--ChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1290 (1446)
.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 12 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 89 (258)
T PRK14268 12 QIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVV 89 (258)
T ss_pred eEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHH
Confidence 6999999999963 4699999999999999999999999999999999999985 799999999998653 345
Q ss_pred hHhcceEEEeCCCCCCCCcHHHhcCCCC---CCChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1363 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~gTIR~NLdp~~---~~~d~----ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1363 (1446)
.+|++++|+||++.+|+.|+++|+.+.. ..+.+ ++.++++.+++.+.+ +.........||||||||++
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgG~~qrv~ 164 (258)
T PRK14268 90 ELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-----SDRLKSPALSLSGGQQQRLC 164 (258)
T ss_pred HHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-----hhhhcCChhhCCHHHHHHHH
Confidence 6788999999999999999999996421 12222 234444444432111 23344556689999999999
Q ss_pred HHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1364 LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|||||+++|+||+|||||++||.++.+.+.+.|++..+++|+|+|||+++.+.+ ||+|++|++|++++.|.+..++
T Consensus 165 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 165 IARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999887668999999999999865 8999999999999999887664
No 216
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-38 Score=363.59 Aligned_cols=214 Identities=27% Similarity=0.425 Sum_probs=179.2
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCceEEEcCeeCCC--CChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1290 (1446)
.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 5999999999963 469999999999999999999999999999999999865 689999999999965 3445
Q ss_pred hHhcceEEEeCCCCCCCCcHHHhcCCCC---C-CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---M-ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~gTIR~NLdp~~---~-~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
.+|++++|+||+|.+|++|+++|+.... . .. ++.+.++++.+++.+. +....+....+||||||||+
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LSgGq~qrl 173 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDE-----VKDRLHSSALSLSGGQQQRL 173 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcc-----hHHHHhcCcccCCHHHHHHH
Confidence 6788999999999999999999986421 1 11 1223344444433211 11334556678999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
+||||++++|++|||||||++||..+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|.+..+
T Consensus 174 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 174 CIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999987667899999999998764 899999999999999887654
No 217
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-38 Score=360.27 Aligned_cols=215 Identities=28% Similarity=0.417 Sum_probs=180.7
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCCC--CCh
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1289 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~ 1289 (1446)
|.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGD--FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECC--ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 57999999999964 3699999999999999999999999999999999999863 69999999999875 455
Q ss_pred HhHhcceEEEeCCCCCCCCcHHHhcCCCCC----CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000521 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1446)
Q Consensus 1290 ~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~----~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1446)
..+|++++|+||+|.+|+.|+++|+..... .+ ++++.++++.+++.+. +....+....+||+|||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDE-----VKDRLKKSALGLSGGQQQR 154 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchh-----hHHHHhcCCCCCCHHHHHH
Confidence 678999999999999999999999964321 11 2233444444443221 1233455667899999999
Q ss_pred HHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1362 l~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
++||||++++|++|+|||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|.+..+
T Consensus 155 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 155 LCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999887668999999999998865 899999999999999877654
No 218
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-38 Score=345.39 Aligned_cols=200 Identities=30% Similarity=0.456 Sum_probs=169.2
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC----------e
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------S 669 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------~ 669 (1446)
..|+++|++++|... ++|+||||++++|++++|+||||||||||+|+|+|.++|.+|+|.+.| +
T Consensus 3 ~~i~v~nl~v~y~~~------~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~ 76 (254)
T COG1121 3 PMIEVENLTVSYGNR------PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLR 76 (254)
T ss_pred cEEEEeeeEEEECCE------eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCe
Confidence 358999999999632 259999999999999999999999999999999999999999999865 5
Q ss_pred EEEEcCCC---CCCCccHHHHHhcCCCC-----------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000521 670 IAYVPQVP---WILSGTIRDNILFGKNY-----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1446)
Q Consensus 670 i~yv~Q~p---~l~~~ti~~nI~~g~~~-----------~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 735 (1446)
||||||.. |=|+.||+|-+..|... |.+..+++++..++. |+. ...-.+|||||+
T Consensus 77 IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~-~~~----------~r~i~~LSGGQ~ 145 (254)
T COG1121 77 IGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGME-DLR----------DRQIGELSGGQK 145 (254)
T ss_pred EEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCch-hhh----------CCcccccCcHHH
Confidence 99999954 77889999999987432 346777888888776 332 334457999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-hCCEEEEEeCCEEEEecChh
Q 000521 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 814 (1446)
Q Consensus 736 qRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 814 (1446)
|||-|||||.++||+|+|||||+|+|+.++..+++- +.....+|+||++||||++.+. ++|+|+.|+ +++...|+++
T Consensus 146 QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~l-L~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~ 223 (254)
T COG1121 146 QRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDL-LKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPE 223 (254)
T ss_pred HHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChh
Confidence 999999999999999999999999999999998875 4332334899999999999866 599999994 5778889988
Q ss_pred HHHh
Q 000521 815 DLAV 818 (1446)
Q Consensus 815 ~l~~ 818 (1446)
+...
T Consensus 224 ~~~~ 227 (254)
T COG1121 224 EVLT 227 (254)
T ss_pred hccC
Confidence 8754
No 219
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=4.8e-38 Score=358.57 Aligned_cols=214 Identities=29% Similarity=0.445 Sum_probs=180.7
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCC----------
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---------- 1288 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---------- 1288 (1446)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 579999999964 46999999999999999999999999999999999999999999999999997653
Q ss_pred ---hHhHhcceEEEeCCCCCCC-CcHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000521 1289 ---VRDLRGRFAVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1360 (1446)
Q Consensus 1289 ---~~~lR~~i~~VpQdp~lF~-gTIR~NLdp~~----~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQ 1360 (1446)
...+|++++++||++.+|+ .|+++|+.... ....++..+ .+.+.++.+|++.........||+||||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~q 153 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEK-----RAMELLDMVGLADKADHMPAQLSGGQQQ 153 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCChhHhhcChhhcCHHHHH
Confidence 2467889999999999886 69999996421 111111111 2234444556666666777789999999
Q ss_pred HHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccch
Q 000521 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1361 rl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
|++||||++++|+++||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.+ ||++++|++|++++.|.+..
T Consensus 154 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T TIGR03005 154 RVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDE 233 (252)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999987643 7899999999999865 89999999999999988776
Q ss_pred hh
Q 000521 1438 YF 1439 (1446)
Q Consensus 1438 ~~ 1439 (1446)
++
T Consensus 234 ~~ 235 (252)
T TIGR03005 234 IF 235 (252)
T ss_pred Hh
Confidence 54
No 220
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.2e-38 Score=347.46 Aligned_cols=204 Identities=52% Similarity=0.902 Sum_probs=181.7
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeCeEEEEcCCCCCCC
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILS 681 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~~i~yv~Q~p~l~~ 681 (1446)
++++|+++.|..... +..++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|+|+|++|+|.+++
T Consensus 1 l~~~~l~~~~~~~~~-~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~ 79 (204)
T cd03250 1 ISVEDASFTWDSGEQ-ETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQN 79 (204)
T ss_pred CEEeEEEEecCCCCc-cccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhcc
Confidence 357899999864210 0024699999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCccccc
Q 000521 682 GTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVD 761 (1446)
Q Consensus 682 ~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD 761 (1446)
.|++||+.++..+++++..++.+.+++...+..+|.|+++..++++.+||||||||++||||++.+|++++|||||++||
T Consensus 80 ~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD 159 (204)
T cd03250 80 GTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVD 159 (204)
T ss_pred CcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCC
Confidence 99999999987777777788888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCE
Q 000521 762 AQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 806 (1446)
Q Consensus 762 ~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 806 (1446)
++..+.+++.++.....+++|+|++||+++.+..||++++|++|+
T Consensus 160 ~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 160 AHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999898887544322234689999999999988899999999984
No 221
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.3e-38 Score=356.47 Aligned_cols=210 Identities=25% Similarity=0.380 Sum_probs=177.3
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHh-HhcceE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRFA 1297 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i~ 1297 (1446)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQ--SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCC--eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 578999999964 36999999999999999999999999999999999999999999999999998877654 467899
Q ss_pred EEeCCCCCCCC-cHHHhcCCCC-CC--ChHH-HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1298 VVPQSPFLFEG-SLRDNLDPFH-MN--DDLK-IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1298 ~VpQdp~lF~g-TIR~NLdp~~-~~--~d~e-i~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
|+||++.+|++ |+++|+.... .. .+++ ..++++..+ +++........+||||||||++||||++++|
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~--------~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP--------VLKEMLGRRGGDLSGGQQQQLAIARALVTRP 150 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH--------hHHHHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999986 9999996431 11 1111 122222221 2344455566689999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
++++|||||++||..+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|.+..+
T Consensus 151 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 151 KLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999987653 7899999999999986 899999999999999887654
No 222
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-38 Score=353.12 Aligned_cols=207 Identities=27% Similarity=0.386 Sum_probs=175.2
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++|
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREP-REVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcCh-HHHhhcEEE
Confidence 578999999964 46999999999999999999999999999999999999999999999999987633 567889999
Q ss_pred EeCCCCCCCC-cHHHhcCCCC---CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000521 1299 VPQSPFLFEG-SLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1446)
Q Consensus 1299 VpQdp~lF~g-TIR~NLdp~~---~~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1370 (1446)
+||++.++++ |+++|+.... ..+ ++++.++++.. |++.........||||||||++||||++.
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qr~~la~al~~ 148 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFV---------GLLEAADRLVKTYSGGMRRRLEIARSLVH 148 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc---------CCHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 9999998875 9999986421 111 22334444444 44433444455799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccch
Q 000521 1371 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
+|++|||||||++||.++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|.+..
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 218 (220)
T cd03265 149 RPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEE 218 (220)
T ss_pred CCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHH
Confidence 9999999999999999999999999987642 7899999999999875 89999999999999887653
No 223
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.3e-38 Score=371.83 Aligned_cols=217 Identities=24% Similarity=0.382 Sum_probs=181.0
Q ss_pred cEEEEEEEEEecCC-----------CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCC
Q 000521 1218 LIEFQNVTMRYKPS-----------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN 1286 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~-----------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~ 1286 (1446)
-++++|++++|+.. ...+++|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 58999999999631 2469999999999999999999999999999999999999999999999999998
Q ss_pred CChHh---HhcceEEEeCCC--CCCC-CcHHHhcCC----CC-CCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCC
Q 000521 1287 TPVRD---LRGRFAVVPQSP--FLFE-GSLRDNLDP----FH-MNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISF 1354 (1446)
Q Consensus 1287 i~~~~---lR~~i~~VpQdp--~lF~-gTIR~NLdp----~~-~~~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~~L 1354 (1446)
++.++ +|++++||+||| .+++ .||++|+.. +. ..+.++..+. ..+.++.+|++ .........|
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~-----~~~~l~~vgl~~~~~~~~p~~L 162 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDR-----VKAMMLKVGLLPNLINRYPHEF 162 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHcCCChHHhcCCcccC
Confidence 87554 678999999999 4774 699999852 11 1233332221 12333444663 2345666789
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEE
Q 000521 1355 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVC 1431 (1446)
Q Consensus 1355 SgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE 1431 (1446)
|||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|
T Consensus 163 SgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive 242 (331)
T PRK15079 163 SGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVE 242 (331)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999987643 7899999999999976 99999999999999
Q ss_pred Eeccchhh
Q 000521 1432 ISFICRYF 1439 (1446)
Q Consensus 1432 ~~~~~~~~ 1439 (1446)
.|.+.+++
T Consensus 243 ~g~~~~i~ 250 (331)
T PRK15079 243 LGTYDEVY 250 (331)
T ss_pred EcCHHHHH
Confidence 99887665
No 224
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-38 Score=361.14 Aligned_cols=215 Identities=24% Similarity=0.377 Sum_probs=179.8
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--C---CCceEEEcCeeCCCC--ChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIINT--PVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~--~---~~G~I~IDG~di~~i--~~~ 1290 (1446)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++... +..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 4899999999964 369999999999999999999999999999999999853 6 499999999999653 345
Q ss_pred hHhcceEEEeCCCCCCCCcHHHhcCCC----CCCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPF----HMND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~gTIR~NLdp~----~~~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
.+|+.++|+||+|.+|+.|+++|+.+. +... ++++.++++.+++.+.+ .+..+....+||+|||||+
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv 157 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEV-----KDRLHDSALGLSGGQQQRV 157 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhH-----HHHHhcCcccCCHHHHHHH
Confidence 678899999999999999999998642 1111 12334445555443211 2344566678999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++++|++|||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|.+.+++
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 158 CIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999999999999887667999999999998865 8999999999999999877653
No 225
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-38 Score=357.06 Aligned_cols=215 Identities=26% Similarity=0.394 Sum_probs=183.2
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHh-Hhcce
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1296 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1296 (1446)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 3889999999963 46999999999999999999999999999999999999999999999999998877644 57889
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCCCC----ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFHMN----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~~~----~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1371 (1446)
+++||++.+|++ |+++|+...... +.++. +....+.++.+|++.........||+|||||++||||++++
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAAN 155 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHcCCHHHhhcchhhCCHHHHHHHHHHHHHhcC
Confidence 999999998885 999999754211 11111 11233455555777766777778999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1372 ~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|++|||||||++||.++.+.+.+.+++.. +++|+|++||+++.+.+ ||+|++|++|++++.|.+.+++
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 225 (241)
T PRK10895 156 PKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEIL 225 (241)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHh
Confidence 99999999999999999999999887653 48899999999987754 8999999999999999988664
No 226
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-38 Score=361.98 Aligned_cols=215 Identities=27% Similarity=0.410 Sum_probs=181.5
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCC-hHhHhcceE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDLRGRFA 1297 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~~lR~~i~ 1297 (1446)
++++|++++|+++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 7899999999633 45999999999999999999999999999999999999999999999999998765 467788999
Q ss_pred EEeCCCC--CCCCcHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1298 VVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1298 ~VpQdp~--lF~gTIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
|+||+|. +++.|+++|+.+... .+.++..+. +.+.++.+|++.........||+|||||++||||++++|
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKR-----VDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEP 155 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCC
Confidence 9999985 567899999975421 122221111 122333446665566666789999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||||||++||+.+...+.+.+++.. +++|+|++||+++.+..||+|++|++|++++.|.+..++
T Consensus 156 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 223 (274)
T PRK13644 156 ECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVL 223 (274)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999998754 489999999999999889999999999999999887654
No 227
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-38 Score=359.33 Aligned_cols=217 Identities=23% Similarity=0.354 Sum_probs=180.7
Q ss_pred CccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--C---CCceEEEcCeeCCCC--C
Q 000521 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIINT--P 1288 (1446)
Q Consensus 1216 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~--~---~~G~I~IDG~di~~i--~ 1288 (1446)
+|.|+++|++++|+. .++|+|+||+|++||.+||+|++|||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 467999999999963 469999999999999999999999999999999999986 3 589999999999754 3
Q ss_pred hHhHhcceEEEeCCCCCCC-CcHHHhcCCC----CCCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHH
Q 000521 1289 VRDLRGRFAVVPQSPFLFE-GSLRDNLDPF----HMNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQR 1359 (1446)
Q Consensus 1289 ~~~lR~~i~~VpQdp~lF~-gTIR~NLdp~----~~~~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQr 1359 (1446)
...+|++++|+||++.+|. .|+++|+... +..+. +++.++++.+++.+.+ +...+....+||+|||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~ 154 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEV-----KDRLKSNAMELSGGQQ 154 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hHHhhCCcCcCCHHHH
Confidence 4567899999999999998 5999999642 11111 2233344444432211 1234455678999999
Q ss_pred HHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1360 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1360 Qrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
||++||||++++|++|||||||++||..+.+.+.+.|++..+++|||+|||+++.+.. ||+|++|++|++++.|++..+
T Consensus 155 qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14256 155 QRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKI 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999999865 999999999999999988765
Q ss_pred h
Q 000521 1439 F 1439 (1446)
Q Consensus 1439 ~ 1439 (1446)
+
T Consensus 235 ~ 235 (252)
T PRK14256 235 F 235 (252)
T ss_pred H
Confidence 3
No 228
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-38 Score=352.09 Aligned_cols=204 Identities=26% Similarity=0.423 Sum_probs=172.9
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++|++++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 578999999963 469999999999999999999999999999999999999999999999998753 56789999
Q ss_pred EeCCCCCCCC-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1299 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1299 VpQdp~lF~g-TIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+||++.+|++ |+++|+..... .+..+. ...+.+.++.+|++........+||+|||||++||||++++|++
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~ 149 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEA-----RRRIDEWLERLELSEYANKRVEELSKGNQQKVQFIAAVIHDPEL 149 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHH-----HHHHHHHHHHcCChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999886 99999864321 111111 11233444555776666666778999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEe
Q 000521 1375 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~ 1433 (1446)
+||||||++||+++.+.+.+.|++.. +++|+|+|+|+++.+.. ||+|++|++|++++.|
T Consensus 150 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 150 LILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999998754 47899999999999865 8999999999998864
No 229
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-38 Score=361.97 Aligned_cols=203 Identities=32% Similarity=0.412 Sum_probs=174.5
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------e
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 669 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------~ 669 (1446)
.++++|++..|... . +++|+||+|++||+++++|||||||||||++|.|+.+|++|+|.++| .
T Consensus 3 ~i~l~~v~K~yg~~-----~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~ 76 (338)
T COG3839 3 ELELKNVRKSFGSF-----E-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRG 76 (338)
T ss_pred EEEEeeeEEEcCCc-----e-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCC
Confidence 47899999998632 1 59999999999999999999999999999999999999999999987 5
Q ss_pred EEEEcCCCCCCCc-cHHHHHhcCCCCC-------hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000521 670 IAYVPQVPWILSG-TIRDNILFGKNYD-------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1446)
Q Consensus 670 i~yv~Q~p~l~~~-ti~~nI~~g~~~~-------~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lA 741 (1446)
||+|+|+.-|++. ||+|||.||.... +++.+++.+..++++.++..| ..||||||||||||
T Consensus 77 iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAla 145 (338)
T COG3839 77 IAMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALA 145 (338)
T ss_pred EEEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHH
Confidence 9999999999976 9999999986542 457778888888887766544 58999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-hCCEEEEEeCCEEEEecChhHHHhcc
Q 000521 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVSL 820 (1446)
Q Consensus 742 Raly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~~ 820 (1446)
||+.++|+++|||||+|+||++....+-..+..-....+.|+|.||||..+.. .||+|++|++|+|.+.|++.|+....
T Consensus 146 RAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 146 RALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 99999999999999999999998887766532211223579999999987754 59999999999999999999997543
No 230
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-38 Score=375.35 Aligned_cols=213 Identities=27% Similarity=0.371 Sum_probs=179.8
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 4899999999964 3699999999999999999999999999999999999999999999999999877653 57899
Q ss_pred EEeCCCCCCCC-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1298 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1298 ~VpQdp~lF~g-TIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
||||++.+|+. |+++|+.+... .+.++..+ ...+.++.+|++........+||||||||++|||||+++|+
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~ 153 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ-----RVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPS 153 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999975 99999975321 22222111 12233334456555555666899999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1374 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||||||+||.++.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|..++
T Consensus 154 lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~ 222 (369)
T PRK11000 154 VFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELY 222 (369)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999987643 7899999999998765 8999999999999999988765
No 231
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=8.5e-38 Score=349.72 Aligned_cols=207 Identities=27% Similarity=0.375 Sum_probs=172.5
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHh---Hhcc
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LRGR 1295 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR~~ 1295 (1446)
|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++... +|++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999532 46999999999999999999999999999999999999999999999999998876543 6889
Q ss_pred eEEEeCCCCCC-CCcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000521 1296 FAVVPQSPFLF-EGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1446)
Q Consensus 1296 i~~VpQdp~lF-~gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1371 (1446)
++|+||+|.+| ..|+++|+.... ..++++..+. ..+.++.+|++........+||+|||||++||||++++
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRR-----VSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNK 155 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHH-----HHHHHHHcCChhhhhCCchhCCHHHHHHHHHHHHHHcC
Confidence 99999999875 569999997531 1222222211 12223333555445556678999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEE
Q 000521 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVC 1431 (1446)
Q Consensus 1372 ~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE 1431 (1446)
|++|||||||++||.++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 156 PAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999998763 47899999999999976 89999999999863
No 232
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-38 Score=355.00 Aligned_cols=215 Identities=24% Similarity=0.374 Sum_probs=178.9
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHh-Hhcce
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1296 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1296 (1446)
.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+... .|+++
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 4899999999963 46999999999999999999999999999999999999999999999999998887654 67889
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
+|+||++.+|++ |+++|+..... .+.++..+.+ .+.++.+ +++.........||+|||||++||||++++|+
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQPR 157 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHHHHHHHHhCchhhCCHHHHHHHHHHHHHHhCCC
Confidence 999999999985 99999965321 1222222111 1222222 23333344556799999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhh
Q 000521 1374 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||||||++||.++.+.+.+.|++.. +++|+|++||+++.+. .||||++|++|++++.|++..++
T Consensus 158 illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 225 (237)
T PRK11614 158 LLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALL 225 (237)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHh
Confidence 999999999999999999999998754 4899999999999775 48999999999999999987664
No 233
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-38 Score=361.39 Aligned_cols=218 Identities=28% Similarity=0.368 Sum_probs=183.8
Q ss_pred CCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCCC--C
Q 000521 1215 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--T 1287 (1446)
Q Consensus 1215 ~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i 1287 (1446)
..+.++++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.|+.. .
T Consensus 22 ~~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 22 EQTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CCcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 3457999999999964 3699999999999999999999999999999999999884 89999999999975 3
Q ss_pred ChHhHhcceEEEeCCCCCCCCcHHHhcCCCC---C-CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHH
Q 000521 1288 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---M-ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQR 1359 (1446)
Q Consensus 1288 ~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~---~-~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQr 1359 (1446)
+...+|++++|+||++.+|++|+++|+.+.. . .. ++++.++++.+++.+.+ .+..+..+.+||+|||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~Gq~ 174 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEV-----KDRLHENAFGLSGGQQ 174 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhH-----HHHhhCCcccCCHHHH
Confidence 4567899999999999999999999996431 1 11 12344455554443322 1345566778999999
Q ss_pred HHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1360 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1360 Qrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
||++||||++++|+|+||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|.+.++
T Consensus 175 qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 254 (272)
T PRK14236 175 QRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTL 254 (272)
T ss_pred HHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHH
Confidence 9999999999999999999999999999999999999987678999999999999865 899999999999999887765
Q ss_pred h
Q 000521 1439 F 1439 (1446)
Q Consensus 1439 ~ 1439 (1446)
+
T Consensus 255 ~ 255 (272)
T PRK14236 255 F 255 (272)
T ss_pred h
Confidence 3
No 234
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=6.4e-38 Score=349.75 Aligned_cols=209 Identities=25% Similarity=0.383 Sum_probs=183.0
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh----HhHhc
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV----RDLRG 1294 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~----~~lR~ 1294 (1446)
+.+.|+.++|+++ .++++|+||+|++||.++|+|++|||||||+++|.|+++|++|+|.+||.++...+. ...|+
T Consensus 1 ~~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 1 VQVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred CeeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 3578999999755 569999999999999999999999999999999999999999999999999876542 34567
Q ss_pred ceEEEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1295 RFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1295 ~i~~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
.++|+||+|.+|+.|+++|+......++++.+++++.+++.+.++.+ |+++.++....+||+|||||++||||++++|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 89999999999999999999876545566677888888888777665 7888888888899999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHH--HHHHhc-CCcEEEEeccCchhHhhcCEEEEEeCCE
Q 000521 1373 KVLCLDECTANVDAQTASILQN--AISSEC-KGMTVITIAHRISTVLNMDEILILDHGH 1428 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~--~I~~~~-~~~TvI~IaHrl~ti~~~DrIlvl~~G~ 1428 (1446)
++|||||||++||.++.+.+.+ .++... .+.|+|++||+.+.+..||++++|++|.
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 9999999999999999887776 444332 3689999999999999999999999984
No 235
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-38 Score=358.41 Aligned_cols=215 Identities=28% Similarity=0.402 Sum_probs=181.6
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCCCC--ChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1290 (1446)
.++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 5899999999963 4699999999999999999999999999999999999875 799999999999753 345
Q ss_pred hHhcceEEEeCCCCCCCCcHHHhcCCCCC---C-Ch----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~gTIR~NLdp~~~---~-~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
.+|++++|+||++.+|+.|+++|+.+... . +. +++.++++.+++.+.+ ..........||+|||||+
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv 156 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEV-----KDDLKKSALKLSGGQQQRL 156 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhh-----hhHhhCCcccCCHHHHHHH
Confidence 67889999999999999999999974321 1 11 2334455555443221 2234556678999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++++|+||||||||++||..+.+.+.+.|++..++.|+|+|||+++.+.. ||||++|++|++++.|.+...+
T Consensus 157 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 157 CIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 9999999999999999999999999999999999987667999999999999876 8999999999999999887654
No 236
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7e-38 Score=371.98 Aligned_cols=214 Identities=24% Similarity=0.396 Sum_probs=181.6
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
..++++|++++|.. .++|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++...+.+ ++++
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 35999999999964 4699999999999999999999999999999999999999999999999999887764 5789
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
++|+|++.+|+. |+++|+.+.-. .++.++.+ .+.+.++.+|++.........||||||||++|||||+++|
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P 163 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITP-----RVMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKP 163 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999976 99999975321 22222211 1122333335555556666789999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+|.+++
T Consensus 164 ~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~ 233 (375)
T PRK09452 164 KVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIY 233 (375)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999987653 7899999999998764 9999999999999999988765
No 237
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-38 Score=361.59 Aligned_cols=212 Identities=27% Similarity=0.418 Sum_probs=181.5
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++|++++|+.. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 3 ~l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 3 LIETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred eEEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 37899999999633 35999999999999999999999999999999999999999999999999998878888899999
Q ss_pred EEeCCC--CCCCCcHHHhcCCCC---CCChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000521 1298 VVPQSP--FLFEGSLRDNLDPFH---MNDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1446)
Q Consensus 1298 ~VpQdp--~lF~gTIR~NLdp~~---~~~d~----ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1368 (1446)
|+||+| .+|+.|+++|+.... ..+.+ ++.++++.+ |+..........||+|||||++|||||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~Gq~qrl~laraL 152 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHML---------GLEELRDRVPHHLSGGEKKRVAIAGVI 152 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHC---------CChhHhcCCcccCCHHHHHHHHHHHHH
Confidence 999998 477889999996422 12222 233344444 444444555668999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhh
Q 000521 1369 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+.+|++|||||||++||..+.+.+.+.+++..+ ++|||++||+++.+. .||||++|++|++++.|.+..++
T Consensus 153 ~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 226 (277)
T PRK13652 153 AMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIF 226 (277)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHh
Confidence 999999999999999999999999999987643 789999999999985 58999999999999999887664
No 238
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-38 Score=359.75 Aligned_cols=215 Identities=25% Similarity=0.364 Sum_probs=180.5
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--C---CCceEEEcCeeCCC--CChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIIN--TPVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~--~---~~G~I~IDG~di~~--i~~~ 1290 (1446)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQ--HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECC--eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 5899999999964 369999999999999999999999999999999999987 3 58999999999864 4556
Q ss_pred hHhcceEEEeCCCCCCCCcHHHhcCCCCC----CChHH----HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~gTIR~NLdp~~~----~~d~e----i~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
.+|++++|+||+|.+|++|+++|+.+... .++++ +.++++..++.+.+ .........+||+|||||+
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~l~~~~~~LS~Gq~qrv 164 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEV-----KDRLHTQALSLSGGQQQRL 164 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hhhhhCCcccCCHHHHHHH
Confidence 78899999999999999999999964321 12222 23334443332211 2334556678999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++++|+||+|||||++||.++...+.+.|++..+++|+|+|||+++.+.+ ||||++|++|++++.|++..++
T Consensus 165 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 165 CIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 9999999999999999999999999999999999987668999999999999865 8999999999999999988764
No 239
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.9e-38 Score=351.64 Aligned_cols=200 Identities=30% Similarity=0.402 Sum_probs=170.0
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChH---hHhcc
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1295 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~~ 1295 (1446)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+..++.. .+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 7899999999532 4699999999999999999999999999999999999999999999999999887643 46789
Q ss_pred eEEEeCCCCCCC-CcHHHhcCCCC---CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000521 1296 FAVVPQSPFLFE-GSLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1446)
Q Consensus 1296 i~~VpQdp~lF~-gTIR~NLdp~~---~~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1446)
++|+||+|.+|. .|+++|+.... ... +++++++++..+ ++........+||||||||++||||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~---------l~~~~~~~~~~LS~G~~qrl~la~a 151 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVG---------LEHKADAFPEQLSGGEQQRVAIARA 151 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC---------ChhhhhCChhhCCHHHHHHHHHHHH
Confidence 999999999986 59999986431 111 233444455444 4433344445799999999999999
Q ss_pred hccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCE
Q 000521 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGH 1428 (1446)
Q Consensus 1368 LLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~ 1428 (1446)
|+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|+
T Consensus 152 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 152 IVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999998764 48999999999999986 89999999985
No 240
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-38 Score=357.71 Aligned_cols=216 Identities=27% Similarity=0.372 Sum_probs=182.2
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC-----CceEEEcCeeCCCC--Ch
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIINT--PV 1289 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~i--~~ 1289 (1446)
+.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +.
T Consensus 3 ~~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 3 PKIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred ceEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 35899999999963 46999999999999999999999999999999999999987 69999999998653 45
Q ss_pred HhHhcceEEEeCCCCCCCCcHHHhcCCCCC----CCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000521 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1446)
Q Consensus 1290 ~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~----~~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1446)
..+|++++|+||+|.+|+.|+++|+.+... ... +.+.++++..++++.+ ....+..+.+||+|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LS~Gq~qr 155 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEV-----KDNLHKSGLALSGGQQQR 155 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhh-----hhHhhCCcccCCHHHHHH
Confidence 678899999999999999999999975321 111 2233344444443322 233556677899999999
Q ss_pred HHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1362 l~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++||||++++|++|||||||++||.++...+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|.+.+++
T Consensus 156 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 156 LCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 99999999999999999999999999999999999877567999999999999877 6999999999999998886543
No 241
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-38 Score=355.35 Aligned_cols=202 Identities=27% Similarity=0.364 Sum_probs=173.7
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
-.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 11 ~~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 11 TPLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred CcEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 35999999999964 46999999999999999999999999999999999999999999999998763 467899
Q ss_pred EEEeCCCCCCC-CcHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1297 AVVPQSPFLFE-GSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1297 ~~VpQdp~lF~-gTIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+|+||+|.+|+ .|+++|+.+... ..++++.++++.. |++........+||||||||++|||||+++|++
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~---------gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~l 154 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAV---------GLADRANEWPAALSGGQKQRVALARALIHRPGL 154 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHc---------CChhHhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999987 599999975321 1233344444444 555555566678999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEec
Q 000521 1375 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISF 1434 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~ 1434 (1446)
|||||||++||..+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.+.
T Consensus 155 llLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~ 217 (257)
T PRK11247 155 LLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLT 217 (257)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecc
Confidence 99999999999999999999998753 37899999999998865 89999999999998765
No 242
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-38 Score=348.07 Aligned_cols=200 Identities=24% Similarity=0.369 Sum_probs=170.0
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|+++|++++|++. . .|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5799999999642 2 39999999999999999999999999999999999999999999999987654 4678999
Q ss_pred EeCCCCCCCC-cHHHhcCCCCCC-------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000521 1299 VPQSPFLFEG-SLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1446)
Q Consensus 1299 VpQdp~lF~g-TIR~NLdp~~~~-------~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1370 (1446)
+||+|.+|++ |+++|+.+.... +++++.++++.++ ++.........||+|||||++||||+++
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~---------l~~~~~~~~~~LS~G~~qrv~ia~al~~ 145 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVG---------LAGLEKRLPGELSGGERQRVALARVLVR 145 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcC---------CHHHHhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999986 999999743211 1233444555544 4444444556899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEe
Q 000521 1371 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~ 1433 (1446)
+|++|||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 146 DKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999998764 37899999999999876 8999999999998764
No 243
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=6.3e-38 Score=352.38 Aligned_cols=206 Identities=24% Similarity=0.306 Sum_probs=174.4
Q ss_pred cEEEEEEEEEecCCC--CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHh---H
Q 000521 1218 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---L 1292 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---l 1292 (1446)
.|+++|++++|++.. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 599999999997532 25999999999999999999999999999999999999999999999999998877654 2
Q ss_pred -hcceEEEeCCCCCCCC-cHHHhcCCC---CCCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000521 1293 -RGRFAVVPQSPFLFEG-SLRDNLDPF---HMNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1363 (1446)
Q Consensus 1293 -R~~i~~VpQdp~lF~g-TIR~NLdp~---~~~~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1363 (1446)
+++++++||+|.+|++ |+++|+.+. ...+. +++.++++.. |++.........||+|||||++
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~Ge~qrl~ 156 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQL---------GLGKRLDHLPAQLSGGEQQRVA 156 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc---------CCHhHhhCChhhCCHHHHHHHH
Confidence 3679999999999885 999998642 11111 2233344444 5544444555689999999999
Q ss_pred HHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhhcCEEEEEeCCEEEEE
Q 000521 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVCI 1432 (1446)
Q Consensus 1364 LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~ 1432 (1446)
|||||+++|++|||||||++||.++.+.+.+.|++.. .++|||+|+|+++.+..||+|++|++|+++|.
T Consensus 157 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 157 LARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999998763 27899999999999988999999999999874
No 244
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=6.1e-38 Score=374.23 Aligned_cols=210 Identities=26% Similarity=0.382 Sum_probs=183.7
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++|++++|+. .++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.+++..++|++++
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999964 47999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCC-CCCcHHHhcCCCCC-----C------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000521 1298 VVPQSPFL-FEGSLRDNLDPFHM-----N------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1365 (1446)
Q Consensus 1298 ~VpQdp~l-F~gTIR~NLdp~~~-----~------~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1365 (1446)
++||++.+ |+.|+++|+..+.. . +++++.++++.+++.+. ......+||||||||++||
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~---------~~~~~~~LSgGerQRv~IA 151 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQF---------ADRPVTSLSGGERQRVLLA 151 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchh---------hcCChhhCCHHHHHHHHHH
Confidence 99999987 57799999965321 1 12345556666655433 3344557999999999999
Q ss_pred HHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchh
Q 000521 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
|||+++|+||+|||||++||..+...+.+.|++.. +++|||+++|+++.+. .||||++|++|++++.|+|..+
T Consensus 152 rAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev 226 (402)
T PRK09536 152 RALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADV 226 (402)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999999999998764 4789999999999995 5999999999999999999864
No 245
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-38 Score=359.89 Aligned_cols=217 Identities=25% Similarity=0.358 Sum_probs=182.2
Q ss_pred CccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCceEEEcCeeCCC--CC
Q 000521 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TP 1288 (1446)
Q Consensus 1216 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~ 1288 (1446)
.-.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 22 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 22 KVVFDTQNLNLWYGE--DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred ceEEEEeeeEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 336999999999964 369999999999999999999999999999999999987 699999999999853 45
Q ss_pred hHhHhcceEEEeCCCCCCCCcHHHhcCCC---CCCChH-----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000521 1289 VRDLRGRFAVVPQSPFLFEGSLRDNLDPF---HMNDDL-----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1360 (1446)
Q Consensus 1289 ~~~lR~~i~~VpQdp~lF~gTIR~NLdp~---~~~~d~-----ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQ 1360 (1446)
...+|++++|+||+|.+|..|+++|+.+. ...+++ .+.++++..++.+ +++......+..|||||||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~l~~~~~~~~~~LSgGe~q 174 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWD-----ELKDRLHDNAYGLSGGQQQ 174 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-----hHHHHHhcCcccCCHHHHH
Confidence 56788999999999999999999999742 112221 1233333333221 2334456667789999999
Q ss_pred HHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1361 rl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|++|||||+++|+||||||||++||..+.+.+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|.+..++
T Consensus 175 rv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 254 (271)
T PRK14238 175 RLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIF 254 (271)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999887678999999999999875 8999999999999998887553
No 246
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-38 Score=362.91 Aligned_cols=217 Identities=28% Similarity=0.444 Sum_probs=180.8
Q ss_pred cEEEEEEEEEecCCC---CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCC----ChH
Q 000521 1218 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~ 1290 (1446)
.|+++|++++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997422 4699999999999999999999999999999999999999999999999999753 345
Q ss_pred hHhcceEEEeCCC--CCCCCcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHH
Q 000521 1291 DLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICL 1364 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp--~lF~gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~L 1364 (1446)
..|++++|+||+| .+|+.|+++|+.+.. ..+.++..+ ...+.++.+|++. .......+||+|||||++|
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~l 156 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKVGLSEDLISKSPFELSGGQMRRVAI 156 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCChhHhhCCcccCCHHHHHHHHH
Confidence 6788999999998 577889999996321 122222211 1223444457763 4456667899999999999
Q ss_pred HHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhh
Q 000521 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1365 ARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|||++++|++|||||||++||.++.+.+.+.|++.. ++.|||++||+++.+. -||+|++|++|++++.|++..++
T Consensus 157 aral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 157 AGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIF 233 (287)
T ss_pred HHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999998764 4789999999999986 59999999999999999887653
No 247
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.9e-38 Score=339.15 Aligned_cols=195 Identities=28% Similarity=0.369 Sum_probs=160.5
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|++-.|...... ..+|+++||+|++||+++|+|||||||||||++|.|...|++|.|.++|
T Consensus 2 i~~~~v~k~y~~~~~~--~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~ 79 (226)
T COG1136 2 IELKNVSKIYGLGGEK--VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAK 79 (226)
T ss_pred cEEeeeEEEeccCCcc--eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHH
Confidence 3567777777654321 4579999999999999999999999999999999999999999999987
Q ss_pred ----eEEEEcCCCCCCCc-cHHHHHhcC----CCCC---hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHH
Q 000521 669 ----SIAYVPQVPWILSG-TIRDNILFG----KNYD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 736 (1446)
Q Consensus 669 ----~i~yv~Q~p~l~~~-ti~~nI~~g----~~~~---~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkq 736 (1446)
+||||+|+..|.+. |++|||.+. .... .++.++.++..+|.+... .....+|||||||
T Consensus 80 ~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQ 149 (226)
T COG1136 80 LRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQ 149 (226)
T ss_pred HHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHH
Confidence 49999999987765 999999853 2221 345556666666654432 2345689999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEE
Q 000521 737 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1446)
Q Consensus 737 Ri~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1446)
||||||||+.+|++++.||||.+||.++++.|++.+......+|+|+|+|||+......|||++.|+||++.
T Consensus 150 RVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 150 RVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 999999999999999999999999999999999863322134578999999999999999999999999954
No 248
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-38 Score=354.05 Aligned_cols=213 Identities=24% Similarity=0.357 Sum_probs=180.2
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCC------CCChHh
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII------NTPVRD 1291 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~------~i~~~~ 1291 (1446)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 2 SIQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 3789999999964 36999999999999999999999999999999999999999999999999974 123456
Q ss_pred HhcceEEEeCCCCCCCC-cHHHhcCCC--C--CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000521 1292 LRGRFAVVPQSPFLFEG-SLRDNLDPF--H--MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1366 (1446)
Q Consensus 1292 lR~~i~~VpQdp~lF~g-TIR~NLdp~--~--~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1366 (1446)
+|++++|+||+|.+|++ |+++|+..+ . ....++.. ....+.++.+|++........+||||||||++|||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~lar 154 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERLRLKPYADRFPLHLSGGQQQRVAIAR 154 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHH
Confidence 78899999999999976 999999631 1 11222211 12344455557776677777789999999999999
Q ss_pred HhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccch
Q 000521 1367 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1367 ALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
|++++|+++||||||++||.++.+.+.+.|++.. +++|+|++||+++.+.+ ||+|++|++|++++.|.+..
T Consensus 155 al~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 227 (242)
T PRK11124 155 ALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASC 227 (242)
T ss_pred HHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999998764 47999999999999865 89999999999999988764
No 249
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.3e-38 Score=318.91 Aligned_cols=199 Identities=29% Similarity=0.391 Sum_probs=170.7
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------eE
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 670 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------~i 670 (1446)
+.++++.|+|... + =..+++|++||+++|+|||||||||||++|.|+..|.+|+|.++| .+
T Consensus 2 l~L~~V~~~y~~~---~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPV 73 (231)
T COG3840 2 LALDDVRFSYGHL---P-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPV 73 (231)
T ss_pred ccccceEEeeCcc---e-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCCh
Confidence 3456788888532 2 246799999999999999999999999999999999999999987 49
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCC-------CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHH
Q 000521 671 AYVPQVPWILSG-TIRDNILFGKN-------YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 742 (1446)
Q Consensus 671 ~yv~Q~p~l~~~-ti~~nI~~g~~-------~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lAR 742 (1446)
+.++|+..||.- ||++||-+|.. .+.++.+.+....+|....+.+|. +|||||||||||||
T Consensus 74 SmlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALAR 142 (231)
T COG3840 74 SMLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALAR 142 (231)
T ss_pred hhhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHH
Confidence 999999999976 99999999853 245677888888899888888885 79999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHHhc
Q 000521 743 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVS 819 (1446)
Q Consensus 743 aly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1446)
++.++.+|++||||||||||.-+......+..-...++.|++||||+++.+.. +|+++++++|+|.++|+.+++...
T Consensus 143 clvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 143 CLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 99999999999999999999988877664221113456799999999998765 999999999999999999887643
No 250
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=4e-38 Score=362.09 Aligned_cols=215 Identities=26% Similarity=0.314 Sum_probs=179.5
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChH---hHhc
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRG 1294 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~ 1294 (1446)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 5899999999953 4699999999999999999999999999999999999999999999999999876643 4578
Q ss_pred ceEEEeCCCCCCCC-cHHHhcCCC----CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000521 1295 RFAVVPQSPFLFEG-SLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1446)
Q Consensus 1295 ~i~~VpQdp~lF~g-TIR~NLdp~----~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1369 (1446)
+++|+||++.+|++ |+++|+.+. ...+.++..+ ...+.++.+|++........+||||||||++||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~ 159 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHS-----TVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA 159 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHH-----HHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHh
Confidence 89999999999986 999998642 1112111111 1222333446655555556689999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1370 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++|++|||||||++||.++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 160 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 160 LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999998764 27899999999999876 8999999999999998876543
No 251
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-38 Score=360.37 Aligned_cols=220 Identities=22% Similarity=0.321 Sum_probs=187.7
Q ss_pred CCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCC--
Q 000521 1213 WPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII-- 1285 (1446)
Q Consensus 1213 wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~-- 1285 (1446)
-|.++.|+++|++++|+. +++|+|+||+|++||++||+|++|||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 11 ~~~~~~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~ 88 (265)
T PRK14252 11 SPTQQKSEVNKLNFYYGG--YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNIL 88 (265)
T ss_pred cCCCceEEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccc
Confidence 456788999999999964 3699999999999999999999999999999999999875 7999999998874
Q ss_pred --CCChHhHhcceEEEeCCCCCCCCcHHHhcCCCC---C-----CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCC
Q 000521 1286 --NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---M-----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFS 1355 (1446)
Q Consensus 1286 --~i~~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~---~-----~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LS 1355 (1446)
......+|++++|+||+|.+|.+|+++|+.... . ..++++.++++.+++.+ ++....+.....||
T Consensus 89 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~l~~~~~~~~~~LS 163 (265)
T PRK14252 89 SPEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-----EVKDRLGDLAFNLS 163 (265)
T ss_pred ccccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-----hhhHHHhCCcccCC
Confidence 334567889999999999999999999996431 1 11345566666665543 22344556667899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEec
Q 000521 1356 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISF 1434 (1446)
Q Consensus 1356 gGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~ 1434 (1446)
+|||||++||||++++|++++|||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|.
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999887667899999999999965 89999999999999999
Q ss_pred cchhh
Q 000521 1435 ICRYF 1439 (1446)
Q Consensus 1435 ~~~~~ 1439 (1446)
+.+++
T Consensus 244 ~~~~~ 248 (265)
T PRK14252 244 TDTIF 248 (265)
T ss_pred HHHHH
Confidence 87765
No 252
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-38 Score=359.16 Aligned_cols=214 Identities=26% Similarity=0.396 Sum_probs=178.6
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCceEEEcCeeCCCCC--hHh
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINTP--VRD 1291 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~i~--~~~ 1291 (1446)
-+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999963 469999999999999999999999999999999999986 47999999999987653 346
Q ss_pred HhcceEEEeCCCCCCCCcHHHhcCCCC---CC--C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1292 LRGRFAVVPQSPFLFEGSLRDNLDPFH---MN--D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1292 lR~~i~~VpQdp~lF~gTIR~NLdp~~---~~--~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
+|++++|+||++.+|++|+++|+.+.. .. . ++++.++++..++.+. +.+.++..+.+||+|||||+
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~Gq~qrv 158 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEE-----LGDRLKDSAFELSGGQQQRL 158 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCch-----hhhHhhcChhhCCHHHHHHH
Confidence 788999999999999999999986431 11 1 1223344444433221 11244556678999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++++|+||||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 159 CIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999887678999999999999875 8999999999999999887654
No 253
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-38 Score=358.19 Aligned_cols=210 Identities=24% Similarity=0.369 Sum_probs=181.4
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999964 469999999999999999999999999999999999999999999999999988888888899999
Q ss_pred EeCCCCCCCC-cHHHhcCCCCC--------CC---hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000521 1299 VPQSPFLFEG-SLRDNLDPFHM--------ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1366 (1446)
Q Consensus 1299 VpQdp~lF~g-TIR~NLdp~~~--------~~---d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1366 (1446)
+||++.++.+ |+++|+++... .. ++++.++++.+ |++.........||||||||++|||
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~lar 151 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQT---------RINHLADRRLTDLSGGQRQRAFLAM 151 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHc---------CCHHHHcCCcccCCHHHHHHHHHHH
Confidence 9999998877 99999975311 01 12233333333 5554455566789999999999999
Q ss_pred HhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1367 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1367 ALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|++++|++|||||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 152 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 226 (255)
T PRK11231 152 VLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVM 226 (255)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhc
Confidence 9999999999999999999999999999998764 47899999999999865 8999999999999998877653
No 254
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=7.3e-38 Score=348.19 Aligned_cols=204 Identities=26% Similarity=0.416 Sum_probs=172.9
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCC--CChHhHhcce
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--TPVRDLRGRF 1296 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~--i~~~~lR~~i 1296 (1446)
++++||+++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 478999999964 469999999999999999999999999999999999999999999999999853 4556788999
Q ss_pred EEEeCCCCCCC-CcHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000521 1297 AVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1446)
Q Consensus 1297 ~~VpQdp~lF~-gTIR~NLdp~~----~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1371 (1446)
+|+||+|.+|+ .|+++|+.... ..+.++..+ ...+.++.+|++........+||+|||||++||||++++
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 153 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEE-----RALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMN 153 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHcCCHhHhhhCccccCHHHHHHHHHHHHHhcC
Confidence 99999999887 59999996532 122222111 123344445676666666778999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEE
Q 000521 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1429 (1446)
Q Consensus 1372 ~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~v 1429 (1446)
|++|||||||++||+++.+.+.+.|++.. .++|+|++||+++.+.+ ||+|++|++|++
T Consensus 154 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 154 PKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999998764 47899999999999975 999999999975
No 255
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-38 Score=361.13 Aligned_cols=213 Identities=26% Similarity=0.390 Sum_probs=181.4
Q ss_pred cEEEEEEEEEecCC----CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCC-hHhH
Q 000521 1218 LIEFQNVTMRYKPS----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDL 1292 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~----~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~~l 1292 (1446)
.++++|++++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 58999999999643 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hcceEEEeCCCC--CCCCcHHHhcCCCCC---CCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000521 1293 RGRFAVVPQSPF--LFEGSLRDNLDPFHM---NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1363 (1446)
Q Consensus 1293 R~~i~~VpQdp~--lF~gTIR~NLdp~~~---~~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1363 (1446)
|++++|+||+|. +|..|+++|+.+... .+. +++.++++.+ |++.........||+|||||++
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~---------gL~~~~~~~~~~LS~G~~qrv~ 154 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKV---------GMYEYRRHAPHLLSGGQKQRVA 154 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHC---------CCHhHhhCCcccCCHHHHHHHH
Confidence 899999999984 676789999965321 122 2334444444 5544455556689999999999
Q ss_pred HHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1364 LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||++++|++|||||||++||..+.+.+.+.|++.. .++|||+|||+++.+..||+|++|++|++++.|.+..++
T Consensus 155 laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 155 IAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999999999998764 389999999999999889999999999999999887654
No 256
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-38 Score=359.68 Aligned_cols=216 Identities=25% Similarity=0.360 Sum_probs=182.8
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCCC--CCh
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1289 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~ 1289 (1446)
+.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 46999999999964 3699999999999999999999999999999999999985 48999999999864 445
Q ss_pred HhHhcceEEEeCCCCCCCCcHHHhcCCCC----CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000521 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1446)
Q Consensus 1290 ~~lR~~i~~VpQdp~lF~gTIR~NLdp~~----~~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1446)
..+|++++|+||+|.+|+.|+++|+.+.. ... ++.+.++++.+++.+.+ ....+.....||+|||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LS~G~~qr 158 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEV-----KDKLNKSALGLSGGQQQR 158 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-----hhHhcCCcccCCHHHHHH
Confidence 67888999999999999999999996421 112 12344556666554322 223345566899999999
Q ss_pred HHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEe-----CCEEEEEecc
Q 000521 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD-----HGHLVCISFI 1435 (1446)
Q Consensus 1362 l~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~-----~G~vvE~~~~ 1435 (1446)
++||||++++|++|+|||||++||..+.+.+.+.|++..+++|+|+|||+++.+.+ ||++++|+ +|++++.|.+
T Consensus 159 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 159 LCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFGVT 238 (259)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeCCH
Confidence 99999999999999999999999999999999999987667999999999999876 89999998 5999999998
Q ss_pred chhh
Q 000521 1436 CRYF 1439 (1446)
Q Consensus 1436 ~~~~ 1439 (1446)
..++
T Consensus 239 ~~~~ 242 (259)
T PRK14260 239 TQIF 242 (259)
T ss_pred HHHh
Confidence 8764
No 257
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=365.22 Aligned_cols=217 Identities=25% Similarity=0.377 Sum_probs=178.2
Q ss_pred cEEEEEEEEEecCC--------CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh
Q 000521 1218 LIEFQNVTMRYKPS--------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV 1289 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~--------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~ 1289 (1446)
.|+++|++++|+.. ...+|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 48999999999631 2469999999999999999999999999999999999999999999999999988875
Q ss_pred H---hHhcceEEEeCCCC--CCCC-cHHHhcCC----CCCCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhH
Q 000521 1290 R---DLRGRFAVVPQSPF--LFEG-SLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQ 1358 (1446)
Q Consensus 1290 ~---~lR~~i~~VpQdp~--lF~g-TIR~NLdp----~~~~~d~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G~~LSgGQ 1358 (1446)
. .+|+++++|||||. +++. |+.+|+.. .......+. +....+.++.+|++. ........|||||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~gL~~~~~~~~p~~LSgGq 159 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAER-----REKALAMMAKVGLRPEHYDRYPHMFSGGQ 159 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHH-----HHHHHHHHHHCCCChHHhcCCCccCCHHH
Confidence 4 56889999999994 5553 89888742 111122111 111223344445542 3455566899999
Q ss_pred HHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEecc
Q 000521 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFI 1435 (1446)
Q Consensus 1359 rQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~ 1435 (1446)
|||++|||||+.+|++||+||||++||..+.+.|.+.|++.. .+.|+|+|||+++.+.. ||+|+||++|+|+|.|.+
T Consensus 160 ~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~ 239 (327)
T PRK11308 160 RQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTK 239 (327)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999998764 38999999999999975 999999999999999987
Q ss_pred chhh
Q 000521 1436 CRYF 1439 (1446)
Q Consensus 1436 ~~~~ 1439 (1446)
..++
T Consensus 240 ~~~~ 243 (327)
T PRK11308 240 EQIF 243 (327)
T ss_pred HHHh
Confidence 7665
No 258
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=6.4e-38 Score=366.18 Aligned_cols=214 Identities=27% Similarity=0.343 Sum_probs=179.7
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 5899999999964 3699999999999999999999999999999999999999999999999998764 356789999
Q ss_pred EEeCCCCCCC-CcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1298 VVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1298 ~VpQdp~lF~-gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
|+||++.+++ .|+++|+..+. ..++.+..+.+ .+.++.+|++.........||||||||++|||||+++|+
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~ 155 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFARLESKADVRVALLSGGMKRRLTLARALINDPQ 155 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999886 59999996321 12222222211 122333355544455556799999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1374 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+|+|||||++||+++.+.+.+.|++.. +++|||++||+++.+.. ||+|++|++|++++.|++..+.
T Consensus 156 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 223 (303)
T TIGR01288 156 LLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALI 223 (303)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999998763 47899999999999875 9999999999999999987654
No 259
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6.9e-38 Score=365.33 Aligned_cols=213 Identities=26% Similarity=0.374 Sum_probs=184.2
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++|++++|++ ..+|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.. +...+|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999963 469999999999999999999999999999999999999999999999999977 44678899999
Q ss_pred EeCCCCCCCC-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1299 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1299 VpQdp~lF~g-TIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+||+|.+|++ |++||+.++.. ...++..+ ...+.++.+|++........+||+|||||++||||++++|++
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 154 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELVGLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKV 154 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHCCCchHhcCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999987 99999964321 12222111 123344445777666667778999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1375 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|+|||||++||+++.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|++..+.
T Consensus 155 liLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 220 (301)
T TIGR03522 155 LILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELS 220 (301)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999987778999999999999876 9999999999999999998763
No 260
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-38 Score=359.66 Aligned_cols=210 Identities=24% Similarity=0.340 Sum_probs=180.4
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5999999999963 36999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEeCCCCCCCC-cHHHhcCCCCC--------C---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000521 1298 VVPQSPFLFEG-SLRDNLDPFHM--------N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1365 (1446)
Q Consensus 1298 ~VpQdp~lF~g-TIR~NLdp~~~--------~---~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1365 (1446)
|+||++.++.+ |+++|+..... . .++++.++++.+++ +........+||||||||++||
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l---------~~~~~~~~~~LSgG~~qrv~la 159 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGL---------KPLAHRLVDSLSGGERQRAWIA 159 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCC---------HHHhcCCcccCCHHHHHHHHHH
Confidence 99999877665 99999974311 0 12234455555544 3333444457999999999999
Q ss_pred HHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchh
Q 000521 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
||++.+|+||||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|.+..+
T Consensus 160 ral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~ 235 (265)
T PRK10575 160 MLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAEL 235 (265)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHh
Confidence 99999999999999999999999999999998763 3799999999999986 4899999999999999887654
No 261
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-38 Score=360.63 Aligned_cols=209 Identities=25% Similarity=0.336 Sum_probs=175.6
Q ss_pred EEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhH----hcc
Q 000521 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGR 1295 (1446)
Q Consensus 1220 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l----R~~ 1295 (1446)
.++|++.+|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 46688888854 368999999999999999999999999999999999999999999999999988776543 468
Q ss_pred eEEEeCCCCCCC-CcHHHhcCCCC---CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000521 1296 FAVVPQSPFLFE-GSLRDNLDPFH---MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1446)
Q Consensus 1296 i~~VpQdp~lF~-gTIR~NLdp~~---~~~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1446)
++|+||++.+|+ .|+++|+.... .... +++.++++ .+|++........+||+|||||++||||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~---------~~~l~~~~~~~~~~LS~Gq~qrv~lAra 174 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALE---------LVGLEGWEHKYPDELSGGMQQRVGLARA 174 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHH---------HcCCHhHhhCCcccCCHHHHHHHHHHHH
Confidence 999999999885 59999996421 1111 22333333 3455544555566899999999999999
Q ss_pred hccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1368 LLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++++|+||||||||++||..+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|++..++
T Consensus 175 l~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 175 LAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999998764 37999999999998865 8999999999999999887654
No 262
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.1e-37 Score=355.61 Aligned_cols=212 Identities=37% Similarity=0.660 Sum_probs=191.2
Q ss_pred CCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeCeEEEEcCCC
Q 000521 598 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQVP 677 (1446)
Q Consensus 598 ~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~~i~yv~Q~p 677 (1446)
.+..++++|+++.+ +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|.|+|++|++
T Consensus 36 ~~~~l~i~nls~~~--------~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g~i~yv~q~~ 107 (282)
T cd03291 36 DDNNLFFSNLCLVG--------APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSGRISFSSQFS 107 (282)
T ss_pred CCCeEEEEEEEEec--------ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEEEEeCcc
Confidence 45678999999852 2359999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCc
Q 000521 678 WILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVL 757 (1446)
Q Consensus 678 ~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~ 757 (1446)
++++.|++||+.++...++.++.+.++++++...+..+|.+.++.+++++.+||||||||++||||++.+|+++||||||
T Consensus 108 ~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt 187 (282)
T cd03291 108 WIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPF 187 (282)
T ss_pred cccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 99999999999987655556677888889998889999999989999999999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHh
Q 000521 758 SAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 758 s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
++||+.+.+.+.+.++.. +.+++|+|++||+++.+..||++++|++|++++.|+++++..
T Consensus 188 ~gLD~~~~~~l~~~ll~~-~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 247 (282)
T cd03291 188 GYLDVFTEKEIFESCVCK-LMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQS 247 (282)
T ss_pred ccCCHHHHHHHHHHHHHH-hhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 999999988887754322 345789999999999998899999999999999999988754
No 263
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-38 Score=357.89 Aligned_cols=215 Identities=26% Similarity=0.401 Sum_probs=182.0
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCCCC--ChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1290 (1446)
.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+.++ ++|+|.+||.++... +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 4899999999963 4699999999999999999999999999999999999763 489999999999876 456
Q ss_pred hHhcceEEEeCCCCCCCCcHHHhcCCCCCC----C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHMN----D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~gTIR~NLdp~~~~----~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
..|++++|+||+|.+|++|+++|+.+.... . ++++.++++.+++.+. +.+..+..+.+||+|||||+
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qrv 158 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDE-----VKDRLHDSALSLSGGQQQRL 158 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchh-----hHHHhhcChhhCCHHHHHHH
Confidence 778899999999999999999999753211 1 1223444444443221 23345666778999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++.+|+++||||||++||.++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 159 ~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 159 CIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHH
Confidence 9999999999999999999999999999999999987667999999999999965 8999999999999999887654
No 264
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-38 Score=358.04 Aligned_cols=215 Identities=25% Similarity=0.396 Sum_probs=180.7
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCCCC--ChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1290 (1446)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999963 4699999999999999999999999999999999999984 899999999998753 345
Q ss_pred hHhcceEEEeCCCCCCCCcHHHhcCCCC----CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~gTIR~NLdp~~----~~~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
.+|++++++||+|.+|+.|+++|+.... ...+ +++.++++..++.+.+ +...+....+||+|||||+
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~Gq~qr~ 155 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEV-----KSELNKPGTRLSGGQQQRL 155 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchh-----HHHHhCChhhcCHHHHHHH
Confidence 6788999999999999999999997421 1111 2234444444443221 2334566678999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++++|+||+|||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|.+..+.
T Consensus 156 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 156 CIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred HHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 9999999999999999999999999999999999887678999999999998765 8999999999999999886554
No 265
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=4e-38 Score=350.20 Aligned_cols=197 Identities=32% Similarity=0.462 Sum_probs=165.4
Q ss_pred EEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEE
Q 000521 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1446)
Q Consensus 1220 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1299 (1446)
+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 46899999964 36999999999999999999999999999999999999999999999998874 468899999
Q ss_pred eCCCCC---CCCcHHHhcCCCCCC-----------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000521 1300 PQSPFL---FEGSLRDNLDPFHMN-----------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1365 (1446)
Q Consensus 1300 pQdp~l---F~gTIR~NLdp~~~~-----------~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1365 (1446)
||+|.+ |+.|++||+...... .++++.++++.. |++........+||||||||++||
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LSgG~~qrv~la 144 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERV---------GLSELADRQIGELSGGQQQRVLLA 144 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHc---------CCHHHHhCCcccCCHHHHHHHHHH
Confidence 999976 568999998643211 112333444444 454444455668999999999999
Q ss_pred HHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEe
Q 000521 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~ 1433 (1446)
|||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++| +++.|
T Consensus 145 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 145 RALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999998764 57899999999999876 8999999987 55543
No 266
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-38 Score=358.06 Aligned_cols=215 Identities=25% Similarity=0.359 Sum_probs=182.8
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCceEEEcCeeCCC--CChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1290 (1446)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGS--FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECC--EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 5899999999964 369999999999999999999999999999999999986 379999999999853 4566
Q ss_pred hHhcceEEEeCCCCCCCCcHHHhcCCCCC---C---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1364 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~gTIR~NLdp~~~---~---~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1364 (1446)
.+|++++++||+|.+|+.|+++|+.+... . .++++.++++.+++.+.+. ...+....+||||||||++|
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-----~~~~~~~~~LSgGq~qrv~l 162 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-----DKLKQSGLSLSGGQQQRLCI 162 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-----HHhcCCcccCCHHHHHHHHH
Confidence 78899999999999998999999975321 1 1233445566666654332 23445566899999999999
Q ss_pred HHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEe---------CCEEEEEec
Q 000521 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD---------HGHLVCISF 1434 (1446)
Q Consensus 1365 ARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~---------~G~vvE~~~ 1434 (1446)
|||++++|+||||||||++||.++.+.+.+.|++..+++|||+|||+++.+.. ||||++|+ +|++++.|.
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~ 242 (264)
T PRK14243 163 ARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEFDR 242 (264)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEeCC
Confidence 99999999999999999999999999999999887767899999999998865 79999998 899999999
Q ss_pred cchhh
Q 000521 1435 ICRYF 1439 (1446)
Q Consensus 1435 ~~~~~ 1439 (1446)
+..++
T Consensus 243 ~~~~~ 247 (264)
T PRK14243 243 TEKIF 247 (264)
T ss_pred HHHHH
Confidence 87764
No 267
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=9.6e-38 Score=352.48 Aligned_cols=212 Identities=28% Similarity=0.373 Sum_probs=177.9
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|+++|++++|++ +++|+|+||+|.+||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++|
T Consensus 1 i~i~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGS--FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECC--eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 578999999974 369999999999999999999999999999999999999999999999999987653 4788999
Q ss_pred EeCCCCCCCC-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1299 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1299 VpQdp~lF~g-TIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+||+|.+|++ |+++|+..... .+..+.. ..+.+.++.+|+.........+||+||+||++||||++++|++
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~l 151 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIK-----ARVEELLELVQLEGLGDRYPNQLSGGQRQRVALARALAVEPQV 151 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHH-----HHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999986 99999964321 1111110 1123344444554444555568999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1375 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++|||||++||.++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|+++|.|.+.++.
T Consensus 152 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 219 (237)
T TIGR00968 152 LLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVY 219 (237)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999987543 7999999999999866 8999999999999999877653
No 268
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=8.4e-38 Score=330.86 Aligned_cols=204 Identities=31% Similarity=0.413 Sum_probs=174.0
Q ss_pred CceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC----------
Q 000521 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 668 (1446)
Q Consensus 599 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~---------- 668 (1446)
+..|+++++++++.. +.+++|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.+.|
T Consensus 6 ~~~I~vr~v~~~fG~------~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~ 79 (263)
T COG1127 6 EPLIEVRGVTKSFGD------RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEE 79 (263)
T ss_pred cceEEEeeeeeecCC------EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHH
Confidence 467999999999853 3469999999999999999999999999999999999999999999987
Q ss_pred ------eEEEEcCCCCCCCc-cHHHHHhcC----CCCChhhHHH----HHHHhcchHH-HhhccCCCcccccCCCCccch
Q 000521 669 ------SIAYVPQVPWILSG-TIRDNILFG----KNYDPQSYSE----TLKACTLDVD-ISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 669 ------~i~yv~Q~p~l~~~-ti~~nI~~g----~~~~~~~~~~----v~~~~~l~~d-i~~~~~gd~t~ig~~g~~LSG 732 (1446)
++|+++|+--||+. ||+||+.|. ...+++.+++ -+++++|..+ .+.+| ..|||
T Consensus 80 ~~~ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSG 148 (263)
T COG1127 80 LYEIRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSG 148 (263)
T ss_pred HHHHHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcc
Confidence 59999999999977 999999985 2345544443 4678888877 55555 48999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCc-ccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEe
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGP-HMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 810 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~-~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 810 (1446)
|.+.|+|||||+..||+|+++|||||+|||.++..+-+ ++... ..-+-|+|+|||+++.+.. ||+|+++.||+|...
T Consensus 149 GM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~-LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~ 227 (263)
T COG1127 149 GMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDE-LIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAE 227 (263)
T ss_pred hHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHH-HHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEe
Confidence 99999999999999999999999999999998775544 34321 1236799999999998765 899999999999999
Q ss_pred cChhHHHhcc
Q 000521 811 GSSADLAVSL 820 (1446)
Q Consensus 811 g~~~~l~~~~ 820 (1446)
|+++|+.+.+
T Consensus 228 Gt~~el~~sd 237 (263)
T COG1127 228 GTPEELLASD 237 (263)
T ss_pred CCHHHHHhCC
Confidence 9999997653
No 269
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-38 Score=361.77 Aligned_cols=211 Identities=25% Similarity=0.358 Sum_probs=185.0
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
..|+++||+.+|+ ...+++|+||+|++||.+.+.|||||||||++++|.||..|++|+|.+||.|+..+|++ ++.|
T Consensus 4 ~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 4699999999997 35799999999999999999999999999999999999999999999999999999986 5789
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCCC----CChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFHM----NDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~~----~~d~----ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1446)
++|+|+..||+- ||++|+.++-. ..++ ++.++|+.++|.++ -......|||||+||++||||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~---------~~R~p~qLSGGQqQRVALARA 150 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGF---------ADRKPHQLSGGQQQRVALARA 150 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhh---------hhhChhhhChHHHHHHHHHHH
Confidence 999999999986 99999987633 2333 45666666666543 344566899999999999999
Q ss_pred hccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhhh
Q 000521 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYFI 1440 (1446)
Q Consensus 1368 LLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~~ 1440 (1446)
|..+|++|+||||-|+||.+-...+|.-+++.. .+.|.|.|||+-+... -+|||+||++|+|...|+|..++.
T Consensus 151 L~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~ 226 (352)
T COG3842 151 LVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYE 226 (352)
T ss_pred hhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhh
Confidence 999999999999999999999999988876653 3899999999988755 589999999999999999988764
No 270
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=358.84 Aligned_cols=215 Identities=25% Similarity=0.381 Sum_probs=178.3
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCC--CChHhHhcce
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--TPVRDLRGRF 1296 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~--i~~~~lR~~i 1296 (1446)
++++||+++|+. ..++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|++|
T Consensus 2 l~~~~l~~~~~~-~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPD-GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCC-CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 789999999963 2469999999999999999999999999999999999999999999999999853 3345678999
Q ss_pred EEEeCCC--CCCCCcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000521 1297 AVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1446)
Q Consensus 1297 ~~VpQdp--~lF~gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1371 (1446)
+|+||+| .+|+.|+++|+.... ..+.++..+. ..+.++.+|++.........||+|||||++||||++++
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~~L~~~~~~~~~~LS~Gq~qrv~laral~~~ 155 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKR-----VKEALKAVGMEGFENKPPHHLSGGQKKRVAIAGILAMK 155 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHCCCchhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998 478899999996421 1222221111 12233333554444445568999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1372 ~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|++|||||||++||.++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|++..++
T Consensus 156 p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 225 (275)
T PRK13639 156 PEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999998764 47899999999999875 9999999999999999988764
No 271
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=1.2e-37 Score=357.43 Aligned_cols=217 Identities=24% Similarity=0.386 Sum_probs=179.6
Q ss_pred cEEEEEEEEEecCC-------CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChH
Q 000521 1218 LIEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~ 1290 (1446)
.|+++||+++|++. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999632 35799999999999999999999999999999999999999999999999999887654
Q ss_pred h---HhcceEEEeCCCC--CCC-CcHHHhcCCC----CCCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHH
Q 000521 1291 D---LRGRFAVVPQSPF--LFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQR 1359 (1446)
Q Consensus 1291 ~---lR~~i~~VpQdp~--lF~-gTIR~NLdp~----~~~~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~~LSgGQr 1359 (1446)
. +|++++|+||+|. +++ .|+++|+... .....++. ...+.+.++.+|++ ...+.....||||||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~ 156 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQ-----KARIAELLDMVGLRSEDADKLPRQLSGGQL 156 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHcCCChhhhhCChhhCCHHHH
Confidence 3 6788999999983 443 6999998521 11111111 11123344445665 345566678999999
Q ss_pred HHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccc
Q 000521 1360 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFIC 1436 (1446)
Q Consensus 1360 Qrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~ 1436 (1446)
||++||||++++|+||||||||++||.++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|.+.
T Consensus 157 qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (265)
T TIGR02769 157 QRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVA 236 (265)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHH
Confidence 999999999999999999999999999999999999987643 7899999999999975 8999999999999999987
Q ss_pred hhh
Q 000521 1437 RYF 1439 (1446)
Q Consensus 1437 ~~~ 1439 (1446)
.++
T Consensus 237 ~~~ 239 (265)
T TIGR02769 237 QLL 239 (265)
T ss_pred HHc
Confidence 665
No 272
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-38 Score=368.40 Aligned_cols=216 Identities=19% Similarity=0.304 Sum_probs=175.8
Q ss_pred cEEEEEEEEEecCCC--CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC----CCCceEEEcCeeCCCCChHh
Q 000521 1218 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP----ICGGQILVDGLNIINTPVRD 1291 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~----~~~G~I~IDG~di~~i~~~~ 1291 (1446)
.++++|++++|+... ..+|+||||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.|+.+++.++
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 379999999996532 369999999999999999999999999999999999997 48999999999999998776
Q ss_pred Hhc----ceEEEeCCCC--CCCC-cHHHhc----CCCCCCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCCh
Q 000521 1292 LRG----RFAVVPQSPF--LFEG-SLRDNL----DPFHMND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSV 1356 (1446)
Q Consensus 1292 lR~----~i~~VpQdp~--lF~g-TIR~NL----dp~~~~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSg 1356 (1446)
+|+ +|++|||+|. +.+. |+.+|+ ....... .+++.++|+.+++.+. +...+....+|||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~------~~~l~~~p~~LSg 156 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDP------ASRLDVYPHQLSG 156 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh------HHHHhCCchhCCH
Confidence 553 6999999995 4432 565554 2221111 1233444444443211 1234566778999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEe
Q 000521 1357 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1357 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~ 1433 (1446)
|||||++|||||+.+|++||+||||++||..+...+.+.|++.. .+.|+|+|||+++.+. .||||+||++|+|+|.|
T Consensus 157 Gq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g 236 (326)
T PRK11022 157 GMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETG 236 (326)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 99999999999999999999999999999999999999998764 3789999999999985 59999999999999999
Q ss_pred ccchhh
Q 000521 1434 FICRYF 1439 (1446)
Q Consensus 1434 ~~~~~~ 1439 (1446)
.+..++
T Consensus 237 ~~~~~~ 242 (326)
T PRK11022 237 KAHDIF 242 (326)
T ss_pred CHHHHh
Confidence 887765
No 273
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-37 Score=360.07 Aligned_cols=215 Identities=26% Similarity=0.388 Sum_probs=180.3
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCceEEEcCeeCCC--CCh
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPV 1289 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~ 1289 (1446)
..|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 38 ~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 46899999999964 369999999999999999999999999999999999997 689999999999865 345
Q ss_pred HhHhcceEEEeCCCCCCCCcHHHhcCCCC---CC---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000521 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1363 (1446)
Q Consensus 1290 ~~lR~~i~~VpQdp~lF~gTIR~NLdp~~---~~---~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1363 (1446)
..+|++++|+||++.+|++|+++|+.... .. .+++++++++..++.+.+ ....+....+||||||||++
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-----~~~~~~~~~~LSgGe~qrv~ 190 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEV-----KDQLDSSGLDLSGGQQQRLC 190 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchh-----HHHHhCCcccCCHHHHHHHH
Confidence 67889999999999999999999996421 11 123344455554432211 12345566789999999999
Q ss_pred HHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEE-EEeCCEEEEEeccchh
Q 000521 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEIL-ILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1364 LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIl-vl~~G~vvE~~~~~~~ 1438 (1446)
|||||+++|+||||||||++||.++.+.+.+.|++..+++|+|+|+|+++.+.. |||++ +|++|+|++.|.+..+
T Consensus 191 LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 191 IARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999988767899999999999876 89975 5799999999887654
No 274
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-37 Score=358.95 Aligned_cols=214 Identities=24% Similarity=0.326 Sum_probs=176.9
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCC--CCChHhHhcce
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII--NTPVRDLRGRF 1296 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~--~i~~~~lR~~i 1296 (1446)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 789999999963 46999999999999999999999999999999999999999999999999985 34456778899
Q ss_pred EEEeCCCC--CCCCcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000521 1297 AVVPQSPF--LFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1446)
Q Consensus 1297 ~~VpQdp~--lF~gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1371 (1446)
+|+||+|. ++..|+.+|+.... ..++++..+. +.+.++.+|++........+||||||||++|||||+.+
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~laraL~~~ 154 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRR-----VDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGALVLQ 154 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCHhHhcCCchhCCHHHHHHHHHHHHHHcC
Confidence 99999985 57789999986421 1122222111 12223333444434445568999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1372 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1372 ~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|+||||||||++||.++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 155 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 155 ARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVF 224 (271)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999998764 47899999999999865 9999999999999999887553
No 275
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-37 Score=355.31 Aligned_cols=215 Identities=27% Similarity=0.394 Sum_probs=181.5
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCCCCC-hHh
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTP-VRD 1291 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i~-~~~ 1291 (1446)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 5899999999964 4699999999999999999999999999999999999986 6999999999998663 456
Q ss_pred HhcceEEEeCCCCCCCCcHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCc----hhhhcCCCCCChhHHHHHH
Q 000521 1292 LRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQLIC 1363 (1446)
Q Consensus 1292 lR~~i~~VpQdp~lF~gTIR~NLdp~~----~~~d~ei~~aL~~~~L~~~i~~lgLd----t~v~e~G~~LSgGQrQrl~ 1363 (1446)
+|++++|+||+|.+|+.|+++|+.... ..+++++.+.. .+.++.+|++ +.+.....+||+|||||++
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~ 173 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVA-----QARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLC 173 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHcCCCchhhhHhhCCcccCCHHHHHHHH
Confidence 789999999999999999999997431 12333332211 1223333443 3455667789999999999
Q ss_pred HHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1364 LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||++++|++|||||||++||..+.+.+.+.|++..+++|||+|||+++.+.+ ||||++|++|++++.|.+.+++
T Consensus 174 LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 174 LARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999887667899999999999875 8999999999999998887654
No 276
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-38 Score=358.23 Aligned_cols=212 Identities=20% Similarity=0.286 Sum_probs=182.7
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
-.|+++||+++|+. ..+|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999964 3699999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEeCCCCCCC-CcHHHhcCCCC-C-------CC---hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000521 1297 AVVPQSPFLFE-GSLRDNLDPFH-M-------ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1364 (1446)
Q Consensus 1297 ~~VpQdp~lF~-gTIR~NLdp~~-~-------~~---d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1364 (1446)
+|+||++.+|. .|+++|+.+.. . .. ++++.++++.. |++.........||+|||||++|
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~Gq~qrv~l 154 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQAT---------GITHLADQSVDTLSGGQRQRAWI 154 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHc---------CCHHHhcCCcccCChHHHHHHHH
Confidence 99999998875 59999997531 1 11 12233344443 55544556667899999999999
Q ss_pred HHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1365 ARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|||++++|++|||||||++||.++.+.+.+.|++.. .++|+|+++|+++.+.+ ||+|++|++|++++.|.+..++
T Consensus 155 aral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 155 AMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999998764 37899999999998865 8999999999999999887653
No 277
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.1e-37 Score=366.80 Aligned_cols=214 Identities=27% Similarity=0.371 Sum_probs=180.5
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+...+ ...|++++
T Consensus 41 ~i~i~nl~k~y~~--~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGD--KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 5999999999964 36999999999999999999999999999999999999999999999999997654 56789999
Q ss_pred EEeCCCCCCC-CcHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1298 VVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1298 ~VpQdp~lF~-gTIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
|+||++.++. .|+++|+..+.. .+..+..+. ..+.++.+|++........+||+|||||++|||||+.+|+
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P~ 192 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFARLESKADARVSDLSGGMKRRLTLARALINDPQ 192 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCchhhCCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999875 599999975321 122222211 1223333355544455556799999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1374 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||+|++|++|++++.|++..+.
T Consensus 193 lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~ 260 (340)
T PRK13536 193 LLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALI 260 (340)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999998764 48999999999999975 9999999999999999988764
No 278
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-37 Score=355.61 Aligned_cols=215 Identities=23% Similarity=0.394 Sum_probs=182.7
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCceEEEcCeeCCC--CChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1290 (1446)
.++++||+++|++ .++|+|+||+|++||.+||+|++|||||||+++|.|+.+ |++|+|.+||.+++. .+..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 3789999999964 369999999999999999999999999999999999875 389999999999875 3466
Q ss_pred hHhcceEEEeCCCCCCCCcHHHhcCCCC---CC-Ch----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~gTIR~NLdp~~---~~-~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
.+|++++|+||+|.+|++|+++|+.... .. ++ +++.++++.+++.+.+. ...+..+.+||+|||||+
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-----~~~~~~~~~LS~Gq~qrv 155 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVK-----DKLDKSALGLSGGQQQRL 155 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHH-----HHHhCCcccCCHHHHHHH
Confidence 7899999999999999999999997431 11 11 23445566666654432 223455678999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++++|+||+|||||++||..+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 156 ~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14266 156 CIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIF 233 (250)
T ss_pred HHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHH
Confidence 9999999999999999999999999999999999987778999999999998876 7999999999999999887653
No 279
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-37 Score=368.94 Aligned_cols=214 Identities=28% Similarity=0.396 Sum_probs=181.5
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
..++++|++++|+. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++.+.+. .|+++
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 35999999999964 369999999999999999999999999999999999999999999999999987764 47789
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
+|++|++.+|+. |++||+.+.. ..+..++.+ .+.+.++.+|++........+||||||||++|||||+++|
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P 168 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRP 168 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 9999997542 122222221 1223344446665556666789999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++|+||||||+||..+.+.+.+.|++.. .+.|+|+|||+++.+.. ||||++|++|++++.|+|..++
T Consensus 169 ~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~ 238 (377)
T PRK11607 169 KLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIY 238 (377)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHH
Confidence 9999999999999999999988776653 37899999999998754 9999999999999999998765
No 280
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-37 Score=355.40 Aligned_cols=218 Identities=23% Similarity=0.328 Sum_probs=183.3
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhH-hcce
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1296 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1296 (1446)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5899999999963 469999999999999999999999999999999999999999999999999988876554 4569
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCCC-----------CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFHM-----------ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1360 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~~-----------~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQ 1360 (1446)
+|+||+|.+|++ |+++|+.+... .. +.+..+.. ....+.++.+|++........+||+||||
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~gl~~~~~~~~~~LS~G~~q 160 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEAL--DRAATWLERVGLLEHANRQAGNLAYGQQR 160 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHH--HHHHHHHHhCChhhhhhCChhhCCHHHHH
Confidence 999999999986 99999975311 00 00000111 12234455557777777778899999999
Q ss_pred HHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccch
Q 000521 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1361 rl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
|++||||++++|++|||||||++||.++.+.+.+.|++..+ ++|||++||+++.+.+ ||+|++|++|++++.|++..
T Consensus 161 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 240 (255)
T PRK11300 161 RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEE 240 (255)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHH
Confidence 99999999999999999999999999999999999987642 7899999999999866 89999999999999998876
Q ss_pred hh
Q 000521 1438 YF 1439 (1446)
Q Consensus 1438 ~~ 1439 (1446)
++
T Consensus 241 ~~ 242 (255)
T PRK11300 241 IR 242 (255)
T ss_pred Hh
Confidence 53
No 281
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-37 Score=354.77 Aligned_cols=214 Identities=24% Similarity=0.341 Sum_probs=181.2
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCC-CCChHh
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII-NTPVRD 1291 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~-~i~~~~ 1291 (1446)
.++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4899999999963 4699999999999999999999999999999999999986 5999999999986 456677
Q ss_pred HhcceEEEeCCCCCCCCcHHHhcCCCC---CCC-h----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000521 1292 LRGRFAVVPQSPFLFEGSLRDNLDPFH---MND-D----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1363 (1446)
Q Consensus 1292 lR~~i~~VpQdp~lF~gTIR~NLdp~~---~~~-d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1363 (1446)
+|+.++|+||+|.+|++|+++|+.... ... + +++.++++.+++.+. +..........||+|||||++
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~LS~G~~qrv~ 155 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDE-----VKDRLKSHAFGLSGGQQQRLC 155 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchh-----hhHHhhcCcccCCHHHHHHHH
Confidence 899999999999999999999997431 111 1 123334444444322 123445566789999999999
Q ss_pred HHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1364 LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
||||++.+|++|||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|.+.++
T Consensus 156 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (249)
T PRK14253 156 IARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVI 231 (249)
T ss_pred HHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999987667999999999999886 899999999999999887654
No 282
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-38 Score=361.65 Aligned_cols=204 Identities=27% Similarity=0.393 Sum_probs=175.5
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------- 668 (1446)
..++++|++-+|.. ..+++|+||+|++||++++.|||||||||+|++|.|+..|++|+|.++|
T Consensus 4 ~~l~i~~v~k~yg~------~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR 77 (352)
T COG3842 4 PALEIRNVSKSFGD------FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKR 77 (352)
T ss_pred ceEEEEeeeeecCC------eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhc
Confidence 46899999999862 2359999999999999999999999999999999999999999999987
Q ss_pred eEEEEcCCCCCCCc-cHHHHHhcCCCC----C-h---hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHH
Q 000521 669 SIAYVPQVPWILSG-TIRDNILFGKNY----D-P---QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 739 (1446)
Q Consensus 669 ~i~yv~Q~p~l~~~-ti~~nI~~g~~~----~-~---~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~ 739 (1446)
+|++|+|+.-||+. ||+|||.||... . + +++.++++..+|+.-- ..+...||||||||||
T Consensus 78 ~ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~-----------~R~p~qLSGGQqQRVA 146 (352)
T COG3842 78 PIGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFA-----------DRKPHQLSGGQQQRVA 146 (352)
T ss_pred ccceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhh-----------hhChhhhChHHHHHHH
Confidence 59999999999976 999999999652 2 2 3677777777776533 4566799999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcch-hhhCCEEEEEeCCEEEEecChhHHHh
Q 000521 740 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 740 lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~-l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
|||||..+|+++|||||+||||.+..+++-..+.......|.|.|+|||+.+. +..+|+|.+|++|+|...|+++|+..
T Consensus 147 LARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~ 226 (352)
T COG3842 147 LARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYE 226 (352)
T ss_pred HHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhh
Confidence 99999999999999999999999998888776433223347899999999876 67799999999999999999999975
Q ss_pred cc
Q 000521 819 SL 820 (1446)
Q Consensus 819 ~~ 820 (1446)
..
T Consensus 227 ~P 228 (352)
T COG3842 227 RP 228 (352)
T ss_pred Cc
Confidence 43
No 283
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-37 Score=353.28 Aligned_cols=211 Identities=26% Similarity=0.355 Sum_probs=180.9
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 2 MLEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 3789999999964 46999999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEeCCCCC-CCCcHHHhcCCCCC-C--C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000521 1298 VVPQSPFL-FEGSLRDNLDPFHM-N--D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1446)
Q Consensus 1298 ~VpQdp~l-F~gTIR~NLdp~~~-~--~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1369 (1446)
|+||++.+ +..|+++|+..... . + ++++.++++.. |++.........||||||||++|||||+
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LSgGe~qrv~la~al~ 150 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQV---------DLAHLAGRDYPQLSGGEQQRVQLARVLA 150 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHc---------CCHhHhcCCcccCCHHHHHHHHHHHHHh
Confidence 99999987 56799999865321 1 1 12233344443 5554455556689999999999999999
Q ss_pred ------cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhh
Q 000521 1370 ------KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1370 ------r~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++|++|+|||||++||+++.+.+.+.|++.. +++|||+|||+++.+. .||+|++|++|++++.|++.+++
T Consensus 151 ~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 151 QLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVL 229 (258)
T ss_pred cccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHh
Confidence 5999999999999999999999999998764 4789999999999887 58999999999999999887654
No 284
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-37 Score=362.52 Aligned_cols=217 Identities=24% Similarity=0.406 Sum_probs=182.5
Q ss_pred CccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCceEEEcCeeCCCC--C
Q 000521 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--P 1288 (1446)
Q Consensus 1216 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~i--~ 1288 (1446)
+..|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++ |++|+|.+||.++... +
T Consensus 43 ~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 43 DAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred CceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 446999999999964 469999999999999999999999999999999999986 6899999999998753 4
Q ss_pred hHhHhcceEEEeCCCCCCCCcHHHhcCCCCC---------------C-----ChHHHHHHHHHccHHHHHHhCCCchhhh
Q 000521 1289 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---------------N-----DDLKIWSVLEKCHVKEEVEAVGLETFVK 1348 (1446)
Q Consensus 1289 ~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~---------------~-----~d~ei~~aL~~~~L~~~i~~lgLdt~v~ 1348 (1446)
...+|++++|+||++.+|++|+++|+..... . .++++.++++.+++.+. ++...+
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~ 195 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDE-----VNDRLD 195 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchh-----hhHHhc
Confidence 5678899999999999999999999974210 0 12234444444443221 234456
Q ss_pred cCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEE-EEEeC
Q 000521 1349 ESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEI-LILDH 1426 (1446)
Q Consensus 1349 e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI-lvl~~ 1426 (1446)
....+||||||||++|||||+++|+||||||||++||..+.+.+.+.|++..++.|+|+|||+++.+.. ||+| ++|++
T Consensus 196 ~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~~ 275 (305)
T PRK14264 196 DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLTG 275 (305)
T ss_pred CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEecC
Confidence 667789999999999999999999999999999999999999999999988777899999999999875 8997 57899
Q ss_pred CEEEEEeccchhh
Q 000521 1427 GHLVCISFICRYF 1439 (1446)
Q Consensus 1427 G~vvE~~~~~~~~ 1439 (1446)
|++++.|.+..++
T Consensus 276 G~i~~~g~~~~~~ 288 (305)
T PRK14264 276 GELVEYDDTDKIF 288 (305)
T ss_pred CEEEEeCCHHHHH
Confidence 9999999876553
No 285
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-37 Score=356.56 Aligned_cols=215 Identities=26% Similarity=0.413 Sum_probs=179.2
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCCC--CChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~~ 1290 (1446)
.++++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGS--FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECC--EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 4899999999964 3699999999999999999999999999999999999974 69999999999854 4456
Q ss_pred hHhcceEEEeCCCCCCC-CcHHHhcCCCC----CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFE-GSLRDNLDPFH----MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~-gTIR~NLdp~~----~~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1446)
.+|+.++++||++.+|+ .|+++|+.... ..+ ++++.++++.+++.+.+ +........+||||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qr 156 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEV-----KDRLDKPGGGLSGGQQQR 156 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hhHhhCCcccCCHHHHHH
Confidence 78899999999999997 49999986321 111 12333444444442211 234455667899999999
Q ss_pred HHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEe------CCEEEEEec
Q 000521 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD------HGHLVCISF 1434 (1446)
Q Consensus 1362 l~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~------~G~vvE~~~ 1434 (1446)
++||||++++|+++||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|+ +|+|++.|.
T Consensus 157 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~~~ 236 (258)
T PRK14241 157 LCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEIDD 236 (258)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEecCC
Confidence 99999999999999999999999999999999999887667899999999999864 89999997 899999998
Q ss_pred cchhh
Q 000521 1435 ICRYF 1439 (1446)
Q Consensus 1435 ~~~~~ 1439 (1446)
+..++
T Consensus 237 ~~~~~ 241 (258)
T PRK14241 237 TEKIF 241 (258)
T ss_pred HHHHH
Confidence 87653
No 286
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.2e-37 Score=363.79 Aligned_cols=217 Identities=25% Similarity=0.379 Sum_probs=177.2
Q ss_pred cEEEEEEEEEecCC--CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEEcCeeCCCCChHhH
Q 000521 1218 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC---GGQILVDGLNIINTPVRDL 1292 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~---~G~I~IDG~di~~i~~~~l 1292 (1446)
.++++|++++|+.. ...+++||||+|++||++||+|+||||||||+++|.|+++|. +|+|.+||.|+..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 58999999999632 246999999999999999999999999999999999999996 9999999999999987765
Q ss_pred h----cceEEEeCCC--CCCC-CcHHHhcC----CCCCCChHHHHHHHHHccHHHHHHhCCCc---hhhhcCCCCCChhH
Q 000521 1293 R----GRFAVVPQSP--FLFE-GSLRDNLD----PFHMNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESGISFSVGQ 1358 (1446)
Q Consensus 1293 R----~~i~~VpQdp--~lF~-gTIR~NLd----p~~~~~d~ei~~aL~~~~L~~~i~~lgLd---t~v~e~G~~LSgGQ 1358 (1446)
| ++|+|||||| .+++ -|+.+|+. .+...+.++..+. ..+.++..|++ ..++.....|||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~-----~~~~L~~vgL~~~~~~~~~~p~~LSgG~ 166 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEE-----SVRMLDAVKMPEARKRMKMYPHEFSGGM 166 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcCCCChHHHhcCCcccCCHHH
Confidence 4 4799999999 4555 37777662 2222222221111 11222223443 23456677899999
Q ss_pred HHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEecc
Q 000521 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFI 1435 (1446)
Q Consensus 1359 rQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~ 1435 (1446)
|||++|||||+.+|++||+|||||+||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|.|.+
T Consensus 167 ~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~~ 246 (330)
T PRK09473 167 RQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNA 246 (330)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999987643 7899999999999874 899999999999999998
Q ss_pred chhh
Q 000521 1436 CRYF 1439 (1446)
Q Consensus 1436 ~~~~ 1439 (1446)
..++
T Consensus 247 ~~i~ 250 (330)
T PRK09473 247 RDVF 250 (330)
T ss_pred HHHH
Confidence 7765
No 287
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-37 Score=357.04 Aligned_cols=216 Identities=26% Similarity=0.366 Sum_probs=182.7
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCCC--CCh
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1289 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~ 1289 (1446)
-.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 19 SVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred ceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 36999999999964 3699999999999999999999999999999999999863 58999999999864 344
Q ss_pred HhHhcceEEEeCCCCCCCCcHHHhcCCCCC---C---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000521 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1363 (1446)
Q Consensus 1290 ~~lR~~i~~VpQdp~lF~gTIR~NLdp~~~---~---~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1363 (1446)
..+|++++|+||++.+|++|+++|+..... . .++++.++++.+++.+.+ ..........||||||||++
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LSgGq~qrv~ 171 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEV-----KDKLKEKGTALSGGQQQRLC 171 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhh-----HHHhcCCcccCCHHHHHHHH
Confidence 567899999999999998999999965321 1 123344555555554322 22344556689999999999
Q ss_pred HHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEe---------CCEEEEEe
Q 000521 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD---------HGHLVCIS 1433 (1446)
Q Consensus 1364 LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~---------~G~vvE~~ 1433 (1446)
|||||+++|++|||||||++||.++.+.+.+.|++..+++|||+|+|+++.+.. ||+|++|+ +|++++.|
T Consensus 172 LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~g 251 (274)
T PRK14265 172 IARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEFS 251 (274)
T ss_pred HHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEeC
Confidence 999999999999999999999999999999999987778999999999999865 89999997 89999999
Q ss_pred ccchhh
Q 000521 1434 FICRYF 1439 (1446)
Q Consensus 1434 ~~~~~~ 1439 (1446)
.+.+++
T Consensus 252 ~~~~~~ 257 (274)
T PRK14265 252 PTEQMF 257 (274)
T ss_pred CHHHHH
Confidence 987664
No 288
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.1e-38 Score=341.79 Aligned_cols=201 Identities=29% Similarity=0.389 Sum_probs=168.6
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
|.+++.+..|+.- .+++|||++|+.||++++.|||||||||||++|.|+..|++|.|.++|
T Consensus 3 i~i~~~~~~~~~~------~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~ 76 (345)
T COG1118 3 IRINNVKKRFGAF------GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRD 76 (345)
T ss_pred eeehhhhhhcccc------cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhh
Confidence 5566666666532 348999999999999999999999999999999999999999999987
Q ss_pred -eEEEEcCCCCCCC-ccHHHHHhcCCCC---------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 -SIAYVPQVPWILS-GTIRDNILFGKNY---------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 -~i~yv~Q~p~l~~-~ti~~nI~~g~~~---------~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
+||||+|+.-+|. .||.|||.||.+. ...+..+.++.|.|+.--+. ....||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~r-----------yP~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADR-----------YPAQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhc-----------CchhcChHHHHH
Confidence 4999999999886 5999999999632 22466777888888653333 446899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccC-CceEEEEccCcchh-hhCCEEEEEeCCEEEEecChhH
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML-QKTRILCTHNVQAI-SAADMVVVMDKGQVKWIGSSAD 815 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~-~~t~ilvth~~~~l-~~ad~i~~l~~G~i~~~g~~~~ 815 (1446)
|||||||..+|++|||||||+|||++..+.+-+.+. .-..+ |-|+++||||.++. ..||+|++|++|+|...|+++|
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr-~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~e 224 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLR-KLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDE 224 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHH-HHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHH
Confidence 999999999999999999999999999887766532 21222 67999999999885 5599999999999999999999
Q ss_pred HHhcc
Q 000521 816 LAVSL 820 (1446)
Q Consensus 816 l~~~~ 820 (1446)
+....
T Consensus 225 v~~~P 229 (345)
T COG1118 225 VYDHP 229 (345)
T ss_pred HhcCC
Confidence 96543
No 289
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2e-37 Score=354.24 Aligned_cols=210 Identities=22% Similarity=0.304 Sum_probs=180.5
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 789999999964 469999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EeCCCC-CCCCcHHHhcCCCCC--------C---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000521 1299 VPQSPF-LFEGSLRDNLDPFHM--------N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1366 (1446)
Q Consensus 1299 VpQdp~-lF~gTIR~NLdp~~~--------~---~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1366 (1446)
+||+|. .+..|+++|+..+.. . .++++.++++.+ |++.........||+|||||++|||
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrl~la~ 150 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALART---------ELSHLADRDMSTLSGGERQRVHVAR 150 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHc---------CcHhhhcCCcccCCHHHHHHHHHHH
Confidence 999995 456799999965321 0 112334444444 4444445556689999999999999
Q ss_pred HhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhh
Q 000521 1367 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1367 ALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|++.+|+++||||||++||.++.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|.+.+++
T Consensus 151 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 225 (256)
T TIGR03873 151 ALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVL 225 (256)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhh
Confidence 9999999999999999999999999999998764 3789999999999995 59999999999999999887653
No 290
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-37 Score=354.17 Aligned_cols=215 Identities=26% Similarity=0.370 Sum_probs=180.1
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--C---CCceEEEcCeeCCC--CChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIIN--TPVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~--~---~~G~I~IDG~di~~--i~~~ 1290 (1446)
.|+++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 4899999999964 469999999999999999999999999999999999975 4 58999999999964 3455
Q ss_pred hHhcceEEEeCCCCCCCCcHHHhcCCCC---C-CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---M-ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~gTIR~NLdp~~---~-~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
.+|++++|+||+|.+|+.|+++|+.... . .. ++++.++++.+++.+. +.........+||+|||||+
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----i~~~~~~~~~~LS~Gq~qrv 157 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDE-----VKDHLHESALSLSGGQQQRV 157 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccc-----hhhHHhcCcccCCHHHHHHH
Confidence 6788999999999999999999986421 1 11 1233444444443221 22344556678999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++++|++|||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|.+...+
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 158 CIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999887667899999999999875 8999999999999999887655
No 291
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.7e-37 Score=347.55 Aligned_cols=207 Identities=26% Similarity=0.349 Sum_probs=177.4
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.|+++|++++|+. .++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5999999999963 36999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEeCCCCCCCCcHHHhcCCCC----CC-ChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHhccC
Q 000521 1298 VVPQSPFLFEGSLRDNLDPFH----MN-DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKS 1371 (1446)
Q Consensus 1298 ~VpQdp~lF~gTIR~NLdp~~----~~-~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALLr~ 1371 (1446)
|+||+|.+|+.|+++|+.... .. .++++ .+.++.+|++ +.......+||+|||||++||||++++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~---------~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIF---------LDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFM 155 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHHHHH---------HHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999996421 11 11122 2344444664 455667778999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhhcCEEEEEe-CCEEEEEecc
Q 000521 1372 SKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILD-HGHLVCISFI 1435 (1446)
Q Consensus 1372 ~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~-~G~vvE~~~~ 1435 (1446)
|+++||||||++||..+.+.+.+.|++.. .++|+|+|||+++.+..||+|++|+ ++..++.|+.
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~ 222 (225)
T PRK10247 156 PKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARY 222 (225)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhh
Confidence 99999999999999999999999998764 3789999999999999999999995 4444555554
No 292
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-37 Score=369.35 Aligned_cols=201 Identities=27% Similarity=0.358 Sum_probs=169.6
Q ss_pred cccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhH----hcceEEEeCCCCCCCC-
Q 000521 1234 AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGRFAVVPQSPFLFEG- 1308 (1446)
Q Consensus 1234 ~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l----R~~i~~VpQdp~lF~g- 1308 (1446)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.|+.+.+...+ |++++|+||++.+|+.
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999998877654 4689999999999975
Q ss_pred cHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCC
Q 000521 1309 SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVD 1385 (1446)
Q Consensus 1309 TIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD 1385 (1446)
|+++|+.+.. ..+.++..+ ...+.++.+|++........+||||||||++|||||+.+|+|||||||||+||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~-----~~~e~L~~~gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD 196 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERRE-----KALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALD 196 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCC
Confidence 9999997432 112221111 12233444466655566667899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1386 AQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1386 ~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+.+.+.+++.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|++..++
T Consensus 197 ~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 197 PLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEIL 253 (400)
T ss_pred HHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHH
Confidence 999999999998763 48999999999998865 8999999999999999887654
No 293
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.3e-37 Score=348.65 Aligned_cols=212 Identities=29% Similarity=0.449 Sum_probs=185.4
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|+++.|.... .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 1 i~~~~l~~~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (237)
T cd03252 1 ITFEHVRFRYKPDG----PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRR 76 (237)
T ss_pred CEEEEEEEecCCCC----ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhh
Confidence 35789999985321 2469999999999999999999999999999999999999999999876
Q ss_pred eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccC
Q 000521 669 SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 747 (1446)
Q Consensus 669 ~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~ 747 (1446)
.++|++|++++++.|++||+.++.. ...++..+.++..++.+.++.+|.|.++..+..+.+|||||||||+||||++.+
T Consensus 77 ~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~ 156 (237)
T cd03252 77 QVGVVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHN 156 (237)
T ss_pred cEEEEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhC
Confidence 3899999999999999999988643 334455556666778877888998988888999999999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHhc
Q 000521 748 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 819 (1446)
Q Consensus 748 ~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1446)
|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 157 p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (237)
T cd03252 157 PRILIFDEATSALDYESEHAIMRN-MHD-ICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE 226 (237)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc
Confidence 999999999999999999988876 333 3457899999999999988999999999999999999887654
No 294
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-37 Score=349.27 Aligned_cols=212 Identities=27% Similarity=0.376 Sum_probs=178.1
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|+++|++++|+. .++++|+||+|++||++||+|++|||||||+++|.|+++|.+|+|.+||.++...+. .|+.+++
T Consensus 1 l~~~~l~~~~~~--~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGG--FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 579999999964 369999999999999999999999999999999999999999999999999987664 3678999
Q ss_pred EeCCCCCCCC-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1299 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1299 VpQdp~lF~g-TIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+||+|.+|.+ |+++|+.+... .+..+.. ....+.++.+|++........+||+|||||++||||++++|++
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~l 151 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIK-----ERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARALVNEPKV 151 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999976 99999864211 1111110 1122333444666556666678999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1375 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||||++||..+.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|.+.+++
T Consensus 152 lllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~ 219 (232)
T cd03300 152 LLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIY 219 (232)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHH
Confidence 999999999999999999999987643 7999999999999865 8999999999999999876554
No 295
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=3.9e-37 Score=352.19 Aligned_cols=215 Identities=22% Similarity=0.361 Sum_probs=180.3
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCee-----CCCCChHh-
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN-----IINTPVRD- 1291 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~d-----i~~i~~~~- 1291 (1446)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 5899999999964 369999999999999999999999999999999999999999999999999 87776654
Q ss_pred ---HhcceEEEeCCCC--CCC-CcHHHhcCC----CCCCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHH
Q 000521 1292 ---LRGRFAVVPQSPF--LFE-GSLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQ 1360 (1446)
Q Consensus 1292 ---lR~~i~~VpQdp~--lF~-gTIR~NLdp----~~~~~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~~LSgGQrQ 1360 (1446)
.|+.++|+||+|. ++. .|+++|+.. +......++.+ ...+.++.+|++ +..+..+.+|||||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~LS~Gq~q 158 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERVEIDAARIDDLPTTFSGGMQQ 158 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHcCCChhHHhCCCccCCHHHHH
Confidence 3567999999984 343 478888742 11111112211 234555666776 4677888899999999
Q ss_pred HHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccch
Q 000521 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1361 rl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
|++||||++++|+||||||||++||.++.+.+.+.|++..+ +.|+|+|||+++.+.+ ||+|++|++|++++.|.+..
T Consensus 159 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 238 (258)
T PRK11701 159 RLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLTDQ 238 (258)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999987643 7899999999999975 99999999999999998876
Q ss_pred hh
Q 000521 1438 YF 1439 (1446)
Q Consensus 1438 ~~ 1439 (1446)
++
T Consensus 239 ~~ 240 (258)
T PRK11701 239 VL 240 (258)
T ss_pred Hh
Confidence 64
No 296
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-37 Score=353.99 Aligned_cols=215 Identities=24% Similarity=0.341 Sum_probs=183.4
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCCC--CChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~~ 1290 (1446)
.+.+++.+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.|+.. .+..
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4889999999964 3699999999999999999999999999999999999986 79999999999965 3445
Q ss_pred hHhcceEEEeCCCCCCCCcHHHhcCCCCC------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1364 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~gTIR~NLdp~~~------~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1364 (1446)
.+|++++|+||+|.+|..|+++|+.+... ..++++.++++.+++.+.+. ...++...+||+|||||++|
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-----~~~~~~~~~LS~G~~qrv~l 160 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVK-----DKLKVSGLSLSGGQQQRLCI 160 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhh-----hhhhCCcccCCHHHHHHHHH
Confidence 67889999999999999999999975421 11234566666666543322 23345667899999999999
Q ss_pred HHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEe--------CCEEEEEecc
Q 000521 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD--------HGHLVCISFI 1435 (1446)
Q Consensus 1365 ARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~--------~G~vvE~~~~ 1435 (1446)
|||++++|+||+|||||++||..+.+.+.+.|++..+++|+|+|||+++.+.+ ||||++|+ +|++++.|++
T Consensus 161 aral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 161 ARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 99999999999999999999999999999999987678899999999998865 89999996 8999999998
Q ss_pred chhh
Q 000521 1436 CRYF 1439 (1446)
Q Consensus 1436 ~~~~ 1439 (1446)
..++
T Consensus 241 ~~~~ 244 (261)
T PRK14263 241 AQIF 244 (261)
T ss_pred HHHH
Confidence 7654
No 297
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.6e-37 Score=348.49 Aligned_cols=212 Identities=27% Similarity=0.362 Sum_probs=172.6
Q ss_pred EEEEEEEEEecCC--CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC---CCCceEEEcCeeCCCCChHhHh
Q 000521 1219 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLR 1293 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~lR 1293 (1446)
++|+||+++|+.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5799999999755 3689999999999999999999999999999999999999 99999999999885 34678
Q ss_pred cceEEEeCCCCCCCC-cHHHhcCCCCC-CChHHHHHHHHHccHHH-HHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000521 1294 GRFAVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKE-EVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1446)
Q Consensus 1294 ~~i~~VpQdp~lF~g-TIR~NLdp~~~-~~d~ei~~aL~~~~L~~-~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1370 (1446)
++++++||++.+|++ |+++|+.+... .......+..+.....+ .++.++++........+||+|||||++||||+++
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 160 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVKGISGGERRRVSIAVQLLW 160 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccccCcCHHHHHHHHHHHHHHh
Confidence 899999999999987 99999974311 00000001111111122 3333466555555667899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCc-hhH-hhcCEEEEEeCCEEEEEe
Q 000521 1371 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRI-STV-LNMDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl-~ti-~~~DrIlvl~~G~vvE~~ 1433 (1446)
+|++|||||||++||..+.+.+.+.|++.. +++|+|++||++ +.+ ..||+|++|++|++++.|
T Consensus 161 ~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 161 DPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999998764 478999999998 355 568999999999999875
No 298
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-37 Score=354.49 Aligned_cols=216 Identities=25% Similarity=0.370 Sum_probs=182.3
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC-----CceEEEcCeeCCC--CCh
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIIN--TPV 1289 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~--i~~ 1289 (1446)
+.|+++|++++|+. +.+|+|+||+|++||.+||+|++|||||||+++|.|+++|+ +|+|.+||.|++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 46999999999964 36999999999999999999999999999999999999985 8999999999853 345
Q ss_pred HhHhcceEEEeCCCCCCCCcHHHhcCCCC----CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000521 1290 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1446)
Q Consensus 1290 ~~lR~~i~~VpQdp~lF~gTIR~NLdp~~----~~~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1446)
..+|+.++++||++.+|+.|++||+.+.. ..++ +++.++++.+++.+.+ +...+.....||+|||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq~qr 158 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEI-----KHKIHKSALDLSGGQQQR 158 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchh-----hhHhcCCcccCCHHHHHH
Confidence 67889999999999999999999996421 1121 2344555555543322 223455667899999999
Q ss_pred HHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeC-----CEEEEEe
Q 000521 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDH-----GHLVCIS 1433 (1446)
Q Consensus 1362 l~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~-----G~vvE~~ 1433 (1446)
++||||++++|++|||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |++++.|
T Consensus 159 v~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 238 (261)
T PRK14258 159 LCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEFG 238 (261)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEeC
Confidence 999999999999999999999999999999999998742 48999999999999875 899999999 9999999
Q ss_pred ccchhh
Q 000521 1434 FICRYF 1439 (1446)
Q Consensus 1434 ~~~~~~ 1439 (1446)
.+..++
T Consensus 239 ~~~~~~ 244 (261)
T PRK14258 239 LTKKIF 244 (261)
T ss_pred CHHHHH
Confidence 998765
No 299
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-37 Score=358.59 Aligned_cols=217 Identities=24% Similarity=0.339 Sum_probs=179.8
Q ss_pred CccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCceEEEcCeeCCCC--C
Q 000521 1216 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--P 1288 (1446)
Q Consensus 1216 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~i--~ 1288 (1446)
...|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +
T Consensus 37 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 37 KPHVVAKNFSIYYGE--FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred ceEEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 346899999999964 369999999999999999999999999999999999865 4999999999998653 3
Q ss_pred hHhHhcceEEEeCCCCCCCCcHHHhcCCCC---CC-Ch----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000521 1289 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1360 (1446)
Q Consensus 1289 ~~~lR~~i~~VpQdp~lF~gTIR~NLdp~~---~~-~d----~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQ 1360 (1446)
...+|++++|+||+|.+|++|+++|+.+.. .. +. +++.++++..++.+. +..........|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LSgGq~q 189 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDE-----VSDRLDKNALGLSGGQQQ 189 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccc-----hhhHhhCChhhCCHHHHH
Confidence 346788999999999999999999997431 11 11 223344444443221 112334556689999999
Q ss_pred HHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1361 rl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|++|||||+++|++|||||||++||.++.+.+.+.|++..+++|||+|+|+++.+.+ ||+|++|++|++++.|.+.+++
T Consensus 190 rv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 190 RLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999887667899999999999875 8999999999999999887653
No 300
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.7e-37 Score=358.36 Aligned_cols=213 Identities=28% Similarity=0.444 Sum_probs=184.6
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++||+.+|.. ...+|+||||+|++||.+|++||||||||||+++|.|+++|++|+|.++|.|...- ....|+++|
T Consensus 4 ~i~~~~l~k~~~~-~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG-DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC-CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 4788999999973 24799999999999999999999999999999999999999999999999998765 678899999
Q ss_pred EEeCCCCCCCC-cHHHhcCCCCC-------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000521 1298 VVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1446)
Q Consensus 1298 ~VpQdp~lF~g-TIR~NLdp~~~-------~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1369 (1446)
|+||+|.+++. |++|||+++.. ..++++.++++..+|.+ .-......||+|||||+.||+||+
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~---------~~~~~~~~lS~G~kqrl~ia~aL~ 152 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLED---------KANKKVRTLSGGMKQRLSIALALL 152 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCch---------hhCcchhhcCHHHHHHHHHHHHHh
Confidence 99999998876 99999986532 12345666666665543 113334469999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-C-cEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhhhh
Q 000521 1370 KSSKVLCLDECTANVDAQTASILQNAISSECK-G-MTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYFIF 1441 (1446)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~-~-~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~~~ 1441 (1446)
.+|++|||||||++||+.+...+.+.|++..+ + +||++.||.++.+.. ||||++|++|+++..|++.++..+
T Consensus 153 ~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 153 HDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred cCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999998765 4 799999999999987 999999999999999988875443
No 301
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3.7e-37 Score=342.20 Aligned_cols=201 Identities=22% Similarity=0.361 Sum_probs=170.6
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++||+++|+. .++|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+.+.+ ..|++++|
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999962 578999999999999999999999999999999999999999999999997644 46788999
Q ss_pred EeCCCCCCCC-cHHHhcCCC-CC-C-----ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000521 1299 VPQSPFLFEG-SLRDNLDPF-HM-N-----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1446)
Q Consensus 1299 VpQdp~lF~g-TIR~NLdp~-~~-~-----~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1370 (1446)
+||+|.+|.+ |+++|+... .. . .++++.++++..+ ++........+||+|||||++||||+++
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~---------l~~~~~~~~~~LS~G~~qrl~laral~~ 145 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVG---------IADYLDRLPEQLSGGQRQRVALARCLVR 145 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcC---------cHHHhhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999975 999998632 11 1 1223444455444 4444444555899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEec
Q 000521 1371 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISF 1434 (1446)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~ 1434 (1446)
+|++++|||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|++++.|.
T Consensus 146 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 146 PNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999998764 37899999999999875 89999999999998864
No 302
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-37 Score=352.78 Aligned_cols=215 Identities=27% Similarity=0.399 Sum_probs=177.9
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC-----CceEEEcCeeCCC--CChH
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIIN--TPVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~--i~~~ 1290 (1446)
.++++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 4789999999963 46999999999999999999999999999999999999874 8999999999975 3455
Q ss_pred hHhcceEEEeCCCCCCCC-cHHHhcCCCC---C-CChHHHHH----HHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH---M-NDDLKIWS----VLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1361 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~g-TIR~NLdp~~---~-~~d~ei~~----aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQr 1361 (1446)
.+|++++|+||+|.+|++ |+++|+.... . ..+++..+ .++..++++. +.........+||||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qr 156 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDE-----VKDRLKTPATGLSGGQQQR 156 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchh-----hhhhhcCCcccCCHHHHHH
Confidence 778899999999999985 9999996321 1 12222222 2333333221 1222334456899999999
Q ss_pred HHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1362 l~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++||||++++|++|||||||++||..+.+.+.+.|++..+++|+|++||+++.+.+ ||||++|++|++++.|.+.+++
T Consensus 157 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 157 LCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999887668999999999999986 8999999999999999887653
No 303
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-37 Score=353.00 Aligned_cols=213 Identities=23% Similarity=0.278 Sum_probs=180.9
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC--------CceEEEcCeeCCCCChH
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC--------GGQILVDGLNIINTPVR 1290 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~--------~G~I~IDG~di~~i~~~ 1290 (1446)
++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRH--RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECC--EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 789999999964 36999999999999999999999999999999999999998 99999999999988888
Q ss_pred hHhcceEEEeCCCC-CCCCcHHHhcCCCCC-C----C--hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000521 1291 DLRGRFAVVPQSPF-LFEGSLRDNLDPFHM-N----D--DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~-lF~gTIR~NLdp~~~-~----~--d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1362 (1446)
.+|+.++|+||++. +|+.|+++|+..... . . ..+. .....+.++.+|+++..+.....||||||||+
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv 154 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRD-----GEIAWQALALAGATALVGRDVTTLSGGELARV 154 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHH-----HHHHHHHHHHcCcHhhhcCCcccCCHHHHHHH
Confidence 88889999999986 578899999965321 0 0 0110 01123334444676667777778999999999
Q ss_pred HHHHHhc---------cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHh-hcCEEEEEeCCEEE
Q 000521 1363 CLARALL---------KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLV 1430 (1446)
Q Consensus 1363 ~LARALL---------r~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlvl~~G~vv 1430 (1446)
+||||++ .+|++|||||||++||.++.+.+.+.|++..+ ++|||+|+|+++.+. .||+|++|++|+++
T Consensus 155 ~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~ 234 (272)
T PRK13547 155 QFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIV 234 (272)
T ss_pred HHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEE
Confidence 9999999 59999999999999999999999999987643 789999999999986 59999999999999
Q ss_pred EEeccchh
Q 000521 1431 CISFICRY 1438 (1446)
Q Consensus 1431 E~~~~~~~ 1438 (1446)
+.|.+..+
T Consensus 235 ~~g~~~~~ 242 (272)
T PRK13547 235 AHGAPADV 242 (272)
T ss_pred EecCHHHH
Confidence 99887654
No 304
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-37 Score=344.46 Aligned_cols=206 Identities=22% Similarity=0.360 Sum_probs=174.7
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++||+++|+.. ..|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .+++++|
T Consensus 2 l~~~~l~~~~~~~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHHL----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECCc----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 7899999999632 249999999999999999999999999999999999999999999999987654 3678999
Q ss_pred EeCCCCCCCC-cHHHhcCCCC-CC------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000521 1299 VPQSPFLFEG-SLRDNLDPFH-MN------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1446)
Q Consensus 1299 VpQdp~lF~g-TIR~NLdp~~-~~------~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1370 (1446)
+||+|.+|++ |+++|+.... .. .++++.++++.++ ++..+......||+|||||++||||+++
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~---------l~~~~~~~~~~LS~G~~qrv~laral~~ 146 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMG---------IEDLLARLPGQLSGGQRQRVALARCLVR 146 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcC---------cHHHHhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999986 9999997421 11 1223444555544 4444444555799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1371 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+|+++||||||++||.++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 147 ~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~ 218 (232)
T PRK10771 147 EQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELL 218 (232)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999999987643 7899999999999865 8999999999999999887654
No 305
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=2.3e-37 Score=345.61 Aligned_cols=206 Identities=25% Similarity=0.347 Sum_probs=175.4
Q ss_pred EEEEEEEEEecCCC--CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChH---hHh
Q 000521 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLR 1293 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR 1293 (1446)
++++|++++|++.. ..+|+|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996532 4699999999999999999999999999999999999999999999999999877643 468
Q ss_pred cceEEEeCCCCCCC-CcHHHhcCCCCC----CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000521 1294 GRFAVVPQSPFLFE-GSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1446)
Q Consensus 1294 ~~i~~VpQdp~lF~-gTIR~NLdp~~~----~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1368 (1446)
+.++|+||+|.+|. .|+.+|+.+... .+.++..+ ...+.++.+|++........+||+|||||++||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~lS~G~~qrv~laral 156 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARE-----RARAMLEAVGLGDHLDYYPHNLSGGQKQRVAIARAL 156 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHH
Confidence 89999999999987 699999975321 12222211 123444555776666667778999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhhcCEEEEEeCCEE
Q 000521 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHL 1429 (1446)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~~G~v 1429 (1446)
+++|++|+|||||++||.++.+.+.+.|++.. .++|+|+|+|+++....||+|++|++|++
T Consensus 157 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 157 VHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 99999999999999999999999999998765 37999999999998777999999999986
No 306
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-37 Score=344.23 Aligned_cols=211 Identities=28% Similarity=0.440 Sum_probs=187.7
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|... .++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~-----~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 76 (229)
T cd03254 2 EIEFENVNFSYDEK-----KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLR 76 (229)
T ss_pred eEEEEEEEEecCCC-----CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHh
Confidence 47899999998531 2359999999999999999999999999999999999999999999875
Q ss_pred -eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHcc
Q 000521 669 -SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 746 (1446)
Q Consensus 669 -~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~ 746 (1446)
.++|++|+|++++.|++||+.++.+ ...++..+.++.++++..++.+|.|.++..+....+|||||||||+||||+++
T Consensus 77 ~~i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~ 156 (229)
T cd03254 77 SMIGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLR 156 (229)
T ss_pred hhEEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 3999999999999999999998754 34456677788889988899999999999999999999999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHh
Q 000521 747 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 747 ~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.++.||++++|++|++.+.|+.+++..
T Consensus 157 ~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 157 DPKILILDEATSNIDTETEKLIQEA-LEK-LMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 9999999999999999999988876 433 345789999999999988899999999999999999887754
No 307
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-37 Score=350.35 Aligned_cols=205 Identities=28% Similarity=0.353 Sum_probs=171.4
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +.+++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 789999999964 4699999999999999999999999999999999999999999999999998642 346899
Q ss_pred EeCCCCCCC-CcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1299 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1299 VpQdp~lF~-gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+||++.+|+ .|+++|+.... .....+.. ....+.++.+|++........+||||||||++||||++++|++
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrl~laral~~~p~l 149 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRL-----EIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQL 149 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHH-----HHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999887 59999996431 11211111 1123344444665555566678999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEe--CCEEEEEecc
Q 000521 1375 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILD--HGHLVCISFI 1435 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~--~G~vvE~~~~ 1435 (1446)
|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|++++.+.+
T Consensus 150 llLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 150 LLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999998763 38999999999999865 89999998 5999998643
No 308
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=3.4e-37 Score=350.05 Aligned_cols=214 Identities=20% Similarity=0.254 Sum_probs=175.4
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCC--CCCCceEEEcCeeCCCCChHhH-hcc
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDL-RGR 1295 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~l-R~~ 1295 (1446)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+. +|++|+|.+||.++...+.... |..
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 578999999963 46999999999999999999999999999999999994 7999999999999988877664 456
Q ss_pred eEEEeCCCCCCCC-cHHHhcCCCCC----------CChHHHHHHHHHccHHHHHHhCCCchhh-hcCCC-CCChhHHHHH
Q 000521 1296 FAVVPQSPFLFEG-SLRDNLDPFHM----------NDDLKIWSVLEKCHVKEEVEAVGLETFV-KESGI-SFSVGQRQLI 1362 (1446)
Q Consensus 1296 i~~VpQdp~lF~g-TIR~NLdp~~~----------~~d~ei~~aL~~~~L~~~i~~lgLdt~v-~e~G~-~LSgGQrQrl 1362 (1446)
++++||+|.+|++ |+++|+..... .+.++.. + .+.+.++.+|++... ..... .||+|||||+
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl 153 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFL---K--LLKAKLALLGMDEEFLNRSVNEGFSGGEKKRN 153 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHH---H--HHHHHHHHcCCchhhcccccccCcCHHHHHHH
Confidence 9999999999986 89999853210 0111111 1 123344444665332 33333 4999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh--cCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN--MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~--~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++++|++|||||||++||.++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|.+..+.
T Consensus 154 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 154 EILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVELAK 233 (243)
T ss_pred HHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHHhc
Confidence 99999999999999999999999999999999998764 47899999999999986 7999999999999999887443
No 309
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.2e-36 Score=347.71 Aligned_cols=214 Identities=27% Similarity=0.359 Sum_probs=190.8
Q ss_pred CceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC----------
Q 000521 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 668 (1446)
Q Consensus 599 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~---------- 668 (1446)
...++++|+++.|+.. . ..+++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 17 ~~~i~~~~l~~~~~~~-~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~ 92 (257)
T cd03288 17 GGEIKIHDLCVRYENN-L---KPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHT 92 (257)
T ss_pred CceEEEEEEEEEeCCC-C---CcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHH
Confidence 4568999999999642 1 2369999999999999999999999999999999999999999999875
Q ss_pred ---eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHc
Q 000521 669 ---SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 745 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly 745 (1446)
.++||+|+|+++++|++||+........+.+.++++..++.+.++.+|.|.++.+++.+.+||||||||++||||++
T Consensus 93 ~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 93 LRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred HhhhEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 48999999999999999999765444555677788888999899999999999999999999999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHh
Q 000521 746 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 746 ~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
++|++++|||||++||+++.+.+++. +.. +.+++|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~-l~~-~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 243 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKV-VMT-AFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLA 243 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHH-HHH-hcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999998887765 433 345789999999999998999999999999999999988764
No 310
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-37 Score=362.81 Aligned_cols=213 Identities=21% Similarity=0.326 Sum_probs=175.9
Q ss_pred cEEEEEEEEEecC--CCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC----CCCceEEEcCeeCCCCChHh
Q 000521 1218 LIEFQNVTMRYKP--SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP----ICGGQILVDGLNIINTPVRD 1291 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~--~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~----~~~G~I~IDG~di~~i~~~~ 1291 (1446)
-++++|++++|+. +...+|+||||+|++||.+||+|+||||||||+++|.|+.+ |++|+|.+||+|+.+++.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4899999999953 22469999999999999999999999999999999999986 58999999999999888766
Q ss_pred Hh----cceEEEeCCCC--CCC-CcHHHhcCCC-------CC-CC-----hHHHHHHHHHccHHHHHHhCCCch---hhh
Q 000521 1292 LR----GRFAVVPQSPF--LFE-GSLRDNLDPF-------HM-ND-----DLKIWSVLEKCHVKEEVEAVGLET---FVK 1348 (1446)
Q Consensus 1292 lR----~~i~~VpQdp~--lF~-gTIR~NLdp~-------~~-~~-----d~ei~~aL~~~~L~~~i~~lgLdt---~v~ 1348 (1446)
++ ++|++|||+|. +++ -||.+|+... .. .. ++++.++|+.+ ||+. ...
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~---------gL~~~~~~~~ 153 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRV---------GIKDHKDAMR 153 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHC---------CCCChHHHHh
Confidence 53 47999999996 333 4888887420 00 01 12233344444 5532 234
Q ss_pred cCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEe
Q 000521 1349 ESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILD 1425 (1446)
Q Consensus 1349 e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~ 1425 (1446)
.....||||||||++|||||+.+|+|||+||||++||..+...+.+.|++..+ +.|+|+|||+++.+.. ||||+||+
T Consensus 154 ~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~ 233 (330)
T PRK15093 154 SFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLY 233 (330)
T ss_pred CCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEE
Confidence 55668999999999999999999999999999999999999999999987643 7899999999999965 99999999
Q ss_pred CCEEEEEeccchhh
Q 000521 1426 HGHLVCISFICRYF 1439 (1446)
Q Consensus 1426 ~G~vvE~~~~~~~~ 1439 (1446)
+|+|+|.|.+..++
T Consensus 234 ~G~ive~g~~~~i~ 247 (330)
T PRK15093 234 CGQTVETAPSKELV 247 (330)
T ss_pred CCEEEEECCHHHHH
Confidence 99999999887765
No 311
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-37 Score=327.48 Aligned_cols=207 Identities=28% Similarity=0.365 Sum_probs=172.4
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|.++.|.... ...++++||||++.+||..+|+|+||||||||.++|+|..+|++|+|.++|
T Consensus 3 ~l~v~nl~~~y~~~~--~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~ 80 (252)
T COG1124 3 LLSVRNLSIVYGGGK--FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAF 80 (252)
T ss_pred eEEEeceEEEecCCc--chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhh
Confidence 478899999997542 122579999999999999999999999999999999999999999999987
Q ss_pred --eEEEEcCCCC--CC-CccHHHHHhcC-----CCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000521 669 --SIAYVPQVPW--IL-SGTIRDNILFG-----KNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1446)
Q Consensus 669 --~i~yv~Q~p~--l~-~~ti~~nI~~g-----~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi 738 (1446)
.|-+|+|+|. +- .-||++-|.=+ .+-.+++..++++..+|.... .......|||||||||
T Consensus 81 ~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~----------l~R~P~eLSGGQ~QRi 150 (252)
T COG1124 81 YRPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSF----------LDRRPHELSGGQRQRI 150 (252)
T ss_pred ccceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHH----------HhcCchhcChhHHHHH
Confidence 3899999996 22 34888888532 122334577888888887643 2345568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHH
Q 000521 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 817 (1446)
Q Consensus 739 ~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~ 817 (1446)
||||||..+|+++|||||||+||+.+...|++-+..-...++-|.|+|||++..+.+ ||||++|++|++++.++.+++.
T Consensus 151 aIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~ 230 (252)
T COG1124 151 AIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELL 230 (252)
T ss_pred HHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhh
Confidence 999999999999999999999999999999986443223455699999999999987 9999999999999999988886
Q ss_pred hc
Q 000521 818 VS 819 (1446)
Q Consensus 818 ~~ 819 (1446)
..
T Consensus 231 ~~ 232 (252)
T COG1124 231 SH 232 (252)
T ss_pred cC
Confidence 43
No 312
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.5e-37 Score=359.80 Aligned_cols=204 Identities=25% Similarity=0.357 Sum_probs=170.2
Q ss_pred EecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCC
Q 000521 1227 RYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF 1306 (1446)
Q Consensus 1227 ~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF 1306 (1446)
+|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|++++|+||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 4642 369999999999999999999999999999999999999999999999999976 3456788999999999999
Q ss_pred CC-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCC
Q 000521 1307 EG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTA 1382 (1446)
Q Consensus 1307 ~g-TIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS 1382 (1446)
+. |+++|+.++.. .+..+..+ ...+.++.+|++........+||||||||++|||||+++|++|+|||||+
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEE-----RAEELLELFELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 86 99999975321 11111111 12233333455544455556899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1383 NVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1383 ~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
+||+++.+.+.+.|++.. +++|||++||+++.+.+ ||+|++|++|++++.|++..+
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l 211 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEEL 211 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999998764 47999999999999875 999999999999999988765
No 313
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=9.7e-37 Score=350.23 Aligned_cols=213 Identities=23% Similarity=0.341 Sum_probs=176.0
Q ss_pred cEEEEEEEEEecCC-------CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChH
Q 000521 1218 LIEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~ 1290 (1446)
.|+++||+++|+.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999521 24699999999999999999999999999999999999999999999999999766666
Q ss_pred hHhcceEEEeCCCC--CCCC-cHHHhcCCC---C-CCC----hHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhH
Q 000521 1291 DLRGRFAVVPQSPF--LFEG-SLRDNLDPF---H-MND----DLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQ 1358 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~--lF~g-TIR~NLdp~---~-~~~----d~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G~~LSgGQ 1358 (1446)
..|++++|+||+|. +++. |+.+|+... + ... ++++.++++.+ |++. .......+||+||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~~LS~G~ 154 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQV---------GLLPDHASYYPHMLAPGQ 154 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHc---------CCChHHHhcCchhcCHHH
Confidence 66778999999985 4444 888887531 1 111 12344444444 4432 2233445799999
Q ss_pred HHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEecc
Q 000521 1359 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFI 1435 (1446)
Q Consensus 1359 rQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~ 1435 (1446)
|||++||||++++|+||||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|.+
T Consensus 155 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 234 (267)
T PRK15112 155 KQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGST 234 (267)
T ss_pred HHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCH
Confidence 999999999999999999999999999999999999998864 37899999999999987 899999999999999887
Q ss_pred chhh
Q 000521 1436 CRYF 1439 (1446)
Q Consensus 1436 ~~~~ 1439 (1446)
..++
T Consensus 235 ~~~~ 238 (267)
T PRK15112 235 ADVL 238 (267)
T ss_pred HHHh
Confidence 6554
No 314
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.7e-37 Score=364.63 Aligned_cols=201 Identities=25% Similarity=0.323 Sum_probs=167.5
Q ss_pred cccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCe----eCCCCChHhHh----cceEEEeCCCCC
Q 000521 1234 AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL----NIINTPVRDLR----GRFAVVPQSPFL 1305 (1446)
Q Consensus 1234 ~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~----di~~i~~~~lR----~~i~~VpQdp~l 1305 (1446)
.+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||. |+...+.+.+| ++++||||++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 5799999999999999999999999999999999999999999999996 67777665543 579999999999
Q ss_pred CC-CcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccC
Q 000521 1306 FE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1381 (1446)
Q Consensus 1306 F~-gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaT 1381 (1446)
|+ .|+++|+.+.. ..+.++.. ....+.++.+||+........+||||||||++|||||+++|+||||||||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~-----~~a~e~le~vgL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPt 192 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERR-----KRVDEQLELVGLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPF 192 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 98 69999997432 11222111 11223333345555455556689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhh
Q 000521 1382 ANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1382 S~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|+||+.+.+.+++.|++..+ ++|+|+|||+++.+. .||||++|++|++++.|++..++
T Consensus 193 s~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 193 SALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 99999999999999987643 799999999999975 59999999999999999987654
No 315
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=343.26 Aligned_cols=206 Identities=26% Similarity=0.415 Sum_probs=175.2
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|+++|++++|+. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 l~~~~l~~~~~~---~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE---FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC---ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 578999999963 38999999999999999999999999999999999999999999999999987654 3789999
Q ss_pred EeCCCCCCC-CcHHHhcCCCC---CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000521 1299 VPQSPFLFE-GSLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1446)
Q Consensus 1299 VpQdp~lF~-gTIR~NLdp~~---~~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1370 (1446)
+||++.+|+ .|+++|+.... ..+ ++++.++++.+ |+...+.....+||+|||||++||||+++
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrl~laral~~ 146 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEML---------GIDHLLNRKPETLSGGEQQRVAIARALVV 146 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc---------CChhHHhcCcccCCHHHHHHHHHHHHHHc
Confidence 999999986 69999996321 111 12233444444 44444555566899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1371 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
+|++++|||||++||.++.+.+.+.+++..+ ++|+|++||+++.+.+ ||+|++|++|++++.|++.++
T Consensus 147 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 217 (235)
T cd03299 147 NPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEV 217 (235)
T ss_pred CCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999987643 8999999999999876 899999999999999886543
No 316
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-37 Score=327.45 Aligned_cols=171 Identities=44% Similarity=0.760 Sum_probs=161.8
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++|++++|+...+++++|+||+|++||.++|+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 47899999997543469999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000521 1299 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1378 (1446)
Q Consensus 1299 VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1378 (1446)
+||+|.+|+.|++||+ ||+|||||++||||++++|++|+||
T Consensus 81 ~~~~~~~~~~t~~e~l---------------------------------------LS~G~~~rl~la~al~~~p~llllD 121 (171)
T cd03228 81 VPQDPFLFSGTIRENI---------------------------------------LSGGQRQRIAIARALLRDPPILILD 121 (171)
T ss_pred EcCCchhccchHHHHh---------------------------------------hCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999997 9999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCE
Q 000521 1379 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGH 1428 (1446)
Q Consensus 1379 EaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ 1428 (1446)
|||++||.++.+.+.+.|++..+++|+|+++|+++.+..||++++|++|+
T Consensus 122 EP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 122 EATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred CCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 99999999999999999988767899999999999998899999999985
No 317
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-36 Score=343.12 Aligned_cols=211 Identities=31% Similarity=0.484 Sum_probs=186.7
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------e
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 669 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-------------~ 669 (1446)
+++|+++.|.... .++++|+||++++|++++|+||||||||||+++|.|+++|++|+|.++| .
T Consensus 2 ~~~~l~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 77 (234)
T cd03251 2 EFKNVTFRYPGDG----PPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQ 77 (234)
T ss_pred EEEEEEEEeCCCC----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhh
Confidence 5788999885321 2359999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCC
Q 000521 670 IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 748 (1446)
Q Consensus 670 i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~ 748 (1446)
++|++|+|++++.|++||+.++.. +.++.+.+..+.+.+.+.++.+|.|.++..+....+||||||||++||||++.+|
T Consensus 78 i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 157 (234)
T cd03251 78 IGLVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDP 157 (234)
T ss_pred EEEeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 899999999999999999998743 3455667777888888889999988888899999999999999999999999999
Q ss_pred CEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHhc
Q 000521 749 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 819 (1446)
Q Consensus 749 ~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1446)
+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 158 ~lllLDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (234)
T cd03251 158 PILILDEATSALDTESERLVQAA-LER-LMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ 226 (234)
T ss_pred CEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc
Confidence 99999999999999999988776 433 3457899999999999988999999999999999998887644
No 318
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-36 Score=346.79 Aligned_cols=216 Identities=28% Similarity=0.370 Sum_probs=179.2
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcC------eeCCCCChH
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDG------LNIINTPVR 1290 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG------~di~~i~~~ 1290 (1446)
..++++|++++|+. +++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+|| .|+.+.+..
T Consensus 9 ~~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 9 DVFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred hheeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 35999999999964 4699999999999999999999999999999999999999986666554 677777778
Q ss_pred hHhcceEEEeCCCCCCCC-cHHHhcCCCC---CC-ChHHHHHHHHHccHHHHHHhCCCc----hhhhcCCCCCChhHHHH
Q 000521 1291 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH---MN-DDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQL 1361 (1446)
Q Consensus 1291 ~lR~~i~~VpQdp~lF~g-TIR~NLdp~~---~~-~d~ei~~aL~~~~L~~~i~~lgLd----t~v~e~G~~LSgGQrQr 1361 (1446)
.+|++++|+||+|.+|.+ |+++|+.... .. .+++.++. +.+..+.+|++ ...+..+..||+|||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qr 161 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKI-----VEECLRKVGLWKEVYDRLNSPASQLSGGQQQR 161 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHH-----HHHHHHHcCCCccchhhhcCCcccCCHHHHHH
Confidence 889999999999999986 9999997431 11 22232221 12222333443 23455667899999999
Q ss_pred HHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhh
Q 000521 1362 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1362 l~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++||||++++|++++|||||++||..+.+.+.+.|++..+++|+|+|||+++.+. .||++++|++|++++.|.+..++
T Consensus 162 l~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~~ 240 (257)
T PRK14246 162 LTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEIF 240 (257)
T ss_pred HHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999988767899999999999995 59999999999999998876554
No 319
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.4e-36 Score=339.90 Aligned_cols=206 Identities=32% Similarity=0.443 Sum_probs=184.8
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|+... +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 77 (221)
T cd03244 2 DIEFKNVSLRYRPNL----PPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLR 77 (221)
T ss_pred cEEEEEEEEecCCCC----cccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHh
Confidence 368899999996321 2469999999999999999999999999999999999999999998876
Q ss_pred -eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccC
Q 000521 669 -SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 747 (1446)
Q Consensus 669 -~i~yv~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~ 747 (1446)
.++|++|+|.+++.|++|||.+......++..+.++..++.+.+..+|.|.++..++.+.+||||||||++||||++.+
T Consensus 78 ~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~ 157 (221)
T cd03244 78 SRISIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRK 157 (221)
T ss_pred hhEEEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcC
Confidence 4899999999999999999987666666777788888999988999999999999999999999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecC
Q 000521 748 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 812 (1446)
Q Consensus 748 ~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 812 (1446)
|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 158 p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 158 SKILVLDEATASVDPETDALIQKT-IRE-AFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 999999999999999999988776 433 345689999999999998999999999999988765
No 320
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=7.4e-37 Score=351.20 Aligned_cols=221 Identities=21% Similarity=0.338 Sum_probs=182.8
Q ss_pred cEEEEEEEEEecCC-------CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh-
Q 000521 1218 LIEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV- 1289 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~- 1289 (1446)
.|+++||+++|+.. ..++++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++..++.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38999999999741 3579999999999999999999999999999999999999999999999999988765
Q ss_pred --HhHhcceEEEeCCCC--CC-CCcHHHhcCCC-CCCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHH
Q 000521 1290 --RDLRGRFAVVPQSPF--LF-EGSLRDNLDPF-HMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLI 1362 (1446)
Q Consensus 1290 --~~lR~~i~~VpQdp~--lF-~gTIR~NLdp~-~~~~d~ei~~aL~~~~L~~~i~~lgLdt-~v~e~G~~LSgGQrQrl 1362 (1446)
..+|++++|+||++. ++ ..|+++|+... ....+ +...-....+.+.++.+|+++ ..+.....||+|||||+
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl 160 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLS--LDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRV 160 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhcc--CCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHH
Confidence 346889999999983 44 36999997431 10000 001111223455566668874 56677778999999999
Q ss_pred HHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1363 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1363 ~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+||||++++|+||||||||++||.++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++...+
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 161 CLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDKL 240 (268)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhcc
Confidence 999999999999999999999999999999999987643 7899999999999985 8999999999999999888765
Q ss_pred h
Q 000521 1440 I 1440 (1446)
Q Consensus 1440 ~ 1440 (1446)
.
T Consensus 241 ~ 241 (268)
T PRK10419 241 T 241 (268)
T ss_pred C
Confidence 3
No 321
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-37 Score=325.30 Aligned_cols=202 Identities=25% Similarity=0.380 Sum_probs=170.3
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------- 668 (1446)
..++++|++-.|+.. ..+|+||||+|++||+++|+|+|||||||||++|.|..+|++|+|.++|
T Consensus 2 ~~i~~~nl~k~yp~~-----~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~l 76 (258)
T COG3638 2 MMIEVKNLSKTYPGG-----HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKEL 76 (258)
T ss_pred ceEEEeeeeeecCCC-----ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHH
Confidence 358899999999743 3359999999999999999999999999999999999999999999886
Q ss_pred -----eEEEEcCCCCCCCc-cHHHHHhcCCC------------CChhhHHHHHH---HhcchHHHhhccCCCcccccCCC
Q 000521 669 -----SIAYVPQVPWILSG-TIRDNILFGKN------------YDPQSYSETLK---ACTLDVDISLMVGGDMAYIGEKG 727 (1446)
Q Consensus 669 -----~i~yv~Q~p~l~~~-ti~~nI~~g~~------------~~~~~~~~v~~---~~~l~~di~~~~~gd~t~ig~~g 727 (1446)
+|||++|++.|.+. ||.+|++.|+- +.++....+++ ..++.+ ..-.+.
T Consensus 77 r~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~-----------~A~qra 145 (258)
T COG3638 77 RKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILD-----------KAYQRA 145 (258)
T ss_pred HHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHH-----------HHHHHh
Confidence 59999999998865 99999997742 33444444443 333322 223466
Q ss_pred CccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-hCCEEEEEeCCE
Q 000521 728 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQ 806 (1446)
Q Consensus 728 ~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~ 806 (1446)
.+|||||+|||+|||||+++|+|+|-|||+++|||.+++++++.+..-....|.|+|+.-|++++.. +||||+-|++|+
T Consensus 146 ~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ 225 (258)
T COG3638 146 STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGR 225 (258)
T ss_pred ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCc
Confidence 7999999999999999999999999999999999999999998744332456889999999999865 599999999999
Q ss_pred EEEecChhHHH
Q 000521 807 VKWIGSSADLA 817 (1446)
Q Consensus 807 i~~~g~~~~l~ 817 (1446)
|+..|+.+|+.
T Consensus 226 ivfDg~~~el~ 236 (258)
T COG3638 226 IVFDGPASELT 236 (258)
T ss_pred EEEeCChhhhh
Confidence 99999998864
No 322
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-36 Score=326.65 Aligned_cols=170 Identities=32% Similarity=0.556 Sum_probs=157.5
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGK--KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 478999999964 36999999999999999999999999999999999999999999999999998766 677899999
Q ss_pred EeCCCCCCCC-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000521 1299 VPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1377 (1446)
Q Consensus 1299 VpQdp~lF~g-TIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1377 (1446)
+||+|.+|.+ |+++|+. ||+|||||++||||++++|+|++|
T Consensus 78 ~~q~~~~~~~~tv~~~~~--------------------------------------LS~G~~qrv~laral~~~p~illl 119 (173)
T cd03230 78 LPEEPSLYENLTVRENLK--------------------------------------LSGGMKQRLALAQALLHDPELLIL 119 (173)
T ss_pred EecCCccccCCcHHHHhh--------------------------------------cCHHHHHHHHHHHHHHcCCCEEEE
Confidence 9999999887 9999973 999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHh-hcCEEEEEeCCEE
Q 000521 1378 DECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHL 1429 (1446)
Q Consensus 1378 DEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~~G~v 1429 (1446)
||||++||..+.+.+.+.|++.. ++.|+|++||+.+.+. .||+|++|++|++
T Consensus 120 DEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 120 DEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 99999999999999999998764 4689999999999888 5899999999974
No 323
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.2e-37 Score=338.10 Aligned_cols=203 Identities=30% Similarity=0.412 Sum_probs=175.1
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.+.++|.+|.|+.. .++|+|+||++++|+.++|+|+||||||||++.+.|.++|++|.|.++|
T Consensus 3 ~i~~~~l~~~y~~~-----~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~ 77 (235)
T COG1122 3 MIEAENLSFRYPGR-----KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLEL 77 (235)
T ss_pred eEEEEEEEEEcCCC-----ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHh
Confidence 46789999999753 3459999999999999999999999999999999999999999998866
Q ss_pred --eEEEEcCCC--CCCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 --SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 --~i~yv~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
++|||.|+| .++..||.|.+.||.. .++ ++.+++++.|++.+..+. ...+||||||||
T Consensus 78 ~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r-----------~p~~LSGGqkqR 146 (235)
T COG1122 78 RQKVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDR-----------PPFNLSGGQKQR 146 (235)
T ss_pred hcceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccC-----------CccccCCcceee
Confidence 399999999 6899999999999853 333 456778888888765443 345899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHH
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 816 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 816 (1446)
||||.+|..+|++++||||||+||+...+.+++.+..-....++|+|++||+++.+.. ||++++|++|+++.+|++.++
T Consensus 147 vaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i 226 (235)
T COG1122 147 VAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEI 226 (235)
T ss_pred HHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHH
Confidence 9999999999999999999999999999999886332212336899999999999876 999999999999999999887
Q ss_pred Hhc
Q 000521 817 AVS 819 (1446)
Q Consensus 817 ~~~ 819 (1446)
.+.
T Consensus 227 ~~~ 229 (235)
T COG1122 227 FND 229 (235)
T ss_pred hhh
Confidence 653
No 324
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.2e-36 Score=347.08 Aligned_cols=211 Identities=22% Similarity=0.370 Sum_probs=173.8
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC----CCceEEEcCeeCCCCChHhHh
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI----CGGQILVDGLNIINTPVRDLR 1293 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~----~~G~I~IDG~di~~i~~~~lR 1293 (1446)
.++++|++++| + .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..+
T Consensus 4 ~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 58999999999 2 3699999999999999999999999999999999999999 999999999998632 2234
Q ss_pred cceEEEeCCCC-CCC--CcHHHhcCC----CC-CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000521 1294 GRFAVVPQSPF-LFE--GSLRDNLDP----FH-MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1365 (1446)
Q Consensus 1294 ~~i~~VpQdp~-lF~--gTIR~NLdp----~~-~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1365 (1446)
++++|+||+|. .|. .|+.+|+.. .+ ...+++++++++.+++.+. ++.++.....||+|||||++||
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~~~~~LS~Gq~qrv~la 152 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA------ARVLKLYPFEMSGGMLQRMMIA 152 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh------hhhhhcCCcccCHHHHHHHHHH
Confidence 67999999985 343 477777532 11 1223445555555443221 1245666778999999999999
Q ss_pred HHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||++++|+||||||||++||.++.+.+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|++|++++.|++.+++
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 153 LALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999987643 7899999999999865 8999999999999999987664
No 325
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-36 Score=341.35 Aligned_cols=209 Identities=31% Similarity=0.482 Sum_probs=184.9
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------e
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 669 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-------------~ 669 (1446)
+++|+++.|+.. ..+++|+||+|++|++++|+||||||||||+++|.|+.+|++|+|.++| .
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~ 76 (236)
T cd03253 2 EFENVTFAYDPG-----RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRA 76 (236)
T ss_pred EEEEEEEEeCCC-----CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhh
Confidence 578899988531 2359999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCC
Q 000521 670 IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 748 (1446)
Q Consensus 670 i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~ 748 (1446)
++|++|+|++++.|++||+.++.. ...+...+.++.+++.+.+..+|.|.++.++.+..+||||||||++||||++.+|
T Consensus 77 i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p 156 (236)
T cd03253 77 IGVVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNP 156 (236)
T ss_pred EEEECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 899999999999999999998753 3344456677888898888999999999999999999999999999999999999
Q ss_pred CEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHh
Q 000521 749 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 749 ~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+.+.+..||++++|++|++.+.|+.+++..
T Consensus 157 ~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~ 224 (236)
T cd03253 157 PILLLDEATSALDTHTEREIQAA-LRD-VSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLA 224 (236)
T ss_pred CEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999988876 333 334789999999999998899999999999999998887754
No 326
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.3e-36 Score=348.62 Aligned_cols=214 Identities=25% Similarity=0.370 Sum_probs=178.1
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEEcCeeCCCC-----Ch
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC---GGQILVDGLNIINT-----PV 1289 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~---~G~I~IDG~di~~i-----~~ 1289 (1446)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +.
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 4899999999963 46999999999999999999999999999999999999886 49999999998654 34
Q ss_pred HhHhcceEEEeCCCCCCCC-cHHHhcCCCCCC-----------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChh
Q 000521 1290 RDLRGRFAVVPQSPFLFEG-SLRDNLDPFHMN-----------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVG 1357 (1446)
Q Consensus 1290 ~~lR~~i~~VpQdp~lF~g-TIR~NLdp~~~~-----------~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgG 1357 (1446)
..+|++++|+||++.+|++ |+++|+...... .+++. +....+.++.+|++.........||+|
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G 156 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQ-----KQRALQALTRVGMVHFAHQRVSTLSGG 156 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHH-----HHHHHHHHHHcCCHHHHhCCccccCHH
Confidence 5678899999999998875 999999643110 00110 111233444446655556667789999
Q ss_pred HHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEec
Q 000521 1358 QRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLVCISF 1434 (1446)
Q Consensus 1358 QrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~ 1434 (1446)
||||++||||++.+|++|||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|+
T Consensus 157 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~ 236 (262)
T PRK09984 157 QQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGS 236 (262)
T ss_pred HHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998764 3789999999999865 599999999999999998
Q ss_pred cchh
Q 000521 1435 ICRY 1438 (1446)
Q Consensus 1435 ~~~~ 1438 (1446)
+..+
T Consensus 237 ~~~~ 240 (262)
T PRK09984 237 SQQF 240 (262)
T ss_pred HHHh
Confidence 8764
No 327
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-36 Score=327.45 Aligned_cols=172 Identities=33% Similarity=0.510 Sum_probs=159.2
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCC--hHhHhcce
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--VRDLRGRF 1296 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~--~~~lR~~i 1296 (1446)
|+++|++++|+. .++++|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ....|+.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999964 46999999999999999999999999999999999999999999999999998876 56788999
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1375 (1446)
+|+||+|.+|.+ |+++|+... ||+|||||++||||++++|+++
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~------------------------------------lS~G~~qr~~la~al~~~p~ll 122 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG------------------------------------LSGGQQQRVALARALAMDPDVL 122 (178)
T ss_pred EEEecCCccCCCCCHHHheeec------------------------------------CCHHHHHHHHHHHHHHCCCCEE
Confidence 999999998865 999998643 9999999999999999999999
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCE
Q 000521 1376 CLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGH 1428 (1446)
Q Consensus 1376 lLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~ 1428 (1446)
+|||||++||..+.+.+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 123 ilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 123 LLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 99999999999999999999987654 6899999999999985 89999999985
No 328
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=2.1e-33 Score=338.95 Aligned_cols=452 Identities=15% Similarity=0.177 Sum_probs=316.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCh--h---HHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHH
Q 000521 333 TQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSD--G---EIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVAL 406 (1446)
Q Consensus 333 ~~~~~~~~r~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~--g---~i~nlms~D~~~i~~~~~-~~~~~~~~pl~i~i~~ 406 (1446)
....|...++..+.|..|...+.+|-|.-....+-.... + ..-..+..|+..+.+... ....+..+.+.++.-.
T Consensus 104 v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~ 183 (604)
T COG4178 104 VAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFT 183 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 346677889999999999999999999877543322111 1 122477888877766443 3344445555555545
Q ss_pred HHHhhHhH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCc
Q 000521 407 YLLYTQVK---------------FAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGW 471 (1446)
Q Consensus 407 ~lL~~~lg---------------~a~l~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~ 471 (1446)
..||...| ..+.+.++.+++...+..+++|...+...+..+.-..--.....+..+...|-+|+.
T Consensus 184 ~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~G 263 (604)
T COG4178 184 GILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRG 263 (604)
T ss_pred HHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcC
Confidence 56664333 222222222233333333444444443333333333333455678889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHH
Q 000521 472 EQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPT---LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSF 548 (1446)
Q Consensus 472 e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~---~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l 548 (1446)
|+...+++++.-..=++..++......-...+...... +++.+ .++-.+..+.++.|.+.++-..|+.+...++.+
T Consensus 264 E~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~l-i~ap~~f~g~i~~G~lmqa~~aF~~v~sslswf 342 (604)
T COG4178 264 EKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPIL-IAAPRYFSGQITFGGLMQAVGAFGQVHSSLSWF 342 (604)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHH-hccHhhhcCcChHHHHHHHHHHHHHHHHHHHHH
Confidence 99888777765444444333322221111111111111 11111 111224577899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCC---CchhhhhhcCCCCcccCCCccC-CCCCceEEEEecEEEecCCCcccccccce
Q 000521 549 PWVINGLIDAFISIRRLTRFLGCSE---YKHELEQAANSPSYISNGLSNF-NSKDMAVIMQDATCSWYCNNEEEQNVVLN 624 (1446)
Q Consensus 549 ~~~i~~~~~a~~s~~RI~~fL~~~e---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~f~w~~~~~~~~~~~l~ 624 (1446)
...++.+.+=+++..|+.+|-..-+ .++.... .. ...... +..+..|.++|++..-+.. ...++
T Consensus 343 i~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~----~~---~~~~~~~~~~~~~i~~~nl~l~~p~~-----~~ll~ 410 (604)
T COG4178 343 IDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPA----RT---GRRIDFDDNADHGITLENLSLRTPDG-----QTLLS 410 (604)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccC----cc---cccccccccccceeEEeeeeEECCCC-----Ceeec
Confidence 9999999999999999999985322 1111000 00 000000 1115789999999986543 24599
Q ss_pred eeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEe-C-eEEEEcCCCCCCCccHHHHHhcCC---CCChhhH
Q 000521 625 QVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHAS-G-SIAYVPQVPWILSGTIRDNILFGK---NYDPQSY 699 (1446)
Q Consensus 625 ~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~-~-~i~yv~Q~p~l~~~ti~~nI~~g~---~~~~~~~ 699 (1446)
+.||++++|+-+.|.|+||||||||+++|.|..|--+|+|... + .+-|+||.|.+..||.||-|++.. +++++.+
T Consensus 411 ~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l 490 (604)
T COG4178 411 ELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAEL 490 (604)
T ss_pred cceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHH
Confidence 9999999999999999999999999999999999999999886 3 489999999999999999999864 2778999
Q ss_pred HHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccC
Q 000521 700 SETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML 779 (1446)
Q Consensus 700 ~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~ 779 (1446)
.+++..|+|.+-.+.+.+-+ .=...||||||||+++||.++++|++++|||.|||||++++..+++. +.. .+.
T Consensus 491 ~~vL~~vgL~~L~~rl~~~~-----~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~-l~~-~lp 563 (604)
T COG4178 491 VAVLHKVGLGDLAERLDEED-----RWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQL-LKE-ELP 563 (604)
T ss_pred HHHHHHcCcHHHHHHHhccC-----cHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHH-HHh-hCC
Confidence 99999999998888765432 23457999999999999999999999999999999999999999987 444 467
Q ss_pred CceEEEEccCcchhhhCCEEEEEeC
Q 000521 780 QKTRILCTHNVQAISAADMVVVMDK 804 (1446)
Q Consensus 780 ~~t~ilvth~~~~l~~ad~i~~l~~ 804 (1446)
+.|+|-|.|+.......++.+.+.+
T Consensus 564 ~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 564 DATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred CCEEEEeccchhhHHHHhhheeecc
Confidence 8899999999998887777666643
No 329
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-36 Score=337.81 Aligned_cols=204 Identities=25% Similarity=0.396 Sum_probs=170.4
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCC----ChHhHhc
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRDLRG 1294 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~~lR~ 1294 (1446)
+++ |++++|+.. .+ |+||+|++ |.+||+|+||||||||+++|.|+++|++|+|.+||.++... +...+|+
T Consensus 2 ~~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 75 (214)
T cd03297 2 LCV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQR 75 (214)
T ss_pred cee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhh
Confidence 355 899999753 34 99999999 99999999999999999999999999999999999998643 3445788
Q ss_pred ceEEEeCCCCCCCC-cHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1295 RFAVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1295 ~i~~VpQdp~lF~g-TIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
+++|+||++.+|++ |+++|+..... ..+++ .+....+.++.+|++.........||||||||++||||++++|
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (214)
T cd03297 76 KIGLVFQQYALFPHLNVRENLAFGLKRKRNRE-----DRISVDELLDLLGLDHLLNRYPAQLSGGEKQRVALARALAAQP 150 (214)
T ss_pred cEEEEecCCccCCCCCHHHHHHHHHhhCCHHH-----HHHHHHHHHHHcCCHhHhhcCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999864 99999974321 11111 1112334455557776667777889999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEe
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~ 1433 (1446)
++|+|||||++||.++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 151 ELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999987642 7899999999999864 8999999999998865
No 330
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.7e-36 Score=341.42 Aligned_cols=211 Identities=30% Similarity=0.482 Sum_probs=184.7
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------e
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 669 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-------------~ 669 (1446)
+++|+++.|+.... .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 2 ~i~~l~~~~~~~~~---~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (238)
T cd03249 2 EFKNVSFRYPSRPD---VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQ 78 (238)
T ss_pred eEEEEEEecCCCCC---ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhh
Confidence 57889998854211 2459999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCC
Q 000521 670 IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 748 (1446)
Q Consensus 670 i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~ 748 (1446)
++|++|+|++++.|++||+.++.. ...+...+.++.+++.+.+..+|.|.++..+....+||||||||++||||++.+|
T Consensus 79 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p 158 (238)
T cd03249 79 IGLVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNP 158 (238)
T ss_pred EEEECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCC
Confidence 999999999998999999998743 2344556677778888888899999888889999999999999999999999999
Q ss_pred CEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHh
Q 000521 749 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 749 ~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+.+++..
T Consensus 159 ~llllDEP~~gLD~~~~~~l~~~-l~~-~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (238)
T cd03249 159 KILLLDEATSALDAESEKLVQEA-LDR-AMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMA 226 (238)
T ss_pred CEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhh
Confidence 99999999999999999988876 433 236789999999999988999999999999999998877653
No 331
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-37 Score=334.12 Aligned_cols=210 Identities=28% Similarity=0.379 Sum_probs=177.0
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCe---eCCCCChHhHhc
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL---NIINTPVRDLRG 1294 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~---di~~i~~~~lR~ 1294 (1446)
.|+++|++..|+. .++++|||++|+.||.+|+.||||||||||+.+|.|+..|++|+|.+||. |.++++.+ .+
T Consensus 2 ~i~i~~~~~~~~~--~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~--~R 77 (345)
T COG1118 2 SIRINNVKKRFGA--FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVR--DR 77 (345)
T ss_pred ceeehhhhhhccc--ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchh--hc
Confidence 3788899888864 36899999999999999999999999999999999999999999999999 77774443 36
Q ss_pred ceEEEeCCCCCCC-CcHHHhcCCCCCC-----ChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000521 1295 RFAVVPQSPFLFE-GSLRDNLDPFHMN-----DDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1364 (1446)
Q Consensus 1295 ~i~~VpQdp~lF~-gTIR~NLdp~~~~-----~d~----ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1364 (1446)
+||+|.||.-||. .||++|+.++-+. ++. ++.+.|+.|+| +-.-.....+||||||||+||
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL---------~~la~ryP~QLSGGQrQRVAL 148 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQL---------EGLADRYPAQLSGGQRQRVAL 148 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcc---------cchhhcCchhcChHHHHHHHH
Confidence 7999999999997 4999999876421 222 33333444443 333334567899999999999
Q ss_pred HHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhhh
Q 000521 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYFI 1440 (1446)
Q Consensus 1365 ARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~~ 1440 (1446)
||||...|++|+||||.++||.+-.+.+++-+++.. -++|+++|||+.+...+ ||||+||++|+|...|+|...|.
T Consensus 149 ARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~ 227 (345)
T COG1118 149 ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYD 227 (345)
T ss_pred HHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhc
Confidence 999999999999999999999999999999888754 38999999999998765 99999999999999999988764
No 332
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-36 Score=359.23 Aligned_cols=207 Identities=24% Similarity=0.369 Sum_probs=175.8
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCC----ChHhHhc
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRDLRG 1294 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~~lR~ 1294 (1446)
|++ |++++|... .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +....|+
T Consensus 2 l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 999999642 23 99999999999999999999999999999999999999999999998753 2445688
Q ss_pred ceEEEeCCCCCCC-CcHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1295 RFAVVPQSPFLFE-GSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1295 ~i~~VpQdp~lF~-gTIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
+++|+||++.+|+ .|+++|+.+... ..++++.++++.+ |++........+||||||||++|||||+++|
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~---------gl~~~~~~~~~~LSgGq~qRvalaraL~~~p 147 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALL---------GIEPLLDRYPGSLSGGEKQRVAIGRALLTAP 147 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHc---------CCchhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 9999999999997 499999975422 2233444444444 5555555666789999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++||||||||+||..+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|..++
T Consensus 148 ~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~ 217 (352)
T PRK11144 148 ELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVW 217 (352)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHH
Confidence 99999999999999999999999987653 7899999999998865 8999999999999999987664
No 333
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.6e-36 Score=337.96 Aligned_cols=203 Identities=31% Similarity=0.389 Sum_probs=172.5
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ++++++
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEEE
Confidence 478999999964 46999999999999999999999999999999999999999999999999876422 357999
Q ss_pred EeCCCCCCC-CcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1299 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1299 VpQdp~lF~-gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+||++.+|. .|+++|+.++. ..+++++.++++..+ ++........+||+|||||++||||++++|++
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~---------l~~~~~~~~~~LS~G~~~rv~laral~~~p~l 145 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVD---------LTNTGKKKAKQFSLGMKQRLGIAIALLNHPKL 145 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcC---------CcHHHhhhHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999886 59999986421 223445555555554 44334444567999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccc
Q 000521 1375 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVCISFIC 1436 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~ 1436 (1446)
|+|||||++||.++.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|.+.
T Consensus 146 lllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 209 (223)
T TIGR03740 146 LILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKIN 209 (223)
T ss_pred EEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChh
Confidence 99999999999999999999998764 4789999999999986 49999999999999988764
No 334
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=9.2e-37 Score=359.91 Aligned_cols=188 Identities=28% Similarity=0.382 Sum_probs=159.4
Q ss_pred ccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------------eEEEEcCCCCCCCc-
Q 000521 621 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILSG- 682 (1446)
Q Consensus 621 ~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------------~i~yv~Q~p~l~~~- 682 (1446)
.+|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++| .++||+|++++++.
T Consensus 7 ~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~ 86 (363)
T TIGR01186 7 KGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHM 86 (363)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCC
Confidence 359999999999999999999999999999999999999999999876 49999999999975
Q ss_pred cHHHHHhcCCCC---Ch-hh---HHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcC
Q 000521 683 TIRDNILFGKNY---DP-QS---YSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDD 755 (1446)
Q Consensus 683 ti~~nI~~g~~~---~~-~~---~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDe 755 (1446)
||+|||.|+.++ +. ++ ..++++..+|+. ..+....+|||||||||+|||||+.+|+++||||
T Consensus 87 TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~-----------~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 87 TILQNTSLGPELLGWPEQERKEKALELLKLVGLEE-----------YEHRYPDELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCch-----------hhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 999999986432 22 23 334444444433 2455667999999999999999999999999999
Q ss_pred CcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-hCCEEEEEeCCEEEEecChhHHHhc
Q 000521 756 VLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 819 (1446)
Q Consensus 756 p~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1446)
|||+||+.+.+++.+.+.......++|+|+|||+++++. .||+|++|++|++++.|+++++..+
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999998754321234789999999999864 5999999999999999999998754
No 335
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.9e-36 Score=358.74 Aligned_cols=208 Identities=24% Similarity=0.384 Sum_probs=174.8
Q ss_pred EEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCC----hHhHhcceEE
Q 000521 1223 NVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP----VRDLRGRFAV 1298 (1446)
Q Consensus 1223 nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~----~~~lR~~i~~ 1298 (1446)
|++++|+.. .+ |+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+ ....|+++++
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 899999642 34 999999999999999999999999999999999999999999999987542 3456889999
Q ss_pred EeCCCCCCCC-cHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000521 1299 VPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1376 (1446)
Q Consensus 1299 VpQdp~lF~g-TIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1376 (1446)
+||++.+|++ |+++|+.+... ....+. .....+.++.+|++...+.....||||||||++|||||+++|++|+
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~-----~~~~~~~l~~~gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~lll 154 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSER-----RISFERVIELLGIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRLLL 154 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHH-----HHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999986 99999975322 111111 1112334444577766677777899999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1377 LDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1377 LDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|||||++||..+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|.+..++
T Consensus 155 LDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 220 (354)
T TIGR02142 155 MDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVW 220 (354)
T ss_pred EcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHh
Confidence 9999999999999999999987643 7899999999999875 8999999999999999887654
No 336
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.5e-36 Score=344.84 Aligned_cols=215 Identities=21% Similarity=0.339 Sum_probs=178.6
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCee-----CCCCChHh-
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN-----IINTPVRD- 1291 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~d-----i~~i~~~~- 1291 (1446)
.|+++||+++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +...+..+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGG--GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCC--ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 4899999999964 358999999999999999999999999999999999999999999999988 77766553
Q ss_pred ---HhcceEEEeCCCC--C-CCCcHHHhcCC----CCCCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHH
Q 000521 1292 ---LRGRFAVVPQSPF--L-FEGSLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQ 1360 (1446)
Q Consensus 1292 ---lR~~i~~VpQdp~--l-F~gTIR~NLdp----~~~~~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~~LSgGQrQ 1360 (1446)
+++.++++||+|. + +..|+.+|+.. .......+. ...+.+.++.+|++ +..+.....|||||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~q 155 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNI-----RAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQ 155 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHH-----HHHHHHHHHHcCCChhhhhcCchhcCHHHHH
Confidence 3467999999985 2 33588888731 111111111 12334556666775 5677778899999999
Q ss_pred HHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccch
Q 000521 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1361 rl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
|++|||||+++|++|+|||||++||..+.+.+.+.|++.. .+.|+|+|+|+++.+.. ||++++|++|++++.|.+..
T Consensus 156 rv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~~~~ 235 (253)
T TIGR02323 156 RLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGLTDQ 235 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999999998764 37899999999999985 89999999999999998876
Q ss_pred hh
Q 000521 1438 YF 1439 (1446)
Q Consensus 1438 ~~ 1439 (1446)
++
T Consensus 236 ~~ 237 (253)
T TIGR02323 236 VL 237 (253)
T ss_pred Hh
Confidence 54
No 337
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-36 Score=357.39 Aligned_cols=202 Identities=28% Similarity=0.422 Sum_probs=169.9
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------e
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 669 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------~ 669 (1446)
.++++|+++.|+.+ ..+|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++| .
T Consensus 3 ~l~i~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ 77 (356)
T PRK11650 3 GLKLQAVRKSYDGK-----TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRD 77 (356)
T ss_pred EEEEEeEEEEeCCC-----CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCC
Confidence 37889999998421 2359999999999999999999999999999999999999999999987 4
Q ss_pred EEEEcCCCCCCC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000521 670 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1446)
Q Consensus 670 i~yv~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lA 741 (1446)
||||+|++.+|+ .||+|||.|+.. .+. ++.+++++..+|+.... ....+|||||||||+||
T Consensus 78 ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~QRvalA 146 (356)
T PRK11650 78 IAMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLD-----------RKPRELSGGQRQRVAMG 146 (356)
T ss_pred EEEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhh-----------CChhhCCHHHHHHHHHH
Confidence 999999999996 599999998743 222 34556667677754433 34468999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhh-hCCEEEEEeCCEEEEecChhHHHhc
Q 000521 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 819 (1446)
Q Consensus 742 Raly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1446)
|||+.+|+++|||||||+||+.+.+++.+.+ ..-. ..+.|+|+|||+.+.+. .||+|++|++|++++.|+++++...
T Consensus 147 RAL~~~P~llLLDEP~s~LD~~~r~~l~~~l-~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 147 RAIVREPAVFLFDEPLSNLDAKLRVQMRLEI-QRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 9999999999999999999999999888763 3212 23789999999998765 5999999999999999999998654
No 338
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-36 Score=331.85 Aligned_cols=190 Identities=23% Similarity=0.322 Sum_probs=161.9
Q ss_pred cEEEEEEEEEecCC--CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC---CCCceEEEcCeeCCCCChHhH
Q 000521 1218 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDL 1292 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~l 1292 (1446)
.+.++||+|.|+.. ..++|+|+||+|++||++||+|++|||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 47899999999753 4579999999999999999999999999999999999999 89999999999998765 457
Q ss_pred hcceEEEeCCCCCCCC-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000521 1293 RGRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1371 (1446)
Q Consensus 1293 R~~i~~VpQdp~lF~g-TIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1371 (1446)
|++++|+||++.+|.+ |+++|+.+.... . .+ +....||+|||||++||||++++
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~---------~------------~~----~~~~~LS~Ge~qrl~laral~~~ 136 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC---------K------------GN----EFVRGISGGERKRVSIAEALVSR 136 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh---------c------------cc----cchhhCCHHHHHHHHHHHHHhhC
Confidence 8899999999988875 999999643110 0 12 23346999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEecc-CchhH-hhcCEEEEEeCCEEEEEe
Q 000521 1372 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAH-RISTV-LNMDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1372 ~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaH-rl~ti-~~~DrIlvl~~G~vvE~~ 1433 (1446)
|++|+|||||++||.++.+.+.+.|++..+ ++|+|+++| +.+.+ ..||+|++|++|++++.|
T Consensus 137 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 137 ASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 999999999999999999999999987643 567666654 55666 458999999999998764
No 339
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.9e-36 Score=327.79 Aligned_cols=172 Identities=30% Similarity=0.506 Sum_probs=156.4
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh-HhHhcce
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRF 1296 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i 1296 (1446)
.++++|++++| +|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+. +..|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999998 8999999999999999999999999999999999999999999999999988764 4568899
Q ss_pred EEEeCCC---CC-CCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1297 AVVPQSP---FL-FEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1297 ~~VpQdp---~l-F~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
+|+||+| .+ +..|++||+.+... ||+|||||++||||++++|
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~----------------------------------LS~G~~qrl~la~al~~~p 123 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL----------------------------------LSGGNQQKVVLARWLARDP 123 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh----------------------------------cCHHHHHHHHHHHHHccCC
Confidence 9999995 34 45799999864310 9999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEE
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1429 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~v 1429 (1446)
++|+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++
T Consensus 124 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 124 RVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999998764 47999999999999977 899999999975
No 340
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=2.3e-36 Score=330.26 Aligned_cols=182 Identities=29% Similarity=0.442 Sum_probs=161.1
Q ss_pred cEEEEEEEEEecCC----CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCC--CCCCceEEEcCeeCCCCChHh
Q 000521 1218 LIEFQNVTMRYKPS----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRD 1291 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~----~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~ 1291 (1446)
.|+++||+++|+.. ..++|+|+||+|++||+++|+|++|||||||+++|.|++ +|++|+|.+||.++.. ..
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 48999999999752 256999999999999999999999999999999999999 9999999999999875 36
Q ss_pred HhcceEEEeCCCCCCCC-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000521 1292 LRGRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1370 (1446)
Q Consensus 1292 lR~~i~~VpQdp~lF~g-TIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1370 (1446)
+|++++++||++.+|.+ |+++|+.... . +. .||+|||||++||||+++
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~~------------~-----------~~--------~LS~G~~qrv~laral~~ 128 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFAA------------K-----------LR--------GLSGGERKRVSIALELVS 128 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHHH------------H-----------hc--------cCCHHHHHHHHHHHHHHc
Confidence 78899999999998875 9999984210 0 00 699999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCch-hHh-hcCEEEEEeCCEEEEEe
Q 000521 1371 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIS-TVL-NMDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1371 ~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~-ti~-~~DrIlvl~~G~vvE~~ 1433 (1446)
+|++++|||||++||..+.+.+.+.|++.. +++|+|+|+|+++ .+. .||+|++|++|++++.|
T Consensus 129 ~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 129 NPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 999999999999999999999999998764 4899999999997 454 48999999999998764
No 341
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=7.1e-36 Score=333.92 Aligned_cols=205 Identities=34% Similarity=0.467 Sum_probs=180.5
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|... . .++++|+||++++|++++|+||||||||||+++|.|+.+|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~-~---~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~ 77 (220)
T cd03245 2 RIEFRNVSFSYPNQ-E---IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLR 77 (220)
T ss_pred eEEEEEEEEEcCCC-C---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHH
Confidence 36789999998532 1 2359999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHcc
Q 000521 669 -SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 746 (1446)
Q Consensus 669 -~i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~ 746 (1446)
.++|++|+|++++.|++||+.++.. .++++..+.++.+++.+.++..|.|.+|.+.....+||||||||++||||+..
T Consensus 78 ~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~ 157 (220)
T cd03245 78 RNIGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLN 157 (220)
T ss_pred hhEEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhc
Confidence 3899999999998999999988643 34556778888899988889999999999999999999999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEec
Q 000521 747 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 747 ~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g 811 (1446)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 158 ~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 158 DPPILLLDEPTSAMDMNSEERLKER-LRQ-LLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999988876 333 33448999999999988789999999999997653
No 342
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-36 Score=351.42 Aligned_cols=209 Identities=27% Similarity=0.427 Sum_probs=171.5
Q ss_pred CCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC---------
Q 000521 598 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------- 668 (1446)
Q Consensus 598 ~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~--------- 668 (1446)
.+..++++|++|.|+.... ...++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 18 ~~~~l~~~nl~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~ 96 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQE-NELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNN 96 (320)
T ss_pred CCceEEEEeEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccc
Confidence 3457899999999964211 113469999999999999999999999999999999999999999998863
Q ss_pred --------------------eEEEEcCCC--CCCCccHHHHHhcCCC---CChh----hHHHHHHHhcchHHHhhccCCC
Q 000521 669 --------------------SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGD 719 (1446)
Q Consensus 669 --------------------~i~yv~Q~p--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd 719 (1446)
.|+||+|+| ++++.||+|||.|+.. .+++ +.++.++.+++..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~--------- 167 (320)
T PRK13631 97 HELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD--------- 167 (320)
T ss_pred ccccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh---------
Confidence 279999998 7899999999998742 2222 2333444444432
Q ss_pred cccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-hCCE
Q 000521 720 MAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADM 798 (1446)
Q Consensus 720 ~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~ 798 (1446)
...++.+.+||||||||++|||||..+|+++||||||++||+.+.+.+++. +.....+++|+|++||+++.+. .||+
T Consensus 168 -~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~-L~~l~~~g~TiiivtHd~~~~~~~adr 245 (320)
T PRK13631 168 -SYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQL-ILDAKANNKTVFVITHTMEHVLEVADE 245 (320)
T ss_pred -hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCE
Confidence 234667889999999999999999999999999999999999999998876 3321235789999999999875 5999
Q ss_pred EEEEeCCEEEEecChhHHHh
Q 000521 799 VVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 799 i~~l~~G~i~~~g~~~~l~~ 818 (1446)
|++|++|++++.|+++++..
T Consensus 246 i~vl~~G~i~~~g~~~~~~~ 265 (320)
T PRK13631 246 VIVMDKGKILKTGTPYEIFT 265 (320)
T ss_pred EEEEECCEEEEeCCHHHHhc
Confidence 99999999999999998754
No 343
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-37 Score=313.65 Aligned_cols=212 Identities=26% Similarity=0.403 Sum_probs=181.2
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
+++.+++.+|++ ...+++||||+++.||.+||.|++||||||+++.|..++.|++|.|+|||+|+..-| ...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p-~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDP-SFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccCh-HHHhhhcce
Confidence 688999999976 335899999999999999999999999999999999999999999999999998755 567999999
Q ss_pred EeCCCCCCC-CcHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1299 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1299 VpQdp~lF~-gTIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
++-+.-++. -|.||||.+|+. .++.++. +...+..+.++++..+..+-.+||-|+|||++|||||.++|+|
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~k-----ari~~l~k~l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i 154 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIK-----ARIAELSKRLQLLEYLDRRVGEFSTGMKQKVAIARALVHDPSI 154 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHH-----HHHHHHHHHhChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCe
Confidence 997777775 499999988753 2333332 2233334444555555555557999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccch
Q 000521 1375 LCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVL-NMDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~~-~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
++||||||+||..+.+.+++-|++... +++||+-||-++.++ -||||+++.+|+++..|++..
T Consensus 155 ~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~ 219 (245)
T COG4555 155 LVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEA 219 (245)
T ss_pred EEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHH
Confidence 999999999999999999999987654 999999999999998 699999999999999998764
No 344
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.9e-36 Score=354.00 Aligned_cols=203 Identities=28% Similarity=0.355 Sum_probs=168.6
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|+++.|+.... ..++|+|+||+|++||+++|+||||||||||+++|.|+.+|++|+|.++|
T Consensus 2 I~~~~lsk~y~~~~~--~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~ 79 (343)
T TIGR02314 2 IKLSNITKVFHQGTK--TIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTK 79 (343)
T ss_pred EEEEEEEEEECCCCc--ceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHH
Confidence 678999999963211 12469999999999999999999999999999999999999999999875
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
.|||++|++.+++ .|++|||.++.. .+. ++..++++..+|.+. ......+||||||||
T Consensus 80 ~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~-----------~~~~~~~LSgGqkQR 148 (343)
T TIGR02314 80 ARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDK-----------HDSYPSNLSGGQKQR 148 (343)
T ss_pred HhcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 4899999999985 699999987532 222 234455555555432 234556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhH
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 815 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 815 (1446)
|+|||||..+|+++|||||||+||+.+.+.+++. +..-.. .+.|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 149 V~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~l-L~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~ 227 (343)
T TIGR02314 149 VAIARALASNPKVLLCDEATSALDPATTQSILEL-LKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSE 227 (343)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999999876 332112 37899999999999865 99999999999999999999
Q ss_pred HHh
Q 000521 816 LAV 818 (1446)
Q Consensus 816 l~~ 818 (1446)
+..
T Consensus 228 v~~ 230 (343)
T TIGR02314 228 IFS 230 (343)
T ss_pred HHc
Confidence 864
No 345
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-36 Score=317.03 Aligned_cols=215 Identities=26% Similarity=0.401 Sum_probs=182.0
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhH-hcce
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1296 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1296 (1446)
-++++|++..|.+ -.+|+||||++++||.++++||||+||||++++|+|+.++.+|+|.++|.||...+.++. |..|
T Consensus 3 mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 3789999999976 369999999999999999999999999999999999999999999999999999988764 6679
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCCCC-ChHHHHHHHHHccHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFHMN-DDLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~~~-~d~ei~~aL~~~~L~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
+||||..-+|+. ||.|||..+... .+++-++. .+++..+-+ -|....+..+.+|||||+|.++|||||+.+||
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~----~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~Pk 156 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQER----DLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPK 156 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccccccccc----cHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCC
Confidence 999999999986 999999754321 11111110 022222222 56666677788999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchh
Q 000521 1374 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
+|+|||||.+|-+.--+.|.++|++..+ +-||+.|-++..... -+||.+||++|+|+..|++..+
T Consensus 157 lLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL 224 (237)
T COG0410 157 LLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAEL 224 (237)
T ss_pred EEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHH
Confidence 9999999999999999999999988763 569999999999766 5899999999999999987765
No 346
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-36 Score=329.57 Aligned_cols=181 Identities=23% Similarity=0.379 Sum_probs=160.0
Q ss_pred cEEEEEEEEEecCC--CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCC--CCCCceEEEcCeeCCCCChHhHh
Q 000521 1218 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDLR 1293 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~lR 1293 (1446)
.|+++|++++|++. ..++|+|+||+|++||+++|+|+||||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 58999999999642 246999999999999999999999999999999999986 489999999999986 5678
Q ss_pred cceEEEeCCCCCCCC-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1294 GRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1294 ~~i~~VpQdp~lF~g-TIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
++++++||+|.+|.+ |+++|+... ..+ + +||||||||++||||++++|
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~---------~~~--------------~--------~LSgGe~qrv~la~al~~~p 127 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFS---------ALL--------------R--------GLSVEQRKRLTIGVELAAKP 127 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHH---------HHH--------------h--------cCCHHHhHHHHHHHHHhcCC
Confidence 899999999988875 999998521 000 0 69999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchh--HhhcCEEEEEeC-CEEEEEe
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST--VLNMDEILILDH-GHLVCIS 1433 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~t--i~~~DrIlvl~~-G~vvE~~ 1433 (1446)
++|+|||||++||.++.+.+.+.|++.. +++|+|+|||+++. ...||+|++|++ |++++.|
T Consensus 128 ~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 128 SILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred cEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 9999999999999999999999998764 47999999999984 456999999999 9999865
No 347
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=4.7e-36 Score=319.28 Aligned_cols=164 Identities=33% Similarity=0.449 Sum_probs=150.7
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
|+++|++++|+.+ +++|+|+||+|++||+++|+|++|||||||+++|.|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999643 46999999999999999999999999999999999999999999999873 68999
Q ss_pred EeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000521 1299 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1378 (1446)
Q Consensus 1299 VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1378 (1446)
+||+|.++++|+++|+... ....||+|||||++||||++++|++++||
T Consensus 69 ~~q~~~~~~~tv~~nl~~~--------------------------------~~~~LS~G~~~rv~laral~~~p~~lllD 116 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP--------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLD 116 (166)
T ss_pred ECCCCccccccHHHHhhcc--------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 9999999999999998642 23479999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCCE
Q 000521 1379 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGH 1428 (1446)
Q Consensus 1379 EaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G~ 1428 (1446)
|||++||.++.+.+.+.|++. ++|+|+|||+++....||+|++|++|-
T Consensus 117 EPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 117 EATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred CCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 999999999999999999876 689999999999888899999998863
No 348
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=3e-36 Score=325.61 Aligned_cols=177 Identities=32% Similarity=0.504 Sum_probs=158.7
Q ss_pred EEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEE
Q 000521 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1446)
Q Consensus 1220 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1299 (1446)
+++||+++|+. .++|+|+||++++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 57899999964 4699999999999999999999999999999999999999999999999999988888888999999
Q ss_pred eCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEec
Q 000521 1300 PQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDE 1379 (1446)
Q Consensus 1300 pQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDE 1379 (1446)
|| +++.+++.+ .+.....+||+|||||++||||++++|+++||||
T Consensus 79 ~q--------------------------~l~~~gl~~---------~~~~~~~~LS~G~~qrl~laral~~~p~llllDE 123 (180)
T cd03214 79 PQ--------------------------ALELLGLAH---------LADRPFNELSGGERQRVLLARALAQEPPILLLDE 123 (180)
T ss_pred HH--------------------------HHHHcCCHh---------HhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99 455555443 3344566899999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHh-hcCEEEEEeCCEEEEEe
Q 000521 1380 CTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1380 aTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~ 1433 (1446)
||++||.++.+.+.+.|++..+ ++|+|++||+++.+. -||++++|++|++++.|
T Consensus 124 P~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 124 PTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred CccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999987654 789999999999985 58999999999998754
No 349
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=6.2e-36 Score=328.64 Aligned_cols=183 Identities=22% Similarity=0.311 Sum_probs=162.1
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcC--CCCCCceEEEcCeeCCCCChHhH-hcc
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL--TPICGGQILVDGLNIINTPVRDL-RGR 1295 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl--~~~~~G~I~IDG~di~~i~~~~l-R~~ 1295 (1446)
++++|++++|+. .++|+|+||++++||.+||+|++|||||||+++|.|+ ++|++|+|.+||.++.+.+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999963 4699999999999999999999999999999999999 58999999999999998876654 566
Q ss_pred eEEEeCCCCCCCC-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1296 FAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1296 i~~VpQdp~lF~g-TIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
++|+||+|.+|++ |+++|++ ....+||+|||||++||||++++|+|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l~---------------------------------~~~~~LS~G~~qrv~laral~~~p~i 125 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFLR---------------------------------YVNEGFSGGEKKRNEILQLLLLEPDL 125 (200)
T ss_pred EEEeecChhhccCccHHHHHh---------------------------------hccccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999886 5666550 01136999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHh--hcCEEEEEeCCEEEEEeccc
Q 000521 1375 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL--NMDEILILDHGHLVCISFIC 1436 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~--~~DrIlvl~~G~vvE~~~~~ 1436 (1446)
++|||||++||.++.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|...
T Consensus 126 lllDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~~~~ 190 (200)
T cd03217 126 AILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSGDKE 190 (200)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEccHH
Confidence 99999999999999999999998764 3789999999999998 58999999999999998543
No 350
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=4.7e-36 Score=331.93 Aligned_cols=193 Identities=27% Similarity=0.376 Sum_probs=162.4
Q ss_pred EEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh----HhHhcce
Q 000521 1221 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV----RDLRGRF 1296 (1446)
Q Consensus 1221 f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~----~~lR~~i 1296 (1446)
++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4789999963 369999999999999999999999999999999999999999999999999875542 2467889
Q ss_pred EEEeCCCCCCC-CcHHHhcCCCCC---CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000521 1297 AVVPQSPFLFE-GSLRDNLDPFHM---ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1446)
Q Consensus 1297 ~~VpQdp~lF~-gTIR~NLdp~~~---~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1368 (1446)
++++|+|.+|+ .|+++|+.+... .. ++++.++++ .+|++...+....+||+|||||++|||||
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~---------~~~l~~~~~~~~~~lS~G~~qr~~laral 149 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALE---------KVGLNLKLKQKIYELSGGEQQRVALARAI 149 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHH---------HcCchhhhcCChhhCCHHHHHHHHHHHHH
Confidence 99999999997 699999965211 11 122333333 34555455555668999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhhcCEEEEE
Q 000521 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL 1424 (1446)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlvl 1424 (1446)
+++|++|||||||++||.++.+.+.+.|++.. +++|+|++||+++.+..||+|++|
T Consensus 150 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 150 LKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 99999999999999999999999999998764 478999999999988889999875
No 351
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-36 Score=352.06 Aligned_cols=201 Identities=28% Similarity=0.417 Sum_probs=168.8
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------e
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 669 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------~ 669 (1446)
.++++|+++.|.. ..+|+|+||++++||+++|+||||||||||+++|.|+.+|++|+|.++| +
T Consensus 6 ~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ 79 (351)
T PRK11432 6 FVVLKNITKRFGS------NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRD 79 (351)
T ss_pred EEEEEeEEEEECC------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCC
Confidence 5889999999952 2359999999999999999999999999999999999999999999976 5
Q ss_pred EEEEcCCCCCCCc-cHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000521 670 IAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1446)
Q Consensus 670 i~yv~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lA 741 (1446)
||||+|++.+|+. ||+|||.|+.. .++ ++.+++++..++... ......+|||||||||+||
T Consensus 80 ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~-----------~~r~~~~LSgGq~QRVaLA 148 (351)
T PRK11432 80 ICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGF-----------EDRYVDQISGGQQQRVALA 148 (351)
T ss_pred EEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHHH
Confidence 9999999999965 99999998743 222 234445555555422 2445678999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhh-hCCEEEEEeCCEEEEecChhHHHhc
Q 000521 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 819 (1446)
Q Consensus 742 Raly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1446)
|||+.+|+++|||||||+||+.+.+++.+. +..-. ..++|+|+|||+.+.+. .||+|++|++|+|.+.|+++++...
T Consensus 149 RaL~~~P~lLLLDEP~s~LD~~~r~~l~~~-l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 149 RALILKPKVLLFDEPLSNLDANLRRSMREK-IRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999988876 33211 23789999999999875 5999999999999999999998654
No 352
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.6e-36 Score=301.23 Aligned_cols=197 Identities=24% Similarity=0.409 Sum_probs=170.9
Q ss_pred EecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCC
Q 000521 1227 RYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF 1306 (1446)
Q Consensus 1227 ~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF 1306 (1446)
.|.....++|+|+||++++||.++|.||||||||||++.+.-+.+|++|.++..|.|+++++++.+|++++|+-|.|.||
T Consensus 10 ~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLf 89 (223)
T COG4619 10 GYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALF 89 (223)
T ss_pred HhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCcccc
Confidence 46556668999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHhcC-CCC---CCChH-HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccC
Q 000521 1307 EGSLRDNLD-PFH---MNDDL-KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1381 (1446)
Q Consensus 1307 ~gTIR~NLd-p~~---~~~d~-ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaT 1381 (1446)
.+||.+||- |+. ...|. .-.+-|+++++. ++.+..+-.+||||||||++|+|-|---|+||+|||+|
T Consensus 90 g~tVeDNlifP~~~r~rr~dr~aa~~llar~~l~--------~~~L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~T 161 (223)
T COG4619 90 GDTVEDNLIFPWQIRNRRPDRAAALDLLARFALP--------DSILTKNITELSGGEKQRIALIRNLQFMPKILLLDEIT 161 (223)
T ss_pred ccchhhccccchHHhccCCChHHHHHHHHHcCCc--------hhhhcchhhhccchHHHHHHHHHHhhcCCceEEecCch
Confidence 999999985 332 22332 223334444332 23455566689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchh-HhhcCEEEEEeCCEEEE
Q 000521 1382 ANVDAQTASILQNAISSEC--KGMTVITIAHRIST-VLNMDEILILDHGHLVC 1431 (1446)
Q Consensus 1382 S~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~t-i~~~DrIlvl~~G~vvE 1431 (1446)
|+||..+.+.|.+.|.+++ ++..++.|||+-+. ++.+||++.+..|++-|
T Consensus 162 sALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~ 214 (223)
T COG4619 162 SALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGE 214 (223)
T ss_pred hhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcccc
Confidence 9999999999999998887 47899999999987 88999999999987654
No 353
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-33 Score=310.70 Aligned_cols=507 Identities=16% Similarity=0.145 Sum_probs=328.5
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000521 266 VRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDG-YVLAIALGLTSILKSFFDTQYSFHLSKLKL 344 (1446)
Q Consensus 266 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g-~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~ 344 (1446)
...++|.++|+++....+.++..+... .++-.+-+++-+......+ ..+.+++.+..++.+.. ......-.|.
T Consensus 4 ll~llr~nr~~~i~~~a~s~a~g~~g~---~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~i---s~lg~t~~gq 77 (546)
T COG4615 4 LLLLLRQNRWPFISVMALSLASGALGI---GLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLI---SQLGLTTLGQ 77 (546)
T ss_pred HHHHhcccccHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 457788999998887776665544333 3333333333321111111 11222222222222221 2222333444
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHH
Q 000521 345 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAIT 424 (1446)
Q Consensus 345 ~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~pl~i~i~~~lL~~~lg~a~l~~~~v~ 424 (1446)
.+-..+...+-+|.+.-|....++..++.++.-.+.|+..|...+..+.++.-+.+-+..+...|++.-+..+...++.+
T Consensus 78 ~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV~i 157 (546)
T COG4615 78 HFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVVWI 157 (546)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 44444555566777877777777777889999999999999977777776655444444444455555555666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCcH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Q 000521 425 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWE--QIFSSWLMKTRSSEVKHLSTRKYLDAWC-V 501 (1446)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e--~~~~~~i~~~R~~El~~~~~~~~~~~~~-~ 501 (1446)
++.+..+.+...+..++..+..+.-|+-.+..+.++.|-|.+|+..-- ..+.+.+... .+|.+. +..+...+. .
T Consensus 158 vv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~-a~~~r~--~~~~~n~f~~l 234 (546)
T COG4615 158 VVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPD-AQEYRH--HIIRANTFHLL 234 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcc-hHHHHh--hhhhhhHHHHH
Confidence 777777888888888888888899999999999999999999987522 1122211110 111111 111111111 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCC-CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhhhh
Q 000521 502 FFWATTPTLFSLFTFGLFALMGHQL-DAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 580 (1446)
Q Consensus 502 ~~~~~~~~~~~~~~f~~~~~~~~~L-t~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~e~~~~~~~ 580 (1446)
........+..++....|+...-.. +...+.|....+-.++.|+.++...+|.+..|.++++||.++=..|+..+- ..
T Consensus 235 a~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~-~~ 313 (546)
T COG4615 235 AVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADF-PR 313 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccC-CC
Confidence 1122222333344444343322112 222444545556678899999999999999999999999987654433221 00
Q ss_pred hcCCCCcccCCCccCCCCCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000521 581 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 660 (1446)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~ 660 (1446)
.... ++-..++++|+.|+|... .+-+..||++|++||++.|+|.||||||||++++.|.++|+
T Consensus 314 ~q~~------------p~~~~lelrnvrfay~~~-----~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~Pq 376 (546)
T COG4615 314 PQAF------------PDWKTLELRNVRFAYQDN-----AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQ 376 (546)
T ss_pred CCcC------------CcccceeeeeeeeccCcc-----cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCC
Confidence 0001 123468999999999643 34589999999999999999999999999999999999999
Q ss_pred CcEEEEeCe-------------EEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCC
Q 000521 661 HGSIHASGS-------------IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 726 (1446)
Q Consensus 661 ~G~i~~~~~-------------i~yv~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~ 726 (1446)
+|+|.++|+ ++-|+-|-|||+.+ ..++. -+++..++-++.-.+....+ +.+|.-+
T Consensus 377 sG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~l-----l~~e~~as~q~i~~~LqrLel~~kts-l~d~~fs----- 445 (546)
T COG4615 377 SGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQL-----LGPEGKASPQLIEKWLQRLELAHKTS-LNDGRFS----- 445 (546)
T ss_pred CCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhh-----hCCccCCChHHHHHHHHHHHHhhhhc-ccCCccc-----
Confidence 999999983 23344444554332 22222 34455555454444433221 2222211
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCE
Q 000521 727 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 806 (1446)
Q Consensus 727 g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 806 (1446)
...||-|||.|+|+--|+.-+.|||+|||=-+-=||+-++..++..+-.....|||++-||||-.+...|||++.+++|+
T Consensus 446 ~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~ 525 (546)
T COG4615 446 NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQ 525 (546)
T ss_pred ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCc
Confidence 24699999999999999999999999999999999999988887744322456999999999999999999999999999
Q ss_pred EEEe
Q 000521 807 VKWI 810 (1446)
Q Consensus 807 i~~~ 810 (1446)
+++.
T Consensus 526 ~~e~ 529 (546)
T COG4615 526 LSEL 529 (546)
T ss_pred eeec
Confidence 9864
No 354
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=341.85 Aligned_cols=208 Identities=25% Similarity=0.352 Sum_probs=170.4
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...+++++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~---~~~~~~i~ 81 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ---ALQKNLVA 81 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH---hhccceEE
Confidence 58999999999632 469999999999999999999999999999999999999999999999999752 12234699
Q ss_pred EEeCCCCC---CCCcHHHhcCCCC--------CC---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000521 1298 VVPQSPFL---FEGSLRDNLDPFH--------MN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1363 (1446)
Q Consensus 1298 ~VpQdp~l---F~gTIR~NLdp~~--------~~---~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1363 (1446)
|+||+|.+ +..++++|+.... .. .++++.++++..+ ++........+||||||||++
T Consensus 82 ~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---------l~~~~~~~~~~LSgG~~qrv~ 152 (272)
T PRK15056 82 YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVD---------MVEFRHRQIGELSGGQKKRVF 152 (272)
T ss_pred EeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcC---------ChhHhcCCcccCCHHHHHHHH
Confidence 99999865 4568999975321 00 1122334444444 443344455579999999999
Q ss_pred HHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1364 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1364 LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||++++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+++++ +|++++.|.+..++
T Consensus 153 laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~~ 229 (272)
T PRK15056 153 LARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETTF 229 (272)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhcc
Confidence 9999999999999999999999999999999998764 47899999999998854 8999777 89999999988654
No 355
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.3e-35 Score=331.16 Aligned_cols=199 Identities=39% Similarity=0.692 Sum_probs=175.2
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--------------
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 668 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-------------- 668 (1446)
.+.|+.|.|+.. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~~~~~~~~~-----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (218)
T cd03290 2 QVTNGYFSWGSG-----LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSR 76 (218)
T ss_pred eeeeeEEecCCC-----CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchh
Confidence 456888888643 2359999999999999999999999999999999999999999998854
Q ss_pred ---eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHc
Q 000521 669 ---SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 745 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly 745 (1446)
.++|++|+|.+++.|++||+.++.+++.++.+++++++++...++..|.|+++..+....+||||||||++||||++
T Consensus 77 ~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~ 156 (218)
T cd03290 77 NRYSVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALY 156 (218)
T ss_pred hcceEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHh
Confidence 38999999999999999999987666666778899999999888889999999999999999999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHH-hhcCcccCCceEEEEccCcchhhhCCEEEEEeCCE
Q 000521 746 HGSDIYMLDDVLSAVDAQVARWILSN-AIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 806 (1446)
Q Consensus 746 ~~~~illLDep~s~lD~~~~~~i~~~-~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~ 806 (1446)
.+|+++||||||++||+.+.+.+.+. ++.....+++|+|++||+.+.++.||++++|++|.
T Consensus 157 ~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 157 QNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred hCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998887762 22221234689999999999998899999999874
No 356
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.5e-35 Score=338.34 Aligned_cols=215 Identities=21% Similarity=0.296 Sum_probs=175.6
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcC--CCCCCceEEEcCeeCCCCChHhHhc-
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL--TPICGGQILVDGLNIINTPVRDLRG- 1294 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl--~~~~~G~I~IDG~di~~i~~~~lR~- 1294 (1446)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++...+.+..++
T Consensus 7 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNE--NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCC--EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 4899999999964 3699999999999999999999999999999999998 6899999999999999888766554
Q ss_pred ceEEEeCCCCCCCC-cHHHhcCCCCC----C---ChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCC-CCChhHHHHHHH
Q 000521 1295 RFAVVPQSPFLFEG-SLRDNLDPFHM----N---DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGI-SFSVGQRQLICL 1364 (1446)
Q Consensus 1295 ~i~~VpQdp~lF~g-TIR~NLdp~~~----~---~d~ei~~aL~~~~L~~~i~~lgLd-t~v~e~G~-~LSgGQrQrl~L 1364 (1446)
.++++||+|.+|++ |+++|+..... . .+.+-++.. ....+.++.+|+. +..+.... .||||||||++|
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~l 162 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFL--EIINEKLKLVGMDPSFLSRNVNEGFSGGEKKRNEI 162 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHH--HHHHHHHHHcCCchhhhccccccCCCHHHHHHHHH
Confidence 58999999999987 78999753210 0 010000111 1122333334664 34444443 599999999999
Q ss_pred HHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh--cCEEEEEeCCEEEEEeccc
Q 000521 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN--MDEILILDHGHLVCISFIC 1436 (1446)
Q Consensus 1365 ARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~--~DrIlvl~~G~vvE~~~~~ 1436 (1446)
|||++++|+|+||||||++||.++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|++.
T Consensus 163 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~~~ 237 (252)
T CHL00131 163 LQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGDAE 237 (252)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecChh
Confidence 999999999999999999999999999999998764 48999999999999875 8999999999999999987
No 357
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=5.2e-36 Score=305.04 Aligned_cols=193 Identities=25% Similarity=0.381 Sum_probs=167.3
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
|+|+|++-.|+.. .++|+||||+|++||++.++||||||||||+|+|.++..|++|+|.++|
T Consensus 2 I~f~~V~k~Y~~g-----~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~ 76 (223)
T COG2884 2 IRFENVSKAYPGG-----REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPF 76 (223)
T ss_pred eeehhhhhhcCCC-----chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccch
Confidence 6789999999754 2359999999999999999999999999999999999999999999876
Q ss_pred ---eEEEEcCCCCCC-CccHHHHHhcCCCC---C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 ---SIAYVPQVPWIL-SGTIRDNILFGKNY---D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~-~~ti~~nI~~g~~~---~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
+||+|+|+--|. +-||.||+.|.... . +++..++++..+|.+....+|. .||||||||
T Consensus 77 LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQR 145 (223)
T COG2884 77 LRRQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQR 145 (223)
T ss_pred hhheeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHH
Confidence 599999999766 55999999986431 2 2456778888899888888875 799999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
|+||||+..+|++||-||||-+|||..+..|++. +..-...|.||+++||+.+.+.. --+++.+++|+++...
T Consensus 146 vaIARAiV~~P~vLlADEPTGNLDp~~s~~im~l-feeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 146 VAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRL-FEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHHHHccCCCeEeecCCCCCCChHHHHHHHHH-HHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 9999999999999999999999999999999875 33324568899999999999987 5689999999998653
No 358
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=335.59 Aligned_cols=198 Identities=28% Similarity=0.367 Sum_probs=163.9
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--------------
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 668 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-------------- 668 (1446)
+++|+++.|.. .++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 75 (235)
T cd03261 2 ELRGLTKSFGG------RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRL 75 (235)
T ss_pred eEEEEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHH
Confidence 57889998852 2359999999999999999999999999999999999999999998865
Q ss_pred --eEEEEcCCCCCCCc-cHHHHHhcCCC----CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 --SIAYVPQVPWILSG-TIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 --~i~yv~Q~p~l~~~-ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
.++|++|+|.+++. |++||+.++.. .++ ++..++++.+++... ......+||||||||
T Consensus 76 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qr 144 (235)
T cd03261 76 RRRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGA-----------EDLYPAELSGGMKKR 144 (235)
T ss_pred hcceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHH
Confidence 38999999998876 99999987532 222 234445555555432 234456899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhH
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 815 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 815 (1446)
++||||+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 145 v~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 223 (235)
T cd03261 145 VALARALALDPELLLYDEPTAGLDPIASGVIDDL-IRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEE 223 (235)
T ss_pred HHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHH
Confidence 9999999999999999999999999999988876 332122 37899999999998765 99999999999999999888
Q ss_pred HHh
Q 000521 816 LAV 818 (1446)
Q Consensus 816 l~~ 818 (1446)
+..
T Consensus 224 ~~~ 226 (235)
T cd03261 224 LRA 226 (235)
T ss_pred HcC
Confidence 753
No 359
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=9.3e-36 Score=335.94 Aligned_cols=195 Identities=28% Similarity=0.366 Sum_probs=159.5
Q ss_pred CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEe-CCCCCCC-CcH
Q 000521 1233 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP-QSPFLFE-GSL 1310 (1446)
Q Consensus 1233 ~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~Vp-Qdp~lF~-gTI 1310 (1446)
.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|+| |++.+|. .|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcH
Confidence 4699999999999999999999999999999999999999999999999987653 346788999997 6677764 699
Q ss_pred HHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHH
Q 000521 1311 RDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQ 1387 (1446)
Q Consensus 1311 R~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~ 1387 (1446)
++|+.... ..++++..+. ..+.++.+|++.........||+|||||++||||++.+|++|||||||++||++
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~ 187 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKR-----LDELSELLDLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVV 187 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHH
Confidence 99985422 1222222211 112233335554444455679999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEe
Q 000521 1388 TASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1388 Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~ 1433 (1446)
+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 188 ~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 188 AQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999998764 37899999999998865 8999999999998764
No 360
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.8e-35 Score=351.31 Aligned_cols=202 Identities=26% Similarity=0.385 Sum_probs=170.2
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------- 668 (1446)
..++++|+++.|.. ..+|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|
T Consensus 13 ~~L~l~~l~~~~~~------~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r 86 (375)
T PRK09452 13 PLVELRGISKSFDG------KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENR 86 (375)
T ss_pred ceEEEEEEEEEECC------eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHC
Confidence 45889999999852 2359999999999999999999999999999999999999999999987
Q ss_pred eEEEEcCCCCCCCc-cHHHHHhcCCCC---Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHH
Q 000521 669 SIAYVPQVPWILSG-TIRDNILFGKNY---DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 740 (1446)
Q Consensus 669 ~i~yv~Q~p~l~~~-ti~~nI~~g~~~---~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~l 740 (1446)
.++||+|++.+|.. ||+|||.|+... ++ ++.+++++..++....+ ....+|||||||||+|
T Consensus 87 ~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~p~~LSgGq~QRVaL 155 (375)
T PRK09452 87 HVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQ-----------RKPHQLSGGQQQRVAI 155 (375)
T ss_pred CEEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHHH
Confidence 39999999999865 999999987432 22 24455666666654443 3446899999999999
Q ss_pred HHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhh-hCCEEEEEeCCEEEEecChhHHHh
Q 000521 741 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 741 ARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
||||+.+|+++|||||||+||+...+.+.+. +..-. ..+.|+|+|||+.+.+. .||+|++|++|+|.+.|+++++..
T Consensus 156 ARaL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~ 234 (375)
T PRK09452 156 ARAVVNKPKVLLLDESLSALDYKLRKQMQNE-LKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYE 234 (375)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999888776 33212 23789999999999865 599999999999999999999865
Q ss_pred c
Q 000521 819 S 819 (1446)
Q Consensus 819 ~ 819 (1446)
.
T Consensus 235 ~ 235 (375)
T PRK09452 235 E 235 (375)
T ss_pred C
Confidence 4
No 361
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-36 Score=333.13 Aligned_cols=213 Identities=26% Similarity=0.431 Sum_probs=172.1
Q ss_pred EEEEEEEEEecCCC--CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-C----CCceEEEcCeeCCCCChHh
Q 000521 1219 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-I----CGGQILVDGLNIINTPVRD 1291 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-~----~~G~I~IDG~di~~i~~~~ 1291 (1446)
++++|++..|.... ..+++||||+|++||.+||||.|||||||+.++++|+++ | .+|+|.+||.|+.+++.++
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 58899999997543 468999999999999999999999999999999999998 3 5799999999999999875
Q ss_pred H---h-cceEEEeCCCCC-CC--CcHHHhc----CCCCCC-Ch----HHHHHHHHHccHHHHHHhCCCch---hhhcCCC
Q 000521 1292 L---R-GRFAVVPQSPFL-FE--GSLRDNL----DPFHMN-DD----LKIWSVLEKCHVKEEVEAVGLET---FVKESGI 1352 (1446)
Q Consensus 1292 l---R-~~i~~VpQdp~l-F~--gTIR~NL----dp~~~~-~d----~ei~~aL~~~~L~~~i~~lgLdt---~v~e~G~ 1352 (1446)
+ | +.|++|||||.- |+ -||.+-+ ...... +. ++..+.|+.+ |++. .+..-..
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~V---------gi~~~~~~~~~YPh 152 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELV---------GIPDPERRLKSYPH 152 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHc---------CCCCHHHHHhhCCc
Confidence 4 3 479999999951 21 1333222 111111 11 1223333333 5443 4566677
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEE
Q 000521 1353 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHL 1429 (1446)
Q Consensus 1353 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~v 1429 (1446)
.||||||||+.||-|++-+|++||-||||++||..+.+.|.+.|++.. .+.|+|+|||++..+.. ||||+||.+|+|
T Consensus 153 elSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~i 232 (316)
T COG0444 153 ELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRI 232 (316)
T ss_pred ccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEE
Confidence 899999999999999999999999999999999999999999998765 48999999999998865 899999999999
Q ss_pred EEEeccchhhh
Q 000521 1430 VCISFICRYFI 1440 (1446)
Q Consensus 1430 vE~~~~~~~~~ 1440 (1446)
||.|....+|-
T Consensus 233 VE~g~~~~i~~ 243 (316)
T COG0444 233 VEEGPVEEIFK 243 (316)
T ss_pred EEeCCHHHHhc
Confidence 99999987764
No 362
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2.3e-35 Score=334.76 Aligned_cols=199 Identities=26% Similarity=0.391 Sum_probs=170.5
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +.+++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 4899999999964 3699999999999999999999999999999999999999999999987 45799
Q ss_pred EEeCCCCCCC---CcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1298 VVPQSPFLFE---GSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1298 ~VpQdp~lF~---gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
|+||+|.++. .|+++|+......+++++.++++.+++.+. .......||+|||||++||||++++|++
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~---------~~~~~~~LSgGq~qrv~laral~~~p~l 141 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHL---------IDAPMQKLSGGETQRVLLARALLNRPQL 141 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHH---------HhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999998765 389999754333455667777777766543 3334557999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1375 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
|+|||||++||.++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++ ++++.|.+..++
T Consensus 142 llLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~ 208 (251)
T PRK09544 142 LVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVS 208 (251)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHh
Confidence 999999999999999999999987643 7899999999999865 999999965 799998876553
No 363
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=2e-35 Score=335.65 Aligned_cols=208 Identities=24% Similarity=0.355 Sum_probs=173.3
Q ss_pred EEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEE
Q 000521 1220 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1299 (1446)
Q Consensus 1220 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1299 (1446)
+++||+++ .+|+|+||+|++||++||+|++|||||||+++|.|++++ +|+|.+||.++...+...+|+.++|+
T Consensus 2 ~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~~-~G~i~~~g~~i~~~~~~~~~~~i~~v 74 (248)
T PRK03695 2 QLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLPG-SGSIQFAGQPLEAWSAAELARHRAYL 74 (248)
T ss_pred cccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC-CeEEEECCEecCcCCHHHHhhheEEe
Confidence 56788774 279999999999999999999999999999999999864 99999999999988888888899999
Q ss_pred eCCCC-CCCCcHHHhcCCCCCC--ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc------
Q 000521 1300 PQSPF-LFEGSLRDNLDPFHMN--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK------ 1370 (1446)
Q Consensus 1300 pQdp~-lF~gTIR~NLdp~~~~--~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr------ 1370 (1446)
||++. ++..|+++|+..+... +.++. .....+.++.+|++.........||+|||||++||||+++
T Consensus 75 ~q~~~~~~~~tv~~nl~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~~~~~~ 149 (248)
T PRK03695 75 SQQQTPPFAMPVFQYLTLHQPDKTRTEAV-----ASALNEVAEALGLDDKLGRSVNQLSGGEWQRVRLAAVVLQVWPDIN 149 (248)
T ss_pred cccCccCCCccHHHHHHhcCccCCCcHHH-----HHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhccccccC
Confidence 99985 4567999999764321 11111 1122344444566655666677899999999999999997
Q ss_pred -CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHh-hcCEEEEEeCCEEEEEeccchhh
Q 000521 1371 -SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1371 -~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
+|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|.+..++
T Consensus 150 p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 221 (248)
T PRK03695 150 PAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVL 221 (248)
T ss_pred CCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 679999999999999999999999998764 4789999999999775 58999999999999999876553
No 364
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=2.1e-35 Score=336.44 Aligned_cols=213 Identities=18% Similarity=0.264 Sum_probs=168.4
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCC--CCCCceEEEcCeeCCCCChHhHh-cc
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDLR-GR 1295 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~lR-~~ 1295 (1446)
|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|++ +|++|+|.+||.++...+....+ ..
T Consensus 2 i~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVED--KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 789999999964 36999999999999999999999999999999999995 69999999999999888776654 57
Q ss_pred eEEEeCCCCCCCC-cHHHhcCCC-C---CCChHHHHHHHHHccH----HHHHHhCCCchh-hhcCC-CCCChhHHHHHHH
Q 000521 1296 FAVVPQSPFLFEG-SLRDNLDPF-H---MNDDLKIWSVLEKCHV----KEEVEAVGLETF-VKESG-ISFSVGQRQLICL 1364 (1446)
Q Consensus 1296 i~~VpQdp~lF~g-TIR~NLdp~-~---~~~d~ei~~aL~~~~L----~~~i~~lgLdt~-v~e~G-~~LSgGQrQrl~L 1364 (1446)
++++||+|.+++. |..+|+... . .....+ .++..++ .+.++.++++.. ..... ..||||||||++|
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrv~l 156 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQE---PLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDI 156 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccc---cchHHHHHHHHHHHHHHcCCChhhcccCCCCCCCHHHHHHHHH
Confidence 9999999987765 544443210 0 000000 1111111 223333355321 22222 2699999999999
Q ss_pred HHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccCchhHhh--cCEEEEEeCCEEEEEeccc
Q 000521 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVLN--MDEILILDHGHLVCISFIC 1436 (1446)
Q Consensus 1365 ARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~-~~TvI~IaHrl~ti~~--~DrIlvl~~G~vvE~~~~~ 1436 (1446)
|||++++|+||||||||++||.++.+.+.+.|++..+ ++|||+|||+++.+.. +|+|++|++|++++.|++.
T Consensus 157 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~~ 231 (248)
T PRK09580 157 LQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFT 231 (248)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCHH
Confidence 9999999999999999999999999999999887643 7899999999999987 7999999999999998875
No 365
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1e-35 Score=334.32 Aligned_cols=192 Identities=28% Similarity=0.370 Sum_probs=160.1
Q ss_pred cceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCCCCC-CcHHHhc
Q 000521 1236 LHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFE-GSLRDNL 1314 (1446)
Q Consensus 1236 L~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~-gTIR~NL 1314 (1446)
|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+++||+|.+|+ .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 589999999999999999999999999999999999999999999999876543 2489999999987 5999998
Q ss_pred CCC-----CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHH
Q 000521 1315 DPF-----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTA 1389 (1446)
Q Consensus 1315 dp~-----~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te 1389 (1446)
... ...++++..+ .+.+.++.+|++.........||||||||++|||||+++|++|||||||++||+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRA-----IVEEHIALVGLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHHhcccCCCHHHHHH-----HHHHHHHHcCCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 642 1122222111 122334444666555556678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccch
Q 000521 1390 SILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1390 ~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|.+..
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 201 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILE 201 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCcee
Confidence 99999998764 37899999999998865 89999999999999887653
No 366
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.6e-35 Score=350.37 Aligned_cols=201 Identities=29% Similarity=0.401 Sum_probs=169.7
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------e
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 669 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------~ 669 (1446)
.++++|++++|.. ..+|+|+||++++||+++|+|||||||||||++|.|..+|++|+|.++| .
T Consensus 4 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ 77 (353)
T TIGR03265 4 YLSIDNIRKRFGA------FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRD 77 (353)
T ss_pred EEEEEEEEEEeCC------eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCC
Confidence 4789999999852 2359999999999999999999999999999999999999999999986 4
Q ss_pred EEEEcCCCCCCC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000521 670 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1446)
Q Consensus 670 i~yv~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lA 741 (1446)
+|||+|++-+|+ .||+|||.|+.. .+. ++.+++++..+|+.. ......+|||||||||+||
T Consensus 78 ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~-----------~~~~~~~LSgGq~QRvaLA 146 (353)
T TIGR03265 78 YGIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGS-----------ERKYPGQLSGGQQQRVALA 146 (353)
T ss_pred EEEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCch-----------hhCChhhCCHHHHHHHHHH
Confidence 999999999996 599999998742 222 345556666555432 3456678999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-hCCEEEEEeCCEEEEecChhHHHhc
Q 000521 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 819 (1446)
Q Consensus 742 Raly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1446)
|||+.+|+++|||||||+||+.+.+++.+.+ ..... .+.|+|+|||+.+.+. .||+|++|++|++++.|+++++...
T Consensus 147 RaL~~~P~llLLDEP~s~LD~~~r~~l~~~L-~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 147 RALATSPGLLLLDEPLSALDARVREHLRTEI-RQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHH-HHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999888763 32122 3789999999999865 5999999999999999999998754
No 367
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=342.51 Aligned_cols=205 Identities=25% Similarity=0.381 Sum_probs=170.3
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|++++|+.... ..+++|+|+||+|++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 2 i~~~~v~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 2 IKFEKVNYTYQPNSP-FASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred EEEEEEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 678999999964211 112469999999999999999999999999999999999999999999876
Q ss_pred ----eEEEEcCCC--CCCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000521 669 ----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1446)
Q Consensus 669 ----~i~yv~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 735 (1446)
.++||+|+| .+++.|+.|||.|+.. .++ +++.++++..+|..++ ......+||||||
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~----------~~~~~~~LSgGqk 150 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF----------WEKSPFELSGGQM 150 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------ccCCcccCCHHHH
Confidence 379999998 7888999999998742 222 3456666666664332 2355679999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-hCCEEEEEeCCEEEEecChh
Q 000521 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 814 (1446)
Q Consensus 736 qRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 814 (1446)
||++||||++.+|+++||||||++||+.+.+.+.+. +..-..+|+|+|++||+++.+. .||+|++|++|+++++|+++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~ 229 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQL-FESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPS 229 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999988875 3321234789999999999885 59999999999999999999
Q ss_pred HHHh
Q 000521 815 DLAV 818 (1446)
Q Consensus 815 ~l~~ 818 (1446)
++..
T Consensus 230 ~~~~ 233 (288)
T PRK13643 230 DVFQ 233 (288)
T ss_pred HHHc
Confidence 8754
No 368
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-35 Score=342.44 Aligned_cols=205 Identities=27% Similarity=0.416 Sum_probs=170.1
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|++++|+.... ...++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 3 l~~~~l~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 3 ITFQKVEHRYQYKTP-FERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEECCCCc-ccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 689999999964211 113469999999999999999999999999999999999999999998876
Q ss_pred ----eEEEEcCCC--CCCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000521 669 ----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1446)
Q Consensus 669 ----~i~yv~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 735 (1446)
.|+||+|+| .+++.||+|||.|+.. .+. ++.+++++.++|..++. .....+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~----------~~~~~~LSgGq~ 151 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELL----------ARSPFELSGGQM 151 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhh----------hCCcccCCHHHH
Confidence 389999998 5888899999988632 222 34566777777754332 345568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-hCCEEEEEeCCEEEEecCh
Q 000521 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSS 813 (1446)
Q Consensus 736 qRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~ 813 (1446)
||++|||||+.+|+++||||||++||+.+.+.+++. +..... .|.|+|++||+++.+. .||+|++|++|++++.|++
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~-L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~ 230 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEM-FYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTP 230 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999988875 332112 3789999999999976 4999999999999999999
Q ss_pred hHHHh
Q 000521 814 ADLAV 818 (1446)
Q Consensus 814 ~~l~~ 818 (1446)
+++..
T Consensus 231 ~~~~~ 235 (290)
T PRK13634 231 REIFA 235 (290)
T ss_pred HHHhc
Confidence 88754
No 369
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-35 Score=341.51 Aligned_cols=207 Identities=28% Similarity=0.441 Sum_probs=170.0
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|+.... ..+++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13637 2 SIKIENLTHIYMEGTP-FEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSD 80 (287)
T ss_pred EEEEEEEEEECCCCCc-cccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHH
Confidence 4789999999964211 113469999999999999999999999999999999999999999998865
Q ss_pred ---eEEEEcCCC--CCCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHH
Q 000521 669 ---SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 736 (1446)
Q Consensus 669 ---~i~yv~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkq 736 (1446)
.||||+|+| .+++.|++|||.|+.. .++ ++.+++++.++|.. .+........|||||||
T Consensus 81 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------~~~~~~~~~~LSgGq~q 151 (287)
T PRK13637 81 IRKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDY---------EDYKDKSPFELSGGQKR 151 (287)
T ss_pred HhhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCc---------hhhccCCcccCCHHHHH
Confidence 389999998 5778899999998632 232 23455666666641 12234566799999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-hCCEEEEEeCCEEEEecChh
Q 000521 737 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 814 (1446)
Q Consensus 737 Ri~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 814 (1446)
|++|||||+.+|+++||||||++||+.+.+++.+. +..... .|+|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 152 rv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~ 230 (287)
T PRK13637 152 RVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNK-IKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPR 230 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999988875 333122 3789999999999875 59999999999999999999
Q ss_pred HHHh
Q 000521 815 DLAV 818 (1446)
Q Consensus 815 ~l~~ 818 (1446)
++..
T Consensus 231 ~~~~ 234 (287)
T PRK13637 231 EVFK 234 (287)
T ss_pred HHHh
Confidence 8754
No 370
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=4.2e-35 Score=310.99 Aligned_cols=159 Identities=33% Similarity=0.515 Sum_probs=148.0
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh-HhHhcceE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRFA 1297 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i~ 1297 (1446)
|+++|++++|+. .++++|+||+|++||.++|+|++|||||||+++|.|+++|++|+|.+||.++...+. +..|++++
T Consensus 1 l~~~~l~~~~~~--~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGG--VKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 579999999964 369999999999999999999999999999999999999999999999999988875 45678899
Q ss_pred EEeCCCCCCCCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000521 1298 VVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1377 (1446)
Q Consensus 1298 ~VpQdp~lF~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1377 (1446)
++|| ||+|||||++||||++++|++++|
T Consensus 79 ~~~q----------------------------------------------------LS~G~~qrl~laral~~~p~illl 106 (163)
T cd03216 79 MVYQ----------------------------------------------------LSVGERQMVEIARALARNARLLIL 106 (163)
T ss_pred EEEe----------------------------------------------------cCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999 999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEE
Q 000521 1378 DECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVC 1431 (1446)
Q Consensus 1378 DEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE 1431 (1446)
||||++||.++.+.+.+.|++.. ++.|+|++||+++.+.. ||++++|++|++++
T Consensus 107 DEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 107 DEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred ECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999998763 47899999999998865 89999999999976
No 371
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.6e-35 Score=347.36 Aligned_cols=201 Identities=32% Similarity=0.442 Sum_probs=168.0
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------e
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 669 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------~ 669 (1446)
.++++|+++.|.. ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 2 ~L~i~~l~~~~~~------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ 75 (353)
T PRK10851 2 SIEIANIKKSFGR------TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRK 75 (353)
T ss_pred EEEEEEEEEEeCC------eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCC
Confidence 3678999999852 2359999999999999999999999999999999999999999999976 4
Q ss_pred EEEEcCCCCCCCc-cHHHHHhcCCCC-------Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 670 IAYVPQVPWILSG-TIRDNILFGKNY-------DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 670 i~yv~Q~p~l~~~-ti~~nI~~g~~~-------~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
++||+|++.+++. |++|||.|+... +. ++.++.++..+|... ......+||||||||
T Consensus 76 i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LSgGq~QR 144 (353)
T PRK10851 76 VGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHL-----------ADRYPAQLSGGQKQR 144 (353)
T ss_pred EEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 9999999999975 999999987431 21 234455555555432 234557899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhH
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 815 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 815 (1446)
|+|||||+.+|+++|||||||+||+.+.+.+.+. +..... .+.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 145 valArAL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~ 223 (353)
T PRK10851 145 VALARALAVEPQILLLDEPFGALDAQVRKELRRW-LRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQ 223 (353)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999988876 333122 36899999999998665 99999999999999999999
Q ss_pred HHhc
Q 000521 816 LAVS 819 (1446)
Q Consensus 816 l~~~ 819 (1446)
+...
T Consensus 224 i~~~ 227 (353)
T PRK10851 224 VWRE 227 (353)
T ss_pred HHhC
Confidence 8654
No 372
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-35 Score=340.75 Aligned_cols=206 Identities=23% Similarity=0.382 Sum_probs=168.3
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|+.... ...++|+|+||+|++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (286)
T PRK13646 2 TIRFDNVSYTYQKGTP-YEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYI 80 (286)
T ss_pred EEEEEEEEEEECCCCc-cccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 4789999999963211 113469999999999999999999999999999999999999999998875
Q ss_pred -----eEEEEcCCC--CCCCccHHHHHhcCCC---CChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000521 669 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1446)
Q Consensus 669 -----~i~yv~Q~p--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 734 (1446)
.||||+|+| .+++.|++|||.|+.. ++.+ +..+.++.++|+.+ ..+..+.+|||||
T Consensus 81 ~~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq 150 (286)
T PRK13646 81 RPVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRD----------VMSQSPFQMSGGQ 150 (286)
T ss_pred HHHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHH
Confidence 379999998 6888899999998632 2332 23344555555322 1245677999999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhh-hCCEEEEEeCCEEEEecC
Q 000521 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGS 812 (1446)
Q Consensus 735 kqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~ 812 (1446)
|||++|||||+.+|+++||||||++||+.+.+.+.+. +.... ..|+|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 151 ~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~ 229 (286)
T PRK13646 151 MRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRL-LKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTS 229 (286)
T ss_pred HHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999999988875 33211 24789999999999875 599999999999999999
Q ss_pred hhHHHh
Q 000521 813 SADLAV 818 (1446)
Q Consensus 813 ~~~l~~ 818 (1446)
++++..
T Consensus 230 ~~~~~~ 235 (286)
T PRK13646 230 PKELFK 235 (286)
T ss_pred HHHHHh
Confidence 988754
No 373
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-35 Score=339.91 Aligned_cols=204 Identities=29% Similarity=0.401 Sum_probs=170.2
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|++++|+.... .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (279)
T PRK13650 4 IIEVKNLTFKYKEDQE---KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIR 80 (279)
T ss_pred eEEEEeEEEEcCCCCc---CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHH
Confidence 4789999999963211 2369999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCCC--CCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000521 669 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1446)
Q Consensus 669 -~i~yv~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi 738 (1446)
.++|++|+|. ++..||+|||.|+.. .++ ++..++++..+|+...+ ....+||||||||+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qrv 149 (279)
T PRK13650 81 HKIGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKE-----------REPARLSGGQKQRV 149 (279)
T ss_pred hhceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHH
Confidence 4899999984 566799999998732 232 34566677777754332 34468999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHH
Q 000521 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 817 (1446)
Q Consensus 739 ~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~ 817 (1446)
+||||++.+|+++||||||++||+.+.+.+++. +..... .|+|+|++||+++.+..||+|++|++|+++..|+++++.
T Consensus 150 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 150 AIAGAVAMRPKIIILDEATSMLDPEGRLELIKT-IKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999988875 333122 378999999999998789999999999999999998875
Q ss_pred hc
Q 000521 818 VS 819 (1446)
Q Consensus 818 ~~ 819 (1446)
..
T Consensus 229 ~~ 230 (279)
T PRK13650 229 SR 230 (279)
T ss_pred cC
Confidence 43
No 374
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.6e-35 Score=330.95 Aligned_cols=197 Identities=28% Similarity=0.394 Sum_probs=162.3
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCc-----cCCCcEEEEeC--------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM-----MLTHGSIHASG-------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~-----~~~~G~i~~~~-------- 668 (1446)
++++|+++.|+. .++|+|+||++++||+++|+||||||||||+++|+|.+ +|++|+|.++|
T Consensus 1 i~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~ 74 (227)
T cd03260 1 IELRDLNVYYGD------KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDV 74 (227)
T ss_pred CEEEEEEEEcCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcch
Confidence 357889998853 23599999999999999999999999999999999999 99999998865
Q ss_pred -------eEEEEcCCCCCCCccHHHHHhcCCCC----C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchH
Q 000521 669 -------SIAYVPQVPWILSGTIRDNILFGKNY----D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 733 (1446)
Q Consensus 669 -------~i~yv~Q~p~l~~~ti~~nI~~g~~~----~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGG 733 (1446)
.++|++|+|.+++.|++||+.++... + +++..++++.+++.......++ +.+||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG 145 (227)
T cd03260 75 DVLELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGG 145 (227)
T ss_pred HHHHHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHH
Confidence 38999999998878999999875321 1 2344556666666543332110 4689999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecC
Q 000521 734 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 812 (1446)
Q Consensus 734 QkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 812 (1446)
||||++||||++.+|++++|||||++||+.+.+.+++. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 146 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~ 223 (227)
T cd03260 146 QQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEEL-IAE-LKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGP 223 (227)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecC
Confidence 99999999999999999999999999999999998876 333 3233899999999998764 99999999999999888
Q ss_pred hhH
Q 000521 813 SAD 815 (1446)
Q Consensus 813 ~~~ 815 (1446)
+++
T Consensus 224 ~~~ 226 (227)
T cd03260 224 TEQ 226 (227)
T ss_pred ccc
Confidence 655
No 375
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3e-35 Score=348.38 Aligned_cols=202 Identities=27% Similarity=0.382 Sum_probs=170.2
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCC--cEEEEeC---------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH--GSIHASG--------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~--G~i~~~~--------- 668 (1446)
..++++|++++|.. ..+|+|+||++++||+++|+|||||||||||++|.|+.+|++ |+|.++|
T Consensus 4 ~~l~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~ 77 (362)
T TIGR03258 4 GGIRIDHLRVAYGA------NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPH 77 (362)
T ss_pred eEEEEEEEEEEECC------eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHH
Confidence 45889999999953 235999999999999999999999999999999999999999 9999876
Q ss_pred --eEEEEcCCCCCCCc-cHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000521 669 --SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1446)
Q Consensus 669 --~i~yv~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi 738 (1446)
.|+||+|++.+|.. ||+|||.|+.. .+. ++.+++++..+|+... .....+|||||||||
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~-----------~~~~~~LSgGq~QRv 146 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAA-----------AHLPAQLSGGMQQRI 146 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchh-----------hCChhhCCHHHHHHH
Confidence 49999999999965 99999998642 221 3455666666665433 344568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccC--CceEEEEccCcchhh-hCCEEEEEeCCEEEEecChhH
Q 000521 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML--QKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSAD 815 (1446)
Q Consensus 739 ~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~--~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~ 815 (1446)
+|||||..+|+++|||||||+||+...+++.+.+ .....+ |.|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 147 aLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l-~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~ 225 (362)
T TIGR03258 147 AIARAIAIEPDVLLLDEPLSALDANIRANMREEI-AALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQA 225 (362)
T ss_pred HHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHH-HHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999888763 321222 689999999999865 499999999999999999999
Q ss_pred HHhc
Q 000521 816 LAVS 819 (1446)
Q Consensus 816 l~~~ 819 (1446)
+...
T Consensus 226 ~~~~ 229 (362)
T TIGR03258 226 LYDA 229 (362)
T ss_pred HHhC
Confidence 8654
No 376
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-35 Score=340.77 Aligned_cols=206 Identities=22% Similarity=0.333 Sum_probs=169.0
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|+.... ...++|+|+||+|++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (305)
T PRK13651 2 QIKVKNIVKIFNKKLP-TELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEK 80 (305)
T ss_pred EEEEEEEEEEECCCCC-ccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccc
Confidence 3788999999964321 112469999999999999999999999999999999999999999998752
Q ss_pred -------------------------eEEEEcCCC--CCCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhh
Q 000521 669 -------------------------SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISL 714 (1446)
Q Consensus 669 -------------------------~i~yv~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~ 714 (1446)
.||||+|+| .+++.||+|||.|+.. .++ ++..++++.++|..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-- 158 (305)
T PRK13651 81 EKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESY-- 158 (305)
T ss_pred cccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh--
Confidence 379999987 5778899999998742 222 2345566666664322
Q ss_pred ccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh
Q 000521 715 MVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS 794 (1446)
Q Consensus 715 ~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~ 794 (1446)
.+....+||||||||++|||||+.+|+++||||||++||+...+.+.+. +.....+|+|+|++||+++.+.
T Consensus 159 --------~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivtHd~~~~~ 229 (305)
T PRK13651 159 --------LQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEI-FDNLNKQGKTIILVTHDLDNVL 229 (305)
T ss_pred --------hhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeeCHHHHH
Confidence 2356678999999999999999999999999999999999998888875 3321234789999999999865
Q ss_pred -hCCEEEEEeCCEEEEecChhHHHh
Q 000521 795 -AADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 795 -~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
.||+|++|++|++++.|+++++..
T Consensus 230 ~~adrv~vl~~G~i~~~g~~~~~~~ 254 (305)
T PRK13651 230 EWTKRTIFFKDGKIIKDGDTYDILS 254 (305)
T ss_pred HhCCEEEEEECCEEEEECCHHHHhc
Confidence 599999999999999999998754
No 377
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-35 Score=330.89 Aligned_cols=199 Identities=33% Similarity=0.463 Sum_probs=164.6
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------e
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 669 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------~ 669 (1446)
.++++|+++.|+. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 2 ~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 75 (239)
T cd03296 2 SIEVRNVSKRFGD------FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERN 75 (239)
T ss_pred EEEEEeEEEEECC------EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccc
Confidence 3678999999852 2359999999999999999999999999999999999999999999875 4
Q ss_pred EEEEcCCCCCCC-ccHHHHHhcCCCC-------Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 670 IAYVPQVPWILS-GTIRDNILFGKNY-------DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 670 i~yv~Q~p~l~~-~ti~~nI~~g~~~-------~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
++|++|+|.++. .|++||+.++... +. ++.++.++.++++. .......+||||||||
T Consensus 76 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qr 144 (239)
T cd03296 76 VGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDW-----------LADRYPAQLSGGQRQR 144 (239)
T ss_pred eEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChh-----------hhhcChhhCCHHHHHH
Confidence 899999999886 5999999876321 11 22344455555532 2344557899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhH
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 815 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 815 (1446)
++||||++.+|+++||||||++||+++.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 145 l~la~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 223 (239)
T cd03296 145 VALARALAVEPKVLLLDEPFGALDAKVRKELRRW-LRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDE 223 (239)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHH
Confidence 9999999999999999999999999999988875 333122 37899999999998765 99999999999999999888
Q ss_pred HH
Q 000521 816 LA 817 (1446)
Q Consensus 816 l~ 817 (1446)
+.
T Consensus 224 ~~ 225 (239)
T cd03296 224 VY 225 (239)
T ss_pred Hh
Confidence 74
No 378
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=7.4e-35 Score=322.41 Aligned_cols=189 Identities=29% Similarity=0.438 Sum_probs=161.3
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------- 668 (1446)
..++++|+++.|+... .++++|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~~~----~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 5 GEIEVENLSVRYAPDL----PPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CeEEEEEEEEEeCCCC----cccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 4688999999986321 2359999999999999999999999999999999999999999999875
Q ss_pred --eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHcc
Q 000521 669 --SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 746 (1446)
Q Consensus 669 --~i~yv~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~ 746 (1446)
.++||+|+|.++++|++||+.+...+++++ +.+++. ++++...||||||||++||||++.
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~---~~~~l~---------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEE---IYGALR---------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHH---HHHHhh---------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 499999999999999999997654444332 222221 345678999999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecC
Q 000521 747 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 812 (1446)
Q Consensus 747 ~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 812 (1446)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+.+.+..||++++|++|++.+.|+
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKT-IRE-EFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 9999999999999999999888776 333 345789999999999988899999999999988775
No 379
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=6e-35 Score=327.76 Aligned_cols=205 Identities=27% Similarity=0.444 Sum_probs=174.0
Q ss_pred CCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC---------
Q 000521 598 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------- 668 (1446)
Q Consensus 598 ~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~--------- 668 (1446)
....++++|+++.|+.... .++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~ 84 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPD---TLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHK 84 (226)
T ss_pred cCceEEEEEEEEEeCCCCC---CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHH
Confidence 4467899999999964211 2369999999999999999999999999999999999999999999876
Q ss_pred ----eEEEEcCCCCCCCccHHHHHhcCCCC-ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHH
Q 000521 669 ----SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 743 (1446)
Q Consensus 669 ----~i~yv~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARa 743 (1446)
.++|++|+|.+++.|++||+.++... ....+.+..+...++.-++.++.|.++..+.+..+|||||||||+||||
T Consensus 85 ~~~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~lara 164 (226)
T cd03248 85 YLHSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARA 164 (226)
T ss_pred HHHhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHH
Confidence 38999999999999999999876432 2222333344455667788888788888899999999999999999999
Q ss_pred HccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEE
Q 000521 744 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQV 807 (1446)
Q Consensus 744 ly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i 807 (1446)
++++|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||+|++|++|++
T Consensus 165 l~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 165 LIRNPQVLILDEATSALDAESEQQVQQA-LYD-WPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999988876 333 3446899999999999988999999999874
No 380
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-35 Score=350.03 Aligned_cols=200 Identities=28% Similarity=0.410 Sum_probs=168.3
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------e
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 669 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------~ 669 (1446)
.++++|++++|.. ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 3 ~l~i~~l~~~~~~------~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~ 76 (369)
T PRK11000 3 SVTLRNVTKAYGD------VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERG 76 (369)
T ss_pred EEEEEEEEEEeCC------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCC
Confidence 3788999999852 2359999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCCc-cHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000521 670 IAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1446)
Q Consensus 670 i~yv~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lA 741 (1446)
|+||+|++.++.. |++|||.|+.. .+. ++.+++++.++++... .....+|||||||||+||
T Consensus 77 i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-----------~~~~~~LSgGq~QRvaLA 145 (369)
T PRK11000 77 VGMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLL-----------DRKPKALSGGQRQRVAIG 145 (369)
T ss_pred EEEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhh-----------cCChhhCCHHHHHHHHHH
Confidence 9999999998865 99999998643 222 3456666666665433 334568999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHHh
Q 000521 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 742 Raly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
|||+.+|+++|||||||+||+.+.+.+.+. +..... .+.|+|+|||+++.+.. ||+|++|++|++.+.|+++++..
T Consensus 146 raL~~~P~lLLLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~ 223 (369)
T PRK11000 146 RTLVAEPSVFLLDEPLSNLDAALRVQMRIE-ISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYH 223 (369)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999988775 332122 37899999999998764 99999999999999999998864
No 381
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-35 Score=365.78 Aligned_cols=214 Identities=25% Similarity=0.389 Sum_probs=179.9
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEEcCeeCCCCChHh-Hhc
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNIINTPVRD-LRG 1294 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~--~~G~I~IDG~di~~i~~~~-lR~ 1294 (1446)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+... .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 4899999999963 3699999999999999999999999999999999999996 8999999999998777654 467
Q ss_pred ceEEEeCCCCCCCC-cHHHhcCCCCC------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000521 1295 RFAVVPQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1446)
Q Consensus 1295 ~i~~VpQdp~lF~g-TIR~NLdp~~~------~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1446)
+++||||+|.+|+. |+++|+.+... .+.++..+ .+.+.++.+|++........+||||||||++||||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~a 157 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL-----RAQKLLAQLKLDINPATPVGNLGLGQQQLVEIAKA 157 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH-----HHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHH
Confidence 89999999998875 99999975421 11111111 12334445566555555556899999999999999
Q ss_pred hccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1368 LLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
|+++|+|||||||||+||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|.+..+
T Consensus 158 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 230 (506)
T PRK13549 158 LNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGM 230 (506)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccC
Confidence 999999999999999999999999999998753 47899999999999875 899999999999999887654
No 382
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.6e-35 Score=323.91 Aligned_cols=194 Identities=25% Similarity=0.332 Sum_probs=164.8
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 789999999964 36999999999999999999999999999999999999999999999999997654 456789999
Q ss_pred EeCCCCCCC-CcHHHhcCCCCC----CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1299 VPQSPFLFE-GSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1299 VpQdp~lF~-gTIR~NLdp~~~----~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
+||++.+++ .|++||+..... .+++++.++++..++.+ ........||+|||||++||||++++|+
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~---------~~~~~~~~LS~G~~qrl~la~al~~~p~ 149 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAG---------FEDVPVRQLSAGQQRRVALARLWLTRAP 149 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHH---------HhhCChhhcCHHHHHHHHHHHHHhcCCC
Confidence 999998886 599999964321 22344555555555543 3344456799999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhhc-CEEEEE
Q 000521 1374 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNM-DEILIL 1424 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~-DrIlvl 1424 (1446)
+++|||||++||.++.+.+.+.|++.. +++|+|+|||+++.+..| +|++++
T Consensus 150 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 150 LWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 999999999999999999999998763 478999999999999665 777776
No 383
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-35 Score=332.27 Aligned_cols=203 Identities=22% Similarity=0.291 Sum_probs=170.4
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCcc---CCCcEEEEeC---------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM---LTHGSIHASG--------- 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~---~~~G~i~~~~--------- 668 (1446)
.++++|+++.|+. +++|+|+||++++||+++|+||||||||||+++|+|+++ |++|+|.++|
T Consensus 2 ~~~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~ 75 (246)
T PRK14269 2 IAKTTNLNLFYGK------KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVV 75 (246)
T ss_pred ceeeeeeEEEECC------EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHH
Confidence 4678999999852 235999999999999999999999999999999999974 6899999876
Q ss_pred ----eEEEEcCCCCCCCccHHHHHhcCCCC---------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000521 669 ----SIAYVPQVPWILSGTIRDNILFGKNY---------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1446)
Q Consensus 669 ----~i~yv~Q~p~l~~~ti~~nI~~g~~~---------~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 735 (1446)
.++|++|+|.+++.|++||+.++... ++++..++++.+++...+.. ...+.+.+||||||
T Consensus 76 ~~~~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 148 (246)
T PRK14269 76 ALRKNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQ 148 (246)
T ss_pred HHhhhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHH
Confidence 38999999999999999999875311 12245667777777654432 23556789999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChh
Q 000521 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 814 (1446)
Q Consensus 736 qRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~ 814 (1446)
||++||||++++|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|+.+
T Consensus 149 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 226 (246)
T PRK14269 149 QRLCIARALAIKPKLLLLDEPTSALDPISSGVIEEL-LKE-LSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESK 226 (246)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999888775 433 3457899999999998764 9999999999999999988
Q ss_pred HHHh
Q 000521 815 DLAV 818 (1446)
Q Consensus 815 ~l~~ 818 (1446)
++..
T Consensus 227 ~~~~ 230 (246)
T PRK14269 227 EFFE 230 (246)
T ss_pred HHHh
Confidence 8753
No 384
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=7.3e-35 Score=320.57 Aligned_cols=194 Identities=23% Similarity=0.336 Sum_probs=164.9
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDG--RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCC--ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 478999999964 36999999999999999999999999999999999999999999999999987653 567899999
Q ss_pred EeCCCCCC-CCcHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000521 1299 VPQSPFLF-EGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1376 (1446)
Q Consensus 1299 VpQdp~lF-~gTIR~NLdp~~~-~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1376 (1446)
+||++.++ ..|+++|+..+.. ..++++.++++..++.+. ......+||+|||||++||||++++|+++|
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~---------~~~~~~~LS~G~~qrl~laral~~~p~lll 148 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGF---------EDRPVAQLSAGQQRRVALARLLLSGRPLWI 148 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhh---------hcCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999876 4799999975432 345566666676666532 223345799999999999999999999999
Q ss_pred EeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHh-hcCEEEEE
Q 000521 1377 LDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILIL 1424 (1446)
Q Consensus 1377 LDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl 1424 (1446)
|||||++||.++.+.+.+.|++.. +++|+|+|||+...+. .||+++++
T Consensus 149 lDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 149 LDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 999999999999999999998753 4799999999877654 57998876
No 385
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2.8e-34 Score=370.33 Aligned_cols=215 Identities=23% Similarity=0.300 Sum_probs=148.1
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHh------cCC---CCCCce------------
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALF------RLT---PICGGQ------------ 1276 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~------rl~---~~~~G~------------ 1276 (1446)
.++++|++. ..|+|+|++|++||.+||+|.+|||||||+.-++ ++. .+..+.
T Consensus 614 ~L~v~~l~~-------~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 686 (943)
T PRK00349 614 FLKLKGARE-------NNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKV 686 (943)
T ss_pred eEEecCCcc-------CCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCce
Confidence 478888752 2599999999999999999999999999998764 211 122233
Q ss_pred EEEcCeeCCCCC----------hHhHhcce---------EEEeCCCCCCC-----------CcHHHhcCCCCC-------
Q 000521 1277 ILVDGLNIINTP----------VRDLRGRF---------AVVPQSPFLFE-----------GSLRDNLDPFHM------- 1319 (1446)
Q Consensus 1277 I~IDG~di~~i~----------~~~lR~~i---------~~VpQdp~lF~-----------gTIR~NLdp~~~------- 1319 (1446)
|.||-.+|..-+ .+.+|.-. ++-++.-.+.+ |+++.|+.+...
T Consensus 687 v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 766 (943)
T PRK00349 687 IDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDV 766 (943)
T ss_pred EEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCcc
Confidence 334443332111 12233332 22222222222 455555543211
Q ss_pred -----C------------ChH-----HHHHHHHHc----cH---HHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHhc
Q 000521 1320 -----N------------DDL-----KIWSVLEKC----HV---KEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1369 (1446)
Q Consensus 1320 -----~------------~d~-----ei~~aL~~~----~L---~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL 1369 (1446)
+ +-. .+.++++-. ++ .+.++.+||+. .++.....||||||||+.|||+|+
T Consensus 767 C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~LAraL~ 846 (943)
T PRK00349 767 CKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKIARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAKELS 846 (943)
T ss_pred ccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhhhHHHHHHHHCCCCcccccCCcccCCHHHHHHHHHHHHHh
Confidence 0 111 122222221 11 12333448875 467777899999999999999999
Q ss_pred cCC---CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhhcCEEEEE------eCCEEEEEeccchhh
Q 000521 1370 KSS---KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL------DHGHLVCISFICRYF 1439 (1446)
Q Consensus 1370 r~~---~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlvl------~~G~vvE~~~~~~~~ 1439 (1446)
++| +++||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|..+.
T Consensus 847 ~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~ 926 (943)
T PRK00349 847 KRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIKTADWIIDLGPEGGDGGGEIVATGTPEEVA 926 (943)
T ss_pred cCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEecCCcCCCCCEEEEeCCHHHHH
Confidence 999 9999999999999999999999998764 588999999999999999999999 799999999987654
No 386
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4.5e-36 Score=307.34 Aligned_cols=221 Identities=23% Similarity=0.340 Sum_probs=189.9
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhH-hcc
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGR 1295 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~ 1295 (1446)
+.+..+|+..+|.. .+|+++|||+|++||.||+.||+||||||.+.++.|+..|++|+|.+||.||+.+|.+.- |--
T Consensus 3 ~~L~a~~l~K~y~k--r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKK--RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCC--eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 45788999999964 479999999999999999999999999999999999999999999999999999999863 445
Q ss_pred eEEEeCCCCCCCC-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1296 FAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1296 i~~VpQdp~lF~g-TIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
|+|+||||.+|.+ ||+|||..--+..+.+.+.+-++..+.+.++.+.+...-...|..||||||+|+-|||||..+|+.
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a~sLSGGERRR~EIARaLa~~P~f 160 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKAYSLSGGERRRVEIARALAANPKF 160 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcccccccchHHHHHHHHHHhcCCCE
Confidence 9999999999987 999998644333222233344454556666666777777778889999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCch-hHhhcCEEEEEeCCEEEEEeccchhh
Q 000521 1375 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIS-TVLNMDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~-ti~~~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
++||||.+++|+-+-..||+.|+... +|--|++.-|... |+.-|||.+++.+|+|...|+|....
T Consensus 161 iLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~ 227 (243)
T COG1137 161 ILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIV 227 (243)
T ss_pred EEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHh
Confidence 99999999999999999999998764 4778888899865 67779999999999999999998654
No 387
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-35 Score=337.07 Aligned_cols=199 Identities=29% Similarity=0.391 Sum_probs=167.5
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|+.. .++|+|+||+|++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~-----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 78 (274)
T PRK13647 4 IIEVEDLHFRYKDG-----TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVR 78 (274)
T ss_pred eEEEEEEEEEeCCC-----CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHH
Confidence 47899999998521 2359999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCC--CCCCccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000521 669 -SIAYVPQVP--WILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1446)
Q Consensus 669 -~i~yv~Q~p--~l~~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi 738 (1446)
.++|++|+| .+++.|++||+.|+.. .+ ++++.++++.++|...... ....||||||||+
T Consensus 79 ~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LSgG~~qrv 147 (274)
T PRK13647 79 SKVGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDK-----------PPYHLSYGQKKRV 147 (274)
T ss_pred hhEEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcC-----------ChhhCCHHHHHHH
Confidence 389999998 5788899999998632 22 2345667777777543332 3358999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-hCCEEEEEeCCEEEEecChhHH
Q 000521 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADL 816 (1446)
Q Consensus 739 ~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l 816 (1446)
+||||+..+|+++||||||++||+.+.+++++. +.....+|+|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 148 ~laraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 148 AIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEI-LDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999999999988876 3331234789999999999985 5999999999999999998654
No 388
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-35 Score=326.23 Aligned_cols=191 Identities=30% Similarity=0.405 Sum_probs=158.1
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------eEE
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SIA 671 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------~i~ 671 (1446)
+++|+++.|+. +++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .++
T Consensus 2 ~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~ 75 (213)
T cd03259 2 ELKGLSKTYGS------VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIG 75 (213)
T ss_pred eeeeeEEEeCC------eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEE
Confidence 57889998852 2359999999999999999999999999999999999999999999875 489
Q ss_pred EEcCCCCCCC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHH
Q 000521 672 YVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 743 (1446)
Q Consensus 672 yv~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARa 743 (1446)
|++|+|.++. .|++||+.++.. .+. ++.++.++.+++.... .....+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLL-----------NRYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhh-----------hcChhhCCHHHHHHHHHHHH
Confidence 9999998875 599999987532 122 2345566666665433 33446899999999999999
Q ss_pred HccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 744 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 744 ly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREE-LKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999988876 332122 37899999999998765 9999999999998654
No 389
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=328.51 Aligned_cols=201 Identities=26% Similarity=0.392 Sum_probs=168.9
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|+. . ++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~---~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 76 (241)
T PRK14250 3 EIEFKEVSYSSFG---K---EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLR 76 (241)
T ss_pred eEEEEeEEEEeCC---e---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhh
Confidence 4788999998842 2 359999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCCCCCCccHHHHHhcCCCC---ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHH
Q 000521 669 -SIAYVPQVPWILSGTIRDNILFGKNY---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 744 (1446)
Q Consensus 669 -~i~yv~Q~p~l~~~ti~~nI~~g~~~---~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARal 744 (1446)
.++|++|+|.+++.|++||+.++... +.++..+.++.++++.+. ......+||||||||++||||+
T Consensus 77 ~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrl~la~al 146 (241)
T PRK14250 77 RKIGMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY----------ATRDVKNLSGGEAQRVSIARTL 146 (241)
T ss_pred hcEEEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH----------hhCCcccCCHHHHHHHHHHHHH
Confidence 38999999999989999999876432 233556667777664322 2345678999999999999999
Q ss_pred ccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHHh
Q 000521 745 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 745 y~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
+.+|+++||||||++||+.+.+.+.+. +..... .|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (241)
T PRK14250 147 ANNPEVLLLDEPTSALDPTSTEIIEEL-IVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFT 221 (241)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhc
Confidence 999999999999999999998888775 333122 37899999999999775 99999999999999999888753
No 390
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.3e-34 Score=362.34 Aligned_cols=214 Identities=23% Similarity=0.370 Sum_probs=180.6
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHh-cce
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLR-GRF 1296 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR-~~i 1296 (1446)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+....+ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999964 4699999999999999999999999999999999999999999999999999887776655 469
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1375 (1446)
+|+||++.+|++ |+++|+.+.....+ +..+ .+.+.++.+|++.........||||||||++|||||+++|++|
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~-~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p~ll 162 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQ-ASMQ-----KMKQLLAALGCQLDLDSSAGSLEVADRQIVEILRGLMRDSRIL 162 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccch-HHHH-----HHHHHHHHcCCCccccCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999998876 99999975432111 1111 1223344446655455555689999999999999999999999
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1376 CLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1376 lLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|++++.|.+..+.
T Consensus 163 lLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (510)
T PRK15439 163 ILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLS 228 (510)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcC
Confidence 9999999999999999999998753 47899999999999865 8999999999999999887654
No 391
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4.6e-35 Score=331.02 Aligned_cols=198 Identities=25% Similarity=0.354 Sum_probs=163.3
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--------------
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 668 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-------------- 668 (1446)
+++|+++.|+. .++|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 75 (236)
T cd03219 2 EVRGLTKRFGG------LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARL 75 (236)
T ss_pred eeeeeEEEECC------EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhc
Confidence 57888998852 2359999999999999999999999999999999999999999998865
Q ss_pred eEEEEcCCCCCCCc-cHHHHHhcCCCCC-----------------hhhHHHHHHHhcchHHHhhccCCCcccccCCCCcc
Q 000521 669 SIAYVPQVPWILSG-TIRDNILFGKNYD-----------------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 730 (1446)
Q Consensus 669 ~i~yv~Q~p~l~~~-ti~~nI~~g~~~~-----------------~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~L 730 (1446)
.++|++|+|.+++. |++|||.++.... .++..+.++..+++ ...+....+|
T Consensus 76 ~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~L 144 (236)
T cd03219 76 GIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLA-----------DLADRPAGEL 144 (236)
T ss_pred CEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCcc-----------chhhCChhhC
Confidence 38999999998876 9999998753210 11233334433332 2345667799
Q ss_pred chHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEE
Q 000521 731 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKW 809 (1446)
Q Consensus 731 SGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~ 809 (1446)
|||||||++||||+..+|++++|||||++||+.+.+++.+. +.....+++|+|++||+++.+.. ||+|++|++|++.+
T Consensus 145 SgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~ 223 (236)
T cd03219 145 SYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAEL-IRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIA 223 (236)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEe
Confidence 99999999999999999999999999999999999988876 33212257899999999999865 99999999999999
Q ss_pred ecChhHHHh
Q 000521 810 IGSSADLAV 818 (1446)
Q Consensus 810 ~g~~~~l~~ 818 (1446)
.|+++++..
T Consensus 224 ~~~~~~~~~ 232 (236)
T cd03219 224 EGTPDEVRN 232 (236)
T ss_pred ecCHHHhcc
Confidence 999888743
No 392
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-35 Score=332.29 Aligned_cols=204 Identities=24% Similarity=0.331 Sum_probs=168.9
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEeC------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------ 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~-----~~~G~i~~~~------ 668 (1446)
..++++|++++|.. . .+|+|+||++++||+++|+||||||||||+++|+|..+ |++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~---~---~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 78 (253)
T PRK14242 5 PKMEARGLSFFYGD---F---QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDP 78 (253)
T ss_pred cEEEEeeeEEEECC---e---eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEcccc
Confidence 35889999999952 2 35999999999999999999999999999999999864 5899998865
Q ss_pred ---------eEEEEcCCCCCCCccHHHHHhcCCC---C-C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000521 669 ---------SIAYVPQVPWILSGTIRDNILFGKN---Y-D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 731 (1446)
Q Consensus 669 ---------~i~yv~Q~p~l~~~ti~~nI~~g~~---~-~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LS 731 (1446)
.++|++|++.+++.|++||+.++.. . + +++.++.++.+++...+. +..+....+||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS 151 (253)
T PRK14242 79 HVDVVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLS 151 (253)
T ss_pred ccCHHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCC
Confidence 3899999999998999999987521 1 1 234455566666643332 23456678999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEe
Q 000521 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 810 (1446)
Q Consensus 732 GGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 810 (1446)
||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 152 gGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~ 229 (253)
T PRK14242 152 GGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEEL-IHE-LKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEV 229 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999988875 433 3456899999999999865 999999999999999
Q ss_pred cChhHHHh
Q 000521 811 GSSADLAV 818 (1446)
Q Consensus 811 g~~~~l~~ 818 (1446)
|+++++..
T Consensus 230 g~~~~~~~ 237 (253)
T PRK14242 230 GPTEQIFT 237 (253)
T ss_pred CCHHHHHc
Confidence 99888753
No 393
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-35 Score=326.27 Aligned_cols=197 Identities=29% Similarity=0.370 Sum_probs=161.2
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--------eEEEEc
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAYVP 674 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~--------~i~yv~ 674 (1446)
+++|+++.|+... ..+++|+|+||+|++|++++|+||||||||||+++|+|..+|++|+|.++| .++|++
T Consensus 2 ~~~~l~~~~~~~~--~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~ 79 (220)
T cd03293 2 EVRNVSKTYGGGG--GAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVF 79 (220)
T ss_pred eEEEEEEEcCCCC--cceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEe
Confidence 5788999885321 112469999999999999999999999999999999999999999999876 589999
Q ss_pred CCCCCCC-ccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHcc
Q 000521 675 QVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 746 (1446)
Q Consensus 675 Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~ 746 (1446)
|+|.+++ .|++||+.++.. .+ .++.++.++.++++.... ....+||||||||++||||++.
T Consensus 80 q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 80 QQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFEN-----------AYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred cccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CCcccCCHHHHHHHHHHHHHHc
Confidence 9999887 699999986532 11 234556666666654333 3446899999999999999999
Q ss_pred CCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhh-CCEEEEEe--CCEEEEecCh
Q 000521 747 GSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMD--KGQVKWIGSS 813 (1446)
Q Consensus 747 ~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~i~~l~--~G~i~~~g~~ 813 (1446)
+|+++||||||++||+.+.+.+++. +.... ..++|+|++||+++.+.. ||++++|+ +|++++.++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~-l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEE-LLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999998876 33211 237899999999998764 99999999 7999987764
No 394
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-35 Score=345.99 Aligned_cols=204 Identities=26% Similarity=0.362 Sum_probs=169.3
Q ss_pred CceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC----------
Q 000521 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 668 (1446)
Q Consensus 599 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~---------- 668 (1446)
...++++|+++.|.. ..+|+|+||++++||+++|+|||||||||||++|.|+.+|++|+|.++|
T Consensus 17 ~~~l~l~~v~~~~~~------~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~ 90 (377)
T PRK11607 17 TPLLEIRNLTKSFDG------QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQ 90 (377)
T ss_pred CceEEEEeEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHH
Confidence 346899999999852 2359999999999999999999999999999999999999999999987
Q ss_pred -eEEEEcCCCCCCCc-cHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHH
Q 000521 669 -SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 739 (1446)
Q Consensus 669 -~i~yv~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~ 739 (1446)
.||||+|++-+|.. ||+|||.|+.. .+. ++..++++..++.... .....+|||||||||+
T Consensus 91 r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRVa 159 (377)
T PRK11607 91 RPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFA-----------KRKPHQLSGGQRQRVA 159 (377)
T ss_pred CCEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHH
Confidence 38999999999975 99999998742 222 2345556666664322 3445689999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-hCCEEEEEeCCEEEEecChhHHHh
Q 000521 740 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 740 lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
|||||+.+|+++|||||||+||+...+.+.+.+..-....+.|+|+|||+.+.+. .||+|++|++|++++.|+++++..
T Consensus 160 LARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~ 239 (377)
T PRK11607 160 LARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYE 239 (377)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHh
Confidence 9999999999999999999999999988876532111123789999999999865 599999999999999999999865
Q ss_pred c
Q 000521 819 S 819 (1446)
Q Consensus 819 ~ 819 (1446)
.
T Consensus 240 ~ 240 (377)
T PRK11607 240 H 240 (377)
T ss_pred C
Confidence 4
No 395
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=363.93 Aligned_cols=214 Identities=20% Similarity=0.326 Sum_probs=179.5
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhH-hcce
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1296 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1296 (1446)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |+++
T Consensus 5 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 4899999999964 369999999999999999999999999999999999999999999999999988776553 4679
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCCC-------C---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFHM-------N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1365 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~~-------~---~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1365 (1446)
+||||++.+|.. |+++|+..... . +.++..+ .+.+.++.+|++........+||||||||++||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~ia 157 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRV-----RAAMMLLRVGLKVDLDEKVANLSISHKQMLEIA 157 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHH-----HHHHHHHHcCCCCCcccchhhCCHHHHHHHHHH
Confidence 999999998875 99999964311 0 1111111 123344444665444555568999999999999
Q ss_pred HHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1366 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1366 RALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
|||+++|+||||||||++||..+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|++++.|.+..+
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 232 (510)
T PRK09700 158 KTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDV 232 (510)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhC
Confidence 99999999999999999999999999999998753 47899999999999875 899999999999999888765
No 396
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=4.8e-35 Score=329.12 Aligned_cols=194 Identities=26% Similarity=0.373 Sum_probs=161.2
Q ss_pred ccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC----CCceEEEcCeeCCCCChHhHhcceEEEeCCCC-CC-C-
Q 000521 1235 ALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI----CGGQILVDGLNIINTPVRDLRGRFAVVPQSPF-LF-E- 1307 (1446)
Q Consensus 1235 vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~----~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~-lF-~- 1307 (1446)
+|+|+||+|++||++||+|++|||||||+++|.|+++| ++|+|.+||.++... +..+++++|+||+|. .| +
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 58999999999999999999999999999999999999 899999999998754 233468999999995 34 3
Q ss_pred CcHHHhcCCC----CCCC---hHHHHHHHHHccHHHHHHhCCCc---hhhhcCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000521 1308 GSLRDNLDPF----HMND---DLKIWSVLEKCHVKEEVEAVGLE---TFVKESGISFSVGQRQLICLARALLKSSKVLCL 1377 (1446)
Q Consensus 1308 gTIR~NLdp~----~~~~---d~ei~~aL~~~~L~~~i~~lgLd---t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1377 (1446)
-|+++|+... +... ++++.++++ .+|++ +.......+||+|||||++||||++++|+||||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~l~---------~~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllL 149 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQARALILEALE---------AVGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIA 149 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHHHHHHHHHHH---------HcCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4888887321 1111 122333333 34554 445666778999999999999999999999999
Q ss_pred eccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchhh
Q 000521 1378 DECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1378 DEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~~ 1439 (1446)
||||++||.++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|.+..++
T Consensus 150 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 150 DEPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIF 214 (230)
T ss_pred cCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999987643 7899999999999964 9999999999999999988765
No 397
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=362.46 Aligned_cols=214 Identities=19% Similarity=0.304 Sum_probs=178.4
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHh-Hhcce
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1296 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1296 (1446)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999963 46999999999999999999999999999999999999999999999999997665544 46789
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCCC-------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~~-------~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1368 (1446)
+|+||++.+|.. |+++|+.+... .+..+..+ ...+.++.+|++........+||||||||++|||||
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 156 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA-----EADKLLARLNLRFSSDKLVGELSIGEQQMVEIAKVL 156 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH-----HHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHH
Confidence 999999988875 99999975321 11111111 123344445665544455567999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
+.+|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|.+..+
T Consensus 157 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (501)
T PRK10762 157 SFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADL 228 (501)
T ss_pred hcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcC
Confidence 99999999999999999999999999998753 47899999999999865 899999999999999887754
No 398
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-35 Score=325.98 Aligned_cols=197 Identities=21% Similarity=0.276 Sum_probs=162.9
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------e
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 669 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------~ 669 (1446)
++++|++++|.. .++|+|+||++++||+++|+||||||||||+++|.|.++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (220)
T cd03265 1 IEVENLVKKYGD------FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRR 74 (220)
T ss_pred CEEEEEEEEECC------EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhc
Confidence 357888988852 2359999999999999999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCCc-cHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000521 670 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1446)
Q Consensus 670 i~yv~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lA 741 (1446)
++|++|++.+++. |++||+.++.. .+ +++.++.++.++++... .....+||||||||++||
T Consensus 75 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr~~la 143 (220)
T cd03265 75 IGIVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAA-----------DRLVKTYSGGMRRRLEIA 143 (220)
T ss_pred EEEecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCChhhCCHHHHHHHHHH
Confidence 8999999988865 99999986421 22 23455666777665432 233468999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccC-CceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHH
Q 000521 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML-QKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 816 (1446)
Q Consensus 742 Raly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~-~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 816 (1446)
||++.+|+++||||||++||+.+.+.+.+. +.....+ ++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 144 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 144 RSLVHRPEVLFLDEPTIGLDPQTRAHVWEY-IEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999988875 3321223 7899999999999875 999999999999998887654
No 399
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=9.5e-35 Score=330.46 Aligned_cols=202 Identities=27% Similarity=0.375 Sum_probs=167.3
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCC-----CcEEEEeC--------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT-----HGSIHASG-------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~-----~G~i~~~~-------- 668 (1446)
++++|++++|.. . .+++|+||+|++||+++|+|+||||||||+++|.|.++|+ +|+|.++|
T Consensus 2 l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~ 75 (247)
T TIGR00972 2 IEIENLNLFYGE---K---EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKI 75 (247)
T ss_pred EEEEEEEEEECC---e---eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEcccccc
Confidence 678999999853 1 3599999999999999999999999999999999999998 99998864
Q ss_pred -------eEEEEcCCCCCCCccHHHHHhcCCC----CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchH
Q 000521 669 -------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 733 (1446)
Q Consensus 669 -------~i~yv~Q~p~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGG 733 (1446)
.++|++|++++++.|++||+.++.. .+. ++.+++++..++..++. ........+||||
T Consensus 76 ~~~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG 148 (247)
T TIGR00972 76 DVVELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGG 148 (247)
T ss_pred chHHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHH
Confidence 3899999999999999999987532 111 23445555666653221 1235567799999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecC
Q 000521 734 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 812 (1446)
Q Consensus 734 QkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 812 (1446)
||||++||||++.+|+++||||||++||+.+.+.+++. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 149 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 226 (247)
T TIGR00972 149 QQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEEL-IQE-LKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGP 226 (247)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999988775 433 3345899999999998765 99999999999999999
Q ss_pred hhHHHh
Q 000521 813 SADLAV 818 (1446)
Q Consensus 813 ~~~l~~ 818 (1446)
++++..
T Consensus 227 ~~~~~~ 232 (247)
T TIGR00972 227 TEQIFT 232 (247)
T ss_pred HHHHHh
Confidence 888753
No 400
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=330.30 Aligned_cols=204 Identities=26% Similarity=0.335 Sum_probs=168.3
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEeC------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~-----~~G~i~~~~------ 668 (1446)
..++++|+++.|.. . .+|+|+||++++||+++|+|+||||||||+++|.|+++| ++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 79 (254)
T PRK14273 6 AIIETENLNLFYTD---F---KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSN 79 (254)
T ss_pred ceEEEeeeEEEeCC---c---eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccc
Confidence 46899999999852 1 359999999999999999999999999999999999987 489998754
Q ss_pred ---------eEEEEcCCCCCCCccHHHHHhcCCCC----Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000521 669 ---------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 731 (1446)
Q Consensus 669 ---------~i~yv~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LS 731 (1446)
.++|++|+|.+++.|++|||.++... +. ++..++++.+++...+. .....+..+||
T Consensus 80 ~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS 152 (254)
T PRK14273 80 NFDILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK-------DKLNTNALSLS 152 (254)
T ss_pred cccHHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH-------HHHhCCcccCC
Confidence 38999999999989999999876421 21 23344555555532221 12344678999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEe
Q 000521 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 810 (1446)
Q Consensus 732 GGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 810 (1446)
||||||++||||++.+|+++||||||++||+.+.+.+++. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 153 gG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~ 230 (254)
T PRK14273 153 GGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEEL-IIN-LKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEE 230 (254)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999988875 333 3456899999999999765 999999999999999
Q ss_pred cChhHHHh
Q 000521 811 GSSADLAV 818 (1446)
Q Consensus 811 g~~~~l~~ 818 (1446)
|+++++..
T Consensus 231 g~~~~~~~ 238 (254)
T PRK14273 231 SSTDELFF 238 (254)
T ss_pred CCHHHHHh
Confidence 99988754
No 401
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=4.9e-35 Score=326.15 Aligned_cols=190 Identities=25% Similarity=0.402 Sum_probs=157.2
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|+++.|+.. . +++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 77 (216)
T TIGR00960 2 IRFEQVSKAYPGG-H---QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPF 77 (216)
T ss_pred eEEEEEEEEecCC-C---eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHH
Confidence 5789999998532 1 2359999999999999999999999999999999999999999998875
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 ---SIAYVPQVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
.++|++|+|.++. .|++||+.++.. .+ +++..++++.+++..... ....+||||||||
T Consensus 78 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qr 146 (216)
T TIGR00960 78 LRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAH-----------ALPMQLSGGEQQR 146 (216)
T ss_pred HHHhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHH
Confidence 3899999999886 599999987521 11 234566677776654332 3345899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEE
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 807 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i 807 (1446)
++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++
T Consensus 147 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 147 VAIARAIVHKPPLLLADEPTGNLDPELSRDIMRL-FEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999988876 33212347899999999999875 999999999974
No 402
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7e-35 Score=322.06 Aligned_cols=188 Identities=27% Similarity=0.418 Sum_probs=157.3
Q ss_pred EEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC----------eEEEE
Q 000521 604 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------SIAYV 673 (1446)
Q Consensus 604 ~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------~i~yv 673 (1446)
++|+++.|+.. .++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .++|+
T Consensus 2 ~~~l~~~~~~~-----~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~ 76 (205)
T cd03226 2 IENISFSYKKG-----TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYV 76 (205)
T ss_pred cccEEEEeCCc-----CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEE
Confidence 46778887531 2359999999999999999999999999999999999999999999876 48999
Q ss_pred cCCC--CCCCccHHHHHhcCCCC---ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCC
Q 000521 674 PQVP--WILSGTIRDNILFGKNY---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 748 (1446)
Q Consensus 674 ~Q~p--~l~~~ti~~nI~~g~~~---~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~ 748 (1446)
+|+| .+++.|++||+.++... ++++.+++++.+++..... ....+||||||||++||||+..+|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKE-----------RHPLSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcC-----------CCchhCCHHHHHHHHHHHHHHhCC
Confidence 9998 46778999999876432 2346677888887764333 233589999999999999999999
Q ss_pred CEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEE
Q 000521 749 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK 808 (1446)
Q Consensus 749 ~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~ 808 (1446)
++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGEL-IRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999888775 43312457899999999999875 9999999999874
No 403
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.4e-34 Score=345.13 Aligned_cols=214 Identities=27% Similarity=0.438 Sum_probs=176.3
Q ss_pred cEEEEEEEEEecCCCC--cccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC----CceEEEcCeeCCCCChHh
Q 000521 1218 LIEFQNVTMRYKPSLP--AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC----GGQILVDGLNIINTPVRD 1291 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~--~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~----~G~I~IDG~di~~i~~~~ 1291 (1446)
-++++|++..|..... .+++||||+|.+||.+||||.|||||||+.++|+|+.++. +|+|.+||.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975433 5999999999999999999999999999999999999987 899999999999988866
Q ss_pred Hh----cceEEEeCCCC-CCCC--cHHHhcC----CCCCCC----hHHHHHHHHHccHHHHHHhCCCchhhhc--CCCCC
Q 000521 1292 LR----GRFAVVPQSPF-LFEG--SLRDNLD----PFHMND----DLKIWSVLEKCHVKEEVEAVGLETFVKE--SGISF 1354 (1446)
Q Consensus 1292 lR----~~i~~VpQdp~-lF~g--TIR~NLd----p~~~~~----d~ei~~aL~~~~L~~~i~~lgLdt~v~e--~G~~L 1354 (1446)
.| ++|++|||||+ .++- ||.+-+. .....+ .++..+.|+.+ |+...... -...|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~V---------gl~~~~~~~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQV---------GLPDPERRDRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHc---------CCCChhhhccCCccc
Confidence 54 57999999997 4443 5544432 111111 11222333333 55544433 56789
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEE
Q 000521 1355 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVC 1431 (1446)
Q Consensus 1355 SgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE 1431 (1446)
|||||||+.||+||..+|++||+||||.+||..|.+.|.+.|++.. .+.++|+|||++..+.+ ||||+||.+|++||
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998765 58999999999999976 89999999999999
Q ss_pred Eeccchhhh
Q 000521 1432 ISFICRYFI 1440 (1446)
Q Consensus 1432 ~~~~~~~~~ 1440 (1446)
.|.+..+|.
T Consensus 236 ~G~~~~i~~ 244 (539)
T COG1123 236 TGPTEEILS 244 (539)
T ss_pred ecCHHHHHh
Confidence 999987763
No 404
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=9.3e-35 Score=319.61 Aligned_cols=193 Identities=20% Similarity=0.252 Sum_probs=161.7
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.. ....+|+++++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHD--QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCC--eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 689999999964 369999999999999999999999999999999999999999999999999875 34577899999
Q ss_pred EeCCCCCCC-CcHHHhcCCCCC--CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000521 1299 VPQSPFLFE-GSLRDNLDPFHM--NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1375 (1446)
Q Consensus 1299 VpQdp~lF~-gTIR~NLdp~~~--~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1375 (1446)
+||++.+++ .|+++|+..... ..+.++.+++ +.++++...+....+||+|||||++||||++++|++|
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~l---------~~~~l~~~~~~~~~~LS~G~~~rv~laral~~~p~~l 149 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVGITELC---------RLFSLEHLIDYPCGLLSSGQKRQVALLRLWMSKAKLW 149 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHHHHHHH---------HHcCCchhhhCChhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 999999875 699999864321 1122333333 3334443333444579999999999999999999999
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHh-cCCcEEEEeccCchhHhhcCEEEE
Q 000521 1376 CLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEILI 1423 (1446)
Q Consensus 1376 lLDEaTS~lD~~Te~~Iq~~I~~~-~~~~TvI~IaHrl~ti~~~DrIlv 1423 (1446)
||||||++||..+.+.+.+.|++. -+++|+|++||+.+.+.+||.-.+
T Consensus 150 ilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 150 LLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 999999999999999999999875 358899999999999999986543
No 405
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=343.20 Aligned_cols=204 Identities=28% Similarity=0.366 Sum_probs=167.4
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|++++|+... ...++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~i~~l~~~y~~~~--~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~ 79 (343)
T PRK11153 2 IELKNISKVFPQGG--RTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRK 79 (343)
T ss_pred EEEEeEEEEeCCCC--CceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHH
Confidence 57899999996311 112469999999999999999999999999999999999999999998875
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
.|+|++|+|.+++ .|++||+.++.. .+. ++..+.++..++... ......+||||||||
T Consensus 80 ~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~qR 148 (343)
T PRK11153 80 ARRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDK-----------ADRYPAQLSGGQKQR 148 (343)
T ss_pred HhcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 3999999999886 599999987532 222 233445555555432 234557899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhH
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 815 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 815 (1446)
++||||++.+|+++||||||++||+.+.+.+.+. +.... .+|+|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 149 v~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~ 227 (343)
T PRK11153 149 VAIARALASNPKVLLCDEATSALDPATTRSILEL-LKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSE 227 (343)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999988876 33211 237899999999999875 99999999999999999998
Q ss_pred HHhc
Q 000521 816 LAVS 819 (1446)
Q Consensus 816 l~~~ 819 (1446)
+...
T Consensus 228 ~~~~ 231 (343)
T PRK11153 228 VFSH 231 (343)
T ss_pred HHhC
Confidence 8643
No 406
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.2e-34 Score=329.13 Aligned_cols=198 Identities=25% Similarity=0.372 Sum_probs=162.8
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|+++.|.. . .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~--~---~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (243)
T TIGR02315 2 LEVENLSKVYPN--G---KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRK 76 (243)
T ss_pred eEEEeeeeecCC--C---cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHH
Confidence 568899998851 1 2359999999999999999999999999999999999999999998875
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCCC---------------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000521 669 ---SIAYVPQVPWILS-GTIRDNILFGKNY---------------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 729 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~~-~ti~~nI~~g~~~---------------~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~ 729 (1446)
.++|++|++.++. .|++||+.++... +.++..++++.+++... ......+
T Consensus 77 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~ 145 (243)
T TIGR02315 77 LRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADK-----------AYQRADQ 145 (243)
T ss_pred HHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhh-----------hcCCccc
Confidence 2899999998886 5999999875310 11234445555555432 3446678
Q ss_pred cchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-hCCEEEEEeCCEE
Q 000521 730 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQV 807 (1446)
Q Consensus 730 LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i 807 (1446)
||||||||++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+. .||++++|++|++
T Consensus 146 LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i 224 (243)
T TIGR02315 146 LSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDY-LKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEI 224 (243)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEE
Confidence 999999999999999999999999999999999999888775 333122 3789999999999985 4999999999999
Q ss_pred EEecChhHH
Q 000521 808 KWIGSSADL 816 (1446)
Q Consensus 808 ~~~g~~~~l 816 (1446)
++.|+++++
T Consensus 225 ~~~~~~~~~ 233 (243)
T TIGR02315 225 VFDGAPSEL 233 (243)
T ss_pred EecCCHHHh
Confidence 999988775
No 407
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=361.65 Aligned_cols=210 Identities=24% Similarity=0.377 Sum_probs=175.5
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh-HhHhcce
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRF 1296 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i 1296 (1446)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+. +.+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPG--VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECC--EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 369999999999999999999999999999999999999999999999999976543 4567899
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCCC------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1369 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~~------~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1369 (1446)
+|+||+|.+|++ |+++|+..... .+..+..+ .+.+.++.+|++........+||||||||++||||++
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~laral~ 156 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNY-----EAREQLEHLGVDIDPDTPLKYLSIGQRQMVEIAKALA 156 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHH-----HHHHHHHHcCCCCCcCCchhhCCHHHHHHHHHHHHHH
Confidence 999999998876 99999975321 11111111 1234445556654445555689999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEec
Q 000521 1370 KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISF 1434 (1446)
Q Consensus 1370 r~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~ 1434 (1446)
++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.+.
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~ 223 (501)
T PRK11288 157 RNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFD 223 (501)
T ss_pred hCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecC
Confidence 9999999999999999999999999998753 47899999999999865 89999999999987554
No 408
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-35 Score=334.24 Aligned_cols=186 Identities=30% Similarity=0.432 Sum_probs=156.5
Q ss_pred ccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------------eEEEEcCCCCCCC-c
Q 000521 621 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILS-G 682 (1446)
Q Consensus 621 ~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------------~i~yv~Q~p~l~~-~ 682 (1446)
.+|+|+||++++|++++|+||||||||||+++|.|+++|++|+|.++| .++|++|+|.+++ .
T Consensus 38 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 117 (269)
T cd03294 38 VGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHR 117 (269)
T ss_pred eEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCCC
Confidence 359999999999999999999999999999999999999999998865 3899999999885 5
Q ss_pred cHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcC
Q 000521 683 TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDD 755 (1446)
Q Consensus 683 ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDe 755 (1446)
|++||+.++.. ++ +++..++++.+++...+. ....+||||||||++||||++.+|+++||||
T Consensus 118 tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Gq~qrv~lAral~~~p~illLDE 186 (269)
T cd03294 118 TVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEH-----------KYPDELSGGMQQRVGLARALAVDPDILLMDE 186 (269)
T ss_pred cHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------CCcccCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 99999987421 22 234556677777654443 3345899999999999999999999999999
Q ss_pred CcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHHh
Q 000521 756 VLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 756 p~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
||++||+.+.+.+.+. +.... ..|+|+|++||+++.+.. ||++++|++|++.+.|+++++..
T Consensus 187 Pt~~LD~~~~~~l~~~-l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 187 AFSALDPLIRREMQDE-LLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred CCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999988876 32211 237899999999998764 99999999999999999988754
No 409
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=332.63 Aligned_cols=202 Identities=26% Similarity=0.399 Sum_probs=170.4
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|+.. . +++|+|+||+|++||+++|+||||||||||+++|.|..+|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~-~---~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~ 80 (279)
T PRK13635 5 IIRVEHISFRYPDA-A---TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVR 80 (279)
T ss_pred eEEEEEEEEEeCCC-C---ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHh
Confidence 58899999999532 1 2369999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCC--CCCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000521 669 -SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1446)
Q Consensus 669 -~i~yv~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi 738 (1446)
.++|++|+| .+++.|++|||.++.. .++ ++..++++.++|+..+.. ....||||||||+
T Consensus 81 ~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LS~G~~qrv 149 (279)
T PRK13635 81 RQVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNR-----------EPHRLSGGQKQRV 149 (279)
T ss_pred hheEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhC-----------CcccCCHHHHHHH
Confidence 389999998 4667899999987532 222 345667777777655443 3458999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHH
Q 000521 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 817 (1446)
Q Consensus 739 ~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~ 817 (1446)
+||||++.+|+++||||||++||+.+.+.+++. +..... .+.|+|++||+++.+..||+|++|++|++++.|+.+++.
T Consensus 150 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13635 150 AIAGVLALQPDIIILDEATSMLDPRGRREVLET-VRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIF 228 (279)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999998876 333122 378999999999998889999999999999999988875
Q ss_pred h
Q 000521 818 V 818 (1446)
Q Consensus 818 ~ 818 (1446)
.
T Consensus 229 ~ 229 (279)
T PRK13635 229 K 229 (279)
T ss_pred c
Confidence 4
No 410
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=329.57 Aligned_cols=205 Identities=25% Similarity=0.331 Sum_probs=170.3
Q ss_pred CceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEeC-----
Q 000521 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG----- 668 (1446)
Q Consensus 599 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~-----~~~G~i~~~~----- 668 (1446)
...++++|+++.|+. . ++|+|+||+|++||+++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 11 ~~~l~~~~l~~~~~~---~---~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~ 84 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---F---HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILT 84 (260)
T ss_pred CceEEEEEEEEEeCC---e---EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccc
Confidence 356889999999852 2 35999999999999999999999999999999999986 5899998764
Q ss_pred ----------eEEEEcCCCCCCCccHHHHHhcCCC----CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCcc
Q 000521 669 ----------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 730 (1446)
Q Consensus 669 ----------~i~yv~Q~p~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~L 730 (1446)
.++|++|+|.+++.|++||+.++.. .++ ++.+++++..++..++. +..++...+|
T Consensus 85 ~~~~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~L 157 (260)
T PRK10744 85 PKQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSL 157 (260)
T ss_pred cccchHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCC
Confidence 3899999999988999999987532 222 33455666666543332 2345677899
Q ss_pred chHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEE
Q 000521 731 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKW 809 (1446)
Q Consensus 731 SGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~ 809 (1446)
|||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++
T Consensus 158 S~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 235 (260)
T PRK10744 158 SGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEEL-ITE-LKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIE 235 (260)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999988876 333 3456899999999999865 99999999999999
Q ss_pred ecChhHHHh
Q 000521 810 IGSSADLAV 818 (1446)
Q Consensus 810 ~g~~~~l~~ 818 (1446)
.|+.+++..
T Consensus 236 ~g~~~~~~~ 244 (260)
T PRK10744 236 FGNTDTIFT 244 (260)
T ss_pred eCCHHHHHh
Confidence 999888753
No 411
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=332.53 Aligned_cols=200 Identities=27% Similarity=0.413 Sum_probs=166.8
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|++++|+.. ..+|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (274)
T PRK13644 2 IRLENVSYSYPDG-----TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIR 76 (274)
T ss_pred EEEEEEEEEcCCC-----CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHH
Confidence 5788999998521 2359999999999999999999999999999999999999999998875
Q ss_pred -eEEEEcCCCC--CCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000521 669 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1446)
Q Consensus 669 -~i~yv~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi 738 (1446)
.++|++|+|. +++.|++|||.++.. .+. ++.+++++.++++.. .......||||||||+
T Consensus 77 ~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrv 145 (274)
T PRK13644 77 KLVGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKY-----------RHRSPKTLSGGQGQCV 145 (274)
T ss_pred hheEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHH-----------hcCCcccCCHHHHHHH
Confidence 3899999986 567899999987632 222 334555666666433 2345568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHh
Q 000521 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 739 ~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
+||||++.+|+++||||||++||+.+.+.+++. +.....+|.|+|++||+++.++.||+|++|++|++++.|+.+++..
T Consensus 146 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 146 ALAGILTMEPECLIFDEVTSMLDPDSGIAVLER-IKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999999988876 3321234789999999999998899999999999999999888754
No 412
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-34 Score=328.02 Aligned_cols=197 Identities=26% Similarity=0.379 Sum_probs=161.9
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--------------
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 668 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-------------- 668 (1446)
+++|+++.|... .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (241)
T cd03256 2 EVENLSKTYPNG-----KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQL 76 (241)
T ss_pred EEeeEEEecCCc-----cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHH
Confidence 578888888531 2359999999999999999999999999999999999999999998865
Q ss_pred --eEEEEcCCCCCCC-ccHHHHHhcCCC------------CC---hhhHHHHHHHhcchHHHhhccCCCcccccCCCCcc
Q 000521 669 --SIAYVPQVPWILS-GTIRDNILFGKN------------YD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 730 (1446)
Q Consensus 669 --~i~yv~Q~p~l~~-~ti~~nI~~g~~------------~~---~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~L 730 (1446)
.++|++|++.++. .|++||+.++.. .. .++..+.++..++.. .....+.+|
T Consensus 77 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~L 145 (241)
T cd03256 77 RRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLD-----------KAYQRADQL 145 (241)
T ss_pred HhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChh-----------hhCCCcccC
Confidence 3899999998876 699999986531 01 122334444444432 234567799
Q ss_pred chHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-hCCEEEEEeCCEEE
Q 000521 731 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVK 808 (1446)
Q Consensus 731 SGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~ 808 (1446)
|||||||++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+. .||++++|++|+++
T Consensus 146 S~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~ 224 (241)
T cd03256 146 SGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDL-LKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIV 224 (241)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999988876 332122 3789999999999988 59999999999999
Q ss_pred EecChhHH
Q 000521 809 WIGSSADL 816 (1446)
Q Consensus 809 ~~g~~~~l 816 (1446)
+.|+++++
T Consensus 225 ~~~~~~~~ 232 (241)
T cd03256 225 FDGPPAEL 232 (241)
T ss_pred eecCHHHh
Confidence 99998876
No 413
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.4e-34 Score=323.39 Aligned_cols=197 Identities=26% Similarity=0.439 Sum_probs=163.9
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------eE
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------SI 670 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------~i 670 (1446)
+++|+++.|+.. . +++|+|+||++++||+++|+||||||||||+++|.|.++|++|+|.++| .+
T Consensus 2 ~~~~l~~~~~~~-~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i 77 (220)
T cd03263 2 QIRNLTKTYKKG-T---KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSL 77 (220)
T ss_pred EEEeeEEEeCCC-C---ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhE
Confidence 578899988532 1 2369999999999999999999999999999999999999999998876 38
Q ss_pred EEEcCCCCCC-CccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHH
Q 000521 671 AYVPQVPWIL-SGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 742 (1446)
Q Consensus 671 ~yv~Q~p~l~-~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lAR 742 (1446)
+|++|+|.++ +.|++||+.++.. .+ .++.+++++.+++.... .....+||||||||++|||
T Consensus 78 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~ 146 (220)
T cd03263 78 GYCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-----------NKRARTLSGGMKRKLSLAI 146 (220)
T ss_pred EEecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hChhhhCCHHHHHHHHHHH
Confidence 9999999888 5699999986421 12 13455666766664322 3344689999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHH
Q 000521 743 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 816 (1446)
Q Consensus 743 aly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 816 (1446)
|++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 147 al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 147 ALIGGPSVLLLDEPTSGLDPASRRAIWDL-ILE-VRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HHhcCCCEEEECCCCCCCCHHHHHHHHHH-HHH-HhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999988875 333 3446899999999999865 999999999999999988764
No 414
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2e-34 Score=320.25 Aligned_cols=195 Identities=24% Similarity=0.310 Sum_probs=163.9
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++|++++|++ .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNE--EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCC--ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 5999999999964 3699999999999999999999999999999999999999999999999998752 3466799
Q ss_pred EEeCCCCCCCC-cHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1298 VVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1298 ~VpQdp~lF~g-TIR~NLdp~~----~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
|+||+|.++++ |+++|+.... ...++.+.++++.. |++.........||+|||||++||||++++|
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~laral~~~p 156 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIV---------GLAGYEDTLVRQLSAGQKKRLALARLWLSPA 156 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHc---------CChhhccCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999887 9999985421 11222333444444 4443334445579999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeC
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDH 1426 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~ 1426 (1446)
++|+|||||++||.++.+.+.+.+++.. +++|+|++||+++.+.+ ||++++++.
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 157 PLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999999997653 47899999999999865 799999875
No 415
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.7e-34 Score=319.90 Aligned_cols=191 Identities=24% Similarity=0.328 Sum_probs=160.9
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------eEE
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SIA 671 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------~i~ 671 (1446)
+++|+++.|+. .++|+|+||++++|++++|+||||||||||+++|+|..+|++|+|.++| .++
T Consensus 2 ~~~~l~~~~~~------~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~ 75 (208)
T cd03268 2 KTNDLTKTYGK------KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIG 75 (208)
T ss_pred EEEEEEEEECC------eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEE
Confidence 57899998842 2359999999999999999999999999999999999999999999976 389
Q ss_pred EEcCCCCCC-CccHHHHHhcCC---CCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccC
Q 000521 672 YVPQVPWIL-SGTIRDNILFGK---NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 747 (1446)
Q Consensus 672 yv~Q~p~l~-~~ti~~nI~~g~---~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~ 747 (1446)
||+|++.++ +.|++||+.++. ..++++.+++++..+++... .....+||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSA-----------KKKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHH-----------hhhHhhCCHHHHHHHHHHHHHhcC
Confidence 999999877 469999997653 22455666777777775433 334568999999999999999999
Q ss_pred CCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 748 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 748 ~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELREL-ILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999988875 33212257899999999999865 9999999999998654
No 416
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.8e-34 Score=336.65 Aligned_cols=202 Identities=25% Similarity=0.382 Sum_probs=167.9
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------- 668 (1446)
..++++|+++.|.. ..+|+|+||+|++||+++++||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~i~i~~l~k~~~~------~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~ 79 (306)
T PRK13537 6 APIDFRNVEKRYGD------KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHAR 79 (306)
T ss_pred ceEEEEeEEEEECC------eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHH
Confidence 46899999999852 2359999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCCCCCC-ccHHHHHhc-CCCC--Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHH
Q 000521 669 -SIAYVPQVPWILS-GTIRDNILF-GKNY--DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 739 (1446)
Q Consensus 669 -~i~yv~Q~p~l~~-~ti~~nI~~-g~~~--~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~ 739 (1446)
.||||||+|.++. .|++||+.+ +..+ +. ++.+++++.+++.... .....+||||||||++
T Consensus 80 ~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~ 148 (306)
T PRK13537 80 QRVGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKA-----------DAKVGELSGGMKRRLT 148 (306)
T ss_pred hcEEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHh-----------cCchhhCCHHHHHHHH
Confidence 4999999999885 599999975 3211 21 2334555555554321 2334589999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHHh
Q 000521 740 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 740 lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
||||+.++|++++|||||++||+...+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 149 LARALVNDPDVLVLDEPTTGLDPQARHLMWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred HHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999988876 43312347899999999999876 99999999999999999999865
Q ss_pred c
Q 000521 819 S 819 (1446)
Q Consensus 819 ~ 819 (1446)
.
T Consensus 228 ~ 228 (306)
T PRK13537 228 S 228 (306)
T ss_pred c
Confidence 4
No 417
>KOG0060 consensus Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=2.6e-32 Score=318.08 Aligned_cols=336 Identities=22% Similarity=0.301 Sum_probs=244.6
Q ss_pred HHhhcchHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH----HHhhcCCCCcCcc
Q 000521 1078 TETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA----VIGSRGNLPATFS 1153 (1446)
Q Consensus 1078 ~Etl~Gl~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~----v~~~~~~~~~~~~ 1153 (1446)
++...+...|--|+.++.......+..++.-.......+...|+.+..+.+.- +..++..++ ++..+ .....
T Consensus 269 ~rlr~NaE~iAFY~g~~~E~~~~~~~f~~Lv~~l~~l~~~r~~l~f~~n~~~Y-lg~ilsy~vi~~p~Fs~h---~y~~~ 344 (659)
T KOG0060|consen 269 SRLRVNAEEIAFYRGGQVEHQRTDQRFRNLVQHLRELMSFRFWLGFIDNIFDY-LGGILSYVVIAIPFFSGH---VYDDL 344 (659)
T ss_pred eeeeecchhhhhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhheeeEEeeeeeccc---ccCCc
Confidence 45556777888888877666655555555555555566777888876665542 111111111 11111 12223
Q ss_pred cHHHH-HHHH---HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcC----C---c------cccc----c-CCCC--
Q 000521 1154 TPGLV-GLAL---SYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV----P---Q------EELC----G-YQSL-- 1209 (1446)
Q Consensus 1154 ~~g~v-gl~l---~~~~~~~~~l~~~i~~~~~~e~~~~sv~Ri~~~~~~----~---~------e~~~----~-~~~~-- 1209 (1446)
++... +..- .+.+.+.+.+..++....++..--+-..||-++.+. . + |+.. . ...+
T Consensus 345 s~aEL~~~i~~na~~~i~Li~~f~~l~~~~~~ls~lsGyt~Ri~el~~~l~d~~~~~~~~~~~~~~~~E~~~~l~~~~G~ 424 (659)
T KOG0060|consen 345 SPAELSGLISNNAFVFIYLISAFGRLVDLSRDLSRLSGYTHRIGELMEVLDDLSSGSQECTMEEEELGEAEWGLSLPPGS 424 (659)
T ss_pred CHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHHhccCCcchhhhhhhhhhhhhccCCCCCC
Confidence 34332 2222 122333444555555555555556667888877632 0 0 1100 0 0111
Q ss_pred CCCCCCCccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh
Q 000521 1210 SPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV 1289 (1446)
Q Consensus 1210 ~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~ 1289 (1446)
+..||.+..|+|++|++.=|.+.+...+|+||+|+.|+.+-|+|+||||||||++.|-|+.+..+|++.--...-
T Consensus 425 ~~~~~~Dn~i~~e~v~l~tPt~g~~lie~Ls~~V~~g~~LLItG~sG~GKtSLlRvlggLWp~~~G~l~k~~~~~----- 499 (659)
T KOG0060|consen 425 GKAEPADNAIEFEEVSLSTPTNGDLLIENLSLEVPSGQNLLITGPSGCGKTSLLRVLGGLWPSTGGKLTKPTDGG----- 499 (659)
T ss_pred cccccccceEEeeeeeecCCCCCceeeeeeeeEecCCCeEEEECCCCCchhHHHHHHhcccccCCCeEEecccCC-----
Confidence 345788889999999999876666677889999999999999999999999999999999999999987532110
Q ss_pred HhHhcceEEEeCCCCCCCCcHHHhcC-CC-------CCCChHHHHHHHHHccHHHHHHhC-CCchhhh-cCCCCCChhHH
Q 000521 1290 RDLRGRFAVVPQSPFLFEGSLRDNLD-PF-------HMNDDLKIWSVLEKCHVKEEVEAV-GLETFVK-ESGISFSVGQR 1359 (1446)
Q Consensus 1290 ~~lR~~i~~VpQdp~lF~gTIR~NLd-p~-------~~~~d~ei~~aL~~~~L~~~i~~l-gLdt~v~-e~G~~LSgGQr 1359 (1446)
-+.+-++||.|++-.||+|+-+- |. +..+|++|.+.|+.++|.+.++.. |+|+++. +....||+||+
T Consensus 500 ---~~~lfflPQrPYmt~GTLRdQvIYP~~~~~~~~~~~~d~~i~r~Le~v~L~hl~~r~ggld~~~~~dW~dvLS~GEq 576 (659)
T KOG0060|consen 500 ---PKDLFFLPQRPYMTLGTLRDQVIYPLKAEDMDSKSASDEDILRILENVQLGHLLEREGGLDQQVDWDWMDVLSPGEQ 576 (659)
T ss_pred ---CCceEEecCCCCccccchhheeeccCccccccccCCCHHHHHHHHHHhhhhhHHHHhCCCCchhhccHHhhcCHHHH
Confidence 04589999999999999999974 41 235799999999999999999888 9997665 55678999999
Q ss_pred HHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhhcCEEEEEeCC
Q 000521 1360 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHG 1427 (1446)
Q Consensus 1360 Qrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrIlvl~~G 1427 (1446)
||+|+||.++.+|++-+|||+|||||.+.|..+.+.+++. +-|.|.|.||-+.-+.-|.++-|+.+
T Consensus 577 QRLa~ARLfy~kPk~AiLDE~TSAv~~dvE~~~Yr~~r~~--giT~iSVgHRkSL~kfHd~~L~~~g~ 642 (659)
T KOG0060|consen 577 QRLAFARLFYHKPKFAILDECTSAVTEDVEGALYRKCREM--GITFISVGHRKSLWKFHDYVLRMDGR 642 (659)
T ss_pred HHHHHHHHHhcCCceEEeechhhhccHHHHHHHHHHHHHc--CCeEEEeccHHHHHhhhhEEEEecCC
Confidence 9999999999999999999999999999999999999885 89999999999988889999999864
No 418
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=324.96 Aligned_cols=198 Identities=25% Similarity=0.341 Sum_probs=162.9
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|+.... ..++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~--~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 82 (233)
T PRK11629 5 LLQCDNLCKRYQEGSV--QTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKA 82 (233)
T ss_pred eEEEEeEEEEcCCCCc--ceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHH
Confidence 4789999999964211 12469999999999999999999999999999999999999999998875
Q ss_pred -----eEEEEcCCCCCCCc-cHHHHHhcCC---CCCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000521 669 -----SIAYVPQVPWILSG-TIRDNILFGK---NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1446)
Q Consensus 669 -----~i~yv~Q~p~l~~~-ti~~nI~~g~---~~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 735 (1446)
.++|++|+|.+++. |++||+.++. ..++ ++..++++.+++... ......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~~ 151 (233)
T PRK11629 83 ELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHR-----------ANHRPSELSGGER 151 (233)
T ss_pred HHHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHH
Confidence 38999999988865 9999998642 1222 234556666655432 3445678999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhhCCEEEEEeCCEEEEecC
Q 000521 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 812 (1446)
Q Consensus 736 qRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~ 812 (1446)
||++||||++.+|+++||||||++||+.+.+.+.+. +.... .+|+|+|++||+++.+..+|++++|++|++++.|+
T Consensus 152 qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 152 QRVAIARALVNNPRLVLADEPTGNLDARNADSIFQL-LGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999988875 33211 24789999999999998889999999999988765
No 419
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.3e-34 Score=325.10 Aligned_cols=199 Identities=25% Similarity=0.361 Sum_probs=164.5
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------e
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 669 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------~ 669 (1446)
++++|++++|+. +++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 2 l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~ 75 (236)
T TIGR03864 2 LEVAGLSFAYGA------RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALAR 75 (236)
T ss_pred EEEEeeEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhh
Confidence 568899998852 2359999999999999999999999999999999999999999998876 3
Q ss_pred EEEEcCCCCCC-CccHHHHHhcCCC---CChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000521 670 IAYVPQVPWIL-SGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1446)
Q Consensus 670 i~yv~Q~p~l~-~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lA 741 (1446)
++|++|++.++ +.|++||+.++.. .+++ +..+.++..++. ...+....+||||||||++||
T Consensus 76 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrl~la 144 (236)
T TIGR03864 76 LGVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLA-----------ERADDKVRELNGGHRRRVEIA 144 (236)
T ss_pred EEEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------hhhcCChhhCCHHHHHHHHHH
Confidence 89999999874 6799999986532 2221 233344444443 234556679999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHHh
Q 000521 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 742 Raly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
||++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+..||++++|++|++++.|+++++..
T Consensus 145 ral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (236)
T TIGR03864 145 RALLHRPALLLLDEPTVGLDPASRAAIVAH-VRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRG 221 (236)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHH
Confidence 999999999999999999999999998876 33212 24789999999999988899999999999999999888754
No 420
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.2e-34 Score=323.65 Aligned_cols=191 Identities=26% Similarity=0.369 Sum_probs=156.4
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--------------
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 668 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-------------- 668 (1446)
+++|++++|+.... ..++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~~~~--~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (218)
T cd03255 2 ELKNLSKTYGGGGE--KVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAF 79 (218)
T ss_pred eEeeeEEEecCCCc--ceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHH
Confidence 57889998853210 12469999999999999999999999999999999999999999998764
Q ss_pred ---eEEEEcCCCCCCCc-cHHHHHhcCCCC---C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 ---SIAYVPQVPWILSG-TIRDNILFGKNY---D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~~~-ti~~nI~~g~~~---~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
.++|++|+|.++.. |++||+.++..+ + +++.+++++..+++.. ......+||||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr 148 (218)
T cd03255 80 RRRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDR-----------LNHYPSELSGGQQQR 148 (218)
T ss_pred HhhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchh-----------hhcChhhcCHHHHHH
Confidence 38999999998876 999999875432 1 2344555666555432 234556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhhCCEEEEEeCCEE
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQV 807 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i 807 (1446)
++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+..||++++|++|++
T Consensus 149 v~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 149 VAIARALANDPKIILADEPTGNLDSETGKEVMEL-LRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 9999999999999999999999999999988875 333122 37899999999998888999999999974
No 421
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-34 Score=325.80 Aligned_cols=197 Identities=29% Similarity=0.365 Sum_probs=164.9
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--------eEE
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIA 671 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~--------~i~ 671 (1446)
..++++|++++|.. .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++
T Consensus 11 ~~l~i~~l~~~~~~------~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~ 84 (257)
T PRK11247 11 TPLLLNAVSKRYGE------RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTR 84 (257)
T ss_pred CcEEEEEEEEEECC------cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceE
Confidence 45899999999852 2359999999999999999999999999999999999999999998876 489
Q ss_pred EEcCCCCCCC-ccHHHHHhcCCCC-ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCC
Q 000521 672 YVPQVPWILS-GTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSD 749 (1446)
Q Consensus 672 yv~Q~p~l~~-~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~ 749 (1446)
|++|+|.+++ .|++||+.++... .+++..+.++..++... ......+||||||||++||||+..+|+
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADR-----------ANEWPAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhH-----------hcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999998886 6999999876321 23455666666666533 244567899999999999999999999
Q ss_pred EEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChh
Q 000521 750 IYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 814 (1446)
Q Consensus 750 illLDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~ 814 (1446)
++||||||++||+.+.+.+.+. +.... ..++|+|++||+++.+.. ||+|++|++|++++.|+.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDL-IESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999988775 33211 237899999999998754 9999999999999877643
No 422
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.1e-34 Score=322.53 Aligned_cols=198 Identities=27% Similarity=0.413 Sum_probs=161.2
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--------------
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 668 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-------------- 668 (1446)
+++|+++.|+. . ++++|+||++++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 75 (222)
T cd03224 2 EVENLNAGYGK---S---QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARA 75 (222)
T ss_pred EEeeEEeecCC---e---eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhc
Confidence 57888988852 2 359999999999999999999999999999999999999999998865
Q ss_pred eEEEEcCCCCCCCc-cHHHHHhcCCCCC-h----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHH
Q 000521 669 SIAYVPQVPWILSG-TIRDNILFGKNYD-P----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 742 (1446)
Q Consensus 669 ~i~yv~Q~p~l~~~-ti~~nI~~g~~~~-~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lAR 742 (1446)
.++|++|++.++.. |++||+.++.... . ++.+++++... .+ ......+..+||||||||++|||
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~------~l----~~~~~~~~~~LS~G~~qrv~lar 145 (222)
T cd03224 76 GIGYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP------RL----KERRKQLAGTLSGGEQQMLAIAR 145 (222)
T ss_pred CeEEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH------hh----hhhhhCchhhCCHHHHHHHHHHH
Confidence 38999999988876 9999998764321 1 12223333321 11 12235567789999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHH
Q 000521 743 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 817 (1446)
Q Consensus 743 aly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~ 817 (1446)
|+..+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++.+.|+.+++.
T Consensus 146 al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 146 ALMSRPKLLLLDEPSEGLAPKIVEEIFEA-IRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HHhcCCCEEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 99999999999999999999999988876 33312257899999999998765 9999999999999999887764
No 423
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=332.79 Aligned_cols=206 Identities=25% Similarity=0.397 Sum_probs=167.8
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|..... ...++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~~~~~~~-~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13641 2 SIKFENVDYIYSPGTP-MEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNL 80 (287)
T ss_pred EEEEEEEEEEcCCCCC-ccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 4678999999963211 012469999999999999999999999999999999999999999998865
Q ss_pred -----eEEEEcCCC--CCCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000521 669 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1446)
Q Consensus 669 -----~i~yv~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 734 (1446)
.++|++|+| .+++.|++|||.++.. .+. ++.+++++.++++.+. ......+|||||
T Consensus 81 ~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq 150 (287)
T PRK13641 81 KKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDL----------ISKSPFELSGGQ 150 (287)
T ss_pred HHHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhH----------hhCCcccCCHHH
Confidence 379999998 5777899999987531 222 2345556666664222 234567899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-hCCEEEEEeCCEEEEecCh
Q 000521 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSS 813 (1446)
Q Consensus 735 kqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~ 813 (1446)
|||++||||+..+|+++||||||++||+...+.+.+. +.....+|.|+|++||+++.+. .||++++|++|++++.|++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~-l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~ 229 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQL-FKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASP 229 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999998888775 4331235789999999999876 4999999999999999999
Q ss_pred hHHHh
Q 000521 814 ADLAV 818 (1446)
Q Consensus 814 ~~l~~ 818 (1446)
+++..
T Consensus 230 ~~~~~ 234 (287)
T PRK13641 230 KEIFS 234 (287)
T ss_pred HHHhc
Confidence 88754
No 424
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.8e-34 Score=320.97 Aligned_cols=191 Identities=30% Similarity=0.422 Sum_probs=157.4
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------eEE
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SIA 671 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------~i~ 671 (1446)
+++|+++.|+. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .++
T Consensus 2 ~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~ 75 (213)
T cd03301 2 ELENVTKRFGN------VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIA 75 (213)
T ss_pred EEEeeEEEECC------eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEE
Confidence 57889998853 2359999999999999999999999999999999999999999999875 389
Q ss_pred EEcCCCCCCC-ccHHHHHhcCCC---CChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHH
Q 000521 672 YVPQVPWILS-GTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 743 (1446)
Q Consensus 672 yv~Q~p~l~~-~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARa 743 (1446)
|++|++.+++ .|++||+.++.. .+++ +..+.++..+++.. ......+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHL-----------LDRKPKQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHH-----------HhCChhhCCHHHHHHHHHHHH
Confidence 9999999885 599999987522 2222 33444555555432 344556899999999999999
Q ss_pred HccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 744 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 744 ly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
++.+|++++|||||++||+.+.+.+.+. +..... +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAE-LKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999999988876 332122 37899999999998765 9999999999998765
No 425
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-34 Score=323.74 Aligned_cols=202 Identities=28% Similarity=0.402 Sum_probs=164.6
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|+++.|..... ..++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~~~~l~~~~~~~~~--~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (233)
T cd03258 2 IELKNVSKVFGDTGG--KVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRK 79 (233)
T ss_pred eEEecceEEccCCCC--ceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHH
Confidence 578899999853210 12469999999999999999999999999999999999999999998864
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
.++|++|+|.++. .|++||+.++.. .+. ++..+.++..++... ......+||||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr 148 (233)
T cd03258 80 ARRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDK-----------ADAYPAQLSGGQKQR 148 (233)
T ss_pred HHhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhcChhhCCHHHHHH
Confidence 3899999999986 599999987532 222 233444555555432 234557899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhH
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 815 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 815 (1446)
++||||+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 149 v~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (233)
T cd03258 149 VGIARALANNPKVLLCDEATSALDPETTQSILAL-LRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEE 227 (233)
T ss_pred HHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 9999999999999999999999999999988876 332122 37899999999999865 99999999999999999887
Q ss_pred HH
Q 000521 816 LA 817 (1446)
Q Consensus 816 l~ 817 (1446)
+.
T Consensus 228 ~~ 229 (233)
T cd03258 228 VF 229 (233)
T ss_pred Hh
Confidence 64
No 426
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=1.5e-33 Score=318.84 Aligned_cols=162 Identities=22% Similarity=0.300 Sum_probs=126.1
Q ss_pred EEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEEEeCCCC-CCCCcHHHhcCCCC--
Q 000521 1242 TIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPF-LFEGSLRDNLDPFH-- 1318 (1446)
Q Consensus 1242 ~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~-lF~gTIR~NLdp~~-- 1318 (1446)
+|..||.+|++||+|-||||++++|.|.++|++|+ ..+ -+++|=||--. -|+|||++-|.--.
T Consensus 363 ~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~----------~~vSyKPQyI~~~~~gtV~~~l~~~~~~ 428 (591)
T COG1245 363 EIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EED----------LKVSYKPQYISPDYDGTVEDLLRSAIRS 428 (591)
T ss_pred eeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Ccc----------ceEeecceeecCCCCCcHHHHHHHhhhh
Confidence 34567899999999999999999999999999998 222 25788888543 38999988763111
Q ss_pred CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHH
Q 000521 1319 MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISS 1398 (1446)
Q Consensus 1319 ~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~ 1398 (1446)
.+.+.-.+ .+.++.+.|+-.+...-.+|||||.||+++|-||.|++++++||||++.||.+-.-.+-++||+
T Consensus 429 ~~~~s~~~--------~ei~~pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakvIRR 500 (591)
T COG1245 429 AFGSSYFK--------TEIVKPLNLEDLLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKVIRR 500 (591)
T ss_pred hcccchhH--------HhhcCccchHHHHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHHHHH
Confidence 01111111 1223334555556655667999999999999999999999999999999999998888888887
Q ss_pred hc--CCcEEEEeccCchhHhh-cCEEEEEe
Q 000521 1399 EC--KGMTVITIAHRISTVLN-MDEILILD 1425 (1446)
Q Consensus 1399 ~~--~~~TvI~IaHrl~ti~~-~DrIlvl~ 1425 (1446)
.. .++|.++|-|++-.+.. +||++|.+
T Consensus 501 ~~e~~~kta~vVdHDi~~~dyvsDr~ivF~ 530 (591)
T COG1245 501 FIENNEKTALVVDHDIYMIDYVSDRLIVFE 530 (591)
T ss_pred HHhhcCceEEEEecceehhhhhhceEEEEe
Confidence 53 58899999999988764 79999986
No 427
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-34 Score=325.78 Aligned_cols=200 Identities=25% Similarity=0.388 Sum_probs=163.3
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------e
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 669 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-------------~ 669 (1446)
+++|++++|+.. ..+|+|+||++++|++++|+||||||||||+++|.|+++|++|+|.++| .
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (242)
T cd03295 2 EFENVTKRYGGG-----KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRK 76 (242)
T ss_pred EEEEEEEEeCCc-----ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcc
Confidence 578899988531 2359999999999999999999999999999999999999999998875 4
Q ss_pred EEEEcCCCCCCC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000521 670 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1446)
Q Consensus 670 i~yv~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lA 741 (1446)
++|++|+|.++. .|++||+.++.. .+. ++..++++..++.. .......+.+||||||||++||
T Consensus 77 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~la 147 (242)
T cd03295 77 IGYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVA 147 (242)
T ss_pred eEEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHH
Confidence 899999999886 599999987532 221 23344455554432 0123456679999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHH
Q 000521 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 817 (1446)
Q Consensus 742 Raly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~ 817 (1446)
||++.+|++++|||||++||+.+.+.+.+. +..... +++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 ral~~~p~llllDEPt~~LD~~~~~~l~~~-L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 224 (242)
T cd03295 148 RALAADPPLLLMDEPFGALDPITRDQLQEE-FKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEIL 224 (242)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999998888776 332122 37899999999998654 9999999999999999888764
No 428
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=358.91 Aligned_cols=211 Identities=24% Similarity=0.352 Sum_probs=176.5
Q ss_pred EEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCCh-HhHhcceEEE
Q 000521 1221 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRFAVV 1299 (1446)
Q Consensus 1221 f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i~~V 1299 (1446)
++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+|++++|+
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999964 369999999999999999999999999999999999999999999999999976654 4457889999
Q ss_pred eCCCCCCCC-cHHHhcCCCCC------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1300 PQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1300 pQdp~lF~g-TIR~NLdp~~~------~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
||++.+|.. |+++|+..... .+.++.++ ...+.++.+|++........+||||||||++|||||+++|
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~lA~al~~~p 153 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR-----DTKAIFDELDIDIDPRAKVATLSVSQMQMIEIAKAFSYNA 153 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHH-----HHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHHhCC
Confidence 999987764 99999975321 12222221 1234455557766556666789999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
++|||||||++||.++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|.+..+
T Consensus 154 ~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 221 (491)
T PRK10982 154 KIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGL 221 (491)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhC
Confidence 9999999999999999999999998753 47899999999998865 899999999999999887543
No 429
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-34 Score=328.54 Aligned_cols=206 Identities=25% Similarity=0.327 Sum_probs=171.9
Q ss_pred CCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEeC----
Q 000521 598 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG---- 668 (1446)
Q Consensus 598 ~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~-----~~~G~i~~~~---- 668 (1446)
....++++|+++.|+. +++|+|+||++++||+++|+||||||||||+++|.|+++ |++|+|.++|
T Consensus 17 ~~~~l~~~nl~~~~~~------~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~ 90 (267)
T PRK14237 17 EEIALSTKDLHVYYGK------KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDIN 90 (267)
T ss_pred CCeEEEEeeEEEEECC------eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcc
Confidence 4457899999999842 235999999999999999999999999999999999996 5899998765
Q ss_pred -----------eEEEEcCCCCCCCccHHHHHhcCCC----CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000521 669 -----------SIAYVPQVPWILSGTIRDNILFGKN----YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 729 (1446)
Q Consensus 669 -----------~i~yv~Q~p~l~~~ti~~nI~~g~~----~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~ 729 (1446)
.++|++|+|.+++.|++|||.++.. .+ +++..++++.+++..++. +..+..+.+
T Consensus 91 ~~~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~ 163 (267)
T PRK14237 91 RKEINVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALT 163 (267)
T ss_pred cccCChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCccc
Confidence 3899999999998999999987532 12 133455666776654432 234667789
Q ss_pred cchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEE
Q 000521 730 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK 808 (1446)
Q Consensus 730 LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~ 808 (1446)
||||||||++||||++.+|++++|||||++||+.+.+++.+. +.. +.++.|+|++||+++.+.. ||++++|++|+++
T Consensus 164 LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~ 241 (267)
T PRK14237 164 LSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEET-MFE-LKKNYTIIIVTHNMQQAARASDYTAFFYLGDLI 241 (267)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEecCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999888875 333 3456899999999998765 9999999999999
Q ss_pred EecChhHHHh
Q 000521 809 WIGSSADLAV 818 (1446)
Q Consensus 809 ~~g~~~~l~~ 818 (1446)
+.|+++++..
T Consensus 242 ~~g~~~~~~~ 251 (267)
T PRK14237 242 EYDKTRNIFT 251 (267)
T ss_pred EeCCHHHHhc
Confidence 9999988753
No 430
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.9e-34 Score=320.64 Aligned_cols=188 Identities=32% Similarity=0.437 Sum_probs=154.5
Q ss_pred EEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--------eEEEEcC
Q 000521 604 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAYVPQ 675 (1446)
Q Consensus 604 ~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~--------~i~yv~Q 675 (1446)
++|+++.|+. .++++|+||++++||+++|+||||||||||+++|.|+++|++|+|.++| .++|++|
T Consensus 2 ~~~l~~~~~~------~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q 75 (213)
T cd03235 2 VEDLTVSYGG------HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQ 75 (213)
T ss_pred cccceeEECC------EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEecc
Confidence 4677888742 2359999999999999999999999999999999999999999999987 3999999
Q ss_pred CCCC---CCccHHHHHhcCCCC-----------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000521 676 VPWI---LSGTIRDNILFGKNY-----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1446)
Q Consensus 676 ~p~l---~~~ti~~nI~~g~~~-----------~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lA 741 (1446)
+|.+ ++.|++||+.++... ++++.+++++.++++.... ....+||||||||++||
T Consensus 76 ~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la 144 (213)
T cd03235 76 RRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELAD-----------RQIGELSGGQQQRVLLA 144 (213)
T ss_pred ccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHHHHH
Confidence 9976 557999999875321 1234566677777654332 34568999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEe
Q 000521 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 810 (1446)
Q Consensus 742 Raly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 810 (1446)
||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++| +++.
T Consensus 145 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~ 212 (213)
T cd03235 145 RALVQDPDLLLLDEPFAGVDPKTQEDIYEL-LRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVAS 212 (213)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-Eeec
Confidence 999999999999999999999999988876 33212257899999999999865 9999999886 4443
No 431
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.5e-34 Score=324.10 Aligned_cols=197 Identities=26% Similarity=0.372 Sum_probs=162.2
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--------------
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 668 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-------------- 668 (1446)
+++|+++.|+. +.+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 75 (232)
T cd03218 2 RAENLSKRYGK------RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARL 75 (232)
T ss_pred eEEEEEEEeCC------EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhc
Confidence 57889998852 2359999999999999999999999999999999999999999998865
Q ss_pred eEEEEcCCCCCCCc-cHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHH
Q 000521 669 SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 740 (1446)
Q Consensus 669 ~i~yv~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~l 740 (1446)
.++|++|++.+++. |++||+.++.+ .+. ++.++.++..++. ........+||||||||++|
T Consensus 76 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrl~l 144 (232)
T cd03218 76 GIGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHIT-----------HLRKSKASSLSGGERRRVEI 144 (232)
T ss_pred cEEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------hhhhCChhhCCHHHHHHHHH
Confidence 38999999988876 99999987532 111 1233444444443 23355667999999999999
Q ss_pred HHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHH
Q 000521 741 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 817 (1446)
Q Consensus 741 ARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~ 817 (1446)
|||+..+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++.+.|+.+++.
T Consensus 145 a~al~~~p~llllDEPt~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 221 (232)
T cd03218 145 ARALATNPKFLLLDEPFAGVDPIAVQDIQKI-IKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIA 221 (232)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhh
Confidence 9999999999999999999999999988875 33212347899999999987665 9999999999999999888764
No 432
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.9e-34 Score=342.72 Aligned_cols=200 Identities=26% Similarity=0.402 Sum_probs=168.1
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|++++|.. ..+|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.++|
T Consensus 3 ~L~~~nls~~y~~------~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~ 76 (402)
T PRK09536 3 MIDVSDLSVEFGD------TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAAS 76 (402)
T ss_pred eEEEeeEEEEECC------EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHh
Confidence 4788999999852 2359999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCCCC-CCccHHHHHhcCCC-----C------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000521 669 -SIAYVPQVPWI-LSGTIRDNILFGKN-----Y------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1446)
Q Consensus 669 -~i~yv~Q~p~l-~~~ti~~nI~~g~~-----~------~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 735 (1446)
++|||+|++.+ ++.|++||+.++.. + +.++.+++++..++.... .....+||||||
T Consensus 77 ~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~-----------~~~~~~LSgGer 145 (402)
T PRK09536 77 RRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFA-----------DRPVTSLSGGER 145 (402)
T ss_pred cceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHH
Confidence 39999999987 56799999988642 1 123455666666664322 334568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-hCCEEEEEeCCEEEEecChh
Q 000521 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 814 (1446)
Q Consensus 736 qRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 814 (1446)
||++|||||+++|+++||||||++||+.....+++. +.....+++|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 146 QRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~l-L~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ 224 (402)
T PRK09536 146 QRVLLARALAQATPVLLLDEPTASLDINHQVRTLEL-VRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPA 224 (402)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHH
Confidence 999999999999999999999999999998888865 3321224789999999999985 59999999999999999999
Q ss_pred HHHh
Q 000521 815 DLAV 818 (1446)
Q Consensus 815 ~l~~ 818 (1446)
++..
T Consensus 225 ev~~ 228 (402)
T PRK09536 225 DVLT 228 (402)
T ss_pred HHhC
Confidence 8754
No 433
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.3e-34 Score=334.92 Aligned_cols=202 Identities=26% Similarity=0.389 Sum_probs=166.6
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------- 668 (1446)
..++++|+++.|.. ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~~i~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 76 (303)
T TIGR01288 3 VAIDLVGVSKSYGD------KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLAR 76 (303)
T ss_pred cEEEEEeEEEEeCC------eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHh
Confidence 46889999999852 2359999999999999999999999999999999999999999999875
Q ss_pred -eEEEEcCCCCCCC-ccHHHHHhc-CC--CCCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHH
Q 000521 669 -SIAYVPQVPWILS-GTIRDNILF-GK--NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 739 (1446)
Q Consensus 669 -~i~yv~Q~p~l~~-~ti~~nI~~-g~--~~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~ 739 (1446)
.+||++|++.++. .|++||+.+ +. ..+. ++.+++++.+++... ......+||||||||++
T Consensus 77 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-----------~~~~~~~LSgG~~qrv~ 145 (303)
T TIGR01288 77 VAIGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-----------ADVRVALLSGGMKRRLT 145 (303)
T ss_pred hcEEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhH-----------hcCchhhCCHHHHHHHH
Confidence 4999999998885 599999974 22 1222 223344555554322 23345689999999999
Q ss_pred HHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHHh
Q 000521 740 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 740 lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
||||+..+|+++||||||++||+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 146 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 146 LARALINDPQLLILDEPTTGLDPHARHLIWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999988876 33212357899999999999865 99999999999999999999864
Q ss_pred c
Q 000521 819 S 819 (1446)
Q Consensus 819 ~ 819 (1446)
.
T Consensus 225 ~ 225 (303)
T TIGR01288 225 E 225 (303)
T ss_pred h
Confidence 3
No 434
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=330.64 Aligned_cols=206 Identities=24% Similarity=0.376 Sum_probs=170.9
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|++++|+...+...+++|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 47899999999643210123469999999999999999999999999999999999999999998875
Q ss_pred --eEEEEcCCCC--CCCccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 --SIAYVPQVPW--ILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 --~i~yv~Q~p~--l~~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
.++|++|+|. +++.|+.||+.|+.. .+ +++.+++++.++|..... ....+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRR-----------HAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHH
Confidence 3899999985 666799999998632 12 234566777777764433 3446899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHH
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 816 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l 816 (1446)
++||||++.+|+++||||||++||+.+.+.+.+. +..... ++.|+|++||+++.+..||++++|++|++++.|+++++
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNT-IKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEI 231 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988875 333112 37899999999999888999999999999999999988
Q ss_pred Hh
Q 000521 817 AV 818 (1446)
Q Consensus 817 ~~ 818 (1446)
..
T Consensus 232 ~~ 233 (280)
T PRK13633 232 FK 233 (280)
T ss_pred hc
Confidence 54
No 435
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-34 Score=328.13 Aligned_cols=205 Identities=23% Similarity=0.343 Sum_probs=170.2
Q ss_pred CCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEeC----
Q 000521 598 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG---- 668 (1446)
Q Consensus 598 ~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~-----~~G~i~~~~---- 668 (1446)
.+..++++|+++.|.. . ++|+|+||+|++|++++|+||||||||||+++|.|+++| ++|+|.++|
T Consensus 16 ~~~~l~~~nl~~~~~~---~---~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~ 89 (267)
T PRK14235 16 TEIKMRARDVSVFYGE---K---QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIY 89 (267)
T ss_pred CCceEEEEeEEEEECC---E---EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECc
Confidence 3457899999999852 2 359999999999999999999999999999999999975 899998865
Q ss_pred -----------eEEEEcCCCCCCCccHHHHHhcCCC---C--C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000521 669 -----------SIAYVPQVPWILSGTIRDNILFGKN---Y--D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 728 (1446)
Q Consensus 669 -----------~i~yv~Q~p~l~~~ti~~nI~~g~~---~--~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~ 728 (1446)
.++|++|+|.+++.|++||+.++.. . . .++.+++++.+++..++. +..+..+.
T Consensus 90 ~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~ 162 (267)
T PRK14235 90 DPRLDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGT 162 (267)
T ss_pred ccccchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcc
Confidence 3899999999998899999987531 1 1 123455666666644322 22356678
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEE
Q 000521 729 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 807 (1446)
Q Consensus 729 ~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i 807 (1446)
+||||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i 240 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEEL-IDE-LRQNYTIVIVTHSMQQAARVSQRTAFFHLGNL 240 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHH-HHH-HhcCCeEEEEEcCHHHHHhhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999988875 433 3446899999999999865 999999999999
Q ss_pred EEecChhHHH
Q 000521 808 KWIGSSADLA 817 (1446)
Q Consensus 808 ~~~g~~~~l~ 817 (1446)
++.|+.+++.
T Consensus 241 ~~~g~~~~~~ 250 (267)
T PRK14235 241 VEVGDTEKMF 250 (267)
T ss_pred EEeCCHHHHH
Confidence 9999988875
No 436
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.5e-34 Score=309.02 Aligned_cols=166 Identities=33% Similarity=0.550 Sum_probs=148.8
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------e
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 669 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------~ 669 (1446)
++++|+++.|+... +++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (178)
T cd03247 1 LSINNVSFSYPEQE----QQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSL 76 (178)
T ss_pred CEEEEEEEEeCCCC----ccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhh
Confidence 35789999985321 2359999999999999999999999999999999999999999999886 3
Q ss_pred EEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCC
Q 000521 670 IAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSD 749 (1446)
Q Consensus 670 i~yv~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~ 749 (1446)
++|++|+|++++.|++||| ..+||||||||++||||++.+|+
T Consensus 77 i~~~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~ 118 (178)
T cd03247 77 ISVLNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAP 118 (178)
T ss_pred EEEEccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCC
Confidence 8999999999999999998 45899999999999999999999
Q ss_pred EEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCCEEEEec
Q 000521 750 IYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 750 illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g 811 (1446)
+++|||||++||+.+.+.+++. +.. +.+++|+|++||+.+.++.||++++|++|++++.|
T Consensus 119 ~lllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 119 IVLLDEPTVGLDPITERQLLSL-IFE-VLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEEECCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999988876 333 34578999999999999889999999999998654
No 437
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-34 Score=326.88 Aligned_cols=203 Identities=26% Similarity=0.320 Sum_probs=168.0
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcC---ccC--CCcEEEEeC-------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGE---MML--THGSIHASG------- 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~---~~~--~~G~i~~~~------- 668 (1446)
.++++|+++.|.. ..+|+|+||++++||+++|+||||||||||+++|.|. .++ ++|+|.++|
T Consensus 3 ~l~~~~~~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~ 76 (250)
T PRK14245 3 KIDARDVNFWYGD------FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKG 76 (250)
T ss_pred EEEEEEEEEEECC------EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEeccccc
Confidence 5789999999852 2359999999999999999999999999999999996 454 589998764
Q ss_pred --------eEEEEcCCCCCCCccHHHHHhcCCC----CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 669 --------SIAYVPQVPWILSGTIRDNILFGKN----YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 669 --------~i~yv~Q~p~l~~~ti~~nI~~g~~----~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
.++|++|+|.+++.|++||+.++.. .+ +++.+++++.+++..++. +..+..+.+|||
T Consensus 77 ~~~~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 149 (250)
T PRK14245 77 VQVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSG 149 (250)
T ss_pred ccHHHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCH
Confidence 3899999999998899999987532 11 123455666666644332 234567789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 150 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~ 227 (250)
T PRK14245 150 GQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEEL-IHE-LKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYD 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999988876 333 3457899999999999865 9999999999999999
Q ss_pred ChhHHHh
Q 000521 812 SSADLAV 818 (1446)
Q Consensus 812 ~~~~l~~ 818 (1446)
+++++..
T Consensus 228 ~~~~~~~ 234 (250)
T PRK14245 228 DTKKIFT 234 (250)
T ss_pred CHHHHhc
Confidence 9998854
No 438
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-34 Score=326.67 Aligned_cols=204 Identities=23% Similarity=0.338 Sum_probs=167.3
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCcc--C---CCcEEEEeC------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM--L---THGSIHASG------ 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~--~---~~G~i~~~~------ 668 (1446)
..++++|+++.|.. .++|+|+||+|++||+++|+|+||||||||+++|.|.++ | ++|+|.++|
T Consensus 11 ~~l~i~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~ 84 (259)
T PRK14274 11 EVYQINGMNLWYGQ------HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKG 84 (259)
T ss_pred ceEEEeeEEEEECC------eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEcccc
Confidence 35899999999852 235999999999999999999999999999999999987 3 589998754
Q ss_pred ---------eEEEEcCCCCCCCccHHHHHhcCCCC----Chh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000521 669 ---------SIAYVPQVPWILSGTIRDNILFGKNY----DPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 731 (1446)
Q Consensus 669 ---------~i~yv~Q~p~l~~~ti~~nI~~g~~~----~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LS 731 (1446)
.+||++|+|.+++.|++||+.++... +++ +.+++++..++.+++. +..+..+.+||
T Consensus 85 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS 157 (259)
T PRK14274 85 KVDLVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLS 157 (259)
T ss_pred ccCHHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCC
Confidence 38999999999989999999875321 211 2334455555543221 23356778999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEe
Q 000521 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 810 (1446)
Q Consensus 732 GGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 810 (1446)
||||||++||||++.+|++++|||||++||+++.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.
T Consensus 158 ~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~ 235 (259)
T PRK14274 158 GGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEEL-ILK-LKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVEC 235 (259)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999998888765 433 3456899999999998765 999999999999999
Q ss_pred cChhHHHh
Q 000521 811 GSSADLAV 818 (1446)
Q Consensus 811 g~~~~l~~ 818 (1446)
|+++++..
T Consensus 236 g~~~~~~~ 243 (259)
T PRK14274 236 NDTNKMFS 243 (259)
T ss_pred CCHHHHhh
Confidence 99998754
No 439
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=330.88 Aligned_cols=203 Identities=28% Similarity=0.384 Sum_probs=169.4
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCC---cEEEEeC--------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH---GSIHASG-------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~---G~i~~~~-------- 668 (1446)
..++++|+++.|+... .++++|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|
T Consensus 4 ~~l~i~~l~~~~~~~~----~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~ 79 (282)
T PRK13640 4 NIVEFKHVSFTYPDSK----KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTV 79 (282)
T ss_pred ceEEEEEEEEEcCCCC----ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCH
Confidence 4588999999985321 235999999999999999999999999999999999999988 8998865
Q ss_pred -----eEEEEcCCCC--CCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000521 669 -----SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1446)
Q Consensus 669 -----~i~yv~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 734 (1446)
.++||+|+|+ +++.|++|||.++.. .++ ++..++++.++++... .....+|||||
T Consensus 80 ~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LS~G~ 148 (282)
T PRK13640 80 WDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYI-----------DSEPANLSGGQ 148 (282)
T ss_pred HHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHh-----------cCCcccCCHHH
Confidence 4899999995 567899999987632 222 2355666777775433 33446999999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhhCCEEEEEeCCEEEEecCh
Q 000521 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSS 813 (1446)
Q Consensus 735 kqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~ 813 (1446)
|||++||||++.+|+++||||||++||+.+.+.+.+. +..... .|+|+|++||+++.+..||++++|++|++++.|++
T Consensus 149 ~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~ 227 (282)
T PRK13640 149 KQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKL-IRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSP 227 (282)
T ss_pred HHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999988876 333122 37899999999999888999999999999999999
Q ss_pred hHHHh
Q 000521 814 ADLAV 818 (1446)
Q Consensus 814 ~~l~~ 818 (1446)
+++..
T Consensus 228 ~~~~~ 232 (282)
T PRK13640 228 VEIFS 232 (282)
T ss_pred HHHhc
Confidence 88754
No 440
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-34 Score=319.69 Aligned_cols=190 Identities=24% Similarity=0.353 Sum_probs=158.0
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------e
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 669 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------~ 669 (1446)
++++|+++.|.. . ++++|+||++++| +++|+||||||||||+++|.|+++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~---~---~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 73 (211)
T cd03264 1 LQLENLTKRYGK---K---RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRR 73 (211)
T ss_pred CEEEEEEEEECC---E---EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhh
Confidence 367899998853 2 3599999999999 9999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCCc-cHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000521 670 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1446)
Q Consensus 670 i~yv~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lA 741 (1446)
++|++|+|.++.. |++||+.+... .+ +++.+++++.+++....+ ....+||||||||++||
T Consensus 74 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la 142 (211)
T cd03264 74 IGYLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-----------KKIGSLSGGMRRRVGIA 142 (211)
T ss_pred eEEecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-----------CchhhCCHHHHHHHHHH
Confidence 8999999998876 99999986321 12 234456666666654322 34468999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 742 Raly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
||++++|+++||||||++||+.+.+++.+. +.. ..+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 143 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 143 QALVGDPSILIVDEPTAGLDPEERIRFRNL-LSE-LGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999999998876 333 3346899999999999865 9999999999998654
No 441
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.9e-34 Score=320.51 Aligned_cols=196 Identities=21% Similarity=0.337 Sum_probs=160.3
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------e
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 669 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------~ 669 (1446)
++++|+++.|+... ...++++|+||++++|++++|+|+||||||||+++|.|+++|++|+|.++| .
T Consensus 2 l~~~~v~~~~~~~~--~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (218)
T cd03266 2 ITADALTKRFRDVK--KTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRR 79 (218)
T ss_pred eEEEEEEEecCCCC--ccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhh
Confidence 57889999986421 112469999999999999999999999999999999999999999999875 4
Q ss_pred EEEEcCCCCCCCc-cHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000521 670 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1446)
Q Consensus 670 i~yv~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lA 741 (1446)
++|++|+|.+++. |++||+.+... .+ .++..+.++..++... ......+||||||||++||
T Consensus 80 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la 148 (218)
T cd03266 80 LGFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEEL-----------LDRRVGGFSTGMRQKVAIA 148 (218)
T ss_pred EEEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhhhhhhcCHHHHHHHHHH
Confidence 8999999998875 99999975321 12 2234555565555432 3456678999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 742 Raly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++.+.|
T Consensus 149 ral~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 149 RALVHDPPVLLLDEPTTGLDVMATRALREF-IRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHHhcCCCEEEEcCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999888876 33312347899999999998765 9999999999998654
No 442
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=330.54 Aligned_cols=201 Identities=23% Similarity=0.360 Sum_probs=168.7
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|+.. ..+++|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~-----~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~ 79 (283)
T PRK13636 5 ILKVEELNYNYSDG-----THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMK 79 (283)
T ss_pred eEEEEeEEEEeCCC-----CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHH
Confidence 58899999999521 2359999999999999999999999999999999999999999998876
Q ss_pred ---eEEEEcCCC--CCCCccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHH
Q 000521 669 ---SIAYVPQVP--WILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 736 (1446)
Q Consensus 669 ---~i~yv~Q~p--~l~~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkq 736 (1446)
.++|++|+| .+++.|++||+.++.. +. .++.+++++.++|... ......+|||||||
T Consensus 80 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LS~G~~q 148 (283)
T PRK13636 80 LRESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHL-----------KDKPTHCLSFGQKK 148 (283)
T ss_pred HHhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhCCcccCCHHHHH
Confidence 389999998 5778899999987532 22 1345556666666432 24567799999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-hCCEEEEEeCCEEEEecChh
Q 000521 737 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 814 (1446)
Q Consensus 737 Ri~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~ 814 (1446)
|++|||||+.+|+++||||||++||+.+.+.+.+. +..... .|+|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 149 rl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~ 227 (283)
T PRK13636 149 RVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKL-LVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPK 227 (283)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999988775 332122 2789999999999987 59999999999999999999
Q ss_pred HHHh
Q 000521 815 DLAV 818 (1446)
Q Consensus 815 ~l~~ 818 (1446)
++..
T Consensus 228 ~~~~ 231 (283)
T PRK13636 228 EVFA 231 (283)
T ss_pred HHhc
Confidence 8754
No 443
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=4.8e-34 Score=357.51 Aligned_cols=213 Identities=23% Similarity=0.363 Sum_probs=176.2
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEEcCeeCCCCChHh-Hhcc
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNIINTPVRD-LRGR 1295 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~--~~G~I~IDG~di~~i~~~~-lR~~ 1295 (1446)
|+++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+... .|++
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999963 3699999999999999999999999999999999999987 7999999999998877654 4678
Q ss_pred eEEEeCCCCCCCC-cHHHhcCCCCC-------CChHHHHHHHHHccHHHHHHhCCCchhh-hcCCCCCChhHHHHHHHHH
Q 000521 1296 FAVVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFV-KESGISFSVGQRQLICLAR 1366 (1446)
Q Consensus 1296 i~~VpQdp~lF~g-TIR~NLdp~~~-------~~d~ei~~aL~~~~L~~~i~~lgLdt~v-~e~G~~LSgGQrQrl~LAR 1366 (1446)
++||||+|.+|+. |+++|+..... .+.++..+ ...+.++.+|++... ......||||||||++|||
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~ 154 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYL-----RAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAK 154 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHH-----HHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHH
Confidence 9999999988875 99999865321 11111111 123344445665332 2334579999999999999
Q ss_pred HhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1367 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1367 ALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
||+++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.+.+..+
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (500)
T TIGR02633 155 ALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTM 228 (500)
T ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccC
Confidence 9999999999999999999999999999998753 47899999999999876 899999999999998887643
No 444
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=328.88 Aligned_cols=203 Identities=27% Similarity=0.414 Sum_probs=167.6
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------- 668 (1446)
..++++|+++.|+.. . +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~~~nl~~~~~~~-~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~ 81 (271)
T PRK13632 6 VMIKVENVSFSYPNS-E---NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEI 81 (271)
T ss_pred eEEEEEeEEEEcCCC-C---ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHH
Confidence 468899999998532 1 2459999999999999999999999999999999999999999998865
Q ss_pred --eEEEEcCCCC--CCCccHHHHHhcCCC---CChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 --SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 --~i~yv~Q~p~--l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
.++||+|+|. +++.|++|||.++.. ++.+ +..++++..++...+ .....+||||||||
T Consensus 82 ~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr 150 (271)
T PRK13632 82 RKKIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYL-----------DKEPQNLSGGQKQR 150 (271)
T ss_pred hcceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCCcccCCHHHHHH
Confidence 3899999984 556799999987532 3333 234555666665433 34557999999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccC-CceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHH
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML-QKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 816 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~-~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l 816 (1446)
++||||++.+|+++||||||++||+.+.+.+++. +.....+ ++|+|++||+++.+..||++++|++|++.+.|+.+++
T Consensus 151 l~laral~~~p~lllLDEP~~gLD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 229 (271)
T PRK13632 151 VAIASVLALNPEIIIFDESTSMLDPKGKREIKKI-MVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEI 229 (271)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988876 3321223 4899999999999888999999999999999998876
Q ss_pred Hh
Q 000521 817 AV 818 (1446)
Q Consensus 817 ~~ 818 (1446)
..
T Consensus 230 ~~ 231 (271)
T PRK13632 230 LN 231 (271)
T ss_pred hc
Confidence 53
No 445
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.8e-34 Score=315.56 Aligned_cols=194 Identities=23% Similarity=0.315 Sum_probs=163.4
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. . ..|++++
T Consensus 2 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~-~~~~~~~ 76 (207)
T PRK13539 2 MLEGEDLACVRGG--RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--P-DVAEACH 76 (207)
T ss_pred EEEEEeEEEEECC--eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--h-hhHhhcE
Confidence 3789999999964 369999999999999999999999999999999999999999999999999753 2 2788999
Q ss_pred EEeCCCCCC-CCcHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000521 1298 VVPQSPFLF-EGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1373 (1446)
Q Consensus 1298 ~VpQdp~lF-~gTIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1373 (1446)
+++|++.++ ..|+++|+.... ...++++.++++..++.+ ........||+|||||++||||++++|+
T Consensus 77 ~~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~---------~~~~~~~~LS~G~~qrl~la~al~~~p~ 147 (207)
T PRK13539 77 YLGHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLAP---------LAHLPFGYLSAGQKRRVALARLLVSNRP 147 (207)
T ss_pred EecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHH---------HHcCChhhcCHHHHHHHHHHHHHhcCCC
Confidence 999988765 579999986432 123444556666665543 2223334799999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHh-cCCcEEEEeccCchhHhhcCEEEEEeC
Q 000521 1374 VLCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEILILDH 1426 (1446)
Q Consensus 1374 ILlLDEaTS~lD~~Te~~Iq~~I~~~-~~~~TvI~IaHrl~ti~~~DrIlvl~~ 1426 (1446)
+|+|||||++||..+.+.+.+.|++. -+++|+|++||+++.+.. |+++.++.
T Consensus 148 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 148 IWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 99999999999999999999999864 358999999999999988 99988754
No 446
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-34 Score=327.10 Aligned_cols=205 Identities=25% Similarity=0.344 Sum_probs=168.2
Q ss_pred CceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEeC-----
Q 000521 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG----- 668 (1446)
Q Consensus 599 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~-----~~~G~i~~~~----- 668 (1446)
+..++++|+++.|.. ..+|+|+||+|++||+++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 11 ~~~l~i~nl~~~~~~------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~ 84 (269)
T PRK14259 11 NIIISLQNVTISYGT------FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYD 84 (269)
T ss_pred CceEEEEeEEEEECC------EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 356899999999853 235999999999999999999999999999999999987 6899998765
Q ss_pred ----------eEEEEcCCCCCCCccHHHHHhcCCCC---C---hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 669 ----------SIAYVPQVPWILSGTIRDNILFGKNY---D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 669 ----------~i~yv~Q~p~l~~~ti~~nI~~g~~~---~---~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
.++|++|+|.++..|++||+.++... + +++..++++.+++...+ .+.......+|||
T Consensus 85 ~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~ 157 (269)
T PRK14259 85 PRVDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDEC-------KDKLNESGYSLSG 157 (269)
T ss_pred ccCCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchh-------hhhhCCCcccCCH
Confidence 38999999999988999999876432 1 12334455555543222 1234566789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeC-------
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDK------- 804 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~------- 804 (1446)
|||||++||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||++++|++
T Consensus 158 G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~ 235 (269)
T PRK14259 158 GQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEET-MHE-LKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGS 235 (269)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhcCEEEEEecccccccc
Confidence 999999999999999999999999999999999988875 333 3456899999999998765 999999996
Q ss_pred ----CEEEEecChhHHHh
Q 000521 805 ----GQVKWIGSSADLAV 818 (1446)
Q Consensus 805 ----G~i~~~g~~~~l~~ 818 (1446)
|++++.|+.+++..
T Consensus 236 ~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 236 GGKVGYLVEFNETKKIFN 253 (269)
T ss_pred ccccceEEEeCCHHHHHh
Confidence 67899999888754
No 447
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-34 Score=317.38 Aligned_cols=190 Identities=27% Similarity=0.374 Sum_probs=157.7
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------eE
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 670 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------~i 670 (1446)
++++|+++.|+. . ..|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 1 i~~~~l~~~~~~----~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i 72 (211)
T cd03298 1 VRLDKIRFSYGE----Q----PMHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPV 72 (211)
T ss_pred CEEEeEEEEeCC----E----ecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccE
Confidence 357889998842 1 1399999999999999999999999999999999999999999976 38
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCCC-------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHH
Q 000521 671 AYVPQVPWILSG-TIRDNILFGKNY-------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 742 (1446)
Q Consensus 671 ~yv~Q~p~l~~~-ti~~nI~~g~~~-------~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lAR 742 (1446)
+|++|+|.++.. |++||+.++... ++++..++++.++++..... ...+||||||||++|||
T Consensus 73 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ia~ 141 (211)
T cd03298 73 SMLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKR-----------LPGELSGGERQRVALAR 141 (211)
T ss_pred EEEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHHHHHH
Confidence 999999998875 999999875321 13355666777777544433 34589999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 743 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 743 aly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
|++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 142 al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 142 VLVRDKPVLLLDEPFAALDPALRAEMLDL-VLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999988876 33211 237899999999999876 9999999999997653
No 448
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-34 Score=327.98 Aligned_cols=205 Identities=25% Similarity=0.306 Sum_probs=166.9
Q ss_pred CceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEeC-----
Q 000521 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG----- 668 (1446)
Q Consensus 599 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~-----~~~G~i~~~~----- 668 (1446)
+..++++|+++.|+. ..+|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 19 ~~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~ 92 (268)
T PRK14248 19 EHILEVKDLSIYYGE------KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILD 92 (268)
T ss_pred CceEEEEEEEEEeCC------ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccc
Confidence 346899999999852 235999999999999999999999999999999999864 6899998754
Q ss_pred ----------eEEEEcCCCCCCCccHHHHHhcCCCCC--------hhhHHHHHHHhcchHHHhhccCCCcccccCCCCcc
Q 000521 669 ----------SIAYVPQVPWILSGTIRDNILFGKNYD--------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 730 (1446)
Q Consensus 669 ----------~i~yv~Q~p~l~~~ti~~nI~~g~~~~--------~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~L 730 (1446)
.++|++|+|.+++.|++||+.++..+. +++..+.++.+++..++. ...+....+|
T Consensus 93 ~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~L 165 (268)
T PRK14248 93 SNINVVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSL 165 (268)
T ss_pred ccccHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccC
Confidence 489999999999899999998753211 122334444444432221 2345677899
Q ss_pred chHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEE
Q 000521 731 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKW 809 (1446)
Q Consensus 731 SGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~ 809 (1446)
|||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++
T Consensus 166 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~ 243 (268)
T PRK14248 166 SGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEEL-ITE-LKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVE 243 (268)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHH-HHH-HhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999988775 333 3446899999999998764 99999999999999
Q ss_pred ecChhHHHh
Q 000521 810 IGSSADLAV 818 (1446)
Q Consensus 810 ~g~~~~l~~ 818 (1446)
.|+++++..
T Consensus 244 ~~~~~~~~~ 252 (268)
T PRK14248 244 YDQTEQIFT 252 (268)
T ss_pred eCCHHHHHh
Confidence 999888753
No 449
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-34 Score=331.90 Aligned_cols=207 Identities=29% Similarity=0.405 Sum_probs=165.0
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------- 668 (1446)
..++++|+++.|+.... ...++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~i~nl~~~~~~~~~-~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 5 KDIILDNVSYTYAKKTP-FEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred ceEEEEEEEEEeCCCCc-cccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 35889999999964210 112469999999999999999999999999999999999999999998754
Q ss_pred -------eEEEEcCCCC--CCCccHHHHHhcCCC---CChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 669 -------SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 669 -------~i~yv~Q~p~--l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
.|+|++|+|. +++.|++|||.++.. .+.+ +..+.++..+|..+ ..+....+|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~----------~~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPED----------YVKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------HhcCChhhCCH
Confidence 3899999984 667899999987632 1221 22233444433211 13456678999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-hCCEEEEEeCCEEEEe
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWI 810 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~ 810 (1446)
|||||++||||++.+|+++||||||++||+.+.+.+++. +..... .++|+|++||+++.+. .||+|++|++|++++.
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~ 232 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINL-FERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISI 232 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999988775 332122 3789999999999875 4999999999999999
Q ss_pred cChhHHHh
Q 000521 811 GSSADLAV 818 (1446)
Q Consensus 811 g~~~~l~~ 818 (1446)
|+++++..
T Consensus 233 g~~~~~~~ 240 (289)
T PRK13645 233 GSPFEIFS 240 (289)
T ss_pred CCHHHHhc
Confidence 99888753
No 450
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.5e-34 Score=320.45 Aligned_cols=193 Identities=26% Similarity=0.380 Sum_probs=157.3
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|++++|+... ...++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~--~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (221)
T TIGR02211 2 LKCENLGKRYQEGK--LDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAK 79 (221)
T ss_pred EEEEeeeEEccCCC--cceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHH
Confidence 57889999985321 112469999999999999999999999999999999999999999998864
Q ss_pred ----eEEEEcCCCCCCC-ccHHHHHhcCC---CCCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHH
Q 000521 669 ----SIAYVPQVPWILS-GTIRDNILFGK---NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 736 (1446)
Q Consensus 669 ----~i~yv~Q~p~l~~-~ti~~nI~~g~---~~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkq 736 (1446)
.++|++|+|.+++ .|++||+.++. .++. ++..+.++.++++.. ......+|||||||
T Consensus 80 ~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~q 148 (221)
T TIGR02211 80 LRNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHR-----------INHRPSELSGGERQ 148 (221)
T ss_pred HHHhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHHHH
Confidence 3899999998885 59999998742 1222 234455555555432 23445689999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhhCCEEEEEeCCEEE
Q 000521 737 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVK 808 (1446)
Q Consensus 737 Ri~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~ 808 (1446)
|++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+..+|++++|++|+++
T Consensus 149 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 149 RVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDL-MLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999988876 332112 378999999999998889999999999975
No 451
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-34 Score=326.21 Aligned_cols=203 Identities=26% Similarity=0.346 Sum_probs=167.2
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEeC-------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------- 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~-----~~~G~i~~~~------- 668 (1446)
.++++|+++.|.. . ++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~---~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~ 77 (251)
T PRK14251 4 IISAKDVHLSYGN---Y---EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSK 77 (251)
T ss_pred eEEEEeeEEEECC---e---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEccccc
Confidence 4789999999852 2 35999999999999999999999999999999999997 4799998765
Q ss_pred --------eEEEEcCCCCCCCccHHHHHhcCCC---C-Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 669 --------SIAYVPQVPWILSGTIRDNILFGKN---Y-DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 669 --------~i~yv~Q~p~l~~~ti~~nI~~g~~---~-~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
.++|++|+|.+++.|++||+.++.. . ++ ++..++++.+++..+.. ...+..+.+|||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 150 (251)
T PRK14251 78 MDLVELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETK-------DNLDRNAQAFSG 150 (251)
T ss_pred chHHHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchH-------HHhccChhhCCH
Confidence 3899999999999999999987532 1 11 23445556555532211 123456789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
|||||++||||++++|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++.+.|
T Consensus 151 Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~ 228 (251)
T PRK14251 151 GQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEET-LME-LKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAG 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHH-HHH-HHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999888776 333 3456899999999999765 9999999999999999
Q ss_pred ChhHHHh
Q 000521 812 SSADLAV 818 (1446)
Q Consensus 812 ~~~~l~~ 818 (1446)
+.+++..
T Consensus 229 ~~~~~~~ 235 (251)
T PRK14251 229 PTEEMFI 235 (251)
T ss_pred CHHHHHh
Confidence 9888753
No 452
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-34 Score=330.87 Aligned_cols=206 Identities=25% Similarity=0.389 Sum_probs=166.5
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|++++|+.... ...++|+|+||++++|++++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~~-~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (280)
T PRK13649 2 GINLQNVSYTYQAGTP-FEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDI 80 (280)
T ss_pred eEEEEEEEEEcCCCCc-cccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCH
Confidence 3678999999864211 112469999999999999999999999999999999999999999998865
Q ss_pred -----eEEEEcCCC--CCCCccHHHHHhcCCC---CChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000521 669 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1446)
Q Consensus 669 -----~i~yv~Q~p--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 734 (1446)
.|+|++|+| .+++.|++|||.++.. .+.+ +.+++++..++..+ .......+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~ 150 (280)
T PRK13649 81 KQIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELSGGQ 150 (280)
T ss_pred HHHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHH
Confidence 289999998 5788899999987532 2222 23344444455321 1245567899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecCh
Q 000521 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 813 (1446)
Q Consensus 735 kqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~ 813 (1446)
|||++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 151 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (280)
T PRK13649 151 MRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTL-FKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKP 229 (280)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999988876 33212347899999999998865 999999999999999998
Q ss_pred hHHHh
Q 000521 814 ADLAV 818 (1446)
Q Consensus 814 ~~l~~ 818 (1446)
+++..
T Consensus 230 ~~~~~ 234 (280)
T PRK13649 230 KDIFQ 234 (280)
T ss_pred HHHhc
Confidence 88754
No 453
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=4.6e-34 Score=336.26 Aligned_cols=203 Identities=26% Similarity=0.373 Sum_probs=168.0
Q ss_pred CceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC----------
Q 000521 599 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 668 (1446)
Q Consensus 599 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~---------- 668 (1446)
...++++|+++.|.. ..+|+|+||+|++|++++++||||||||||+++|+|+++|++|+|.++|
T Consensus 39 ~~~i~i~nl~k~y~~------~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~ 112 (340)
T PRK13536 39 TVAIDLAGVSKSYGD------KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLA 112 (340)
T ss_pred ceeEEEEEEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHH
Confidence 346899999999852 2359999999999999999999999999999999999999999999876
Q ss_pred --eEEEEcCCCCCC-CccHHHHHhc-CCC--CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000521 669 --SIAYVPQVPWIL-SGTIRDNILF-GKN--YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1446)
Q Consensus 669 --~i~yv~Q~p~l~-~~ti~~nI~~-g~~--~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi 738 (1446)
.+|||||++.++ +.|++||+.+ +.. .+. ++.+++++.++|... ...+..+||||||||+
T Consensus 113 ~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~-----------~~~~~~~LS~G~kqrv 181 (340)
T PRK13536 113 RARIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-----------ADARVSDLSGGMKRRL 181 (340)
T ss_pred hccEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hCCChhhCCHHHHHHH
Confidence 499999999986 4599999975 321 121 233344554444321 2334568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHH
Q 000521 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 817 (1446)
Q Consensus 739 ~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~ 817 (1446)
+||||+.++|+++||||||++||+.+.+++.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++.
T Consensus 182 ~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~-l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~ 260 (340)
T PRK13536 182 TLARALINDPQLLILDEPTTGLDPHARHLIWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALI 260 (340)
T ss_pred HHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999998876 33312357899999999999875 9999999999999999999986
Q ss_pred hc
Q 000521 818 VS 819 (1446)
Q Consensus 818 ~~ 819 (1446)
..
T Consensus 261 ~~ 262 (340)
T PRK13536 261 DE 262 (340)
T ss_pred hh
Confidence 54
No 454
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.5e-34 Score=324.40 Aligned_cols=203 Identities=23% Similarity=0.349 Sum_probs=166.6
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCC-----CcEEEEeC-------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT-----HGSIHASG------- 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~-----~G~i~~~~------- 668 (1446)
.++++|+++.|.. +.+|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|
T Consensus 4 ~l~~~~l~~~~~~------~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~ 77 (251)
T PRK14249 4 KIKIRGVNFFYHK------HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPN 77 (251)
T ss_pred eEEEEEEEEEECC------eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccc
Confidence 5789999999852 23599999999999999999999999999999999999987 69997754
Q ss_pred --------eEEEEcCCCCCCCccHHHHHhcCCCC----Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 669 --------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 669 --------~i~yv~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
.++|++|+|.+++.|++||+.++..+ .+ ++.+++++..++...+. +..+..+.+|||
T Consensus 78 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~ 150 (251)
T PRK14249 78 LDVVNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSG 150 (251)
T ss_pred cChHHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCH
Confidence 39999999999989999999876421 11 12233334444432221 234667889999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
|||||++||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||++++|++|++.+.|
T Consensus 151 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~ 228 (251)
T PRK14249 151 GQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEEL-MQE-LKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYG 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeC
Confidence 999999999999999999999999999999999988765 433 3457899999999999876 8999999999999999
Q ss_pred ChhHHHh
Q 000521 812 SSADLAV 818 (1446)
Q Consensus 812 ~~~~l~~ 818 (1446)
+.+++..
T Consensus 229 ~~~~~~~ 235 (251)
T PRK14249 229 RTGEIFS 235 (251)
T ss_pred CHHHHHh
Confidence 9888743
No 455
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=5.2e-34 Score=328.00 Aligned_cols=201 Identities=24% Similarity=0.343 Sum_probs=165.3
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------- 668 (1446)
..++++|+++.|.. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 79 (269)
T PRK11831 6 NLVDMRGVSFTRGN------RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRL 79 (269)
T ss_pred ceEEEeCeEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhH
Confidence 46899999999842 2359999999999999999999999999999999999999999998875
Q ss_pred -----eEEEEcCCCCCCCc-cHHHHHhcCC----CCChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000521 669 -----SIAYVPQVPWILSG-TIRDNILFGK----NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 734 (1446)
Q Consensus 669 -----~i~yv~Q~p~l~~~-ti~~nI~~g~----~~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQ 734 (1446)
.++|++|++.+++. |++||+.++. ..+.+ +..+.++..++... ......+|||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq 148 (269)
T PRK11831 80 YTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGA-----------AKLMPSELSGGM 148 (269)
T ss_pred HHHhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHH
Confidence 38999999999876 9999998642 12221 23344555554322 233456899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhh-CCEEEEEeCCEEEEecC
Q 000521 735 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 812 (1446)
Q Consensus 735 kqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 812 (1446)
|||++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 149 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~ 227 (269)
T PRK11831 149 ARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKL-ISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGS 227 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999988775 332112 37899999999998875 99999999999999999
Q ss_pred hhHHHh
Q 000521 813 SADLAV 818 (1446)
Q Consensus 813 ~~~l~~ 818 (1446)
++++..
T Consensus 228 ~~~~~~ 233 (269)
T PRK11831 228 AQALQA 233 (269)
T ss_pred HHHHhc
Confidence 988754
No 456
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=326.50 Aligned_cols=204 Identities=25% Similarity=0.344 Sum_probs=167.7
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEeC------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~-----~~G~i~~~~------ 668 (1446)
..++++|+++.|.. +++|+|+||+|++||+++|+|+||||||||+++|.|..+| ++|+|.++|
T Consensus 11 ~~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~ 84 (258)
T PRK14268 11 PQIKVENLNLWYGE------KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEP 84 (258)
T ss_pred eeEEEeeeEEEeCC------eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccc
Confidence 46889999998852 2359999999999999999999999999999999999875 799998754
Q ss_pred ---------eEEEEcCCCCCCCccHHHHHhcCCC---CChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 669 ---------SIAYVPQVPWILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 669 ---------~i~yv~Q~p~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
.++|++|++.+++.|++||+.++.. .+.+ +.+++++.+++..++. ........+|||
T Consensus 85 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 157 (258)
T PRK14268 85 DVDVVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS-------DRLKSPALSLSG 157 (258)
T ss_pred cchHHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCChhhCCH
Confidence 3899999999998999999987531 2222 2344555555532221 223556779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 158 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~ 235 (258)
T PRK14268 158 GQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDL-IMN-LKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFG 235 (258)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHH-HHH-HhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999988875 333 3457899999999999865 9999999999999999
Q ss_pred ChhHHHh
Q 000521 812 SSADLAV 818 (1446)
Q Consensus 812 ~~~~l~~ 818 (1446)
+++++..
T Consensus 236 ~~~~~~~ 242 (258)
T PRK14268 236 QTRQIFH 242 (258)
T ss_pred CHHHHhc
Confidence 9988753
No 457
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-34 Score=363.59 Aligned_cols=217 Identities=24% Similarity=0.336 Sum_probs=175.0
Q ss_pred cEEEEEEEEEecCC--CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCC----------
Q 000521 1218 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII---------- 1285 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~---------- 1285 (1446)
.|+++|++++|+.. ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 69999999999632 236999999999999999999999999999999999999999999999998652
Q ss_pred CCChH---hHh-cceEEEeCCC--CCCC-CcHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCc---hhhhcCC
Q 000521 1286 NTPVR---DLR-GRFAVVPQSP--FLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESG 1351 (1446)
Q Consensus 1286 ~i~~~---~lR-~~i~~VpQdp--~lF~-gTIR~NLdp~~----~~~d~ei~~aL~~~~L~~~i~~lgLd---t~v~e~G 1351 (1446)
+.+.. .+| ++|++|+|+| .+++ -|+++|+.... ..+..+..+ .+.+.++.+|++ .......
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~~ 166 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMV-----EAKRMLDQVRIPEAQTILSRYP 166 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHCCCCChhhHHhCCC
Confidence 22322 344 5799999999 5776 49999986421 112211111 112333344553 2355666
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-C-CcEEEEeccCchhHhh-cCEEEEEeCCE
Q 000521 1352 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-K-GMTVITIAHRISTVLN-MDEILILDHGH 1428 (1446)
Q Consensus 1352 ~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~-~~TvI~IaHrl~ti~~-~DrIlvl~~G~ 1428 (1446)
.+||||||||++|||||+.+|++|||||||++||..+.+.+.+.|++.. + ++|||+|||+++.+.. ||||++|++|+
T Consensus 167 ~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~ 246 (623)
T PRK10261 167 HQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGE 246 (623)
T ss_pred ccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCe
Confidence 7899999999999999999999999999999999999999999998864 2 7899999999999865 89999999999
Q ss_pred EEEEeccchhh
Q 000521 1429 LVCISFICRYF 1439 (1446)
Q Consensus 1429 vvE~~~~~~~~ 1439 (1446)
+++.|.+..++
T Consensus 247 i~~~g~~~~~~ 257 (623)
T PRK10261 247 AVETGSVEQIF 257 (623)
T ss_pred ecccCCHHHhh
Confidence 99998877654
No 458
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-34 Score=324.79 Aligned_cols=203 Identities=24% Similarity=0.310 Sum_probs=169.3
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEeC-------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~-----~~G~i~~~~------- 668 (1446)
-++++|+++.|.. +.+|+|+||++++||+++|+|+||||||||+++|+|..+| ++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~ 77 (251)
T PRK14270 4 KMESKNLNLWYGE------KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKD 77 (251)
T ss_pred EEEEEEeEEEECC------eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEeccccc
Confidence 4788999999852 2359999999999999999999999999999999999875 799998865
Q ss_pred --------eEEEEcCCCCCCCccHHHHHhcCCCC----Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 669 --------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 669 --------~i~yv~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
.++|++|++.+++.|++||+.++... +. ++..++++.+++..++.. ..+.....|||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~ 150 (251)
T PRK14270 78 VDVVELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSG 150 (251)
T ss_pred ccHHHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCH
Confidence 38999999999999999999875321 11 234566777766543321 23456779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
|||||++||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 151 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-L~~-~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (251)
T PRK14270 151 GQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDL-MVE-LKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFN 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeC
Confidence 999999999999999999999999999999999988775 433 3446899999999998775 9999999999999999
Q ss_pred ChhHHHh
Q 000521 812 SSADLAV 818 (1446)
Q Consensus 812 ~~~~l~~ 818 (1446)
+.+++..
T Consensus 229 ~~~~~~~ 235 (251)
T PRK14270 229 KTEKIFL 235 (251)
T ss_pred CHHHHhc
Confidence 9888753
No 459
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-34 Score=324.94 Aligned_cols=203 Identities=28% Similarity=0.355 Sum_probs=166.0
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCc--cC---CCcEEEEeC-------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM--ML---THGSIHASG------- 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~--~~---~~G~i~~~~------- 668 (1446)
.++++|+++.|.. +++|+|+||++++||+++|+||||||||||+++|.|.. +| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~------~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~ 78 (252)
T PRK14239 5 ILQVSDLSVYYNK------KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPR 78 (252)
T ss_pred eEEEEeeEEEECC------eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcc
Confidence 4789999999852 23599999999999999999999999999999999985 36 589998765
Q ss_pred --------eEEEEcCCCCCCCccHHHHHhcCCC---C-Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 669 --------SIAYVPQVPWILSGTIRDNILFGKN---Y-DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 669 --------~i~yv~Q~p~l~~~ti~~nI~~g~~---~-~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
.++|++|+|.+++.|++||+.++.. . ++ ++..++++.+++...+. +..+....+|||
T Consensus 79 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 151 (252)
T PRK14239 79 TDTVDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSG 151 (252)
T ss_pred cchHhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCH
Confidence 3899999999999999999986521 1 11 22333455555543222 234567789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-hCCEEEEEeCCEEEEec
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g 811 (1446)
|||||++||||+..+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 152 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 229 (252)
T PRK14239 152 GQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEET-LLG-LKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYN 229 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHH-HHH-HhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999988875 333 344689999999999876 49999999999999999
Q ss_pred ChhHHHh
Q 000521 812 SSADLAV 818 (1446)
Q Consensus 812 ~~~~l~~ 818 (1446)
+.+++..
T Consensus 230 ~~~~~~~ 236 (252)
T PRK14239 230 DTKQMFM 236 (252)
T ss_pred CHHHHHh
Confidence 9888753
No 460
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-34 Score=312.22 Aligned_cols=213 Identities=25% Similarity=0.318 Sum_probs=180.3
Q ss_pred cEEEEEEEEEecCCC----------------------CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCc
Q 000521 1218 LIEFQNVTMRYKPSL----------------------PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1275 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~----------------------~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G 1275 (1446)
.|+++||+.-+..+. ..-++|+||+|+.||..-|.|=||||||||+.++.|++||++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 588888888775431 1237899999999999999999999999999999999999999
Q ss_pred eEEEcCeeCCCCChHhHh----cceEEEeCCCCCCCC-cHHHhcCCCCCC---C----hHHHHHHHHHccHHHHHHhCCC
Q 000521 1276 QILVDGLNIINTPVRDLR----GRFAVVPQSPFLFEG-SLRDNLDPFHMN---D----DLKIWSVLEKCHVKEEVEAVGL 1343 (1446)
Q Consensus 1276 ~I~IDG~di~~i~~~~lR----~~i~~VpQdp~lF~g-TIR~NLdp~~~~---~----d~ei~~aL~~~~L~~~i~~lgL 1343 (1446)
+|++||.||..++.++|| +++++|.|.--||+- ||-+|..++-+. + .+...++|+.+||.++
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~------ 157 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGY------ 157 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhh------
Confidence 999999999999988875 579999999999986 999999876432 2 2234455666665543
Q ss_pred chhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHh-hcCE
Q 000521 1344 ETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDE 1420 (1446)
Q Consensus 1344 dt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~Dr 1420 (1446)
-......||||+|||+.|||||..+|+||++|||.|+||+--...+|+-+.+.- -++|+++|||+|+... --||
T Consensus 158 ---~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~r 234 (386)
T COG4175 158 ---ADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDR 234 (386)
T ss_pred ---hhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccce
Confidence 334456799999999999999999999999999999999999999998876543 3799999999999764 5799
Q ss_pred EEEEeCCEEEEEeccchhh
Q 000521 1421 ILILDHGHLVCISFICRYF 1439 (1446)
Q Consensus 1421 Ilvl~~G~vvE~~~~~~~~ 1439 (1446)
|..|++|+|+..|+|+...
T Consensus 235 IaimkdG~ivQ~Gtp~eIl 253 (386)
T COG4175 235 IAIMKDGEIVQVGTPEEIL 253 (386)
T ss_pred EEEecCCeEEEeCCHHHHH
Confidence 9999999999999998654
No 461
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.9e-34 Score=322.63 Aligned_cols=199 Identities=26% Similarity=0.353 Sum_probs=164.1
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|+++.|+. +++++|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~------~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 75 (240)
T PRK09493 2 IEFKNVSKHFGP------TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLI 75 (240)
T ss_pred EEEEeEEEEECC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHH
Confidence 568899998852 2359999999999999999999999999999999999999999998875
Q ss_pred --eEEEEcCCCCCCC-ccHHHHHhcCC----CCCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 --SIAYVPQVPWILS-GTIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 --~i~yv~Q~p~l~~-~ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
.++|++|++.++. .|++||+.++. ..+. ++..++++..+++. ........||||||||
T Consensus 76 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS~G~~qr 144 (240)
T PRK09493 76 RQEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAE-----------RAHHYPSELSGGQQQR 144 (240)
T ss_pred hhceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChH-----------HHhcChhhcCHHHHHH
Confidence 3899999998875 59999998753 1222 23344455444432 2344557899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHH
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 816 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 816 (1446)
++||||++.+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 145 v~la~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 223 (240)
T PRK09493 145 VAIARALAVKPKLMLFDEPTSALDPELRHEVLKV-MQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVL 223 (240)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHH
Confidence 9999999999999999999999999999988875 33212347899999999999875 999999999999999998876
Q ss_pred Hh
Q 000521 817 AV 818 (1446)
Q Consensus 817 ~~ 818 (1446)
..
T Consensus 224 ~~ 225 (240)
T PRK09493 224 IK 225 (240)
T ss_pred hc
Confidence 43
No 462
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=3.1e-34 Score=315.04 Aligned_cols=192 Identities=20% Similarity=0.273 Sum_probs=160.1
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceEE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1298 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1298 (1446)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (198)
T TIGR01189 1 LAARNLACSRGE--RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQR-DEPHRNILY 77 (198)
T ss_pred CEEEEEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccch-HHhhhheEE
Confidence 578999999964 36999999999999999999999999999999999999999999999999998765 456789999
Q ss_pred EeCCCCCCC-CcHHHhcCCCCC-C--ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000521 1299 VPQSPFLFE-GSLRDNLDPFHM-N--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1374 (1446)
Q Consensus 1299 VpQdp~lF~-gTIR~NLdp~~~-~--~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1374 (1446)
+||++.+|+ .|+++|+..... . .++++.++++..++.+ .......+||+|||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~---------~~~~~~~~LS~G~~qrv~la~al~~~p~l 148 (198)
T TIGR01189 78 LGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGLTG---------FEDLPAAQLSAGQQRRLALARLWLSRAPL 148 (198)
T ss_pred eccCcccccCCcHHHHHHHHHHHcCCcHHHHHHHHHHcCCHH---------HhcCChhhcCHHHHHHHHHHHHHhcCCCE
Confidence 999998887 699999864321 1 1234555566555543 33344457999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHh-cCCcEEEEeccCchhHhhcCEEEE
Q 000521 1375 LCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEILI 1423 (1446)
Q Consensus 1375 LlLDEaTS~lD~~Te~~Iq~~I~~~-~~~~TvI~IaHrl~ti~~~DrIlv 1423 (1446)
++|||||++||..+.+.+.+.|++. .++.|+|++||+...+. ||+++.
T Consensus 149 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~-~~~~~~ 197 (198)
T TIGR01189 149 WILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGLV-EARELR 197 (198)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccccc-ceEEee
Confidence 9999999999999999999999875 35789999999985543 476654
No 463
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-34 Score=317.33 Aligned_cols=191 Identities=23% Similarity=0.390 Sum_probs=157.6
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC---------eEEEE
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------SIAYV 673 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~---------~i~yv 673 (1446)
+++|+++.|+. +++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++|+
T Consensus 2 ~~~~l~~~~~~------~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~ 75 (210)
T cd03269 2 EVENVTKRFGR------VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYL 75 (210)
T ss_pred EEEEEEEEECC------EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEe
Confidence 57888888842 2359999999999999999999999999999999999999999999986 49999
Q ss_pred cCCCCCCCc-cHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHc
Q 000521 674 PQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 745 (1446)
Q Consensus 674 ~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly 745 (1446)
+|++.++.. |++||+.++.. .+ +++..+.++..+++.. ......+||||||||++||||++
T Consensus 76 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~la~al~ 144 (210)
T cd03269 76 PEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEY-----------ANKRVEELSKGNQQKVQFIAAVI 144 (210)
T ss_pred ccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHH-----------HhCcHhhCCHHHHHHHHHHHHHh
Confidence 999988875 99999976421 11 2234455555555432 23456789999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 746 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 746 ~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++.+.|
T Consensus 145 ~~p~~lllDEP~~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 145 HDPELLILDEPFSGLDPVNVELLKDV-IRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999988876 33212347899999999998865 9999999999998653
No 464
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-34 Score=340.42 Aligned_cols=188 Identities=25% Similarity=0.389 Sum_probs=158.1
Q ss_pred ccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------------eEEEEcCCCCCCC-c
Q 000521 621 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILS-G 682 (1446)
Q Consensus 621 ~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------------~i~yv~Q~p~l~~-~ 682 (1446)
.+|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++| +++||+|++.++. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 359999999999999999999999999999999999999999998865 4899999999886 4
Q ss_pred cHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcC
Q 000521 683 TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDD 755 (1446)
Q Consensus 683 ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDe 755 (1446)
|++|||.++.. ++. ++..++++.++|+... .....+||||||||++||||++.+|+++||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~-----------~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYA-----------HSYPDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhh-----------hcCcccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999987632 222 3445566666665433 33446899999999999999999999999999
Q ss_pred CcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-hCCEEEEEeCCEEEEecChhHHHhc
Q 000521 756 VLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 819 (1446)
Q Consensus 756 p~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1446)
||++||+.+.+.+.+.+..-....++|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999998887632211124789999999999875 4999999999999999999988653
No 465
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.2e-34 Score=339.61 Aligned_cols=188 Identities=26% Similarity=0.397 Sum_probs=158.5
Q ss_pred ccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC---------------------eEEEEcCCCCC
Q 000521 621 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------------------SIAYVPQVPWI 679 (1446)
Q Consensus 621 ~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~---------------------~i~yv~Q~p~l 679 (1446)
.+++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++| .++||+|++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 359999999999999999999999999999999999999999999875 39999999999
Q ss_pred CC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEE
Q 000521 680 LS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIY 751 (1446)
Q Consensus 680 ~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~il 751 (1446)
++ .|++||+.++.. .++ ++..++++..+|+... .....+|||||||||+|||||+.+|+|+
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~-----------~~~~~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWA-----------DKKPGELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 97 699999998642 222 2445566666665432 3344589999999999999999999999
Q ss_pred EEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchh-hhCCEEEEEeCCEEEEecChhHHHhc
Q 000521 752 MLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI-SAADMVVVMDKGQVKWIGSSADLAVS 819 (1446)
Q Consensus 752 lLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l-~~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1446)
|||||||+||+.+.+.+.+.+..-....++|+|++||+++.+ ..||+|++|++|++++.|+++++...
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 999999999999999988864321112378999999999986 45999999999999999999998643
No 466
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=5e-34 Score=359.20 Aligned_cols=217 Identities=23% Similarity=0.386 Sum_probs=174.8
Q ss_pred cEEEEEEEEEecCC--CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCceEEEcCeeCCCCChH
Q 000521 1218 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTPVR 1290 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i~~~ 1290 (1446)
.++++|++++|+.. ..++|+|+||+|++||.+||+||||||||||+++|.|+++| ++|+|.+||.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999632 24699999999999999999999999999999999999986 799999999999877654
Q ss_pred h---Hh-cceEEEeCCCC--CCC-CcHHHhcCCC----CCCChHHHHHHHHHccHHHHHHhCCCch---hhhcCCCCCCh
Q 000521 1291 D---LR-GRFAVVPQSPF--LFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLET---FVKESGISFSV 1356 (1446)
Q Consensus 1291 ~---lR-~~i~~VpQdp~--lF~-gTIR~NLdp~----~~~~d~ei~~aL~~~~L~~~i~~lgLdt---~v~e~G~~LSg 1356 (1446)
+ .| ++++||||+|. +++ -|+++|+... ...+.++..+ .+.+.++.+|++. .......+|||
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~~~~LSg 159 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARG-----EILNCLDRVGIRQAAKRLTDYPHQLSG 159 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHCCCCChHHHHhhCCcccCH
Confidence 3 34 57999999985 444 4899987521 1112211111 1223333345532 23455668999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEe
Q 000521 1357 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLVCIS 1433 (1446)
Q Consensus 1357 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~ 1433 (1446)
|||||++|||||+.+|++||||||||+||+++.+.+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|
T Consensus 160 Ge~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g 239 (529)
T PRK15134 160 GERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVEQN 239 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999998753 37899999999999875 8999999999999999
Q ss_pred ccchhh
Q 000521 1434 FICRYF 1439 (1446)
Q Consensus 1434 ~~~~~~ 1439 (1446)
.+..++
T Consensus 240 ~~~~~~ 245 (529)
T PRK15134 240 RAATLF 245 (529)
T ss_pred CHHHHh
Confidence 887653
No 467
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=4.7e-34 Score=320.04 Aligned_cols=201 Identities=22% Similarity=0.319 Sum_probs=162.1
Q ss_pred EEEEEEEEEecCC-----CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEc--C--eeCCCCCh
Q 000521 1219 IEFQNVTMRYKPS-----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD--G--LNIINTPV 1289 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~-----~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ID--G--~di~~i~~ 1289 (1446)
|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+| | +++...+.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 7899999999631 2469999999999999999999999999999999999999999999998 4 37766665
Q ss_pred Hh---H-hcceEEEeCCCCCCCC-cHHHhcCCC---CCCChHHHHHHHHHccHHHHHHhCCCchh-hhcCCCCCChhHHH
Q 000521 1290 RD---L-RGRFAVVPQSPFLFEG-SLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQ 1360 (1446)
Q Consensus 1290 ~~---l-R~~i~~VpQdp~lF~g-TIR~NLdp~---~~~~d~ei~~aL~~~~L~~~i~~lgLdt~-v~e~G~~LSgGQrQ 1360 (1446)
.. + +++++|+||+|.+|+. |+++|+... .....++..+ ...+.++.+|++.. ......+||+||||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~LS~G~~q 156 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARA-----RARELLARLNIPERLWHLPPATFSGGEQQ 156 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhhhCCcccCCHHHHH
Confidence 43 3 4679999999998875 999998642 1111111111 12333444466543 24456789999999
Q ss_pred HHHHHHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHh-hcCEEEEE
Q 000521 1361 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILIL 1424 (1446)
Q Consensus 1361 rl~LARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrIlvl 1424 (1446)
|++||||++++|++|+|||||++||.++.+.+.+.|++.. +++|+|+|||+++.+. .||+|+.+
T Consensus 157 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 157 RVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 9999999999999999999999999999999999998764 4789999999999886 59999876
No 468
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-34 Score=325.89 Aligned_cols=202 Identities=26% Similarity=0.347 Sum_probs=167.0
Q ss_pred CCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC---------
Q 000521 598 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------- 668 (1446)
Q Consensus 598 ~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~--------- 668 (1446)
++..++++|+++.|+. +.+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 8 ~~~~l~i~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~ 81 (265)
T PRK10575 8 SDTTFALRNVSFRVPG------RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSK 81 (265)
T ss_pred CCceEEEeeEEEEECC------EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHH
Confidence 3456899999999852 2359999999999999999999999999999999999999999999876
Q ss_pred ----eEEEEcCCCCCCCc-cHHHHHhcCCC--------C---ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 669 ----SIAYVPQVPWILSG-TIRDNILFGKN--------Y---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 669 ----~i~yv~Q~p~l~~~-ti~~nI~~g~~--------~---~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
.++|++|++.++.. |++||+.++.. . ++++..+.++.++++..+. ....+|||
T Consensus 82 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSg 150 (265)
T PRK10575 82 AFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAH-----------RLVDSLSG 150 (265)
T ss_pred HHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhc-----------CCcccCCH
Confidence 38999999876654 99999987531 1 1234556666666654332 33458999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-hCCEEEEEeCCEEEEe
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWI 810 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~ 810 (1446)
|||||++||||+..+|+++||||||++||+.+.+.+.+. +..... .+.|+|++||+++.+. .||+|++|++|++++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~-l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~ 229 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLAL-VHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQ 229 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEe
Confidence 999999999999999999999999999999999888775 332112 3789999999999986 4999999999999999
Q ss_pred cChhHHH
Q 000521 811 GSSADLA 817 (1446)
Q Consensus 811 g~~~~l~ 817 (1446)
|+.+++.
T Consensus 230 ~~~~~~~ 236 (265)
T PRK10575 230 GTPAELM 236 (265)
T ss_pred cCHHHhc
Confidence 9988764
No 469
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.7e-34 Score=319.16 Aligned_cols=198 Identities=23% Similarity=0.336 Sum_probs=162.1
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------- 668 (1446)
..++++|+++.|.. .++++|+||++++||+++|+||||||||||+++|.|+++|++|+|.++|
T Consensus 6 ~~i~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~ 79 (225)
T PRK10247 6 PLLQLQNVGYLAGD------AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIY 79 (225)
T ss_pred ceEEEeccEEeeCC------ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHH
Confidence 46889999999852 2359999999999999999999999999999999999999999998876
Q ss_pred --eEEEEcCCCCCCCccHHHHHhcCCC-----CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000521 669 --SIAYVPQVPWILSGTIRDNILFGKN-----YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 741 (1446)
Q Consensus 669 --~i~yv~Q~p~l~~~ti~~nI~~g~~-----~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lA 741 (1446)
.++|++|+|++++.|++||+.++.. .++++..+.++.+++.. +.......+||||||||++||
T Consensus 80 ~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~la 149 (225)
T PRK10247 80 RQQVSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISLI 149 (225)
T ss_pred HhccEEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHHH
Confidence 3899999999998999999986421 12233445555555532 223556779999999999999
Q ss_pred HHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhhCCEEEEEe-CCEEEEecChh
Q 000521 742 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMD-KGQVKWIGSSA 814 (1446)
Q Consensus 742 Raly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~ad~i~~l~-~G~i~~~g~~~ 814 (1446)
||++++|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+.+.++.||++++|+ ++..+++|+|+
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 150 RNLQFMPKVLLLDEITSALDESNKHNVNEI-IHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 999999999999999999999998887765 33211 23789999999999998899999995 56666677664
No 470
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.1e-34 Score=322.50 Aligned_cols=197 Identities=21% Similarity=0.313 Sum_probs=164.4
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|+++.|+. .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 3 i~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (242)
T TIGR03411 3 LYLEGLSVSFDG------FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIAR 76 (242)
T ss_pred EEEEeeEEEcCC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHh
Confidence 678999998852 2359999999999999999999999999999999999999999999875
Q ss_pred -eEEEEcCCCCCCCc-cHHHHHhcCCCCC---------------hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000521 669 -SIAYVPQVPWILSG-TIRDNILFGKNYD---------------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 731 (1446)
Q Consensus 669 -~i~yv~Q~p~l~~~-ti~~nI~~g~~~~---------------~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LS 731 (1446)
.++|++|++.++++ |++||+.++...+ +++.++.++..+++ ........+||
T Consensus 77 ~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS 145 (242)
T TIGR03411 77 AGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLA-----------DEADRLAGLLS 145 (242)
T ss_pred cCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCc-----------hhhcCChhhCC
Confidence 38999999999886 9999998753211 12233334433332 23455667899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEe
Q 000521 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 810 (1446)
Q Consensus 732 GGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 810 (1446)
||||||++||||++.+|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 146 ~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~ 223 (242)
T TIGR03411 146 HGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAEL-LKS-LAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAE 223 (242)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHH-HHH-HhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEee
Confidence 9999999999999999999999999999999999988875 332 3446899999999999875 999999999999999
Q ss_pred cChhHHH
Q 000521 811 GSSADLA 817 (1446)
Q Consensus 811 g~~~~l~ 817 (1446)
|+++++.
T Consensus 224 ~~~~~~~ 230 (242)
T TIGR03411 224 GSLDQVQ 230 (242)
T ss_pred CCHHHHh
Confidence 9988764
No 471
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-34 Score=323.14 Aligned_cols=202 Identities=26% Similarity=0.353 Sum_probs=166.7
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEeC-------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~-----~~G~i~~~~------- 668 (1446)
.++++|+++.|.. . ++++|+||+|++||+++|+||||||||||+++|.|..++ ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~ 76 (250)
T PRK14240 3 KISVKDLDLFYGD---F---QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSD 76 (250)
T ss_pred eEEEEEEEEEECC---c---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 4789999999852 2 359999999999999999999999999999999998763 689998865
Q ss_pred --------eEEEEcCCCCCCCccHHHHHhcCCCC----C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 669 --------SIAYVPQVPWILSGTIRDNILFGKNY----D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 669 --------~i~yv~Q~p~l~~~ti~~nI~~g~~~----~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
.++|++|+|.+++.|++||+.++... + +++..++++.+++..++. ...+..+.+|||
T Consensus 77 ~~~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~ 149 (250)
T PRK14240 77 IDVNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSG 149 (250)
T ss_pred cchHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCH
Confidence 38999999999889999999876321 1 123344555555543332 234567789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
|||||++||||++.+|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 150 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (250)
T PRK14240 150 GQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEEL-IQE-LKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFG 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999988765 433 3457899999999998765 9999999999999999
Q ss_pred ChhHHH
Q 000521 812 SSADLA 817 (1446)
Q Consensus 812 ~~~~l~ 817 (1446)
+.+++.
T Consensus 228 ~~~~~~ 233 (250)
T PRK14240 228 DTVDLF 233 (250)
T ss_pred CHHHHH
Confidence 988874
No 472
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=5.6e-34 Score=356.01 Aligned_cols=209 Identities=18% Similarity=0.208 Sum_probs=176.4
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcceE
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1297 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1297 (1446)
.|+++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...+|++++
T Consensus 3 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 3 SLQISQGTFRLSD--TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred eEEEEeEEEEcCC--eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 3899999999964 35999999999999999999999999999999999999999999999999988777777888899
Q ss_pred EEeCCCCC--C-------CCcHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000521 1298 VVPQSPFL--F-------EGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1368 (1446)
Q Consensus 1298 ~VpQdp~l--F-------~gTIR~NLdp~~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1368 (1446)
++||+|.+ + .-|+++|+.... ..++++.++++.. |++.........||||||||++|||||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~---------~l~~~~~~~~~~LSgG~~qrv~la~al 150 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDEV-KDPARCEQLAQQF---------GITALLDRRFKYLSTGETRKTLLCQAL 150 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccch-hHHHHHHHHHHHc---------CCHhhhhCCcccCCHHHHHHHHHHHHH
Confidence 99999753 2 348899875421 1223444455544 444434445567999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1369 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1369 Lr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
+++|++|+|||||++||+++.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|++++.|.+...
T Consensus 151 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 222 (490)
T PRK10938 151 MSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEI 222 (490)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999998763 37899999999999876 899999999999998877643
No 473
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=3.2e-33 Score=372.62 Aligned_cols=209 Identities=23% Similarity=0.266 Sum_probs=151.1
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHH---------HHhcCCCCCC----c----eEEEc
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILN---------ALFRLTPICG----G----QILVD 1280 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~---------~L~rl~~~~~----G----~I~ID 1280 (1446)
.++++|++. ..|+|+|++|++||.+||.|+||||||||++ .|.|...+.. + -|.||
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 578888762 3799999999999999999999999999999 4445332211 1 24666
Q ss_pred CeeCCCCCh----H------hHh---------cce-----EEEeCC------------------C---------------
Q 000521 1281 GLNIINTPV----R------DLR---------GRF-----AVVPQS------------------P--------------- 1303 (1446)
Q Consensus 1281 G~di~~i~~----~------~lR---------~~i-----~~VpQd------------------p--------------- 1303 (1446)
-.+|..-+. . ++| ++. .+..|. |
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 655543222 1 444 111 112221 0
Q ss_pred -----CCCCC-cHHHhcCCCCC-----C-ChHHHHHHHHHccHHHHHHhCCCchh-hhcCCCCCChhHHHHHHHHHHhc-
Q 000521 1304 -----FLFEG-SLRDNLDPFHM-----N-DDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLICLARALL- 1369 (1446)
Q Consensus 1304 -----~lF~g-TIR~NLdp~~~-----~-~d~ei~~aL~~~~L~~~i~~lgLdt~-v~e~G~~LSgGQrQrl~LARALL- 1369 (1446)
+.+.+ ||.|||++... . +.+++.+.+ +.++.+||+.. .+....+||||||||++|||||+
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l------~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~ 826 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKI------HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLA 826 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHH------HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhh
Confidence 13333 77777765321 0 112222222 13344588765 67788899999999999999998
Q ss_pred --cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhhcCEEEEEe------CCEEEEEeccchhh
Q 000521 1370 --KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILD------HGHLVCISFICRYF 1439 (1446)
Q Consensus 1370 --r~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlvl~------~G~vvE~~~~~~~~ 1439 (1446)
++|++|||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++|+ +|++++.|+|..+.
T Consensus 827 ~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtpeel~ 905 (1809)
T PRK00635 827 PSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSPEELI 905 (1809)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCHHHHH
Confidence 5999999999999999999999999998764 4889999999999998899999996 79999999998764
No 474
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-34 Score=301.67 Aligned_cols=205 Identities=26% Similarity=0.397 Sum_probs=168.9
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|++..|.. ..+|++|||++++||+++++|+||+||||||++|.|..++.+|+|.++|
T Consensus 4 L~v~~l~~~YG~------~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r 77 (237)
T COG0410 4 LEVENLSAGYGK------IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERAR 77 (237)
T ss_pred eeEEeEeecccc------eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHh
Confidence 567888887753 2359999999999999999999999999999999999999999999987
Q ss_pred -eEEEEcCCCCCCCc-cHHHHHhcCCCCChh-hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHc
Q 000521 669 -SIAYVPQVPWILSG-TIRDNILFGKNYDPQ-SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 745 (1446)
Q Consensus 669 -~i~yv~Q~p~l~~~-ti~~nI~~g~~~~~~-~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly 745 (1446)
.|+||||.-.+|.. ||+||+..|....+. ...+. .++.-.+.+|. .......++.+|||||||-+||||||.
T Consensus 78 ~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~----~~e~v~~lFP~-Lker~~~~aG~LSGGEQQMLAiaRALm 152 (237)
T COG0410 78 LGIAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQER----DLEEVYELFPR-LKERRNQRAGTLSGGEQQMLAIARALM 152 (237)
T ss_pred CCeEeCcccccchhhCcHHHHHhhhhhcccccccccc----cHHHHHHHChh-HHHHhcCcccCCChHHHHHHHHHHHHh
Confidence 49999999999976 999999987433221 11110 02233444553 234467889999999999999999999
Q ss_pred cCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-C-CceEEEEccCcch-hhhCCEEEEEeCCEEEEecChhHHHhc
Q 000521 746 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-L-QKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAVS 819 (1446)
Q Consensus 746 ~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~-~~t~ilvth~~~~-l~~ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1446)
++|++|+||||+.+|-|...+.|++. +.. +. + +.||++|.++... ++.||+.|+|++|+|+..|+.+|+..+
T Consensus 153 ~~PklLLLDEPs~GLaP~iv~~I~~~-i~~-l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 153 SRPKLLLLDEPSEGLAPKIVEEIFEA-IKE-LRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred cCCCEEEecCCccCcCHHHHHHHHHH-HHH-HHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 99999999999999999999999987 333 33 2 5699999999987 556999999999999999999998653
No 475
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=4.6e-34 Score=363.12 Aligned_cols=201 Identities=25% Similarity=0.340 Sum_probs=168.5
Q ss_pred CcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC--CceEEEcCeeCCCCChHhHhcceEEEeCCCCCCCC-c
Q 000521 1233 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC--GGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEG-S 1309 (1446)
Q Consensus 1233 ~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~--~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~g-T 1309 (1446)
..+|+|+|+++++||++||+||||||||||+++|.|+.+|. +|+|.+||.++. ...+++++||||++.+|+. |
T Consensus 81 ~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~~----~~~~~~i~yv~Q~~~l~~~lT 156 (659)
T PLN03211 81 RTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKPT----KQILKRTGFVTQDDILYPHLT 156 (659)
T ss_pred CeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEECc----hhhccceEEECcccccCCcCC
Confidence 46999999999999999999999999999999999999885 899999999874 2456789999999999975 9
Q ss_pred HHHhcCCCC------CCChHHHHHHHHHccHHHHHHhCCC----chhhhcC-CCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000521 1310 LRDNLDPFH------MNDDLKIWSVLEKCHVKEEVEAVGL----ETFVKES-GISFSVGQRQLICLARALLKSSKVLCLD 1378 (1446)
Q Consensus 1310 IR~NLdp~~------~~~d~ei~~aL~~~~L~~~i~~lgL----dt~v~e~-G~~LSgGQrQrl~LARALLr~~~ILlLD 1378 (1446)
+|||+.+.. ..++++..+. ..+.++.+|| ||.+|+. ...||||||||++|||||+++|+||+||
T Consensus 157 V~E~l~~~a~~~~~~~~~~~~~~~~-----v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLD 231 (659)
T PLN03211 157 VRETLVFCSLLRLPKSLTKQEKILV-----AESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILD 231 (659)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHH-----HHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEe
Confidence 999996421 1233332211 2234444444 6777653 5679999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchh-H-hhcCEEEEEeCCEEEEEeccchhhhhh
Q 000521 1379 ECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST-V-LNMDEILILDHGHLVCISFICRYFIFL 1442 (1446)
Q Consensus 1379 EaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~t-i-~~~DrIlvl~~G~vvE~~~~~~~~~~~ 1442 (1446)
|||++||..+...+.+.|++.. +++|||+++|+++. + ..||+|++|++|++++.|.+.....|+
T Consensus 232 EPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f 298 (659)
T PLN03211 232 EPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYF 298 (659)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHH
Confidence 9999999999999999998764 58999999999984 4 568999999999999999998887774
No 476
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.3e-34 Score=284.88 Aligned_cols=209 Identities=26% Similarity=0.344 Sum_probs=174.9
Q ss_pred cEEEEEEEEEecCC--CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChH---hH
Q 000521 1218 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DL 1292 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~l 1292 (1446)
.|+.++++..-+.. .-.+|++|+|.|++||.+||||+||||||||+..|.|+-+|++|+|.+.|.++.+++-+ .+
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 57888887776543 33689999999999999999999999999999999999999999999999999988855 45
Q ss_pred h-cceEEEeCCCCCCCC-cHHHhcC-CC---CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000521 1293 R-GRFAVVPQSPFLFEG-SLRDNLD-PF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1366 (1446)
Q Consensus 1293 R-~~i~~VpQdp~lF~g-TIR~NLd-p~---~~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1366 (1446)
| +++++|.|.-.|.+. |--||.. |. ++...+. +....+.++..||...+.--..+|||||+||++|||
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~------~~~A~~lL~~vGLg~Rl~HyP~qLSGGEQQRVAiAR 159 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADS------RAGAKALLEAVGLGKRLTHYPAQLSGGEQQRVALAR 159 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccH------HHHHHHHHHHhCcccccccCccccCchHHHHHHHHH
Confidence 5 579999999988764 8899974 32 2211111 111223344457777788778899999999999999
Q ss_pred HhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCchhHhhcCEEEEEeCCEEEEE
Q 000521 1367 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLVCI 1432 (1446)
Q Consensus 1367 ALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~ 1432 (1446)
|+.-+|+||+-||||-|||.+|.+.|-+.+-+.- .+.|.++|||+......|||++-|.+|+++|.
T Consensus 160 Afa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~G~l~~~ 227 (228)
T COG4181 160 AFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAARCDRQLRLRSGRLVED 227 (228)
T ss_pred HhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHhhhheeeeecceeccC
Confidence 9999999999999999999999999999886543 48899999999999999999999999999863
No 477
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=100.00 E-value=7.3e-34 Score=363.57 Aligned_cols=215 Identities=24% Similarity=0.345 Sum_probs=185.2
Q ss_pred cEEEEEEEEEecCC--CCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhH---
Q 000521 1218 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL--- 1292 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l--- 1292 (1446)
.++++|++++|+.+ .+++|+|+||+|++||+++|+|++|||||||+++|.|+++|++|+|.+||.++...+.+++
T Consensus 4 ~l~~~nl~~~y~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 83 (648)
T PRK10535 4 LLELKDIRRSYPSGEEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGQDVATLDADALAQL 83 (648)
T ss_pred EEEEeeEEEEeCCCCCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEcCcCCHHHHHHH
Confidence 48999999999642 2469999999999999999999999999999999999999999999999999999887664
Q ss_pred -hcceEEEeCCCCCCCC-cHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000521 1293 -RGRFAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1367 (1446)
Q Consensus 1293 -R~~i~~VpQdp~lF~g-TIR~NLdp~~---~~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1367 (1446)
|++++|+||+|.+|++ |+.||++... ..+.++ .+....+.++.+|++..+.....+||+|||||++||||
T Consensus 84 ~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~-----~~~~~~~~l~~lgl~~~~~~~~~~LS~Gq~qrv~LAra 158 (648)
T PRK10535 84 RREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGLERKQ-----RLLRAQELLQRLGLEDRVEYQPSQLSGGQQQRVSIARA 158 (648)
T ss_pred HhccEEEEeCCcccCCCCCHHHHHHHHHHHcCCCHHH-----HHHHHHHHHHHCCChhhhcCCcccCCHHHHHHHHHHHH
Confidence 6789999999999975 9999997421 111111 11123445555677777777778999999999999999
Q ss_pred hccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhhcCEEEEEeCCEEEEEeccch
Q 000521 1368 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLVCISFICR 1437 (1446)
Q Consensus 1368 LLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlvl~~G~vvE~~~~~~ 1437 (1446)
++++|++|+|||||++||.++.+.+.+.|++.. +++|+|+|+|+++.+..|||+++|++|+++|.|++..
T Consensus 159 L~~~P~lLllDEP~~gLD~~s~~~l~~ll~~l~~~g~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~ 229 (648)
T PRK10535 159 LMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAQE 229 (648)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEECCCHHHHHhCCEEEEEECCEEEeecCccc
Confidence 999999999999999999999999999998764 4899999999999998999999999999999998764
No 478
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=326.66 Aligned_cols=201 Identities=28% Similarity=0.405 Sum_probs=167.3
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|++++|+.. ..+|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 77 (277)
T PRK13652 3 LIETRDLCYSYSGS-----KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVR 77 (277)
T ss_pred eEEEEEEEEEeCCC-----CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHH
Confidence 36789999998532 2359999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCCC--CCCccHHHHHhcCC---CCChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000521 669 -SIAYVPQVPW--ILSGTIRDNILFGK---NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1446)
Q Consensus 669 -~i~yv~Q~p~--l~~~ti~~nI~~g~---~~~~~----~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi 738 (1446)
.++||+|+|. +++.|++||+.++. .++++ ++++.++.+++.... ......||||||||+
T Consensus 78 ~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~qrl 146 (277)
T PRK13652 78 KFVGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELR-----------DRVPHHLSGGEKKRV 146 (277)
T ss_pred hheEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHh-----------cCCcccCCHHHHHHH
Confidence 3899999983 67789999998753 23332 345666666665433 334468999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhh-hCCEEEEEeCCEEEEecChhHH
Q 000521 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADL 816 (1446)
Q Consensus 739 ~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g~~~~l 816 (1446)
+||||++.+|+++||||||++||+.+.+.+.+. +..... ++.|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 147 ~laraL~~~p~llilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~ 225 (277)
T PRK13652 147 AIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDF-LNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEI 225 (277)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999988775 332122 3789999999999985 5999999999999999999988
Q ss_pred Hh
Q 000521 817 AV 818 (1446)
Q Consensus 817 ~~ 818 (1446)
..
T Consensus 226 ~~ 227 (277)
T PRK13652 226 FL 227 (277)
T ss_pred hc
Confidence 64
No 479
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=9.2e-34 Score=332.90 Aligned_cols=210 Identities=22% Similarity=0.300 Sum_probs=169.5
Q ss_pred CceEEEEecEEEecCCCc-------ccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC---
Q 000521 599 DMAVIMQDATCSWYCNNE-------EEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--- 668 (1446)
Q Consensus 599 ~~~i~~~~~~f~w~~~~~-------~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~--- 668 (1446)
+..++++|++.+|..... .....+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i 85 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDL 85 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEEC
Confidence 346889999998863211 0113479999999999999999999999999999999999999999998865
Q ss_pred -------------eEEEEcCCC--CCC-CccHHHHHhcCC-----CCChh----hHHHHHHHhcchHHHhhccCCCcccc
Q 000521 669 -------------SIAYVPQVP--WIL-SGTIRDNILFGK-----NYDPQ----SYSETLKACTLDVDISLMVGGDMAYI 723 (1446)
Q Consensus 669 -------------~i~yv~Q~p--~l~-~~ti~~nI~~g~-----~~~~~----~~~~v~~~~~l~~di~~~~~gd~t~i 723 (1446)
+|+||+|+| .++ ..||.|||.++. ..+++ +..+.++..++..+ ..
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~----------~~ 155 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPN----------LI 155 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChH----------Hh
Confidence 499999999 355 469999997531 23322 33455666666332 13
Q ss_pred cCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcc-cCCceEEEEccCcchhhh-CCEEEE
Q 000521 724 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVV 801 (1446)
Q Consensus 724 g~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-ad~i~~ 801 (1446)
.....+|||||||||+||||++.+|+++|+||||++||+.+.+++++. +.... ..+.|+|+|||+++.+.. ||+|++
T Consensus 156 ~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~l-L~~l~~~~~~til~iTHdl~~~~~~~dri~v 234 (331)
T PRK15079 156 NRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNL-LQQLQREMGLSLIFIAHDLAVVKHISDRVLV 234 (331)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEE
Confidence 455678999999999999999999999999999999999999999876 33311 237899999999999876 999999
Q ss_pred EeCCEEEEecChhHHHhc
Q 000521 802 MDKGQVKWIGSSADLAVS 819 (1446)
Q Consensus 802 l~~G~i~~~g~~~~l~~~ 819 (1446)
|++|+|++.|+.+++..+
T Consensus 235 l~~G~ive~g~~~~i~~~ 252 (331)
T PRK15079 235 MYLGHAVELGTYDEVYHN 252 (331)
T ss_pred EECCEEEEEcCHHHHHcC
Confidence 999999999999998654
No 480
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-34 Score=327.34 Aligned_cols=204 Identities=26% Similarity=0.347 Sum_probs=168.9
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|+.... .++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~---~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 80 (277)
T PRK13642 4 ILEVENLVFKYEKESD---VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLR 80 (277)
T ss_pred eEEEEEEEEEcCCCCc---CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHh
Confidence 4789999999964211 2369999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCCC--CCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000521 669 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 738 (1446)
Q Consensus 669 -~i~yv~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi 738 (1446)
.++|++|+|. +++.|+.|||.++.. ... ++++++++.+++.... ......||||||||+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv 149 (277)
T PRK13642 81 RKIGMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFK-----------TREPARLSGGQKQRV 149 (277)
T ss_pred cceEEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHh-----------hCCcccCCHHHHHHH
Confidence 3899999984 667899999987521 222 2345566666664322 234568999999999
Q ss_pred HHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHHH
Q 000521 739 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 817 (1446)
Q Consensus 739 ~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l~ 817 (1446)
+||||++.+|+++||||||++||+.+.+.+.+. +..... .|.|+|++||+++.+..||+|++|++|++++.|+++++.
T Consensus 150 ~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (277)
T PRK13642 150 AVAGIIALRPEIIILDESTSMLDPTGRQEIMRV-IHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELF 228 (277)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999988875 332122 278999999999998889999999999999999998876
Q ss_pred hc
Q 000521 818 VS 819 (1446)
Q Consensus 818 ~~ 819 (1446)
..
T Consensus 229 ~~ 230 (277)
T PRK13642 229 AT 230 (277)
T ss_pred cC
Confidence 43
No 481
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-34 Score=326.42 Aligned_cols=205 Identities=26% Similarity=0.368 Sum_probs=169.3
Q ss_pred CCceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEeC----
Q 000521 598 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG---- 668 (1446)
Q Consensus 598 ~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~-----~~G~i~~~~---- 668 (1446)
....++++|+++.|.. . ++|+|+||++++||+++|+|+||||||||+++|+|.+++ ++|+|.++|
T Consensus 22 ~~~~l~~~nl~~~~~~---~---~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~ 95 (272)
T PRK14236 22 EQTALEVRNLNLFYGD---K---QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIY 95 (272)
T ss_pred CCcEEEEEEEEEEECC---e---eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECc
Confidence 3456899999999852 2 359999999999999999999999999999999999874 899998754
Q ss_pred -----------eEEEEcCCCCCCCccHHHHHhcCCCC----C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000521 669 -----------SIAYVPQVPWILSGTIRDNILFGKNY----D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 729 (1446)
Q Consensus 669 -----------~i~yv~Q~p~l~~~ti~~nI~~g~~~----~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~ 729 (1446)
.++|++|++.+++.|++||+.++... . +++..++++..++..++. +..+..+.+
T Consensus 96 ~~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 168 (272)
T PRK14236 96 DKKVDVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFG 168 (272)
T ss_pred ccccCHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCccc
Confidence 48999999999988999999875321 1 123445555555544332 234667889
Q ss_pred cchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-hCCEEEEEeCCEEE
Q 000521 730 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVK 808 (1446)
Q Consensus 730 LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~ 808 (1446)
||||||||++||||++.+|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||+|++|++|+++
T Consensus 169 LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-L~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~ 246 (272)
T PRK14236 169 LSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEEL-ITE-LKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLV 246 (272)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999998888775 333 344689999999999876 49999999999999
Q ss_pred EecChhHHH
Q 000521 809 WIGSSADLA 817 (1446)
Q Consensus 809 ~~g~~~~l~ 817 (1446)
+.|+++++.
T Consensus 247 ~~g~~~~~~ 255 (272)
T PRK14236 247 EYGDTDTLF 255 (272)
T ss_pred ecCCHHHHh
Confidence 999988874
No 482
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-34 Score=306.93 Aligned_cols=216 Identities=25% Similarity=0.395 Sum_probs=184.0
Q ss_pred EEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhH-hcceE
Q 000521 1219 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1297 (1446)
Q Consensus 1219 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1297 (1446)
++.+|++.+|.. -.+++||||++++||.+|++||+||||||+++++.|+|+|++|+|.++|.||..++.+.. |.-|+
T Consensus 5 L~v~~l~k~FGG--l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 5 LEVRGLSKRFGG--LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred eeeccceeecCC--EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 678999999964 369999999999999999999999999999999999999999999999999999998875 44588
Q ss_pred EEeCCCCCCCC-cHHHhcCCCCCC------------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000521 1298 VVPQSPFLFEG-SLRDNLDPFHMN------------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1364 (1446)
Q Consensus 1298 ~VpQdp~lF~g-TIR~NLdp~~~~------------~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1364 (1446)
--.|.+-+|++ |+-||+.-.... ...+-.++.+++ .+.++..||+..-++...+||+||++|+-|
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A--~~~Le~vgL~~~a~~~A~~LsyG~qR~LEI 160 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERA--RELLEFVGLGELADRPAGNLSYGQQRRLEI 160 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHH--HHHHHHcCCchhhcchhhcCChhHhHHHHH
Confidence 88999999987 999998532110 000112222222 334445588888888888999999999999
Q ss_pred HHHhccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1365 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1365 ARALLr~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
||||..+|++|+||||.++|.++-...+.+.|++..+ +.|+++|-|+++.+++ ||||+||+.|+++..|+|+..
T Consensus 161 ArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV 237 (250)
T COG0411 161 ARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEV 237 (250)
T ss_pred HHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHH
Confidence 9999999999999999999999988888899988764 5899999999999987 899999999999999999864
No 483
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=8.8e-34 Score=324.38 Aligned_cols=202 Identities=25% Similarity=0.313 Sum_probs=166.2
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------- 668 (1446)
..++++|+++.|+. . .+|+|+||++++||+++|+|+||||||||+++|.|+++|++|+|.++|
T Consensus 4 ~~l~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~ 77 (257)
T PRK10619 4 NKLNVIDLHKRYGE---H---EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDG 77 (257)
T ss_pred ccEEEeeeEEEECC---E---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccc
Confidence 35889999999852 2 359999999999999999999999999999999999999999998765
Q ss_pred ---------------eEEEEcCCCCCCCc-cHHHHHhcCC----CCCh----hhHHHHHHHhcchHHHhhccCCCccccc
Q 000521 669 ---------------SIAYVPQVPWILSG-TIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIG 724 (1446)
Q Consensus 669 ---------------~i~yv~Q~p~l~~~-ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig 724 (1446)
.++|++|+|.++.. |++||+.++. ..++ ++..+.++..++...+ .+
T Consensus 78 ~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~ 147 (257)
T PRK10619 78 QLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QG 147 (257)
T ss_pred ccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hh
Confidence 38999999998875 9999997642 1221 2334444444443221 14
Q ss_pred CCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEe
Q 000521 725 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMD 803 (1446)
Q Consensus 725 ~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~ 803 (1446)
....+||||||||++||||++++|+++||||||++||+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|+
T Consensus 148 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~ 226 (257)
T PRK10619 148 KYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRI-MQQLAEEGKTMVVVTHEMGFARHVSSHVIFLH 226 (257)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEE
Confidence 45678999999999999999999999999999999999999988875 33312347899999999999886 99999999
Q ss_pred CCEEEEecChhHHHh
Q 000521 804 KGQVKWIGSSADLAV 818 (1446)
Q Consensus 804 ~G~i~~~g~~~~l~~ 818 (1446)
+|++++.|+++++..
T Consensus 227 ~G~i~~~~~~~~~~~ 241 (257)
T PRK10619 227 QGKIEEEGAPEQLFG 241 (257)
T ss_pred CCEEEEeCCHHHhhh
Confidence 999999999888753
No 484
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=322.77 Aligned_cols=203 Identities=26% Similarity=0.347 Sum_probs=165.6
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEeC-------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~-----~~G~i~~~~------- 668 (1446)
.++++|+++.|.. .++++|+||++++||+++|+||||||||||+++|.|+++| ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~ 76 (250)
T PRK14247 3 KIEIRDLKVSFGQ------VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMD 76 (250)
T ss_pred eEEEEeeEEEECC------eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCC
Confidence 4788999998852 2359999999999999999999999999999999999974 799998875
Q ss_pred ------eEEEEcCCCCCC-CccHHHHHhcCCCC-----Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 669 ------SIAYVPQVPWIL-SGTIRDNILFGKNY-----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 669 ------~i~yv~Q~p~l~-~~ti~~nI~~g~~~-----~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
.|||++|+|.++ +.|++||+.++... +. ++..+.++.+++...+. ........+|||
T Consensus 77 ~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 149 (250)
T PRK14247 77 VIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK-------DRLDAPAGKLSG 149 (250)
T ss_pred HHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCCcccCCH
Confidence 489999999755 57999999875321 11 23345556665543221 123455678999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhh-hCCEEEEEeCCEEEEec
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~ad~i~~l~~G~i~~~g 811 (1446)
|||||++||||+..+|++++|||||++||+.+.+++.+. +.. +.+++|+|++||+++.+. .||++++|++|++.+.|
T Consensus 150 G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 227 (250)
T PRK14247 150 GQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESL-FLE-LKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWG 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEEC
Confidence 999999999999999999999999999999999988876 333 345789999999999976 59999999999999999
Q ss_pred ChhHHHh
Q 000521 812 SSADLAV 818 (1446)
Q Consensus 812 ~~~~l~~ 818 (1446)
+++++..
T Consensus 228 ~~~~~~~ 234 (250)
T PRK14247 228 PTREVFT 234 (250)
T ss_pred CHHHHHc
Confidence 9888753
No 485
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=5.2e-34 Score=321.03 Aligned_cols=197 Identities=28% Similarity=0.421 Sum_probs=161.9
Q ss_pred EEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--------------
Q 000521 603 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 668 (1446)
Q Consensus 603 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-------------- 668 (1446)
+++|+++.|+. .++|+|+||++++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 75 (230)
T TIGR03410 2 EVSNLNVYYGQ------SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARA 75 (230)
T ss_pred EEEeEEEEeCC------eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHh
Confidence 57899998852 2359999999999999999999999999999999999999999999875
Q ss_pred eEEEEcCCCCCCCc-cHHHHHhcCCCC-C---hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHH
Q 000521 669 SIAYVPQVPWILSG-TIRDNILFGKNY-D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 743 (1446)
Q Consensus 669 ~i~yv~Q~p~l~~~-ti~~nI~~g~~~-~---~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARa 743 (1446)
.++|++|++.+++. |++||+.++... . .+.++++++..+. ..........+||||||||++||||
T Consensus 76 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~----------l~~~~~~~~~~LS~G~~qrv~la~a 145 (230)
T TIGR03410 76 GIAYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPV----------LKEMLGRRGGDLSGGQQQQLAIARA 145 (230)
T ss_pred CeEEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHh----------HHHHhhCChhhCCHHHHHHHHHHHH
Confidence 38999999998876 999999875321 1 1223334433321 1122355667899999999999999
Q ss_pred HccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHH
Q 000521 744 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 816 (1446)
Q Consensus 744 ly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l 816 (1446)
++.+|++++|||||++||+.+.+++.+. +..... .++|+|++||+++.+.. ||+|+++++|++++.|+.+++
T Consensus 146 l~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 146 LVTRPKLLLLDEPTEGIQPSIIKDIGRV-IRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 9999999999999999999999988875 332122 37899999999999885 999999999999999998876
No 486
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=9.7e-34 Score=301.51 Aligned_cols=161 Identities=25% Similarity=0.393 Sum_probs=144.1
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC--eEEEEcCCCCC
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPWI 679 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~--~i~yv~Q~p~l 679 (1446)
++++|+++.|+.. +++|+|+||++++||+++|+||||||||||+++|+|+.+|++|+|.+++ .++|++|+|.+
T Consensus 1 i~~~~~~~~~~~~-----~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~~ 75 (166)
T cd03223 1 IELENLSLATPDG-----RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPYL 75 (166)
T ss_pred CEEEEEEEEcCCC-----CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCcc
Confidence 3578999988532 2359999999999999999999999999999999999999999999987 79999999999
Q ss_pred CCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCccc
Q 000521 680 LSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSA 759 (1446)
Q Consensus 680 ~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~ 759 (1446)
++.|++||+.++ ....||||||||++||||++++|++++|||||++
T Consensus 76 ~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~ 121 (166)
T cd03223 76 PLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSA 121 (166)
T ss_pred ccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccc
Confidence 989999999864 2468999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeCC
Q 000521 760 VDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKG 805 (1446)
Q Consensus 760 lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~G 805 (1446)
||+.+.+.+.+. +.. . ++|+|++||+.+....||++++|++|
T Consensus 122 LD~~~~~~l~~~-l~~-~--~~tiiivsh~~~~~~~~d~i~~l~~~ 163 (166)
T cd03223 122 LDEESEDRLYQL-LKE-L--GITVISVGHRPSLWKFHDRVLDLDGE 163 (166)
T ss_pred cCHHHHHHHHHH-HHH-h--CCEEEEEeCChhHHhhCCEEEEEcCC
Confidence 999999988876 332 2 58999999999988789999999875
No 487
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.2e-33 Score=382.72 Aligned_cols=216 Identities=24% Similarity=0.325 Sum_probs=185.5
Q ss_pred ccEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEcCeeCCCCChHhHhcce
Q 000521 1217 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1296 (1446)
Q Consensus 1217 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1296 (1446)
..|+++|++++|+++...+|+|+||++++||.+||+|++|||||||+++|.|+++|++|+|.++|.|+.. +....|+++
T Consensus 927 ~~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~I 1005 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSL 1005 (2272)
T ss_pred ceEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcE
Confidence 3699999999996434579999999999999999999999999999999999999999999999999975 567789999
Q ss_pred EEEeCCCCCCCC-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000521 1297 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1372 (1446)
Q Consensus 1297 ~~VpQdp~lF~g-TIR~NLdp~~~---~~d~ei~~aL~~~~L~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1372 (1446)
+++||++.+|+. |++|||.++.. .+.++.++ ...+.++.+||+........+||||||||++|||||+.+|
T Consensus 1006 G~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~-----~v~~lL~~vgL~~~~~~~~~~LSGGqKQRLsLArALi~~P 1080 (2272)
T TIGR01257 1006 GMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL-----EMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDA 1080 (2272)
T ss_pred EEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 999999999975 99999975421 12222211 1223444446666666667789999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCchhHhh-cCEEEEEeCCEEEEEeccchh
Q 000521 1373 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLVCISFICRY 1438 (1446)
Q Consensus 1373 ~ILlLDEaTS~lD~~Te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrIlvl~~G~vvE~~~~~~~ 1438 (1446)
+||+||||||+||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|++..+
T Consensus 1081 kVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~L 1147 (2272)
T TIGR01257 1081 KVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFL 1147 (2272)
T ss_pred CEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999988779999999999999875 899999999999999988743
No 488
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.2e-33 Score=317.63 Aligned_cols=196 Identities=25% Similarity=0.303 Sum_probs=160.8
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|++++|+.... ..++++|+||++++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 6 ~l~~~~l~~~~~~~~~--~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 83 (228)
T PRK10584 6 IVEVHHLKKSVGQGEH--ELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARA 83 (228)
T ss_pred eEEEeeeEEEccCCCc--ceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHH
Confidence 5789999999864211 12359999999999999999999999999999999999999999998764
Q ss_pred -----eEEEEcCCCCCCCc-cHHHHHhcCC---CCC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000521 669 -----SIAYVPQVPWILSG-TIRDNILFGK---NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 735 (1446)
Q Consensus 669 -----~i~yv~Q~p~l~~~-ti~~nI~~g~---~~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQk 735 (1446)
.++|++|+|.++.. |++||+.++. ..+ +++.++.++.+++.+.+. ....+||||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Ge~ 152 (228)
T PRK10584 84 KLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLD-----------HLPAQLSGGEQ 152 (228)
T ss_pred HHHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------CChhhCCHHHH
Confidence 38999999988875 9999997642 111 234566677776654333 33458999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhhCCEEEEEeCCEEEEe
Q 000521 736 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWI 810 (1446)
Q Consensus 736 qRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~ 810 (1446)
||++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+..||++++|++|+++++
T Consensus 153 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 153 QRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADL-LFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999999888876 332112 37899999999999888999999999998753
No 489
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=5e-34 Score=333.27 Aligned_cols=187 Identities=24% Similarity=0.342 Sum_probs=158.9
Q ss_pred ccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------eEEEEcCCCCCCCc-cHHHH
Q 000521 621 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------SIAYVPQVPWILSG-TIRDN 687 (1446)
Q Consensus 621 ~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------~i~yv~Q~p~l~~~-ti~~n 687 (1446)
++|+|+||+|++||+++|+||||||||||+++|+|.++|++|+|.++| .+||++|++.++.. |++||
T Consensus 7 ~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~ 86 (302)
T TIGR01188 7 KAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGREN 86 (302)
T ss_pred eEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHHH
Confidence 359999999999999999999999999999999999999999999876 38999999998875 99999
Q ss_pred HhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcccc
Q 000521 688 ILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAV 760 (1446)
Q Consensus 688 I~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s~l 760 (1446)
+.+... .+ .++.+++++.+++.... .....+||||||||++||||++++|++++|||||++|
T Consensus 87 l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gL 155 (302)
T TIGR01188 87 LEMMGRLYGLPKDEAEERAEELLELFELGEAA-----------DRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGL 155 (302)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-----------CCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 986321 11 23456667777665432 3345689999999999999999999999999999999
Q ss_pred cHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHHhc
Q 000521 761 DAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVS 819 (1446)
Q Consensus 761 D~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~~ 819 (1446)
|+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 156 D~~~~~~l~~~-l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 156 DPRTRRAIWDY-IRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 99999988875 33312357899999999999875 999999999999999999998654
No 490
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-33 Score=322.82 Aligned_cols=204 Identities=25% Similarity=0.332 Sum_probs=169.2
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEeC------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------ 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~-----~~~G~i~~~~------ 668 (1446)
..++++|++++|.. . ++|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 9 ~~l~i~~v~~~~~~---~---~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 82 (264)
T PRK14243 9 TVLRTENLNVYYGS---F---LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAP 82 (264)
T ss_pred eEEEEeeeEEEECC---E---EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEcccc
Confidence 36899999999852 2 35999999999999999999999999999999999876 4799998765
Q ss_pred ---------eEEEEcCCCCCCCccHHHHHhcCCCC---C---hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchH
Q 000521 669 ---------SIAYVPQVPWILSGTIRDNILFGKNY---D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 733 (1446)
Q Consensus 669 ---------~i~yv~Q~p~l~~~ti~~nI~~g~~~---~---~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGG 733 (1446)
.++|++|+|.+++.|++||+.++... . +++..++++.+++..++.. ..+..+.+||||
T Consensus 83 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgG 155 (264)
T PRK14243 83 DVDPVEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGG 155 (264)
T ss_pred ccChHHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHH
Confidence 38999999999988999999876431 1 1334455666666544431 235677899999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEe---------
Q 000521 734 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMD--------- 803 (1446)
Q Consensus 734 QkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~--------- 803 (1446)
||||++||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||+|++|+
T Consensus 156 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~ 233 (264)
T PRK14243 156 QQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEEL-MHE-LKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGR 233 (264)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEecCHHHHHHhCCEEEEEeccccccccc
Confidence 99999999999999999999999999999999988875 333 3446899999999998765 99999998
Q ss_pred CCEEEEecChhHHHh
Q 000521 804 KGQVKWIGSSADLAV 818 (1446)
Q Consensus 804 ~G~i~~~g~~~~l~~ 818 (1446)
+|++++.|+.+|+..
T Consensus 234 ~g~i~~~~~~~~~~~ 248 (264)
T PRK14243 234 YGYLVEFDRTEKIFN 248 (264)
T ss_pred CceEEEeCCHHHHHh
Confidence 799999999988854
No 491
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-33 Score=316.47 Aligned_cols=197 Identities=27% Similarity=0.403 Sum_probs=164.3
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------eE
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 670 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~-----------~i 670 (1446)
++++|++++|+. . ..|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 2 l~~~~l~~~~~~-----~---~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i 73 (232)
T PRK10771 2 LKLTDITWLYHH-----L---PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPV 73 (232)
T ss_pred eEEEEEEEEECC-----c---cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccE
Confidence 578999999852 1 2489999999999999999999999999999999999999999876 38
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCC--C--C---hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHH
Q 000521 671 AYVPQVPWILSG-TIRDNILFGKN--Y--D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 742 (1446)
Q Consensus 671 ~yv~Q~p~l~~~-ti~~nI~~g~~--~--~---~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lAR 742 (1446)
+|++|+|.++.+ |++||+.++.. . . +++..++++..+++..+.. ....||||||||++|||
T Consensus 74 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lar 142 (232)
T PRK10771 74 SMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLAR-----------LPGQLSGGQRQRVALAR 142 (232)
T ss_pred EEEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhC-----------CcccCCHHHHHHHHHHH
Confidence 999999998875 99999987531 1 1 2345566676666544433 33589999999999999
Q ss_pred HHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhHHHh
Q 000521 743 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 818 (1446)
Q Consensus 743 aly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~l~~ 818 (1446)
|++++|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+.. ||++++|++|++.+.|+++++..
T Consensus 143 al~~~p~lllLDEP~~gLD~~~~~~~~~~-l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~ 219 (232)
T PRK10771 143 CLVREQPILLLDEPFSALDPALRQEMLTL-VSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLS 219 (232)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999888875 332122 37899999999999875 99999999999999999888754
No 492
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=4.5e-34 Score=318.00 Aligned_cols=188 Identities=23% Similarity=0.400 Sum_probs=155.5
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|+++.|+.+ ..+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-----~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (214)
T TIGR02673 2 IEFHNVSKAYPGG-----VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPL 76 (214)
T ss_pred EEEEeeeEEeCCC-----ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHH
Confidence 5788999998421 2359999999999999999999999999999999999999999998765
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 ---SIAYVPQVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 ---~i~yv~Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
.++|++|+|.++. .|++||+.++.. .+ +++.++.++..++..... ....+||||||||
T Consensus 77 ~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr 145 (214)
T TIGR02673 77 LRRRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKAD-----------AFPEQLSGGEQQR 145 (214)
T ss_pred HHhheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHH
Confidence 3899999999886 599999987521 22 234556666666654333 2345899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCE
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQ 806 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~ 806 (1446)
++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|+
T Consensus 146 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 146 VAIARAIVNSPPLLLADEPTGNLDPDLSERILDL-LKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 9999999999999999999999999999988876 33212347899999999999876 99999999984
No 493
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=325.34 Aligned_cols=203 Identities=25% Similarity=0.382 Sum_probs=166.8
Q ss_pred ceEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-----------
Q 000521 600 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 668 (1446)
Q Consensus 600 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~----------- 668 (1446)
..++++|+++.|+.. ..++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~i~~l~~~~~~~----~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~ 81 (269)
T PRK13648 6 SIIVFKNVSFQYQSD----ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKL 81 (269)
T ss_pred ceEEEEEEEEEcCCC----CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHH
Confidence 358899999998632 12359999999999999999999999999999999999999999999976
Q ss_pred --eEEEEcCCCC--CCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000521 669 --SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 737 (1446)
Q Consensus 669 --~i~yv~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqR 737 (1446)
.++|++|+|+ +++.|+++|+.++.. ... ++.+++++..++... ......+||||||||
T Consensus 82 ~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr 150 (269)
T PRK13648 82 RKHIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLER-----------ADYEPNALSGGQKQR 150 (269)
T ss_pred HhheeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCCcccCCHHHHHH
Confidence 3899999996 445699999988632 222 223344555554432 234567899999999
Q ss_pred HHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCccc-CCceEEEEccCcchhhhCCEEEEEeCCEEEEecChhHH
Q 000521 738 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 816 (1446)
Q Consensus 738 i~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~ad~i~~l~~G~i~~~g~~~~l 816 (1446)
++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+..||+|++|++|++++.|+++++
T Consensus 151 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 229 (269)
T PRK13648 151 VAIAGVLALNPSVIILDEATSMLDPDARQNLLDL-VRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEI 229 (269)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988875 333122 37899999999999888999999999999999999887
Q ss_pred Hh
Q 000521 817 AV 818 (1446)
Q Consensus 817 ~~ 818 (1446)
..
T Consensus 230 ~~ 231 (269)
T PRK13648 230 FD 231 (269)
T ss_pred hc
Confidence 54
No 494
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.99 Aligned_cols=198 Identities=24% Similarity=0.402 Sum_probs=165.0
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|++++|+. +.+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 3 l~~~~l~~~~~~------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (255)
T PRK11231 3 LRTENLTVGYGT------KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLAR 76 (255)
T ss_pred EEEEeEEEEECC------EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhh
Confidence 678999999852 2359999999999999999999999999999999999999999999876
Q ss_pred eEEEEcCCCCCCCc-cHHHHHhcCCC-----C------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHH
Q 000521 669 SIAYVPQVPWILSG-TIRDNILFGKN-----Y------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 736 (1446)
Q Consensus 669 ~i~yv~Q~p~l~~~-ti~~nI~~g~~-----~------~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkq 736 (1446)
.++|++|++.++.+ |++||+.++.. + +.++.+++++.++++.. .......|||||||
T Consensus 77 ~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~q 145 (255)
T PRK11231 77 RLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHL-----------ADRRLTDLSGGQRQ 145 (255)
T ss_pred heEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHH-----------HcCCcccCCHHHHH
Confidence 39999999988876 99999987631 1 12234455555555432 23456789999999
Q ss_pred HHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecChhH
Q 000521 737 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 815 (1446)
Q Consensus 737 Ri~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~~~~ 815 (1446)
|++||||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++...|++++
T Consensus 146 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 224 (255)
T PRK11231 146 RAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRL-MRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEE 224 (255)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHH
Confidence 99999999999999999999999999999988876 33212347899999999998765 99999999999999999887
Q ss_pred HH
Q 000521 816 LA 817 (1446)
Q Consensus 816 l~ 817 (1446)
+.
T Consensus 225 ~~ 226 (255)
T PRK11231 225 VM 226 (255)
T ss_pred hc
Confidence 64
No 495
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=8.6e-33 Score=355.98 Aligned_cols=214 Identities=24% Similarity=0.297 Sum_probs=145.7
Q ss_pred cEEEEEEEEEecCCCCcccceeeEEEeCCcEEEEECCCCCCHHHHHHHHh------cCCC----C-----------CCce
Q 000521 1218 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALF------RLTP----I-----------CGGQ 1276 (1446)
Q Consensus 1218 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~------rl~~----~-----------~~G~ 1276 (1446)
.++++|++. ..|+|+||+|++||.+||+|+||||||||++-.+ ++.+ | -.--
T Consensus 612 ~l~l~~~~~-------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (924)
T TIGR00630 612 FLTLKGARE-------NNLKNITVSIPLGLFTCITGVSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKV 684 (924)
T ss_pred eEEEEeCcc-------CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccccccCCCce
Confidence 488888862 2599999999999999999999999999998333 1111 1 1113
Q ss_pred EEEcCeeCCCCCh----------HhHhcceEEEeC------CCCCCCC--------------cHHHhcCCC---------
Q 000521 1277 ILVDGLNIINTPV----------RDLRGRFAVVPQ------SPFLFEG--------------SLRDNLDPF--------- 1317 (1446)
Q Consensus 1277 I~IDG~di~~i~~----------~~lR~~i~~VpQ------dp~lF~g--------------TIR~NLdp~--------- 1317 (1446)
|.||-.+|..-++ +.+|.-++=.|+ .+-.|+- .+.-++.+.
T Consensus 685 v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 764 (924)
T TIGR00630 685 IHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEV 764 (924)
T ss_pred EEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCCCcccCCCC
Confidence 5666655543322 234555544443 1222321 111111100
Q ss_pred ---CCCChH---------HH--------HHHHHHc----c---HHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHhc
Q 000521 1318 ---HMNDDL---------KI--------WSVLEKC----H---VKEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1369 (1446)
Q Consensus 1318 ---~~~~d~---------ei--------~~aL~~~----~---L~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL 1369 (1446)
..+.++ .| .++++-. . ..+.++.+||+. .++.....||||||||++|||+|.
T Consensus 765 C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~ 844 (924)
T TIGR00630 765 CKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELS 844 (924)
T ss_pred cCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHHh
Confidence 011111 01 1111111 1 112233347775 467778899999999999999999
Q ss_pred c---CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCchhHhhcCEEEEE------eCCEEEEEeccchh
Q 000521 1370 K---SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL------DHGHLVCISFICRY 1438 (1446)
Q Consensus 1370 r---~~~ILlLDEaTS~lD~~Te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrIlvl------~~G~vvE~~~~~~~ 1438 (1446)
+ +|+++||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|..+
T Consensus 845 ~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 845 KRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIKTADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 7 489999999999999999999999998764 488999999999999999999999 79999999998753
No 496
>KOG0060 consensus Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=3.8e-31 Score=308.33 Aligned_cols=478 Identities=19% Similarity=0.223 Sum_probs=322.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHHH---HHHHhHHHHHHHHHH-HHH
Q 000521 318 AIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQ---TFMSVDTDRTVNLAN-SFH 393 (1446)
Q Consensus 318 ~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~---nlms~D~~~i~~~~~-~~~ 393 (1446)
+.-.+++..+.+.+.....|....+..+.|..+..-+|++=++-..-..-......|. .+++.|+++...... ...
T Consensus 125 ~~~~~~~~~~~s~~~a~~ky~~~~L~Lr~R~~ltk~lh~~Y~k~~~yYkis~~d~ridNPDQrltqDv~kf~~~l~sl~s 204 (659)
T KOG0060|consen 125 LFKYVLLIPGISLLNALLKFTTNELYLRFRKNLTKYLHRLYFKGFTYYKLSNLDDRIDNPDQRLTQDVEKFCRQLSSLYS 204 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHHHhccceEEEecccccccCChHHHHhHHHHHHHHHHHHHHH
Confidence 3334445556667777788889999999999999999999887643322211222233 378899999887544 455
Q ss_pred HHHHHHHHHHHHHHHHhhHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhHHHHHHcCc
Q 000521 394 DAWSLPFQIGVALYLLYTQVKFAFVSGLA-ITILLIPVNKWIANLIANATEKMMKQ-KDERIRRTGEILTHIRTLKMYGW 471 (1446)
Q Consensus 394 ~~~~~pl~i~i~~~lL~~~lg~a~l~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~-~d~R~~~~~e~L~~ik~IK~~g~ 471 (1446)
.+..+|+-++...|.++...||-..+.+. -+++-..++..+.+-+.+...++.+. -|=|. .-+++..|...|-+|+.
T Consensus 205 ~l~~a~~di~~Y~~~l~~s~g~~gp~~i~~Yf~~~~vi~~~L~~pI~~l~~~qeklEGdfRy-~h~rlr~NaE~iAFY~g 283 (659)
T KOG0060|consen 205 NLLKAPFDLVYYTFRLFESAGWLGPVSIFAYFLIGTVINKTLRGPIVKLTVEQEKLEGDFRY-KHSRLRVNAEEIAFYRG 283 (659)
T ss_pred hhhccceeeehhhhHHhhhcCcccHHHHHHHHHHHHHHHhhhccchhHHHHHHHHhhcchhh-heeeeeecchhhhhhcc
Confidence 67778888888889999988875544332 22223344444444444333332222 23333 33567778899999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhC---CCCCHhHHHHHH----HHHHHH
Q 000521 472 EQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLF---ALMG---HQLDAAMVFTCL----ALFNSL 541 (1446)
Q Consensus 472 e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~---~~~~---~~Lt~~~~ft~l----~l~~~l 541 (1446)
+......++..-+.-++.++......-+..++.+..-.+..++.+.+. .+.+ +.++++..+.-+ .++..+
T Consensus 284 ~~~E~~~~~~~f~~Lv~~l~~l~~~r~~l~f~~n~~~Ylg~ilsy~vi~~p~Fs~h~y~~~s~aEL~~~i~~na~~~i~L 363 (659)
T KOG0060|consen 284 GQVEHQRTDQRFRNLVQHLRELMSFRFWLGFIDNIFDYLGGILSYVVIAIPFFSGHVYDDLSPAELSGLISNNAFVFIYL 363 (659)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeeEEeeeeecccccCCcCHHHHHHHHhhhHHHHHHH
Confidence 877766666554555555544433332222222222222222211110 0112 357777766554 234455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CCc-----hhhh-h---hcCCCCcccCCCccCCCCCceEEEEecEEEe
Q 000521 542 ISPLNSFPWVINGLIDAFISIRRLTRFLGCS-EYK-----HELE-Q---AANSPSYISNGLSNFNSKDMAVIMQDATCSW 611 (1446)
Q Consensus 542 ~~pl~~l~~~i~~~~~a~~s~~RI~~fL~~~-e~~-----~~~~-~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w 611 (1446)
...+..+...-..+.+--+-..||.++.+.- +.. ...+ . +.........|......++..|++++++++-
T Consensus 364 i~~f~~l~~~~~~ls~lsGyt~Ri~el~~~l~d~~~~~~~~~~~~~~~~E~~~~l~~~~G~~~~~~~Dn~i~~e~v~l~t 443 (659)
T KOG0060|consen 364 ISAFGRLVDLSRDLSRLSGYTHRIGELMEVLDDLSSGSQECTMEEEELGEAEWGLSLPPGSGKAEPADNAIEFEEVSLST 443 (659)
T ss_pred HHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHHhccCCcchhhhhhhhhhhhhccCCCCCCcccccccceEEeeeeeecC
Confidence 5556666666666666666677888887421 000 0000 0 0000000011111223456889999999987
Q ss_pred cCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEe--C---eEEEEcCCCCCCCccHHH
Q 000521 612 YCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHAS--G---SIAYVPQVPWILSGTIRD 686 (1446)
Q Consensus 612 ~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~--~---~i~yv~Q~p~l~~~ti~~ 686 (1446)
|++ . ..+.+|+||+|+.|+-+.|+||||||||+|++.+.|..+..+|++... | .+-|+||.|....||.||
T Consensus 444 Pt~--g--~~lie~Ls~~V~~g~~LLItG~sG~GKtSLlRvlggLWp~~~G~l~k~~~~~~~~lfflPQrPYmt~GTLRd 519 (659)
T KOG0060|consen 444 PTN--G--DLLIENLSLEVPSGQNLLITGPSGCGKTSLLRVLGGLWPSTGGKLTKPTDGGPKDLFFLPQRPYMTLGTLRD 519 (659)
T ss_pred CCC--C--ceeeeeeeeEecCCCeEEEECCCCCchhHHHHHHhcccccCCCeEEecccCCCCceEEecCCCCccccchhh
Confidence 654 1 235788999999999999999999999999999999999999999764 3 499999999999999999
Q ss_pred HHhcCC--------CCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCcc
Q 000521 687 NILFGK--------NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLS 758 (1446)
Q Consensus 687 nI~~g~--------~~~~~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGGQkqRi~lARaly~~~~illLDep~s 758 (1446)
-+.+.. ..++++..+.++-.+|.+-++...+=|+..+-+-...||+|+|||+|.||-+|++|++-+|||+||
T Consensus 520 QvIYP~~~~~~~~~~~~d~~i~r~Le~v~L~hl~~r~ggld~~~~~dW~dvLS~GEqQRLa~ARLfy~kPk~AiLDE~TS 599 (659)
T KOG0060|consen 520 QVIYPLKAEDMDSKSASDEDILRILENVQLGHLLEREGGLDQQVDWDWMDVLSPGEQQRLAFARLFYHKPKFAILDECTS 599 (659)
T ss_pred eeeccCccccccccCCCHHHHHHHHHHhhhhhHHHHhCCCCchhhccHHhhcCHHHHHHHHHHHHHhcCCceEEeechhh
Confidence 999872 235678889999999986665554334344566778999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhhCCEEEEEeC
Q 000521 759 AVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 804 (1446)
Q Consensus 759 ~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~ad~i~~l~~ 804 (1446)
|+|.+++..+.+.| ...|.|.|-|.||.+.-+.-|.++-|+.
T Consensus 600 Av~~dvE~~~Yr~~----r~~giT~iSVgHRkSL~kfHd~~L~~~g 641 (659)
T KOG0060|consen 600 AVTEDVEGALYRKC----REMGITFISVGHRKSLWKFHDYVLRMDG 641 (659)
T ss_pred hccHHHHHHHHHHH----HHcCCeEEEeccHHHHHhhhhEEEEecC
Confidence 99999999999875 2357899999999999999999999975
No 497
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-34 Score=323.56 Aligned_cols=202 Identities=22% Similarity=0.322 Sum_probs=165.1
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCcc-----CCCcEEEEeC--------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG-------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~-----~~~G~i~~~~-------- 668 (1446)
-+++|+++.|.. +++|+|+||++++||+++|+|+||||||||+++|.|..+ |++|+|.++|
T Consensus 6 ~~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~ 79 (251)
T PRK14244 6 ASVKNLNLWYGS------KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDT 79 (251)
T ss_pred EEeeeEEEEECC------eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhccc
Confidence 467899998852 235999999999999999999999999999999999986 4799998865
Q ss_pred -------eEEEEcCCCCCCCccHHHHHhcCCCC-----Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 669 -------SIAYVPQVPWILSGTIRDNILFGKNY-----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 669 -------~i~yv~Q~p~l~~~ti~~nI~~g~~~-----~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
.++|++|+|.+++.|++||+.++... +. ++..++++..++..++. +..+..+.+|||
T Consensus 80 ~~~~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 152 (251)
T PRK14244 80 NVVLLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSG 152 (251)
T ss_pred chHHHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCH
Confidence 38999999999989999999875211 11 12334455555543221 234566789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 153 Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~ 230 (251)
T PRK14244 153 GQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENL-IQE-LKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYN 230 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999998888765 433 3457899999999999875 9999999999999999
Q ss_pred ChhHHHh
Q 000521 812 SSADLAV 818 (1446)
Q Consensus 812 ~~~~l~~ 818 (1446)
+++++..
T Consensus 231 ~~~~~~~ 237 (251)
T PRK14244 231 TTQEIFK 237 (251)
T ss_pred CHHHHhc
Confidence 9888753
No 498
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=8.9e-34 Score=323.30 Aligned_cols=198 Identities=26% Similarity=0.343 Sum_probs=163.1
Q ss_pred EEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC-------------
Q 000521 602 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 668 (1446)
Q Consensus 602 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------- 668 (1446)
++++|+++.|.. .++|+|+||++++|++++|+||||||||||+++|.|+++|++|+|.++|
T Consensus 4 l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 77 (250)
T PRK11264 4 IEVKNLVKKFHG------QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQK 77 (250)
T ss_pred EEEeceEEEECC------eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchh
Confidence 678999999852 2359999999999999999999999999999999999999999997653
Q ss_pred --------eEEEEcCCCCCCC-ccHHHHHhcCC----CCCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000521 669 --------SIAYVPQVPWILS-GTIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 731 (1446)
Q Consensus 669 --------~i~yv~Q~p~l~~-~ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LS 731 (1446)
.++|++|+|.+++ .|++||+.++. ..+. ++..+.++..++.. .......+||
T Consensus 78 ~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS 146 (250)
T PRK11264 78 GLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAG-----------KETSYPRRLS 146 (250)
T ss_pred hHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcc-----------hhhCChhhCC
Confidence 3899999998886 59999997642 1221 22334444444432 2345677999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEe
Q 000521 732 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 810 (1446)
Q Consensus 732 GGQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~ 810 (1446)
||||||++||||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.
T Consensus 147 ~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~ 225 (250)
T PRK11264 147 GGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNT-IRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQ 225 (250)
T ss_pred hHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999988875 33212347899999999999865 999999999999999
Q ss_pred cChhHHH
Q 000521 811 GSSADLA 817 (1446)
Q Consensus 811 g~~~~l~ 817 (1446)
|+.+++.
T Consensus 226 ~~~~~~~ 232 (250)
T PRK11264 226 GPAKALF 232 (250)
T ss_pred CCHHHHh
Confidence 9988874
No 499
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=321.55 Aligned_cols=202 Identities=22% Similarity=0.307 Sum_probs=166.3
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccC-----CCcEEEEeC-------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~-----~~G~i~~~~------- 668 (1446)
.++++|+++.|.. +++|+|+||++++||+++|+||||||||||+++|.|..+| ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~ 76 (249)
T PRK14253 3 KFNIENLDLFYGE------NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNI 76 (249)
T ss_pred eEEEeccEEEECC------eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEccccc
Confidence 4678999999852 2359999999999999999999999999999999999986 599998865
Q ss_pred -------eEEEEcCCCCCCCccHHHHHhcCCCC---C-h----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchH
Q 000521 669 -------SIAYVPQVPWILSGTIRDNILFGKNY---D-P----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 733 (1446)
Q Consensus 669 -------~i~yv~Q~p~l~~~ti~~nI~~g~~~---~-~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSGG 733 (1446)
.++|++|+|.+++.|++||+.++... . + ++..+.++..++.+++. +.......+||||
T Consensus 77 ~~~~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G 149 (249)
T PRK14253 77 DVADLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGG 149 (249)
T ss_pred chHHHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHH
Confidence 38999999999989999999875321 1 1 12334445555544332 2345667899999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEecC
Q 000521 734 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 812 (1446)
Q Consensus 734 QkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g~ 812 (1446)
|||||+||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 150 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~ 227 (249)
T PRK14253 150 QQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEEL-MEE-LKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDD 227 (249)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999998888775 433 4456899999999999776 99999999999999999
Q ss_pred hhHHH
Q 000521 813 SADLA 817 (1446)
Q Consensus 813 ~~~l~ 817 (1446)
.+++.
T Consensus 228 ~~~~~ 232 (249)
T PRK14253 228 TQVIF 232 (249)
T ss_pred HHHHH
Confidence 87764
No 500
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=320.13 Aligned_cols=198 Identities=25% Similarity=0.380 Sum_probs=162.4
Q ss_pred eEEEEecEEEecCCCcccccccceeeeeEeeCCcEEEEEcCCCCcHHHHHHHHhcCccCCCcEEEEeC------------
Q 000521 601 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 668 (1446)
Q Consensus 601 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~llg~~~~~~G~i~~~~------------ 668 (1446)
.++++|+++.|.. +.+|+|+||++++||+++|+||||||||||+++|+|..+|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 75 (242)
T PRK11124 2 SIQLNGINCFYGA------HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDK 75 (242)
T ss_pred EEEEEeeEEEECC------eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchh
Confidence 3678999999852 2359999999999999999999999999999999999999999998864
Q ss_pred -------eEEEEcCCCCCCCc-cHHHHHhcCC----CCCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000521 669 -------SIAYVPQVPWILSG-TIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 732 (1446)
Q Consensus 669 -------~i~yv~Q~p~l~~~-ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~di~~~~~gd~t~ig~~g~~LSG 732 (1446)
.++|++|+|.++.. |++|||.++. .... ++..+.++..+++. .......+|||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS~ 144 (242)
T PRK11124 76 AIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKP-----------YADRFPLHLSG 144 (242)
T ss_pred hHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCH
Confidence 38999999998865 9999997421 1111 22344444444432 23445568999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCcccccHHHHHHHHHHhhcCcccCCceEEEEccCcchhhh-CCEEEEEeCCEEEEec
Q 000521 733 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 811 (1446)
Q Consensus 733 GQkqRi~lARaly~~~~illLDep~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-ad~i~~l~~G~i~~~g 811 (1446)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+.+.+.. ||++++|++|++++.|
T Consensus 145 G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~ 223 (242)
T PRK11124 145 GQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSI-IRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQG 223 (242)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999988875 33212347899999999999865 9999999999999999
Q ss_pred ChhHH
Q 000521 812 SSADL 816 (1446)
Q Consensus 812 ~~~~l 816 (1446)
+++++
T Consensus 224 ~~~~~ 228 (242)
T PRK11124 224 DASCF 228 (242)
T ss_pred CHHHh
Confidence 88765
Done!