Query 000522
Match_columns 1445
No_of_seqs 693 out of 5617
Neff 7.8
Searched_HMMs 46136
Date Mon Apr 1 17:53:29 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000522.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000522hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 4E-258 8E-263 2448.9 139.5 1221 202-1442 122-1360(1381)
2 TIGR00957 MRP_assoc_pro multi 100.0 1E-208 3E-213 2117.3 166.8 1390 17-1442 23-1506(1522)
3 PLN03130 ABC transporter C fam 100.0 1E-208 3E-213 2111.2 163.9 1412 2-1442 7-1459(1622)
4 PLN03232 ABC transporter C fam 100.0 1E-204 3E-209 2075.4 163.3 1412 4-1442 9-1456(1495)
5 TIGR01271 CFTR_protein cystic 100.0 7E-194 2E-198 1965.5 145.3 1215 202-1442 3-1438(1490)
6 PTZ00243 ABC transporter; Prov 100.0 1E-183 2E-188 1864.2 147.0 1234 201-1442 58-1531(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 3E-144 6E-149 1358.6 105.8 1141 268-1442 14-1211(1228)
8 PTZ00265 multidrug resistance 100.0 4E-132 9E-137 1345.5 131.2 1145 269-1442 50-1450(1466)
9 KOG0058 Peptide exporter, ABC 100.0 5.2E-87 1.1E-91 799.4 56.0 546 886-1442 135-689 (716)
10 COG2274 SunT ABC-type bacterio 100.0 4.9E-79 1.1E-83 765.0 62.9 528 905-1442 160-694 (709)
11 COG1132 MdlB ABC-type multidru 100.0 2.2E-75 4.8E-80 740.9 63.0 527 906-1442 21-550 (567)
12 PRK11174 cysteine/glutathione 100.0 9.5E-75 2.1E-79 739.3 67.3 549 889-1442 13-570 (588)
13 TIGR00958 3a01208 Conjugate Tr 100.0 1.1E-74 2.4E-79 748.6 63.7 528 904-1442 166-700 (711)
14 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 8.4E-74 1.8E-78 741.5 66.7 527 906-1442 143-671 (686)
15 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.7E-73 3.6E-78 742.2 64.1 529 907-1442 162-698 (710)
16 TIGR01193 bacteriocin_ABC ABC- 100.0 5E-73 1.1E-77 736.8 63.8 545 886-1442 144-695 (708)
17 TIGR03375 type_I_sec_LssB type 100.0 9.4E-73 2E-77 732.7 66.1 530 906-1442 154-686 (694)
18 PRK10790 putative multidrug tr 100.0 1.9E-72 4.1E-77 718.2 65.6 528 905-1442 29-561 (592)
19 PRK11176 lipid transporter ATP 100.0 4.4E-72 9.5E-77 714.5 64.4 530 906-1442 32-565 (582)
20 KOG0055 Multidrug/pheromone ex 100.0 1.5E-73 3.1E-78 719.3 44.4 502 937-1442 69-574 (1228)
21 COG4988 CydD ABC-type transpor 100.0 3.5E-71 7.5E-76 653.2 60.2 497 938-1443 39-542 (559)
22 COG2274 SunT ABC-type bacterio 100.0 1.6E-70 3.4E-75 688.3 68.5 544 267-829 142-703 (709)
23 TIGR02203 MsbA_lipidA lipid A 100.0 4.4E-71 9.6E-76 704.5 64.5 530 906-1442 21-554 (571)
24 PRK11160 cysteine/glutathione 100.0 7.9E-71 1.7E-75 697.8 64.8 491 945-1442 66-560 (574)
25 KOG0058 Peptide exporter, ABC 100.0 9.5E-71 2.1E-75 659.5 59.1 541 272-830 140-700 (716)
26 COG4987 CydC ABC-type transpor 100.0 8.3E-71 1.8E-75 637.2 56.5 488 947-1442 66-559 (573)
27 TIGR02868 CydC thiol reductant 100.0 1.3E-70 2.8E-75 692.7 63.1 463 948-1416 62-529 (529)
28 TIGR01846 type_I_sec_HlyB type 100.0 3E-70 6.6E-75 708.5 65.6 527 909-1442 149-678 (694)
29 PRK11174 cysteine/glutathione 100.0 1.5E-69 3.3E-74 691.5 68.8 534 270-828 13-578 (588)
30 TIGR02204 MsbA_rel ABC transpo 100.0 4.1E-69 8.9E-74 686.8 64.7 532 907-1442 26-561 (576)
31 PRK13657 cyclic beta-1,2-gluca 100.0 8.1E-69 1.8E-73 683.8 67.3 530 904-1442 24-556 (588)
32 TIGR02857 CydD thiol reductant 100.0 9.8E-69 2.1E-73 675.6 64.9 515 906-1428 10-529 (529)
33 KOG0056 Heavy metal exporter H 100.0 2.7E-71 5.9E-76 622.6 33.7 477 953-1442 273-759 (790)
34 KOG0057 Mitochondrial Fe/S clu 100.0 2E-68 4.3E-73 617.5 54.0 496 939-1443 74-573 (591)
35 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.8E-67 6E-72 680.7 70.6 538 268-828 125-679 (686)
36 PRK10789 putative multidrug tr 100.0 4E-68 8.6E-73 673.1 60.8 495 940-1442 37-536 (569)
37 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.1E-67 8.9E-72 682.2 71.2 545 270-828 145-706 (710)
38 TIGR01192 chvA glucan exporter 100.0 4E-67 8.6E-72 664.8 66.6 528 905-1442 25-556 (585)
39 TIGR03375 type_I_sec_LssB type 100.0 1.3E-66 2.8E-71 675.3 72.5 535 269-823 137-689 (694)
40 TIGR00958 3a01208 Conjugate Tr 100.0 3.7E-66 8E-71 669.3 71.7 535 274-827 156-707 (711)
41 TIGR01842 type_I_sec_PrtD type 100.0 3.7E-66 8.1E-71 652.8 64.8 522 907-1442 14-540 (544)
42 TIGR01193 bacteriocin_ABC ABC- 100.0 1.3E-65 2.9E-70 667.2 70.9 536 272-828 149-703 (708)
43 PRK11176 lipid transporter ATP 100.0 1.3E-64 2.9E-69 645.7 69.5 540 271-829 17-574 (582)
44 COG1123 ATPase components of v 100.0 5E-67 1.1E-71 621.9 43.3 458 605-1439 5-514 (539)
45 TIGR02203 MsbA_lipidA lipid A 100.0 2.6E-64 5.7E-69 642.3 68.5 534 272-824 7-558 (571)
46 PTZ00265 multidrug resistance 100.0 9.1E-65 2E-69 688.8 63.7 529 898-1431 59-655 (1466)
47 PRK10790 putative multidrug tr 100.0 1.8E-63 4E-68 635.6 69.3 532 272-829 16-570 (592)
48 TIGR02204 MsbA_rel ABC transpo 100.0 2.3E-63 4.9E-68 634.0 69.4 539 269-825 8-566 (576)
49 TIGR02868 CydC thiol reductant 100.0 1.8E-63 3.9E-68 627.8 67.5 505 272-794 6-529 (529)
50 COG5265 ATM1 ABC-type transpor 100.0 1.9E-66 4.1E-71 581.8 34.8 475 962-1442 5-484 (497)
51 PRK10261 glutathione transport 100.0 2.2E-65 4.8E-70 651.2 46.6 478 603-1441 10-550 (623)
52 TIGR01846 type_I_sec_HlyB type 100.0 1.1E-62 2.4E-67 637.9 70.5 542 269-829 129-687 (694)
53 TIGR01194 cyc_pep_trnsptr cycl 100.0 3E-63 6.4E-68 626.3 63.3 510 907-1436 26-551 (555)
54 TIGR00956 3a01205 Pleiotropic 100.0 3.8E-64 8.1E-69 682.8 59.1 248 1183-1442 717-991 (1394)
55 PRK13549 xylose transporter AT 100.0 6.2E-65 1.4E-69 635.7 44.8 442 605-1442 5-492 (506)
56 PRK11160 cysteine/glutathione 100.0 2.8E-62 6.1E-67 619.7 69.0 534 273-828 10-568 (574)
57 TIGR01842 type_I_sec_PrtD type 100.0 2.7E-62 5.9E-67 617.7 68.2 520 276-822 3-542 (544)
58 PRK13657 cyclic beta-1,2-gluca 100.0 3.4E-62 7.5E-67 622.9 69.7 533 273-829 13-565 (588)
59 PRK09700 D-allose transporter 100.0 2.6E-64 5.5E-69 631.3 45.6 439 605-1439 5-493 (510)
60 PRK10789 putative multidrug tr 100.0 4.7E-62 1E-66 617.7 66.5 522 288-828 4-544 (569)
61 PRK15134 microcin C ABC transp 100.0 1.2E-64 2.7E-69 636.3 42.0 449 605-1441 5-512 (529)
62 COG4618 ArpD ABC-type protease 100.0 1.1E-62 2.5E-67 563.5 52.5 530 267-823 11-561 (580)
63 TIGR03269 met_CoM_red_A2 methy 100.0 2.2E-64 4.8E-69 633.3 41.4 434 606-1441 1-514 (520)
64 PRK10762 D-ribose transporter 100.0 5E-64 1.1E-68 626.8 43.5 435 605-1442 4-482 (501)
65 COG1132 MdlB ABC-type multidru 100.0 2.1E-61 4.6E-66 613.0 67.5 528 277-830 13-560 (567)
66 COG4988 CydD ABC-type transpor 100.0 2.1E-61 4.6E-66 570.2 62.1 524 284-830 5-551 (559)
67 TIGR02857 CydD thiol reductant 100.0 3.1E-61 6.8E-66 607.4 67.0 507 278-806 2-529 (529)
68 TIGR02633 xylG D-xylose ABC tr 100.0 1.8E-63 3.9E-68 622.7 45.2 447 606-1442 2-490 (500)
69 PRK15439 autoinducer 2 ABC tra 100.0 2.1E-63 4.6E-68 621.3 44.1 448 604-1442 10-490 (510)
70 PLN03232 ABC transporter C fam 100.0 1.4E-61 3.1E-66 664.6 65.5 534 886-1442 289-826 (1495)
71 TIGR01192 chvA glucan exporter 100.0 2.8E-60 6E-65 602.3 70.9 533 273-829 13-565 (585)
72 TIGR01257 rim_protein retinal- 100.0 3.4E-61 7.5E-66 648.0 66.1 217 1220-1442 1935-2157(2272)
73 PRK11288 araG L-arabinose tran 100.0 4.2E-63 9.2E-68 618.4 44.2 438 605-1443 4-484 (501)
74 PLN03130 ABC transporter C fam 100.0 3.1E-61 6.7E-66 660.3 65.9 456 964-1442 366-826 (1622)
75 PRK15064 ABC transporter ATP-b 100.0 8.8E-62 1.9E-66 610.7 52.5 198 1221-1441 318-522 (530)
76 PRK10522 multidrug transporter 100.0 1.6E-60 3.4E-65 601.6 63.2 462 953-1438 62-532 (547)
77 PRK10982 galactose/methyl gala 100.0 1.9E-62 4.2E-67 611.5 45.2 434 609-1442 2-478 (491)
78 PRK10938 putative molybdenum t 100.0 5.6E-62 1.2E-66 607.7 41.0 444 605-1438 3-486 (490)
79 PRK11819 putative ABC transpor 100.0 3E-60 6.4E-65 598.5 52.2 195 1221-1439 323-528 (556)
80 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 6.5E-60 1.4E-64 595.5 52.5 469 605-1436 4-522 (552)
81 TIGR00957 MRP_assoc_pro multi 100.0 1.6E-58 3.5E-63 635.4 68.1 545 268-828 953-1514(1522)
82 KOG0057 Mitochondrial Fe/S clu 100.0 1.5E-58 3.3E-63 535.4 55.6 512 290-825 41-577 (591)
83 COG4172 ABC-type uncharacteriz 100.0 2.4E-60 5.2E-65 528.0 37.9 448 604-1441 5-513 (534)
84 PRK10636 putative ABC transpor 100.0 1.1E-58 2.4E-63 589.9 52.0 195 1221-1439 311-512 (638)
85 PLN03140 ABC transporter G fam 100.0 1.1E-57 2.3E-62 616.2 62.3 212 1222-1441 867-1107(1470)
86 KOG0054 Multidrug resistance-a 100.0 4.6E-57 1E-61 584.4 60.8 535 887-1442 190-729 (1381)
87 COG4987 CydC ABC-type transpor 100.0 1.9E-56 4.1E-61 518.0 58.9 539 269-829 7-568 (573)
88 PTZ00243 ABC transporter; Prov 100.0 3.2E-56 7E-61 610.4 68.6 474 349-828 1028-1540(1560)
89 PRK11147 ABC transporter ATPas 100.0 3.5E-57 7.6E-62 577.9 51.1 191 1222-1436 319-519 (635)
90 COG4618 ArpD ABC-type protease 100.0 1.4E-56 3.1E-61 513.4 48.0 478 945-1441 69-557 (580)
91 TIGR01194 cyc_pep_trnsptr cycl 100.0 4.3E-55 9.2E-60 552.1 62.4 519 273-814 11-551 (555)
92 KOG0056 Heavy metal exporter H 100.0 4.4E-57 9.5E-62 508.2 38.5 515 286-824 222-763 (790)
93 PLN03073 ABC transporter F fam 100.0 4.9E-56 1.1E-60 565.7 50.7 197 1221-1440 507-710 (718)
94 TIGR00954 3a01203 Peroxysomal 100.0 7.1E-55 1.5E-59 556.9 56.4 514 900-1430 97-653 (659)
95 TIGR01271 CFTR_protein cystic 100.0 1.4E-53 2.9E-58 584.8 68.2 483 339-830 945-1448(1490)
96 PRK13409 putative ATPase RIL; 100.0 6.8E-56 1.5E-60 555.6 39.4 195 1222-1442 340-540 (590)
97 PRK10522 multidrug transporter 100.0 1.4E-52 3.1E-57 529.3 62.9 508 269-814 3-530 (547)
98 COG0488 Uup ATPase components 100.0 1.1E-53 2.4E-58 520.4 46.4 477 605-1439 3-520 (530)
99 COG1129 MglA ABC-type sugar tr 100.0 4.5E-53 9.7E-58 500.0 41.3 437 604-1440 7-486 (500)
100 TIGR00954 3a01203 Peroxysomal 100.0 7.3E-50 1.6E-54 510.8 60.6 516 280-808 97-653 (659)
101 COG5265 ATM1 ABC-type transpor 100.0 1.6E-50 3.4E-55 453.9 36.6 464 347-829 10-493 (497)
102 COG3845 ABC-type uncharacteriz 100.0 1.8E-50 3.8E-55 466.1 37.8 443 604-1442 3-490 (501)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 6.7E-51 1.5E-55 465.3 23.9 221 1221-1442 1-223 (275)
104 PRK14257 phosphate ABC transpo 100.0 5.9E-49 1.3E-53 460.8 24.6 224 1214-1442 72-311 (329)
105 COG1126 GlnQ ABC-type polar am 100.0 3.1E-45 6.7E-50 381.2 20.8 214 1222-1442 2-223 (240)
106 COG1135 AbcC ABC-type metal io 100.0 6.8E-45 1.5E-49 397.3 19.2 214 1223-1441 2-228 (339)
107 COG1117 PstB ABC-type phosphat 100.0 8.9E-45 1.9E-49 375.2 17.8 214 1221-1441 6-234 (253)
108 PRK14257 phosphate ABC transpo 100.0 1.4E-43 3.1E-48 415.4 23.6 262 528-822 23-313 (329)
109 KOG0927 Predicted transporter 100.0 7.4E-43 1.6E-47 403.0 27.0 193 1222-1436 389-587 (614)
110 cd03244 ABCC_MRP_domain2 Domai 100.0 1E-42 2.2E-47 389.4 26.6 219 1221-1439 1-221 (221)
111 cd03288 ABCC_SUR2 The SUR doma 100.0 1.1E-42 2.3E-47 397.4 25.7 223 1219-1441 16-240 (257)
112 cd03369 ABCC_NFT1 Domain 2 of 100.0 5.6E-42 1.2E-46 379.2 25.5 207 1217-1439 1-207 (207)
113 cd03252 ABCC_Hemolysin The ABC 100.0 4.1E-42 8.9E-47 388.6 24.7 219 1223-1441 1-222 (237)
114 COG1125 OpuBA ABC-type proline 100.0 1.5E-42 3.3E-47 367.0 18.7 213 1223-1442 2-223 (309)
115 COG1126 GlnQ ABC-type polar am 100.0 4.8E-42 1E-46 357.4 18.7 200 605-822 2-225 (240)
116 KOG0065 Pleiotropic drug resis 100.0 1.2E-40 2.6E-45 420.1 33.6 201 1235-1443 802-1020(1391)
117 PRK13631 cbiO cobalt transport 100.0 1.8E-41 4E-46 396.5 24.4 218 1219-1441 18-262 (320)
118 COG1120 FepC ABC-type cobalami 100.0 2.1E-41 4.6E-46 372.9 21.0 210 1222-1442 2-226 (258)
119 cd03251 ABCC_MsbA MsbA is an e 100.0 5.2E-41 1.1E-45 379.0 24.2 219 1223-1441 1-222 (234)
120 TIGR02314 ABC_MetN D-methionin 100.0 3.5E-41 7.7E-46 395.4 22.6 210 1223-1441 2-227 (343)
121 cd03254 ABCC_Glucan_exporter_l 100.0 8.1E-41 1.8E-45 376.1 24.4 220 1221-1441 1-223 (229)
122 cd03245 ABCC_bacteriocin_expor 100.0 1.5E-40 3.3E-45 371.5 25.7 217 1221-1437 1-220 (220)
123 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.1E-40 2.5E-45 364.9 22.0 206 1222-1442 4-225 (254)
124 cd03260 ABC_PstB_phosphate_tra 100.0 1.1E-40 2.4E-45 374.4 22.3 209 1223-1442 1-227 (227)
125 cd03253 ABCC_ATM1_transporter 100.0 2.4E-40 5.1E-45 374.1 24.5 218 1223-1441 1-221 (236)
126 COG1124 DppF ABC-type dipeptid 100.0 8.4E-41 1.8E-45 356.0 18.9 212 1222-1441 3-228 (252)
127 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.4E-40 5.1E-45 374.5 23.6 219 1223-1441 1-223 (238)
128 COG1136 SalX ABC-type antimicr 100.0 2.7E-40 5.8E-45 357.3 22.4 208 1223-1435 2-222 (226)
129 KOG0062 ATPase component of AB 100.0 2.9E-40 6.3E-45 379.6 22.9 193 1220-1435 360-559 (582)
130 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.4E-40 7.3E-45 377.3 23.1 219 605-830 2-233 (275)
131 cd03261 ABC_Org_Solvent_Resist 100.0 3.5E-40 7.5E-45 372.3 22.6 213 1223-1442 1-224 (235)
132 COG1122 CbiO ABC-type cobalt t 100.0 2.5E-40 5.5E-45 365.5 20.6 211 1222-1442 3-226 (235)
133 COG4178 ABC-type uncharacteriz 100.0 4.8E-37 1E-41 370.4 50.5 493 913-1430 57-588 (604)
134 COG3839 MalK ABC-type sugar tr 100.0 3.6E-40 7.8E-45 376.7 22.2 212 1222-1442 3-221 (338)
135 COG1135 AbcC ABC-type metal io 100.0 1.7E-40 3.6E-45 362.9 18.6 205 606-822 2-231 (339)
136 COG3638 ABC-type phosphate/pho 100.0 2.6E-40 5.6E-45 348.9 19.0 212 1222-1443 3-236 (258)
137 cd03263 ABC_subfamily_A The AB 100.0 3.9E-40 8.4E-45 368.3 21.2 214 1223-1442 1-219 (220)
138 cd03248 ABCC_TAP TAP, the Tran 100.0 8.9E-40 1.9E-44 366.8 24.0 215 1219-1433 8-226 (226)
139 COG4615 PvdE ABC-type sideroph 100.0 2.7E-37 5.9E-42 342.8 43.0 469 945-1437 54-530 (546)
140 PRK14269 phosphate ABC transpo 100.0 3.9E-40 8.4E-45 374.3 21.0 213 1222-1441 2-227 (246)
141 COG1116 TauB ABC-type nitrate/ 100.0 3.8E-40 8.2E-45 355.1 19.4 191 605-812 3-212 (248)
142 PRK13637 cbiO cobalt transport 100.0 8.1E-40 1.8E-44 378.9 23.1 214 1223-1441 3-231 (287)
143 PRK13650 cbiO cobalt transport 100.0 8.8E-40 1.9E-44 377.3 23.3 211 1222-1441 4-226 (279)
144 PRK11153 metN DL-methionine tr 100.0 8.9E-40 1.9E-44 386.7 23.5 215 1223-1442 2-228 (343)
145 COG2884 FtsE Predicted ATPase 100.0 7.3E-40 1.6E-44 333.0 19.4 208 1223-1440 2-222 (223)
146 PRK14250 phosphate ABC transpo 100.0 9.7E-40 2.1E-44 369.7 22.7 210 1222-1442 3-219 (241)
147 PRK11629 lolD lipoprotein tran 100.0 2.4E-39 5.2E-44 364.9 25.3 213 1222-1439 5-229 (233)
148 COG1127 Ttg2A ABC-type transpo 100.0 7.2E-40 1.6E-44 346.4 19.1 215 1221-1442 7-233 (263)
149 PRK13647 cbiO cobalt transport 100.0 1.4E-39 3.1E-44 374.6 22.8 211 1222-1442 4-225 (274)
150 PRK10744 pstB phosphate transp 100.0 1.4E-39 3E-44 372.7 22.4 215 1220-1441 11-241 (260)
151 cd03219 ABC_Mj1267_LivG_branch 100.0 8E-40 1.7E-44 369.8 20.3 218 1223-1442 1-230 (236)
152 cd03256 ABC_PhnC_transporter A 100.0 1.1E-39 2.3E-44 370.0 21.0 213 1223-1442 1-232 (241)
153 PRK13646 cbiO cobalt transport 100.0 1.7E-39 3.7E-44 376.3 22.9 215 1222-1441 2-232 (286)
154 TIGR00960 3a0501s02 Type II (G 100.0 1.4E-39 3.1E-44 362.5 21.5 202 1223-1433 2-216 (216)
155 cd03224 ABC_TM1139_LivF_branch 100.0 1.1E-39 2.5E-44 365.1 20.2 212 1223-1441 1-218 (222)
156 cd03259 ABC_Carb_Solutes_like 100.0 1.2E-39 2.7E-44 362.2 20.3 206 1223-1437 1-213 (213)
157 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.1E-39 2.4E-44 364.1 20.0 206 1223-1433 1-218 (218)
158 TIGR02315 ABC_phnC phosphonate 100.0 2E-39 4.4E-44 368.1 22.3 213 1223-1442 2-233 (243)
159 cd03247 ABCC_cytochrome_bd The 100.0 2.3E-39 4.9E-44 349.4 21.3 178 1223-1437 1-178 (178)
160 PRK13643 cbiO cobalt transport 100.0 2.4E-39 5.2E-44 375.1 23.1 215 1223-1442 2-231 (288)
161 cd03296 ABC_CysA_sulfate_impor 100.0 2.5E-39 5.5E-44 366.1 22.6 211 1223-1442 3-224 (239)
162 cd03266 ABC_NatA_sodium_export 100.0 2E-39 4.3E-44 362.0 21.3 209 1223-1437 2-218 (218)
163 cd03250 ABCC_MRP_domain1 Domai 100.0 4.1E-39 8.8E-44 355.5 23.4 197 1223-1432 1-204 (204)
164 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.5E-39 3.2E-44 368.7 20.2 213 1223-1441 1-222 (242)
165 PRK13632 cbiO cobalt transport 100.0 3.4E-39 7.3E-44 371.4 23.4 215 1222-1441 7-228 (271)
166 PRK14242 phosphate transporter 100.0 2.1E-39 4.6E-44 370.1 21.2 214 1222-1442 6-235 (253)
167 TIGR02211 LolD_lipo_ex lipopro 100.0 3.1E-39 6.8E-44 361.2 22.1 207 1223-1434 2-220 (221)
168 PRK14273 phosphate ABC transpo 100.0 2.3E-39 5.1E-44 369.8 21.5 215 1221-1442 6-236 (254)
169 PRK13635 cbiO cobalt transport 100.0 3.5E-39 7.6E-44 372.0 23.1 211 1222-1441 5-226 (279)
170 PRK14259 phosphate ABC transpo 100.0 3.2E-39 6.9E-44 370.9 22.7 217 1219-1442 10-251 (269)
171 PRK13636 cbiO cobalt transport 100.0 4.1E-39 8.8E-44 372.6 23.6 215 1222-1442 5-229 (283)
172 cd03258 ABC_MetN_methionine_tr 100.0 1.7E-39 3.6E-44 366.4 19.6 215 1223-1442 2-228 (233)
173 TIGR00972 3a0107s01c2 phosphat 100.0 3E-39 6.4E-44 367.4 21.4 212 1223-1441 2-229 (247)
174 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.5E-39 5.4E-44 365.4 20.6 211 1223-1441 2-218 (236)
175 PRK11432 fbpC ferric transport 100.0 3.9E-39 8.5E-44 380.3 23.1 209 1221-1442 5-224 (351)
176 PRK11650 ugpC glycerol-3-phosp 100.0 3.5E-39 7.6E-44 381.9 22.5 209 1222-1442 3-222 (356)
177 COG1125 OpuBA ABC-type proline 100.0 1.6E-39 3.5E-44 344.1 17.4 202 606-823 2-226 (309)
178 cd03264 ABC_drug_resistance_li 100.0 5.2E-39 1.1E-43 356.7 22.1 202 1223-1437 1-211 (211)
179 PRK13537 nodulation ABC transp 100.0 3.1E-39 6.8E-44 376.5 21.4 214 1221-1442 6-225 (306)
180 TIGR03265 PhnT2 putative 2-ami 100.0 5E-39 1.1E-43 380.2 23.2 212 1222-1442 4-222 (353)
181 PRK13634 cbiO cobalt transport 100.0 4.5E-39 9.7E-44 373.3 22.3 214 1223-1441 3-232 (290)
182 COG1116 TauB ABC-type nitrate/ 100.0 5.2E-39 1.1E-43 346.4 21.0 196 1222-1433 3-211 (248)
183 cd03225 ABC_cobalt_CbiO_domain 100.0 4.7E-39 1E-43 357.2 21.3 204 1224-1432 1-211 (211)
184 PRK14267 phosphate ABC transpo 100.0 3.6E-39 7.8E-44 368.2 20.2 213 1222-1441 4-234 (253)
185 PRK13651 cobalt transporter AT 100.0 9.2E-39 2E-43 371.6 23.6 216 1222-1442 2-252 (305)
186 cd03226 ABC_cobalt_CbiO_domain 100.0 8.7E-39 1.9E-43 353.2 22.2 198 1224-1434 1-205 (205)
187 TIGR03411 urea_trans_UrtD urea 100.0 7.3E-39 1.6E-43 363.3 22.1 218 1222-1442 2-229 (242)
188 cd03257 ABC_NikE_OppD_transpor 100.0 6.8E-39 1.5E-43 360.4 21.7 211 1223-1437 2-228 (228)
189 cd03218 ABC_YhbG The ABC trans 100.0 3.9E-39 8.4E-44 363.2 19.7 213 1223-1442 1-220 (232)
190 PRK13642 cbiO cobalt transport 100.0 8.6E-39 1.9E-43 369.0 23.0 211 1222-1441 4-226 (277)
191 PRK14247 phosphate ABC transpo 100.0 5.9E-39 1.3E-43 365.7 21.2 213 1222-1441 3-231 (250)
192 TIGR01186 proV glycine betaine 100.0 3.6E-39 7.7E-44 380.3 19.9 201 1237-1442 6-217 (363)
193 cd03268 ABC_BcrA_bacitracin_re 100.0 7.6E-39 1.7E-43 354.5 21.4 202 1223-1437 1-208 (208)
194 PRK14235 phosphate transporter 100.0 7.5E-39 1.6E-43 367.7 21.9 216 1219-1441 16-248 (267)
195 PRK10851 sulfate/thiosulfate t 100.0 1.2E-38 2.7E-43 376.8 24.2 212 1222-1442 2-224 (353)
196 cd03291 ABCC_CFTR1 The CFTR su 100.0 2.4E-38 5.3E-43 363.3 25.9 205 1220-1441 37-244 (282)
197 PRK14237 phosphate transporter 100.0 9.4E-39 2E-43 366.9 22.4 215 1221-1442 19-249 (267)
198 cd03265 ABC_DrrA DrrA is the A 100.0 7.2E-39 1.6E-43 357.9 20.9 208 1223-1442 1-219 (220)
199 PRK13640 cbiO cobalt transport 100.0 1E-38 2.2E-43 369.0 22.8 212 1221-1441 4-229 (282)
200 cd03301 ABC_MalK_N The N-termi 100.0 8.3E-39 1.8E-43 355.7 21.0 206 1223-1437 1-213 (213)
201 PRK09493 glnQ glutamine ABC tr 100.0 1.3E-38 2.9E-43 360.6 23.0 212 1223-1441 2-222 (240)
202 cd03293 ABC_NrtD_SsuB_transpor 100.0 6.9E-39 1.5E-43 358.0 20.4 207 1223-1439 1-218 (220)
203 PRK13648 cbiO cobalt transport 100.0 1.3E-38 2.7E-43 366.4 23.0 216 1222-1442 7-229 (269)
204 TIGR03410 urea_trans_UrtE urea 100.0 6.2E-39 1.3E-43 361.0 19.9 210 1223-1442 1-219 (230)
205 PRK13649 cbiO cobalt transport 100.0 9.8E-39 2.1E-43 369.7 22.1 214 1223-1441 3-231 (280)
206 cd03292 ABC_FtsE_transporter F 100.0 8.8E-39 1.9E-43 355.8 20.6 201 1223-1433 1-214 (214)
207 PRK14251 phosphate ABC transpo 100.0 6.3E-39 1.4E-43 365.7 19.9 213 1222-1441 4-232 (251)
208 PRK13645 cbiO cobalt transport 100.0 1E-38 2.2E-43 370.8 21.8 217 1220-1441 4-237 (289)
209 cd03246 ABCC_Protease_Secretio 100.0 1.6E-38 3.5E-43 341.0 21.5 172 1223-1433 1-173 (173)
210 COG1120 FepC ABC-type cobalami 100.0 8.4E-39 1.8E-43 352.4 19.6 201 605-822 2-228 (258)
211 PRK10619 histidine/lysine/argi 100.0 2.6E-38 5.7E-43 361.7 24.5 216 1220-1442 3-239 (257)
212 PRK14245 phosphate ABC transpo 100.0 8.2E-39 1.8E-43 364.4 20.2 214 1222-1442 3-232 (250)
213 PRK14240 phosphate transporter 100.0 1.1E-38 2.3E-43 363.7 21.2 214 1221-1441 2-231 (250)
214 PRK11264 putative amino-acid A 100.0 2E-38 4.3E-43 361.5 23.3 213 1222-1441 3-230 (250)
215 COG3840 ThiQ ABC-type thiamine 100.0 1E-38 2.2E-43 321.4 18.2 205 1223-1442 2-217 (231)
216 TIGR03258 PhnT 2-aminoethylpho 100.0 9.5E-39 2E-43 378.1 21.0 214 1220-1442 3-226 (362)
217 TIGR03005 ectoine_ehuA ectoine 100.0 1.9E-38 4.2E-43 361.8 22.8 213 1223-1442 1-234 (252)
218 PRK13644 cbiO cobalt transport 100.0 1.7E-38 3.6E-43 365.8 22.5 213 1223-1441 2-221 (274)
219 PRK14268 phosphate ABC transpo 100.0 9.3E-39 2E-43 365.4 20.2 215 1221-1442 11-240 (258)
220 PRK14239 phosphate transporter 100.0 1.1E-38 2.3E-43 364.2 20.4 213 1222-1441 5-233 (252)
221 PRK11247 ssuB aliphatic sulfon 100.0 3.8E-38 8.1E-43 358.2 24.7 204 1221-1440 11-219 (257)
222 PRK14256 phosphate ABC transpo 100.0 1.6E-38 3.5E-43 362.4 21.8 216 1220-1442 2-234 (252)
223 PRK14248 phosphate ABC transpo 100.0 1.4E-38 3E-43 366.0 21.4 213 1222-1441 21-249 (268)
224 PRK11124 artP arginine transpo 100.0 2.8E-38 6.1E-43 358.4 23.4 213 1223-1442 3-228 (242)
225 COG1117 PstB ABC-type phosphat 100.0 5.3E-39 1.2E-43 332.5 15.7 204 603-821 5-236 (253)
226 PRK15079 oligopeptide ABC tran 100.0 9.6E-39 2.1E-43 374.9 20.1 215 1222-1441 8-248 (331)
227 PRK10895 lipopolysaccharide AB 100.0 1.8E-38 3.9E-43 359.7 21.6 213 1222-1441 3-223 (241)
228 PRK14244 phosphate ABC transpo 100.0 8.2E-39 1.8E-43 364.7 18.8 212 1223-1441 6-234 (251)
229 PRK09536 btuD corrinoid ABC tr 100.0 2E-38 4.3E-43 378.4 22.9 209 1222-1441 3-225 (402)
230 PRK13652 cbiO cobalt transport 100.0 2.3E-38 4.9E-43 365.4 22.7 211 1222-1442 3-225 (277)
231 PRK14270 phosphate ABC transpo 100.0 1.7E-38 3.8E-43 362.0 21.5 214 1222-1442 4-233 (251)
232 COG3842 PotA ABC-type spermidi 100.0 8.1E-39 1.8E-43 367.5 18.7 209 1221-1442 4-224 (352)
233 PRK14238 phosphate transporter 100.0 2.7E-38 5.8E-43 363.7 23.0 216 1220-1442 22-253 (271)
234 PRK14274 phosphate ABC transpo 100.0 2E-38 4.3E-43 363.1 21.8 213 1222-1441 12-240 (259)
235 PRK11614 livF leucine/isoleuci 100.0 2E-38 4.4E-43 358.4 21.5 214 1222-1442 5-224 (237)
236 PRK14236 phosphate transporter 100.0 2.6E-38 5.5E-43 364.3 22.7 217 1219-1442 22-254 (272)
237 PRK14249 phosphate ABC transpo 100.0 2.3E-38 5E-43 361.0 22.0 214 1222-1442 4-233 (251)
238 cd03269 ABC_putative_ATPase Th 100.0 1.2E-38 2.6E-43 353.6 19.1 204 1223-1437 1-210 (210)
239 cd03290 ABCC_SUR1_N The SUR do 100.0 4.2E-38 9E-43 351.2 23.5 208 1224-1432 2-218 (218)
240 PRK09452 potA putrescine/sperm 100.0 2.9E-38 6.2E-43 375.3 23.5 213 1221-1442 13-232 (375)
241 PRK11000 maltose/maltodextrin 100.0 2E-38 4.2E-43 378.2 22.1 212 1222-1442 3-221 (369)
242 PRK10575 iron-hydroxamate tran 100.0 2.1E-38 4.5E-43 363.8 21.3 209 1222-1441 11-234 (265)
243 PRK10908 cell division protein 100.0 5.9E-38 1.3E-42 351.0 24.5 206 1223-1434 2-216 (222)
244 cd03298 ABC_ThiQ_thiamine_tran 100.0 3.8E-38 8.1E-43 349.8 22.7 200 1223-1437 1-211 (211)
245 cd03250 ABCC_MRP_domain1 Domai 100.0 4.2E-38 9.2E-43 347.4 22.9 204 606-810 1-204 (204)
246 PRK11231 fecE iron-dicitrate t 100.0 2.4E-38 5.3E-43 361.5 21.7 209 1223-1442 3-225 (255)
247 PRK13641 cbiO cobalt transport 100.0 3E-38 6.5E-43 366.1 22.7 215 1222-1441 2-231 (287)
248 PRK14262 phosphate ABC transpo 100.0 1.6E-38 3.5E-43 362.2 20.1 213 1222-1441 3-231 (250)
249 COG3839 MalK ABC-type sugar tr 100.0 1.9E-38 4.2E-43 362.5 20.6 202 605-823 3-224 (338)
250 TIGR02673 FtsE cell division A 100.0 2E-38 4.3E-43 352.9 20.3 200 1223-1432 2-214 (214)
251 PRK11831 putative ABC transpor 100.0 1.6E-38 3.5E-43 365.4 20.0 213 1222-1441 7-230 (269)
252 PRK13633 cobalt transporter AT 100.0 3.2E-38 6.9E-43 364.8 22.5 212 1222-1442 4-231 (280)
253 PRK10584 putative ABC transpor 100.0 3.9E-38 8.5E-43 354.0 22.7 206 1222-1436 6-227 (228)
254 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 4.5E-38 9.7E-43 344.5 22.3 200 604-822 3-227 (254)
255 TIGR01288 nodI ATP-binding ABC 100.0 3.2E-38 7E-43 368.7 22.7 213 1222-1442 4-222 (303)
256 PRK11308 dppF dipeptide transp 100.0 5.2E-38 1.1E-42 368.5 24.2 215 1222-1441 5-241 (327)
257 TIGR03522 GldA_ABC_ATP gliding 100.0 2.9E-38 6.3E-43 368.4 21.8 212 1223-1442 3-219 (301)
258 PRK14252 phosphate ABC transpo 100.0 3.6E-38 7.9E-43 362.0 22.2 219 1217-1442 11-247 (265)
259 COG3840 ThiQ ABC-type thiamine 100.0 1.8E-38 4E-43 319.6 17.1 199 606-823 2-220 (231)
260 PRK14260 phosphate ABC transpo 100.0 2.5E-38 5.3E-43 362.1 20.5 215 1221-1442 6-241 (259)
261 cd03235 ABC_Metallic_Cations A 100.0 2.3E-38 5E-43 352.1 19.7 197 1224-1437 1-213 (213)
262 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.4E-38 5.2E-43 363.6 20.4 207 1224-1441 26-247 (269)
263 PRK14261 phosphate ABC transpo 100.0 2.8E-38 6.1E-43 360.7 20.8 213 1222-1441 6-234 (253)
264 PRK10247 putative ABC transpor 100.0 4E-38 8.8E-43 352.6 21.7 208 1222-1440 7-223 (225)
265 cd03262 ABC_HisP_GlnQ_permease 100.0 5.2E-38 1.1E-42 349.4 22.4 204 1223-1433 1-213 (213)
266 TIGR02769 nickel_nikE nickel i 100.0 4.5E-38 9.7E-43 361.1 22.5 216 1222-1442 2-238 (265)
267 TIGR00968 3a0106s01 sulfate AB 100.0 3.5E-38 7.7E-43 356.0 21.3 211 1223-1442 1-218 (237)
268 PRK14254 phosphate ABC transpo 100.0 4.4E-38 9.6E-43 363.8 22.5 214 1221-1441 38-266 (285)
269 PRK10253 iron-enterobactin tra 100.0 3.4E-38 7.3E-43 362.1 21.2 211 1221-1442 6-231 (265)
270 PRK13639 cbiO cobalt transport 100.0 5E-38 1.1E-42 362.2 22.6 210 1223-1442 2-224 (275)
271 PRK14266 phosphate ABC transpo 100.0 3.4E-38 7.4E-43 359.5 20.8 214 1222-1442 3-232 (250)
272 PRK14243 phosphate transporter 100.0 4.6E-38 9.9E-43 360.6 22.0 214 1222-1442 10-246 (264)
273 PRK13536 nodulation factor exp 100.0 3.7E-38 8E-43 370.9 21.7 213 1222-1442 41-259 (340)
274 PRK11022 dppD dipeptide transp 100.0 2.5E-38 5.5E-43 371.4 20.1 214 1222-1441 3-240 (326)
275 PRK11300 livG leucine/isoleuci 100.0 6.1E-38 1.3E-42 358.6 22.7 216 1222-1441 5-240 (255)
276 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.9E-37 4E-42 356.0 26.7 213 601-822 35-247 (282)
277 PRK14271 phosphate ABC transpo 100.0 1.3E-37 2.9E-42 358.4 25.5 214 1222-1442 21-249 (276)
278 PRK13638 cbiO cobalt transport 100.0 4.8E-38 1E-42 362.0 21.7 208 1223-1441 2-222 (271)
279 PRK14253 phosphate ABC transpo 100.0 4.5E-38 9.7E-43 358.3 21.2 213 1222-1441 3-230 (249)
280 PRK14264 phosphate ABC transpo 100.0 6E-38 1.3E-42 366.2 22.5 215 1220-1441 43-286 (305)
281 COG1127 Ttg2A ABC-type transpo 100.0 4.2E-38 9.1E-43 333.1 18.9 204 603-824 6-237 (263)
282 PRK11607 potG putrescine trans 100.0 7.7E-38 1.7E-42 372.3 23.6 213 1221-1442 18-237 (377)
283 PRK14241 phosphate transporter 100.0 4.6E-38 9.9E-43 359.9 20.8 214 1222-1442 4-240 (258)
284 COG1136 SalX ABC-type antimicr 100.0 8E-38 1.7E-42 338.1 21.5 195 606-812 2-221 (226)
285 PRK13548 hmuV hemin importer A 100.0 1.1E-37 2.4E-42 356.1 23.4 209 1222-1441 2-227 (258)
286 PRK09473 oppD oligopeptide tra 100.0 8.9E-38 1.9E-42 367.0 22.9 212 1222-1442 12-249 (330)
287 TIGR03873 F420-0_ABC_ATP propo 100.0 8.1E-38 1.7E-42 357.4 21.7 209 1223-1442 2-224 (256)
288 PRK14265 phosphate ABC transpo 100.0 1E-37 2.2E-42 359.3 22.4 215 1221-1442 19-256 (274)
289 PRK11701 phnK phosphonate C-P 100.0 1.7E-37 3.6E-42 355.2 23.5 214 1222-1442 6-239 (258)
290 PRK14255 phosphate ABC transpo 100.0 8.5E-38 1.8E-42 356.7 20.8 213 1222-1441 5-233 (252)
291 cd03300 ABC_PotA_N PotA is an 100.0 7.8E-38 1.7E-42 352.2 20.1 210 1223-1441 1-217 (232)
292 PRK10070 glycine betaine trans 100.0 8.9E-38 1.9E-42 372.5 21.7 200 1238-1442 42-252 (400)
293 PRK14263 phosphate ABC transpo 100.0 1E-37 2.2E-42 356.6 21.2 213 1222-1441 8-242 (261)
294 PRK14275 phosphate ABC transpo 100.0 8.6E-38 1.9E-42 361.8 20.8 215 1220-1441 37-267 (286)
295 cd03234 ABCG_White The White s 100.0 8.8E-38 1.9E-42 350.5 20.2 212 1223-1437 4-226 (226)
296 COG1131 CcmA ABC-type multidru 100.0 5.6E-38 1.2E-42 362.3 19.1 210 1222-1442 4-224 (293)
297 cd03252 ABCC_Hemolysin The ABC 100.0 3.1E-37 6.6E-42 348.9 24.4 212 606-823 1-226 (237)
298 PRK13547 hmuV hemin importer A 100.0 1.3E-37 2.9E-42 356.7 21.7 213 1223-1442 2-242 (272)
299 TIGR01277 thiQ thiamine ABC tr 100.0 2E-37 4.3E-42 344.4 22.3 201 1223-1438 1-212 (213)
300 PRK11248 tauB taurine transpor 100.0 1.9E-37 4.1E-42 353.2 22.6 206 1223-1440 2-216 (255)
301 PRK14272 phosphate ABC transpo 100.0 1.1E-37 2.3E-42 355.9 20.5 213 1222-1441 4-233 (252)
302 PRK14258 phosphate ABC transpo 100.0 1.2E-37 2.7E-42 356.6 21.0 215 1221-1442 6-243 (261)
303 COG3842 PotA ABC-type spermidi 100.0 6.1E-38 1.3E-42 360.3 18.5 203 604-823 4-227 (352)
304 PRK10771 thiQ thiamine transpo 100.0 2.8E-37 6.1E-42 347.8 23.3 204 1223-1441 2-216 (232)
305 TIGR01978 sufC FeS assembly AT 100.0 1.1E-37 2.5E-42 353.9 20.1 212 1223-1441 1-231 (243)
306 TIGR02982 heterocyst_DevA ABC 100.0 1.5E-37 3.3E-42 347.0 20.1 206 1223-1433 2-219 (220)
307 TIGR03415 ABC_choXWV_ATP choli 100.0 1.2E-37 2.7E-42 368.6 20.3 200 1238-1442 38-252 (382)
308 cd03299 ABC_ModC_like Archeal 100.0 2.8E-37 6E-42 348.2 22.3 205 1223-1441 1-216 (235)
309 COG1118 CysA ABC-type sulfate/ 100.0 1E-37 2.2E-42 339.9 17.8 200 606-823 3-228 (345)
310 TIGR01188 drrA daunorubicin re 100.0 1.2E-37 2.7E-42 363.6 19.7 200 1231-1442 2-211 (302)
311 PRK15112 antimicrobial peptide 100.0 3.6E-37 7.9E-42 353.7 23.0 212 1222-1442 4-237 (267)
312 PRK15093 antimicrobial peptide 100.0 1.7E-37 3.7E-42 365.7 20.6 214 1222-1441 3-245 (330)
313 cd03254 ABCC_Glucan_exporter_l 100.0 6.8E-37 1.5E-41 344.3 24.2 211 605-822 2-226 (229)
314 PRK14246 phosphate ABC transpo 100.0 4.6E-37 1E-41 350.4 23.0 215 1221-1442 9-239 (257)
315 PRK10419 nikE nickel transport 100.0 3.4E-37 7.4E-42 353.9 21.7 219 1222-1442 3-239 (268)
316 cd03288 ABCC_SUR2 The SUR doma 100.0 1.2E-36 2.5E-41 347.8 25.7 214 603-822 17-243 (257)
317 PRK09984 phosphonate/organopho 100.0 3.6E-37 7.7E-42 353.3 21.2 214 1222-1442 4-240 (262)
318 cd03228 ABCC_MRP_Like The MRP 100.0 5.9E-37 1.3E-41 328.2 21.2 171 1223-1432 1-171 (171)
319 COG1124 DppF ABC-type dipeptid 100.0 4.8E-37 1E-41 327.3 20.1 207 605-823 3-232 (252)
320 COG1122 CbiO ABC-type cobalt t 100.0 4.3E-37 9.3E-42 339.9 20.2 203 605-823 3-229 (235)
321 COG4555 NatA ABC-type Na+ tran 100.0 6.2E-38 1.3E-42 321.3 12.4 213 1223-1442 2-220 (245)
322 cd03244 ABCC_MRP_domain2 Domai 100.0 1.2E-36 2.6E-41 340.4 24.0 206 605-816 2-220 (221)
323 cd03251 ABCC_MsbA MsbA is an e 100.0 1.3E-36 2.8E-41 343.2 24.2 211 607-823 2-226 (234)
324 TIGR03740 galliderm_ABC gallid 100.0 8E-37 1.7E-41 342.1 22.3 204 1223-1441 1-210 (223)
325 COG3638 ABC-type phosphate/pho 100.0 3.4E-37 7.3E-42 325.4 17.7 202 604-821 2-236 (258)
326 cd03229 ABC_Class3 This class 100.0 8.3E-37 1.8E-41 329.3 21.0 172 1223-1432 1-178 (178)
327 COG0410 LivF ABC-type branched 100.0 7.2E-37 1.6E-41 323.9 20.0 216 1222-1443 3-225 (237)
328 cd03230 ABC_DR_subfamily_A Thi 100.0 8.6E-37 1.9E-41 327.6 20.7 170 1223-1433 1-173 (173)
329 COG1118 CysA ABC-type sulfate/ 100.0 2.7E-37 5.8E-42 336.7 16.6 208 1222-1442 2-225 (345)
330 PRK10418 nikD nickel transport 100.0 7.1E-37 1.5E-41 349.1 21.0 210 1222-1442 4-228 (254)
331 cd03297 ABC_ModC_molybdenum_tr 100.0 9.6E-37 2.1E-41 339.2 21.1 204 1223-1437 2-214 (214)
332 cd03253 ABCC_ATM1_transporter 100.0 2.5E-36 5.4E-41 341.3 24.2 209 607-822 2-224 (236)
333 PRK11144 modC molybdate transp 100.0 9.6E-37 2.1E-41 362.2 21.8 206 1223-1442 2-216 (352)
334 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 2.8E-36 6E-41 341.3 24.0 211 607-822 2-226 (238)
335 TIGR01186 proV glycine betaine 100.0 7.1E-37 1.5E-41 360.8 19.8 188 625-823 7-220 (363)
336 cd03233 ABC_PDR_domain1 The pl 100.0 1.5E-36 3.3E-41 333.8 20.7 190 1222-1437 3-202 (202)
337 TIGR02142 modC_ABC molybdenum 100.0 1.4E-36 3E-41 361.5 21.6 207 1227-1442 4-219 (354)
338 cd03213 ABCG_EPDR ABCG transpo 100.0 1.4E-36 3.1E-41 331.9 19.8 182 1222-1437 3-194 (194)
339 TIGR02323 CP_lyasePhnK phospho 100.0 1.2E-36 2.7E-41 347.3 20.2 214 1222-1442 3-236 (253)
340 cd03217 ABC_FeS_Assembly ABC-t 100.0 2E-36 4.3E-41 332.5 21.0 182 1223-1439 1-189 (200)
341 cd03215 ABC_Carb_Monos_II This 100.0 1.4E-36 2.9E-41 328.9 19.4 172 1222-1433 4-182 (182)
342 COG4178 ABC-type uncharacteriz 100.0 3.6E-33 7.7E-38 337.0 50.8 450 338-808 105-588 (604)
343 PRK11650 ugpC glycerol-3-phosp 100.0 2.6E-36 5.6E-41 357.5 23.0 202 605-823 3-225 (356)
344 cd03214 ABC_Iron-Siderophores_ 100.0 1.8E-36 3.9E-41 327.3 19.3 177 1224-1437 1-180 (180)
345 cd03232 ABC_PDR_domain2 The pl 100.0 1.6E-36 3.4E-41 331.2 18.9 181 1222-1437 3-192 (192)
346 PRK13631 cbiO cobalt transport 100.0 3.7E-36 8E-41 351.9 23.1 209 602-822 18-265 (320)
347 cd03245 ABCC_bacteriocin_expor 100.0 6.8E-36 1.5E-40 334.1 24.1 205 605-815 2-220 (220)
348 TIGR02314 ABC_MetN D-methionin 100.0 2.4E-36 5.1E-41 354.7 21.3 203 606-822 2-230 (343)
349 cd03223 ABCD_peroxisomal_ALDP 100.0 3.4E-36 7.3E-41 320.3 20.6 164 1223-1432 1-164 (166)
350 COG4619 ABC-type uncharacteriz 100.0 1.1E-36 2.4E-41 302.4 14.9 198 1231-1436 10-215 (223)
351 TIGR03608 L_ocin_972_ABC putat 100.0 3.2E-36 7E-41 333.2 20.3 193 1225-1428 1-206 (206)
352 PRK15056 manganese/iron transp 100.0 5.6E-36 1.2E-40 344.8 22.9 207 1222-1442 6-228 (272)
353 CHL00131 ycf16 sulfate ABC tra 100.0 5.5E-36 1.2E-40 341.9 22.4 216 1222-1441 7-238 (252)
354 PRK11432 fbpC ferric transport 100.0 7.4E-36 1.6E-40 352.5 23.0 202 604-823 5-227 (351)
355 COG1137 YhbG ABC-type (unclass 100.0 3.8E-37 8.2E-42 315.2 10.3 220 1221-1442 3-226 (243)
356 PRK09544 znuC high-affinity zi 100.0 8.2E-36 1.8E-40 338.4 21.7 198 1222-1442 4-207 (251)
357 COG2884 FtsE Predicted ATPase 100.0 4.7E-36 1E-40 305.3 17.2 193 606-815 2-219 (223)
358 cd03290 ABCC_SUR1_N The SUR do 100.0 1.3E-35 2.8E-40 331.2 22.3 199 607-810 2-218 (218)
359 PRK09580 sufC cysteine desulfu 100.0 8.1E-36 1.8E-40 339.7 21.1 213 1223-1440 2-231 (248)
360 cd03267 ABC_NatA_like Similar 100.0 5.7E-36 1.2E-40 337.6 19.6 195 1237-1437 34-236 (236)
361 TIGR01184 ntrCD nitrate transp 100.0 5.2E-36 1.1E-40 336.6 18.8 192 1240-1441 1-201 (230)
362 cd03261 ABC_Org_Solvent_Resist 100.0 9.4E-36 2E-40 336.2 20.9 198 607-822 2-226 (235)
363 COG4615 PvdE ABC-type sideroph 100.0 4.2E-33 9.1E-38 309.6 41.2 508 269-814 3-529 (546)
364 PRK03695 vitamin B12-transport 100.0 8.4E-36 1.8E-40 338.7 20.4 207 1224-1442 2-220 (248)
365 COG0444 DppD ABC-type dipeptid 100.0 4.7E-36 1E-40 334.3 17.6 214 1223-1442 2-241 (316)
366 PRK09452 potA putrescine/sperm 100.0 1.6E-35 3.4E-40 351.8 23.3 203 603-823 12-235 (375)
367 TIGR03265 PhnT2 putative 2-ami 100.0 1.5E-35 3.2E-40 350.7 21.8 201 605-823 4-225 (353)
368 PRK13643 cbiO cobalt transport 100.0 1.7E-35 3.6E-40 343.1 21.8 205 606-822 2-233 (288)
369 PRK13549 xylose transporter AT 100.0 2E-35 4.4E-40 369.8 24.3 214 1222-1442 5-230 (506)
370 PRK13634 cbiO cobalt transport 100.0 1.9E-35 4.1E-40 342.9 22.2 205 606-822 3-235 (290)
371 PRK13637 cbiO cobalt transport 100.0 2.4E-35 5.1E-40 341.7 22.2 207 605-822 2-234 (287)
372 cd03216 ABC_Carb_Monos_I This 100.0 3.6E-35 7.8E-40 311.5 21.7 159 1223-1435 1-162 (163)
373 PRK13650 cbiO cobalt transport 100.0 2.4E-35 5.2E-40 340.5 21.6 204 605-823 4-230 (279)
374 PRK13646 cbiO cobalt transport 100.0 2.7E-35 5.8E-40 341.2 21.9 206 605-822 2-235 (286)
375 cd03260 ABC_PstB_phosphate_tra 100.0 1.9E-35 4.1E-40 332.0 20.0 197 606-819 1-226 (227)
376 PRK10851 sulfate/thiosulfate t 100.0 3.4E-35 7.4E-40 347.6 23.0 201 605-823 2-227 (353)
377 TIGR03258 PhnT 2-aminoethylpho 100.0 2.6E-35 5.7E-40 348.8 21.4 202 604-823 4-229 (362)
378 PRK13651 cobalt transporter AT 100.0 3.8E-35 8.2E-40 341.4 22.4 206 605-822 2-254 (305)
379 PRK13538 cytochrome c biogenes 100.0 2.4E-35 5.3E-40 325.2 19.7 194 1223-1428 2-202 (204)
380 cd03296 ABC_CysA_sulfate_impor 100.0 4.7E-35 1E-39 331.3 22.5 199 605-821 2-225 (239)
381 PRK15439 autoinducer 2 ABC tra 100.0 5.4E-35 1.2E-39 365.8 25.2 213 1222-1442 11-227 (510)
382 PRK11000 maltose/maltodextrin 100.0 3.4E-35 7.3E-40 350.4 22.1 200 605-822 3-223 (369)
383 cd03369 ABCC_NFT1 Domain 2 of 100.0 7E-35 1.5E-39 322.6 23.0 189 604-816 5-206 (207)
384 PRK10762 D-ribose transporter 100.0 4.6E-35 9.9E-40 366.2 24.2 214 1222-1442 4-228 (501)
385 PRK09700 D-allose transporter 100.0 4.2E-35 9E-40 367.6 23.8 214 1222-1442 5-232 (510)
386 PRK00349 uvrA excinuclease ABC 100.0 1.5E-34 3.2E-39 372.9 29.2 214 1222-1442 614-925 (943)
387 PRK13647 cbiO cobalt transport 100.0 3.9E-35 8.5E-40 337.7 21.0 199 605-820 4-225 (274)
388 PRK14269 phosphate ABC transpo 100.0 5.4E-35 1.2E-39 332.1 21.7 203 605-822 2-230 (246)
389 cd03231 ABC_CcmA_heme_exporter 100.0 6.5E-35 1.4E-39 320.9 21.6 194 1223-1428 1-198 (201)
390 cd03259 ABC_Carb_Solutes_like 100.0 3.4E-35 7.4E-40 326.6 19.5 191 607-815 2-213 (213)
391 cd03248 ABCC_TAP TAP, the Tran 100.0 7.4E-35 1.6E-39 327.0 22.3 205 602-811 8-226 (226)
392 PRK14250 phosphate ABC transpo 100.0 1E-34 2.2E-39 328.7 23.1 201 605-822 3-221 (241)
393 PRK14242 phosphate transporter 100.0 7.7E-35 1.7E-39 332.5 22.1 204 604-822 5-237 (253)
394 cd03219 ABC_Mj1267_LivG_branch 100.0 4.5E-35 9.7E-40 331.1 19.8 198 607-822 2-232 (236)
395 PRK11288 araG L-arabinose tran 100.0 7.2E-35 1.6E-39 364.4 23.6 211 1222-1439 4-224 (501)
396 PRK11607 potG putrescine trans 100.0 8.2E-35 1.8E-39 346.4 22.9 204 603-823 17-240 (377)
397 TIGR02770 nickel_nikD nickel i 100.0 2.6E-35 5.7E-40 331.2 17.5 193 1239-1442 1-213 (230)
398 cd03265 ABC_DrrA DrrA is the A 100.0 5.8E-35 1.3E-39 326.4 19.9 197 606-820 1-219 (220)
399 PRK13540 cytochrome c biogenes 100.0 5.6E-35 1.2E-39 321.3 19.4 193 1223-1427 2-198 (200)
400 TIGR00960 3a0501s02 Type II (G 100.0 4.4E-35 9.5E-40 326.5 18.5 190 606-811 2-216 (216)
401 TIGR00972 3a0107s01c2 phosphat 100.0 9.1E-35 2E-39 330.6 21.5 201 606-821 2-231 (247)
402 PRK14273 phosphate ABC transpo 100.0 1.3E-34 2.9E-39 330.7 22.8 204 604-822 6-238 (254)
403 cd03293 ABC_NrtD_SsuB_transpor 100.0 7.7E-35 1.7E-39 325.4 20.4 197 607-817 2-218 (220)
404 cd03226 ABC_cobalt_CbiO_domain 100.0 6.4E-35 1.4E-39 322.3 19.4 188 608-812 2-205 (205)
405 PRK11153 metN DL-methionine tr 100.0 1E-34 2.3E-39 343.6 22.3 204 606-823 2-231 (343)
406 PRK10982 galactose/methyl gala 100.0 8.4E-35 1.8E-39 363.2 22.7 211 1225-1442 1-221 (491)
407 PRK13635 cbiO cobalt transport 100.0 1.5E-34 3.3E-39 333.5 23.1 202 605-822 5-229 (279)
408 TIGR02315 ABC_phnC phosphonate 100.0 1E-34 2.2E-39 329.6 21.3 198 606-820 2-233 (243)
409 COG0411 LivG ABC-type branched 100.0 2.4E-35 5.3E-40 314.7 15.0 216 1223-1442 5-237 (250)
410 cd03294 ABC_Pro_Gly_Bertaine T 100.0 8.5E-35 1.8E-39 334.3 20.4 186 625-822 38-250 (269)
411 KOG0060 Long-chain acyl-CoA tr 100.0 2.1E-32 4.6E-37 318.7 40.3 336 1082-1431 269-642 (659)
412 COG4175 ProV ABC-type proline/ 100.0 4.4E-35 9.5E-40 318.9 16.9 212 1222-1442 4-252 (386)
413 PRK10744 pstB phosphate transp 100.0 2E-34 4.2E-39 330.2 23.0 206 602-822 10-244 (260)
414 PRK13537 nodulation ABC transp 100.0 1.4E-34 3E-39 337.5 22.0 202 604-823 6-228 (306)
415 PRK13644 cbiO cobalt transport 100.0 1.5E-34 3.2E-39 333.0 21.9 200 606-822 2-224 (274)
416 COG1123 ATPase components of v 100.0 1.4E-34 3E-39 345.1 22.2 211 1222-1441 5-241 (539)
417 cd03268 ABC_BcrA_bacitracin_re 100.0 1.5E-34 3.2E-39 320.3 21.0 192 606-815 1-208 (208)
418 cd03263 ABC_subfamily_A The AB 100.0 1.3E-34 2.8E-39 323.7 20.7 198 606-820 1-219 (220)
419 cd03256 ABC_PhnC_transporter A 100.0 1.3E-34 2.8E-39 328.4 20.8 197 607-820 2-232 (241)
420 PRK11629 lolD lipoprotein tran 100.0 1.7E-34 3.8E-39 325.4 21.6 198 605-816 5-228 (233)
421 TIGR02633 xylG D-xylose ABC tr 100.0 2E-34 4.3E-39 360.9 24.0 213 1223-1442 2-228 (500)
422 PRK13543 cytochrome c biogenes 100.0 2.1E-34 4.6E-39 320.1 21.5 195 1222-1430 11-212 (214)
423 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.1E-34 2.4E-39 323.8 19.2 191 607-811 2-218 (218)
424 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 2.2E-34 4.8E-39 325.1 21.7 199 606-822 2-221 (236)
425 cd03258 ABC_MetN_methionine_tr 100.0 2.1E-34 4.6E-39 324.9 21.2 202 606-821 2-229 (233)
426 PRK11247 ssuB aliphatic sulfon 100.0 3.1E-34 6.8E-39 326.2 22.6 197 604-818 11-219 (257)
427 cd03224 ABC_TM1139_LivF_branch 100.0 1.9E-34 4.1E-39 322.9 20.6 199 606-821 1-220 (222)
428 PRK14235 phosphate transporter 100.0 3E-34 6.6E-39 329.5 22.7 205 602-821 16-250 (267)
429 PRK10535 macrolide transporter 100.0 1.8E-34 4E-39 369.0 23.1 216 1222-1442 4-230 (648)
430 PRK13641 cbiO cobalt transport 100.0 2.7E-34 5.8E-39 333.1 22.2 206 605-822 2-234 (287)
431 cd03301 ABC_MalK_N The N-termi 100.0 1.6E-34 3.4E-39 321.4 19.4 192 606-815 1-213 (213)
432 cd03235 ABC_Metallic_Cations A 100.0 1.7E-34 3.6E-39 321.1 19.4 188 608-814 2-212 (213)
433 PRK13640 cbiO cobalt transport 100.0 3.2E-34 7E-39 331.6 22.4 203 604-822 4-232 (282)
434 PRK14237 phosphate transporter 100.0 3.7E-34 8.1E-39 328.8 22.7 206 602-822 17-251 (267)
435 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.5E-34 5.5E-39 325.9 21.0 200 607-821 2-224 (242)
436 TIGR01288 nodI ATP-binding ABC 100.0 2.9E-34 6.3E-39 335.4 22.0 202 604-823 3-225 (303)
437 PRK09536 btuD corrinoid ABC tr 100.0 2.6E-34 5.5E-39 343.1 21.9 200 605-822 3-228 (402)
438 cd03218 ABC_YhbG The ABC trans 100.0 2.3E-34 4.9E-39 324.5 20.3 197 607-821 2-221 (232)
439 PRK13633 cobalt transporter AT 100.0 4.2E-34 9E-39 330.5 22.9 206 605-822 4-233 (280)
440 cd03264 ABC_drug_resistance_li 100.0 1.8E-34 4E-39 320.3 19.1 190 606-815 1-211 (211)
441 PRK14274 phosphate ABC transpo 100.0 4.6E-34 1E-38 327.0 23.0 204 604-822 11-243 (259)
442 cd03247 ABCC_cytochrome_bd The 100.0 3.1E-34 6.8E-39 309.4 20.4 166 606-815 1-178 (178)
443 PRK10261 glutathione transport 100.0 2.6E-34 5.6E-39 366.5 23.2 215 1222-1441 12-255 (623)
444 PRK14245 phosphate ABC transpo 100.0 2.8E-34 6E-39 327.2 21.0 203 605-822 3-234 (250)
445 PRK13636 cbiO cobalt transport 100.0 3.8E-34 8.3E-39 331.1 22.4 201 605-822 5-231 (283)
446 cd03266 ABC_NatA_sodium_export 100.0 2.6E-34 5.6E-39 320.8 20.2 196 606-815 2-218 (218)
447 PRK13539 cytochrome c biogenes 100.0 3.6E-34 7.7E-39 316.6 21.1 194 1222-1430 2-200 (207)
448 PRK15134 microcin C ABC transp 100.0 1.9E-34 4.2E-39 362.9 21.4 215 1222-1441 5-243 (529)
449 PRK13632 cbiO cobalt transport 100.0 4.2E-34 9.1E-39 329.1 22.2 203 604-822 6-231 (271)
450 PRK14259 phosphate ABC transpo 100.0 5.4E-34 1.2E-38 327.6 23.0 206 602-822 10-253 (269)
451 PRK14248 phosphate ABC transpo 100.0 4.9E-34 1.1E-38 328.4 22.4 205 603-822 19-252 (268)
452 PRK13645 cbiO cobalt transport 100.0 4.1E-34 9E-39 332.3 21.9 207 604-822 5-240 (289)
453 PRK11831 putative ABC transpor 100.0 4.4E-34 9.4E-39 328.6 21.7 201 604-822 6-233 (269)
454 cd03298 ABC_ThiQ_thiamine_tran 100.0 4.1E-34 8.8E-39 317.5 20.8 190 606-815 1-211 (211)
455 PRK13536 nodulation factor exp 100.0 3.7E-34 8.1E-39 337.0 21.5 203 603-823 39-262 (340)
456 PRK10938 putative molybdenum t 100.0 2.5E-34 5.3E-39 359.2 21.2 208 1222-1441 3-221 (490)
457 PRK14251 phosphate ABC transpo 100.0 3.8E-34 8.3E-39 326.4 20.9 202 605-821 4-234 (251)
458 PRK14268 phosphate ABC transpo 100.0 4.8E-34 1E-38 326.6 21.7 204 603-821 10-241 (258)
459 TIGR03415 ABC_choXWV_ATP choli 100.0 2.5E-34 5.5E-39 340.4 20.0 188 625-823 38-255 (382)
460 TIGR02324 CP_lyasePhnL phospho 100.0 3.1E-34 6.7E-39 321.5 19.7 201 1223-1428 2-222 (224)
461 PRK14249 phosphate ABC transpo 100.0 5.9E-34 1.3E-38 324.8 22.3 203 605-822 4-235 (251)
462 PRK13649 cbiO cobalt transport 100.0 4.5E-34 9.7E-39 330.8 21.5 206 605-822 2-234 (280)
463 COG1245 Predicted ATPase, RNas 100.0 2.3E-33 5E-38 317.3 26.4 162 1246-1429 363-530 (591)
464 PRK09493 glnQ glutamine ABC tr 100.0 5.1E-34 1.1E-38 323.1 21.4 199 606-822 2-225 (240)
465 PRK14239 phosphate transporter 100.0 5.5E-34 1.2E-38 325.4 21.8 203 605-822 5-236 (252)
466 TIGR01257 rim_protein retinal- 100.0 3.7E-34 8E-39 387.4 23.8 216 1221-1442 927-1147(2272)
467 PRK14270 phosphate ABC transpo 100.0 5.4E-34 1.2E-38 325.1 21.6 203 605-822 4-235 (251)
468 cd03269 ABC_putative_ATPase Th 100.0 3.6E-34 7.7E-39 317.7 19.6 191 607-815 2-210 (210)
469 TIGR02211 LolD_lipo_ex lipopro 100.0 4.2E-34 9E-39 319.9 20.3 193 606-812 2-220 (221)
470 PRK10575 iron-hydroxamate tran 100.0 7.1E-34 1.5E-38 326.3 22.4 202 602-821 8-236 (265)
471 PRK10619 histidine/lysine/argi 100.0 5.8E-34 1.3E-38 325.8 21.5 202 604-822 4-241 (257)
472 PRK00635 excinuclease ABC subu 100.0 2E-33 4.3E-38 374.6 29.8 208 1222-1442 600-904 (1809)
473 PRK14240 phosphate transporter 100.0 8.3E-34 1.8E-38 323.4 22.5 202 605-821 3-233 (250)
474 TIGR03411 urea_trans_UrtD urea 100.0 6.6E-34 1.4E-38 322.7 21.5 197 606-821 3-230 (242)
475 TIGR00630 uvra excinuclease AB 100.0 4.3E-33 9.3E-38 358.7 31.6 214 1222-1442 612-923 (924)
476 TIGR01189 ccmA heme ABC export 100.0 2.9E-34 6.2E-39 315.3 17.8 192 1223-1427 1-197 (198)
477 PRK10247 putative ABC transpor 100.0 5.5E-34 1.2E-38 319.3 20.4 199 603-818 5-223 (225)
478 PRK13652 cbiO cobalt transport 100.0 9.1E-34 2E-38 327.2 22.7 201 605-822 3-227 (277)
479 PRK13642 cbiO cobalt transport 100.0 7.5E-34 1.6E-38 327.9 22.0 204 605-823 4-230 (277)
480 PRK15079 oligopeptide ABC tran 100.0 8.8E-34 1.9E-38 333.0 22.9 210 603-823 6-252 (331)
481 PRK14236 phosphate transporter 100.0 1E-33 2.2E-38 326.1 22.8 205 602-821 22-255 (272)
482 TIGR03410 urea_trans_UrtE urea 100.0 6.4E-34 1.4E-38 320.3 20.7 197 607-820 2-219 (230)
483 PRK14243 phosphate transporter 100.0 1.3E-33 2.7E-38 323.9 23.3 204 604-822 9-248 (264)
484 PRK10584 putative ABC transpor 100.0 1E-33 2.2E-38 318.2 22.0 197 604-814 5-227 (228)
485 PRK10070 glycine betaine trans 100.0 4.6E-34 1E-38 340.7 20.2 187 626-823 43-255 (400)
486 PLN03211 ABC transporter G-25; 100.0 3.3E-34 7.1E-39 364.4 20.1 197 1237-1442 81-294 (659)
487 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 5.5E-34 1.2E-38 318.8 19.5 197 1223-1437 23-224 (224)
488 TIGR01188 drrA daunorubicin re 100.0 4.5E-34 9.7E-39 333.7 19.6 187 625-823 7-214 (302)
489 PRK13648 cbiO cobalt transport 100.0 9.9E-34 2.1E-38 325.8 22.1 203 604-822 6-231 (269)
490 PRK14247 phosphate ABC transpo 100.0 9.9E-34 2.1E-38 322.8 21.9 203 605-822 3-234 (250)
491 COG4559 ABC-type hemin transpo 100.0 5.1E-34 1.1E-38 294.8 17.5 209 1223-1442 2-228 (259)
492 COG4181 Predicted ABC-type tra 100.0 4.6E-34 1E-38 284.6 16.5 209 1222-1436 6-227 (228)
493 PRK11231 fecE iron-dicitrate t 100.0 1E-33 2.2E-38 323.5 21.7 198 606-821 3-226 (255)
494 TIGR02673 FtsE cell division A 100.0 4.1E-34 8.9E-39 318.3 17.9 188 606-810 2-214 (214)
495 PRK10771 thiQ thiamine transpo 100.0 1.9E-33 4.1E-38 316.7 23.5 197 606-822 2-219 (232)
496 PRK11264 putative amino-acid A 100.0 7.7E-34 1.7E-38 323.8 20.5 199 605-821 3-232 (250)
497 cd03223 ABCD_peroxisomal_ALDP 100.0 9.8E-34 2.1E-38 301.4 19.9 161 606-809 1-163 (166)
498 PRK11124 artP arginine transpo 100.0 1.1E-33 2.4E-38 320.7 21.6 198 605-820 2-228 (242)
499 PRK11300 livG leucine/isoleuci 100.0 1.3E-33 2.8E-38 322.9 22.2 199 605-821 5-242 (255)
500 PRK13548 hmuV hemin importer A 100.0 1.6E-33 3.5E-38 321.8 22.9 199 606-822 3-230 (258)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.9e-258 Score=2448.89 Aligned_cols=1221 Identities=42% Similarity=0.698 Sum_probs=1123.2
Q ss_pred CCCCCCCCh--hHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhH
Q 000522 202 TDSGNNQSY--WDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGY 279 (1445)
Q Consensus 202 ~~~e~~~~~--~sr~~f~Wl~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~ 279 (1445)
+.|.+.++. +|+++|||++|++++|||++|+.+|+|+++++++++.+.++|++.|+++.++++++|+++++++++|+|
T Consensus 122 ~~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~~~~~psl~~al~~~f~~ 201 (1381)
T KOG0054|consen 122 PNPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGRSGKKPSLLRALLRTFGR 201 (1381)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhccccCCcHHHHHHHHHHHH
Confidence 345555555 999999999999999999999999999999999999999999999999874434678999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 280 PYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQG-SGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTII 358 (1445)
Q Consensus 280 ~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~-~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~i 358 (1445)
+++..++++.+.+...|++|.+++.++++++++ .+.+.||+++++++++.++++++.++|+|...++|+|+|+++.++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~I 281 (1381)
T KOG0054|consen 202 TFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAI 281 (1381)
T ss_pred HHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHH
Confidence 999999999999999999999999999999884 6678899999999999999999999999999999999999999999
Q ss_pred HHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHH
Q 000522 359 YQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWI 438 (1445)
Q Consensus 359 y~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~~~~~~~~~~~~ 438 (1445)
|+|+|+++...+++.+.|+++|+|++|++|+.++..++|.+|.+|+|+++++|+||.++|+++++|++++++++|+|.++
T Consensus 282 Y~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~ 361 (1381)
T KOG0054|consen 282 YRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFL 361 (1381)
T ss_pred HHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 439 ANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLF 518 (1445)
Q Consensus 439 ~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (1445)
+++++++|++.|+.+|+|++.|+|+|+|||+||||+||+.|.++|++.|++|++.++|..++.+++.+++.+.|+++.++
T Consensus 362 a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~ 441 (1381)
T KOG0054|consen 362 AKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVV 441 (1381)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHH-HhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcCCCCcccCCCc
Q 000522 519 TFGLFA-LMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLS 597 (1445)
Q Consensus 519 ~f~~~~-~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~~ 597 (1445)
+|++|+ ..++.++++++|+++++|++++.|+..+|+.+..++++.+|++|+++||..+|.++..... .+.
T Consensus 442 tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~--~~~------- 512 (1381)
T KOG0054|consen 442 TFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVER--SPD------- 512 (1381)
T ss_pred HHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCcccccc--CCC-------
Confidence 999999 7788999999999999999999999999999999999999999999999999876632110 011
Q ss_pred cCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcCeEEEE
Q 000522 598 NFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYV 677 (1445)
Q Consensus 598 ~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~ 677 (1445)
...+.+++++|++|+|++.++++ .|+||||+|++|++++|||++||||||||++|+||+++.+|+|.++|.+|||
T Consensus 513 --~~~~~~i~i~~~sfsW~~~~~~~---tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv 587 (1381)
T KOG0054|consen 513 --EAGENAIEIKNGSFSWDSESPEP---TLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYV 587 (1381)
T ss_pred --CCCCceEEEeeeeEecCCCCCcc---cccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEe
Confidence 23556799999999999754434 4999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEE
Q 000522 678 PQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYML 757 (1445)
Q Consensus 678 ~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illl 757 (1445)
||+|||+||||||||+||++||++||++|+++|+|++|++.+|.||+|+|||+|.||||||||||+||||+|+|+|||+|
T Consensus 588 ~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLL 667 (1381)
T KOG0054|consen 588 PQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLL 667 (1381)
T ss_pred ccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHhccccCcccccccchh
Q 000522 758 DDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTS 837 (1445)
Q Consensus 758 De~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~ 837 (1445)
|||+||||+||++|||++|+.| .+++||||+|||+++++++||+|++|+||+|.++|+|+|+++.+..+.++..+.+.+
T Consensus 668 DDplSAVDahvg~~if~~ci~~-~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~~~ 746 (1381)
T KOG0054|consen 668 DDPLSAVDAHVGKHIFEECIRG-LLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEESE 746 (1381)
T ss_pred cCcchhhhHhhhHHHHHHHHHh-hhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccchh
Confidence 9999999999999999999977 889999999999999999999999999999999999999997666555432111111
Q ss_pred hhhh--hhhhhccccc------hhhhhhhhhcccccCCchhhHHHHHHHHhcCccchhhHHHHHhh-hhHHHHHHHHHHH
Q 000522 838 LHMQ--KQEMRTNASS------ANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKF-SGWFITLVICLSA 908 (1445)
Q Consensus 838 ~~~~--~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~-~g~~~~~~~~~~~ 908 (1445)
.... ....+..... ........++......++..+..++|+++.|.++|++|+.|+++ .|+....+++++.
T Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~ 826 (1381)
T KOG0054|consen 747 QEEEASEKDLESGESSRESESRSLESLSSEEEKSKDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLF 826 (1381)
T ss_pred hccccccccccccccccchhhhhhhhhcccccccccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHH
Confidence 1000 0000000000 00000000111111112245566778889999999999999998 5666667677888
Q ss_pred HHHHHHHhhhhhHhhhhhcccCCCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Q 000522 909 ILMQASRNGNDLWLSYWVDTTGSSQTK-YSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPV 987 (1445)
Q Consensus 909 ~~~~~~~~~~~~wl~~w~~~~~~~~~~-~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~ 987 (1445)
+..+++..+.++|+++|++........ .+..+|+++|++++++..++.+++++.+..++.+++++||++|+++++|+||
T Consensus 827 v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm 906 (1381)
T KOG0054|consen 827 VLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPM 906 (1381)
T ss_pred HHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 899999999999999999875332221 4677899999999999999999999999999999999999999999999999
Q ss_pred cccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 988 LFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELR 1067 (1445)
Q Consensus 988 ~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~ 1067 (1445)
+|||+||+|||+||||+|++.+|+.+|..+..++.+++.++++++++++..|+++++++|+.++|++++++|++++||++
T Consensus 907 ~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLk 986 (1381)
T KOG0054|consen 907 SFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELK 986 (1381)
T ss_pred hhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Q 000522 1068 RLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIG 1147 (1445)
Q Consensus 1068 ~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~ 1147 (1445)
|+++.+|||+|+||+|+++|+.|||||+.|++|.+++.+++|.+++++|....++||+++|+|+++++++.++++++++.
T Consensus 987 RLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~ 1066 (1381)
T KOG0054|consen 987 RLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLL 1066 (1381)
T ss_pred HhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888888864
Q ss_pred hcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccc--cccCCCCCCCCCCCccEEE
Q 000522 1148 SRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE--LCGYQSLSPDWPFQGLIEF 1225 (1445)
Q Consensus 1148 ~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~--~~~~~~~~~~wp~~g~I~f 1225 (1445)
.. +..++|.+|++++|++++++.++|++++.+++|+.|+||||+.+|.++|+|. ..+...||++||.+|+|+|
T Consensus 1067 ~~-----~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f 1141 (1381)
T KOG0054|consen 1067 PS-----GLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEF 1141 (1381)
T ss_pred cC-----CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEE
Confidence 22 1146999999999999999999999999999999999999999999998883 1222338899999999999
Q ss_pred EEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcC
Q 000522 1226 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1305 (1445)
Q Consensus 1226 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1305 (1445)
+|++++|+|+.|+|||||||+|+||||||||||||||||||+++|+|+.||.+|+|.|||+||+++++++||+++++|||
T Consensus 1142 ~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQ 1221 (1381)
T KOG0054|consen 1142 EDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQ 1221 (1381)
T ss_pred EEeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEec
Q 000522 1306 SPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDE 1383 (1445)
Q Consensus 1306 dp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDE 1383 (1445)
||+||+||+|+||||+++++|++||+|||+|+|+++++++ |||++|.|+|.|||.||||++||||||||++|||+|||
T Consensus 1222 dPvLFsGTvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDE 1301 (1381)
T KOG0054|consen 1222 DPVLFSGTVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDE 1301 (1381)
T ss_pred CCceecCccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEec
Confidence 9999999999999999999999999999999999999998 99999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1384 CTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1384 aTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||++|++||..||++||++|+|||||+||||++||+|||||+|||+|+|+|+|+|+++
T Consensus 1302 ATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~L 1360 (1381)
T KOG0054|consen 1302 ATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAEL 1360 (1381)
T ss_pred ccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHH
Confidence 99999999999999999999999999999999999999999999999999999999876
No 2
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.4e-208 Score=2117.34 Aligned_cols=1390 Identities=31% Similarity=0.512 Sum_probs=1182.7
Q ss_pred cccchhhHHHHHhhhhHHHH-HHhhhc-ccccCCc-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccc-c
Q 000522 17 FSKCFDDMILDFATNMVTIF-IILIIG-ITQRSPR-QNQRINLMEKVFLHILPLVGACLSSVDVILLLKEKLHGEFVS-Y 92 (1445)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 92 (1445)
+.+||.+..+..+++.++.+ ....+- ..++.++ ....+.+..|++...++++ ++++.+ +...|..+....+ +
T Consensus 23 ~t~~f~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~ 98 (1522)
T TIGR00957 23 FTKCFQNTVLAWVPCFYLWVCFPCYFLYLSRHDRGYIQMTHLNKTKTALGFLLWI---VCWADL-FYSFWERSHGRAPAP 98 (1522)
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcCCcchHHHHHHHHHHHHHH---HHHHHH-HHHHHhccccccccc
Confidence 55999998887777666655 222111 1122222 3445667778776655543 333222 2333333222222 5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHHHHHHHHHHhHHhhhhhhhh----hhHHHHHHHHHHHHHH
Q 000522 93 HEWLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIKPVMGILHQLVTFSSFEVLK----CLKEICLVLLDIMFGI 168 (1445)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~l~~~~~~~~~~~~~~~rt~~~~~~~~~----~~~~~~~~~~~~~~~~ 168 (1445)
.+++++++.++++++++++++.||.|+.|||.++.+||++++++|++++||+|....... .. ....+++.++++.
T Consensus 99 ~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 177 (1522)
T TIGR00957 99 VFLVSPTLLGITMLLATFLIQLERRKGVQSSGIMLTFWLVALVCALAILRSKILLALKEDAIVDPF-RDTTFYIYFALVL 177 (1522)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhcccCCCcchhHHHHHHHHHHHHHHHHHHHHhhcccccccce-ehhhHHHHHHHHH
Confidence 678899999999999999999999999999999999999999999999999987532110 11 1223334444444
Q ss_pred HHHHHHh-hcccCcccccccccccCCCCCcCCCCCCCCCCCChhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhH
Q 000522 169 SINIIRV-KRASSRRSSIEESLLSVDGDVEEDCNTDSGNNQSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPST 247 (1445)
Q Consensus 169 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~sr~~f~Wl~pl~~~g~~~~L~~~dl~~l~~~~~~~~ 247 (1445)
+.++.+. .++++ .+.+.. ....++||+++|++||++|||+||++++|||++|+.+|||+++++++++.
T Consensus 178 ~~~~~~~~~~~~~--------~~~~~~---~~~~~~~e~~a~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~~~~~~~~ 246 (1522)
T TIGR00957 178 SQLVLSCFSDKSP--------LFSETN---HDPNPCPESSASFLSRITFWWITGMAVYGYRQPLEESDLWSLNKEDTSEM 246 (1522)
T ss_pred HHHHHHhhcCCCC--------cccccc---ccCCCCCcccCCHHHHHHHHHhHHHHHHHhcCCCChhhccCCCHhHhHHH
Confidence 4433332 22222 111100 01246799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc---------------------------------------CCCCchHHHHHHHHHhHhHHHHHHHH
Q 000522 248 CHSKLLSCWQAQRSC---------------------------------------NCTNPSLVRAICCAYGYPYICLGLLK 288 (1445)
Q Consensus 248 ~~~~~~~~w~~~~~~---------------------------------------~~~~~~l~~~l~~~~~~~~~~~~l~~ 288 (1445)
+.++|++.|+++.++ +.++++|+++++++|++.++..++++
T Consensus 247 ~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~l~~~~~~ 326 (1522)
T TIGR00957 247 VVPVLVENWKKECKKTRKQPVSAVYGKKDPSKPKGSSQLDANEEVEALIVKSPHKPRKPSLFKVLYKTFGPYFLMSFCFK 326 (1522)
T ss_pred HHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccCCccHHHHHHHHHhHHHHHHHHHH
Confidence 999999999875310 11347899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 000522 289 VVNDSIGFAGPLLLNKLIKFLQQG-SGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRL 367 (1445)
Q Consensus 289 l~~~~~~~~~P~ll~~li~~~~~~-~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy~K~L~l~~ 367 (1445)
++.+++.+++|++++.+++++.++ .+.+.||++++++++++++.+++.++|.|...+++.++|++|+..||+|+|+++.
T Consensus 327 l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~ 406 (1522)
T TIGR00957 327 AIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYRKALVITN 406 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 999999999999999999999763 3455689999999999999999999999999999999999999999999999999
Q ss_pred cccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 368 AERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATE 447 (1445)
Q Consensus 368 ~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (1445)
..+++.+.|+++|+|++|++++..+...+|.+|..|++++++++++|.++|+++++|++++++++|++.++++++++.++
T Consensus 407 ~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 486 (1522)
T TIGR00957 407 SARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMAMKTKTYQV 486 (1522)
T ss_pred hhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Q 000522 448 KMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALM- 526 (1445)
Q Consensus 448 ~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~- 526 (1445)
++++.+|+|++.++|+++|||+||+||||+.+.+++++.|++|++..++..+...+..+.+...|.++.+++|++|.+.
T Consensus 487 ~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~ 566 (1522)
T TIGR00957 487 AHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVALITFAVYVTVD 566 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999888888888888888889999999876
Q ss_pred -CCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcCCCCcccCCCccCCCCCce
Q 000522 527 -GHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMA 605 (1445)
Q Consensus 527 -~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (1445)
++.++++.+|+++++++++..|+..+|..++.+.++++|++||++||+.++.++..... ... .......
T Consensus 567 ~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~--~~~--------~~~~~~~ 636 (1522)
T TIGR00957 567 ENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIER--RTI--------KPGEGNS 636 (1522)
T ss_pred CCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccc--ccc--------CCCCCCc
Confidence 46799999999999999999999999999999999999999999999876543211000 000 0011236
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcCeEEEEcCCCCCCC
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILS 685 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~~Q~p~l~~ 685 (1445)
++++|++|+|+.. + +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|+||||+|+||+++
T Consensus 637 i~~~~~~~~~~~~-~---~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~i~yv~Q~~~l~~ 712 (1522)
T TIGR00957 637 ITVHNATFTWARD-L---PPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKGSVAYVPQQAWIQN 712 (1522)
T ss_pred EEEEEeEEEcCCC-C---CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECCEEEEEcCCccccC
Confidence 9999999999742 1 24599999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcC
Q 000522 686 GTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVD 765 (1445)
Q Consensus 686 ~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD 765 (1445)
+||||||.||.++|+++|++++++|++.+|++.+|+||+|.+|++|.+|||||||||+||||+|++|+|++||||||+||
T Consensus 713 ~Ti~eNI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD 792 (1522)
T TIGR00957 713 DSLRENILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVD 792 (1522)
T ss_pred CcHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcC-cccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHhccccCcccccccchhh-----h
Q 000522 766 AQVARWILSNAIMG-PHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSL-----H 839 (1445)
Q Consensus 766 ~~~~~~i~~~~~~~-~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~-----~ 839 (1445)
+++++++++.++.. .+.+++|+|+|||+++.++.||+|++|++|+++++|+++++.++.+.+.....+..... +
T Consensus 793 ~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~ 872 (1522)
T TIGR00957 793 AHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLE 872 (1522)
T ss_pred HHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcchhHHHHHHhhcccccccccc
Confidence 99999999986521 15678999999999999999999999999999999999999865444332211000000 0
Q ss_pred hh------hhhhhc-------cc----cchhhh------h--hh---h---hc--ccccCCchhhHHHHHHHHhcCccch
Q 000522 840 MQ------KQEMRT-------NA----SSANKQ------I--LL---Q---EK--DVVSVSDDAQEIIEVEQRKEGRVEL 886 (1445)
Q Consensus 840 ~~------~~~~~~-------~~----~~~~~~------~--~~---~---~~--~~~~~~~~~~~~~~~e~~~~g~v~~ 886 (1445)
.. .+..+. .. ...... . .. . .. +.....+...+..++|.++.|.+++
T Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~ 952 (1522)
T TIGR00957 873 DSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVEL 952 (1522)
T ss_pred ccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhHHHHHHhcCcccH
Confidence 00 000000 00 000000 0 00 0 00 0000000112344567778899999
Q ss_pred hhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 887 TVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFG 966 (1445)
Q Consensus 887 ~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~ 966 (1445)
++|++|+++.|+...++++++.++.+++..++++|+++|++............+|+++|++++++..++.++..+++.+.
T Consensus 953 ~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~ 1032 (1522)
T TIGR00957 953 SVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIG 1032 (1522)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998877766667777778888899999999997532111223345678899999999998888888888999
Q ss_pred HHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHH
Q 000522 967 SLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLV 1046 (1445)
Q Consensus 967 ~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 1046 (1445)
+.++++++|++++++++++|++|||++|+|+++|||++|++.+|+.++..+..++..++.+++.++++++..|+++++++
T Consensus 1033 ~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~ 1112 (1522)
T TIGR00957 1033 GIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIP 1112 (1522)
T ss_pred HHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998888889999988889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 000522 1047 PFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLS 1126 (1445)
Q Consensus 1047 pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~ 1126 (1445)
|++++++.++++|.+++|++++++.++++|+++++.|+++|+.|||+||+|++|.+++.+..|.++++.+.....++|++
T Consensus 1113 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 1192 (1522)
T TIGR00957 1113 PLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLA 1192 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccc
Q 000522 1127 LRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE 1206 (1445)
Q Consensus 1127 ~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~ 1206 (1445)
.++++++.+++.+++.+.+.. .+..++|.+|++++|+..+..++.++++.++++|+.++|++|+.+|.+.++|+
T Consensus 1193 ~~~~~~~~~~~~~~~~~~v~~------~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~ 1266 (1522)
T TIGR00957 1193 VRLECVGNCIVLFAALFAVIS------RHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEA 1266 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 999998876555554444421 13457899999999999999999999999999999999999999999888765
Q ss_pred cc--cCCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Q 000522 1207 LC--GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD 1284 (1445)
Q Consensus 1207 ~~--~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ID 1284 (1445)
.. +...++++||.+|.|+|+||+|+|+++.++||+||||+|+||||||||||||||||||+++|+|+|+|++|+|.||
T Consensus 1267 ~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~Id 1346 (1522)
T TIGR00957 1267 PWQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIID 1346 (1522)
T ss_pred cccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEEC
Confidence 31 2234556799999999999999998877789999999999999999999999999999999999999999999999
Q ss_pred CeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhH
Q 000522 1285 GLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1362 (1445)
Q Consensus 1285 G~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQ 1362 (1445)
|+||++++++++|++|++|||||+||+||||+||||+++++|+|+|+|+++|+++++++++ ||||.++|+|.+|||||
T Consensus 1347 G~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQ 1426 (1522)
T TIGR00957 1347 GLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQ 1426 (1522)
T ss_pred CEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999998 99999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||+||||||+|+|+|||||||||+||.+||+.||++|++.|++||||+||||++++++||||+|||+|+|+|+|+|+++
T Consensus 1427 rQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eL 1506 (1522)
T TIGR00957 1427 RQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNL 1506 (1522)
T ss_pred HHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999886
No 3
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.2e-208 Score=2111.16 Aligned_cols=1412 Identities=31% Similarity=0.518 Sum_probs=1169.0
Q ss_pred CccCCCCcc-ccccc------ccccchhhHHHHHhhhhHHHH-HHhhh-cccc-cCCcccchhhHHHHHHHHHHHHHHHH
Q 000522 2 DFICPNSPF-VWDGS------TFSKCFDDMILDFATNMVTIF-IILII-GITQ-RSPRQNQRINLMEKVFLHILPLVGAC 71 (1445)
Q Consensus 2 ~~~~~~~~~-~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~-~~~~~~~~~~~~~k~~~~~~~~~~~~ 71 (1445)
+-+|+.... +|.+. .+.+||++.++..+++.+..+ ..+.+ -.++ .....+..+..+.|..+.++++..++
T Consensus 7 ~~~c~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1622)
T PLN03130 7 DWYCRPVPNGVWAKKVDNAFGAYTPCATDSLVINISHLVLLGLCLYRIWLIKKDHKVQRFCLRSKWYNYFLALLAAYCTA 86 (1622)
T ss_pred hhhcCCCccCCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHhccccccCCccccchHHHHHHHHHHHHHHH
Confidence 347964332 35553 466999995555444444433 11111 1111 12222233356666666555544333
Q ss_pred HHHHHHHHH---HHHhhc-CccccchH-HHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHH---HHHHHHHHhH
Q 000522 72 LSSVDVILL---LKEKLH-GEFVSYHE-WLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIK---PVMGILHQLV 143 (1445)
Q Consensus 72 ~~~~~~~~~---~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~l~~~~~~~---~~~~~~~~rt 143 (1445)
..++..... ..+... +.+..+.. +++.++..++++++.++.+.||.|+.+++..+.+||++. +++.++.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 163 (1622)
T PLN03130 87 EPLFRLVMGISVLNLDGQTSLPPFEIVSLIVEALTWCSMLVMIGVETKIYIREFRWYVRFAVIYVLVGDAVMLNLVL--- 163 (1622)
T ss_pred HHHHHHHHHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeehhHHHhhHHHHHHHHH---
Confidence 332221110 111111 11222333 666788888888888899999999999999999999998 7777662
Q ss_pred Hhhhhhhhh---hhHHHHHHHHHHHHHHHH-HHHHhhcccCccccc---ccccccCCCC-CcCCCCCCCCCCCChhHHHH
Q 000522 144 TFSSFEVLK---CLKEICLVLLDIMFGISI-NIIRVKRASSRRSSI---EESLLSVDGD-VEEDCNTDSGNNQSYWDLMA 215 (1445)
Q Consensus 144 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~e~~~~~~sr~~ 215 (1445)
..++.... .. ....+++.+.+.++. ++.+..++.+ .+. .+...+.+++ .....+++||+++|+|||++
T Consensus 164 -~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~ 239 (1622)
T PLN03130 164 -SVKEYYSSFVLYL-YISEVAAQVLFGILLLVYFPNLDPYP--GYTPIGSESVDDYEYEELPGGEQICPERHANIFSRIF 239 (1622)
T ss_pred -HHHHHHhccccce-ehhHHHHHHHHHHHHHHHHhcCCCCc--ccccccccccccccccCCcccCCCCcccccCHHHHHH
Confidence 11111111 11 222333344433333 2222222211 110 0000000000 01234678999999999999
Q ss_pred HHhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhHhHHHHHHHHHHHHHHH
Q 000522 216 FKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYICLGLLKVVNDSIG 295 (1445)
Q Consensus 216 f~Wl~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~~~~~l~~l~~~~~~ 295 (1445)
|||++|++++|||++|+.+|||+++++++++.+.++|++.|+++. + +++++|+++++++|++.++..++++++..++.
T Consensus 240 F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~-~-~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~ 317 (1622)
T PLN03130 240 FGWMTPLMQLGYKRPLTEKDVWKLDTWDQTETLYRSFQKCWDEEL-K-KPKPWLLRALNNSLGGRFWLGGFFKIGNDLSQ 317 (1622)
T ss_pred HHHHHHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHHh-c-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999875 2 35689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCh
Q 000522 296 FAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSD 375 (1445)
Q Consensus 296 ~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~ 375 (1445)
+++|++++.+++++.++...+.++++++++++..++.+++.++|.+...+++.++|+.+...+|+|+++++...+++.++
T Consensus 318 ~~~P~ll~~li~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~ 397 (1622)
T PLN03130 318 FVGPLLLNLLLESMQNGEPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTS 397 (1622)
T ss_pred HHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCH
Confidence 99999999999999764444667877777777777777788888888999999999999999999999999988888899
Q ss_pred hHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 376 GEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDE 455 (1445)
Q Consensus 376 g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 455 (1445)
|+++|+|++|++++.+....+|.+|..|+++++++++||..+|+++++|++++++++|++.++++++++.++++++.+|+
T Consensus 398 G~ivnl~s~Dv~~i~~~~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~ 477 (1622)
T PLN03130 398 GKITNLMTTDAEALQQICQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDK 477 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999889999999999999999999999999999
Q ss_pred HHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHH
Q 000522 456 RIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMV 535 (1445)
Q Consensus 456 R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ 535 (1445)
|++.++|+++|||+||+||||+.+.+++++.|++|++..++..+..++..+++...|.++.+++|++|.+.++.+|++.+
T Consensus 478 r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~v 557 (1622)
T PLN03130 478 RIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARA 557 (1622)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999988888888888888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcCCCCcccCCCccCCCCCceEEEEccEEec
Q 000522 536 FTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSW 615 (1445)
Q Consensus 536 ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w 615 (1445)
|+++++++.+..|+..+|..+..+.++++|++||++||+.+|..+... .+. ......|+++|++|+|
T Consensus 558 f~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~----~~~---------~~~~~~I~~~nvsf~y 624 (1622)
T PLN03130 558 FTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPN----PPL---------EPGLPAISIKNGYFSW 624 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccC----Ccc---------cCCCCceEEEeeEEEc
Confidence 999999999999999999999999999999999999998765422100 000 0122469999999999
Q ss_pred ccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCC-eEEEEcCeEEEEcCCCCCCCccHHHHHhc
Q 000522 616 YCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH-GSIHASGSIAYVPQVPWILSGTIRDNILF 694 (1445)
Q Consensus 616 ~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~-G~i~~~~~i~y~~Q~p~l~~~ti~~nI~~ 694 (1445)
++.++ +++|+|+||++++|++++|+||+|||||||+++|+|+++|++ |+|.++++||||+|+|||||+||||||+|
T Consensus 625 ~~~~~---~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreNI~f 701 (1622)
T PLN03130 625 DSKAE---RPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDNILF 701 (1622)
T ss_pred cCCCC---CceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHHHhC
Confidence 75332 345999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred CCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHH
Q 000522 695 GKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILS 774 (1445)
Q Consensus 695 g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~ 774 (1445)
|+++|+++|++++++|+|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++|++
T Consensus 702 g~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~ 781 (1622)
T PLN03130 702 GSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFD 781 (1622)
T ss_pred CCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHhccccCcccccccchhhhhhhh--hhhcc-ccc
Q 000522 775 NAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQ--EMRTN-ASS 851 (1445)
Q Consensus 775 ~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~ 851 (1445)
+|+.+ .++++|+|+|||+++.++.||+|++|++|+|+++|+++|++++.+.+..+..+.....+.... +.... ...
T Consensus 782 ~~l~~-~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 860 (1622)
T PLN03130 782 KCIKD-ELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENGEEEDDQTSS 860 (1622)
T ss_pred HHhhH-HhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHHHHHHhccccccccccccccccccccc
Confidence 98766 568899999999999999999999999999999999999987655443322111000000000 00000 000
Q ss_pred hhh-h---hhhhhcc--cccCCchhhHHHHHHHHhcCccchhhHHHHHhhhhH-HHHHHHHHHHHHHHHHHhhhhhHhhh
Q 000522 852 ANK-Q---ILLQEKD--VVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGW-FITLVICLSAILMQASRNGNDLWLSY 924 (1445)
Q Consensus 852 ~~~-~---~~~~~~~--~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~-~~~~~~~~~~~~~~~~~~~~~~wl~~ 924 (1445)
... . ....... ..+..+......++|+++.|.+++++|++|+++.|. +.+++++++.++.++...++++|+++
T Consensus 861 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~ 940 (1622)
T PLN03130 861 KPVANGNANNLKKDSSSKKKSKEGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSE 940 (1622)
T ss_pred ccccccccccccccccccccccccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0 0000000 000000112234567788999999999999998653 34444455666778888899999999
Q ss_pred hhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHh
Q 000522 925 WVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSS 1004 (1445)
Q Consensus 925 w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~ 1004 (1445)
|++.... ......+|+++|++++++..++.+++.+.+.+.+.+++.++|++++++++++|++|||++|+|+|+|||++
T Consensus 941 w~~~~~~--~~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~ 1018 (1622)
T PLN03130 941 WTDQGTP--KTHGPLFYNLIYALLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAK 1018 (1622)
T ss_pred HHhcccc--CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHH
Confidence 9975322 12234568888999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHh
Q 000522 1005 DLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTET 1084 (1445)
Q Consensus 1005 D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Et 1084 (1445)
|++.+|..++..+..++..++.+++.++++++..|+++++++|+.++++.++++|.+++|++++++.++++|+++|+.|+
T Consensus 1019 Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Et 1098 (1622)
T PLN03130 1019 DLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEA 1098 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 99999999999999999999999988888888888888888898888888899999999999999999999999999999
Q ss_pred hccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHH
Q 000522 1085 LNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGL 1164 (1445)
Q Consensus 1085 l~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl 1164 (1445)
++|+.|||+|+++++|.+++.+..|.+++..+.....++|+++++++++++++.+.+.+.+.... ........++.+|+
T Consensus 1099 l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~~~-~~~~~~~~~~~~G~ 1177 (1622)
T PLN03130 1099 LNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQNG-RAENQAAFASTMGL 1177 (1622)
T ss_pred hCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-ccccchhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999888766555544443211 10011122678899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccc--cCCCCCCCCCCCccEEEEEEEEEeCCCCCcccee
Q 000522 1165 ALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC--GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHD 1242 (1445)
Q Consensus 1165 ~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~--~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~ 1242 (1445)
+++|++.+...++++.+.+.++|+.++|+||+.+|.+.|+|+.. +...+++.||.+|.|+|+||+|+|+++.++||+|
T Consensus 1178 ~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~ 1257 (1622)
T PLN03130 1178 LLSYALNITSLLTAVLRLASLAENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHG 1257 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecc
Confidence 99999999999999999999999999999999999998887532 2234556799999999999999999877789999
Q ss_pred eeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCC
Q 000522 1243 INFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH 1322 (1445)
Q Consensus 1243 isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~ 1322 (1445)
+||+|+||||||||||||||||||+++|+|+|+|++|+|.|||+||++++++++|++|++|||||+||+||||+||||++
T Consensus 1258 is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~ 1337 (1622)
T PLN03130 1258 LSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN 1337 (1622)
T ss_pred eeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHH
Q 000522 1323 MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAI 1400 (1445)
Q Consensus 1323 ~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I 1400 (1445)
+++|+|+|+||++|+++++++++ ||||.++|+|.||||||||||||||||||+|+|||||||||+||.+||+.||++|
T Consensus 1338 ~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I 1417 (1622)
T PLN03130 1338 EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTI 1417 (1622)
T ss_pred CCCHHHHHHHHHHcCcHHHHHhCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHH
Confidence 99999999999999999999998 9999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1401 SSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1401 ~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++.+++||||+||||++|+++||||+|||+|+|+|+|+|+++
T Consensus 1418 ~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G~IvE~Gt~~eL 1459 (1622)
T PLN03130 1418 REEFKSCTMLIIAHRLNTIIDCDRILVLDAGRVVEFDTPENL 1459 (1622)
T ss_pred HHHCCCCEEEEEeCChHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999999886
No 4
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.3e-204 Score=2075.39 Aligned_cols=1412 Identities=30% Similarity=0.514 Sum_probs=1162.4
Q ss_pred cCCCCc-cccccc------ccccchhhHHHHHhhhhHHHH-HHhhh-cc-cccCCcccchhhHHHHHHHHHHHHHHHHHH
Q 000522 4 ICPNSP-FVWDGS------TFSKCFDDMILDFATNMVTIF-IILII-GI-TQRSPRQNQRINLMEKVFLHILPLVGACLS 73 (1445)
Q Consensus 4 ~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~-~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 73 (1445)
+|+... ..|.+. .+.+||++..+...++.+..+ ..+.. -. ..++...+..+..+.|+.+.+++++.++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (1495)
T PLN03232 9 YCKPIAEGFWEKTVDGAFGAYTPCAIDSLVMIVSHSVLLGLCFYRIWIILDNAKAQIYVLRKKYYNCVLGILACYCVVEP 88 (1495)
T ss_pred hcCCccccCCCcccccccCCCCccHHhhHHHHHHHHHHHHHHHHHHHHHhhccccCCccccchHHHHHHHHHHHHHHHHH
Confidence 785322 245543 356999995555555444433 21111 11 012222222236666666655554433333
Q ss_pred HHHHHH---HHHHhhc-CccccchH-HHHHHHHHHHHHHHHHHHHhhccccCCchhHHHHHHHHH---HHHHHHHHhHHh
Q 000522 74 SVDVIL---LLKEKLH-GEFVSYHE-WLSSCSEFTVWTIIVLLSRCACFHCLFCHRILCFWWIIK---PVMGILHQLVTF 145 (1445)
Q Consensus 74 ~~~~~~---~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~~~~~~~s~~l~~~~~~~---~~~~~~~~rt~~ 145 (1445)
+..... ...+... .....+.. +++.++..++++++..+.+.||.|+.+++..+.+||++. +++.++. .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 164 (1495)
T PLN03232 89 VLRLVMGISLFDMDEETDLPPFEVASLMVEAFAWFSMLVLIGLETKQYVKEFRWYVRFGVVYVLVADAVLLDLVL----P 164 (1495)
T ss_pred HHHHHHHhhhhccccccccccchhHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCceeeehhHhhhhHHHHHHHH----H
Confidence 222111 0111111 11223334 667788888888788899999999999999999999999 7777762 1
Q ss_pred hhhhhhh---hhHHHHHHHHHHHHHHHH-HHHHhhcccCcccccccccccC-CC-CCcCCCCCCCCCCCChhHHHHHHhH
Q 000522 146 SSFEVLK---CLKEICLVLLDIMFGISI-NIIRVKRASSRRSSIEESLLSV-DG-DVEEDCNTDSGNNQSYWDLMAFKSI 219 (1445)
Q Consensus 146 ~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~e~~~~~~sr~~f~Wl 219 (1445)
.++.... .. ....+++.+.+.+.. +..+..++.+.-.....+...+ .+ ..+....++||+++|+|||++|+|+
T Consensus 165 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~f~w~ 243 (1495)
T PLN03232 165 LKNSINRTALYL-CISSRCCQALFGILLLVYIPELDPYPGYHILNNESLDNVEYDALRGGENICPERYASIFSRIYFSWM 243 (1495)
T ss_pred HHHHHhccccce-ehhHHHHHHHHHHHHHHhcccCCCCCcccccccccccccccccccccCCCCccccCCHHHHHHHHHH
Confidence 1111111 11 122222333332222 2222222111000000000000 00 0011246789999999999999999
Q ss_pred HHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHH
Q 000522 220 DSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPYICLGLLKVVNDSIGFAGP 299 (1445)
Q Consensus 220 ~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P 299 (1445)
+|++++||+++|+.+|||+|+++++++.+.++|++.|+++. + +++++|+++++++|++.++..++++++.+++.+++|
T Consensus 244 ~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~-~-~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~P 321 (1495)
T PLN03232 244 TPLMQLGYRKPITEKDVWQLDQWDQTETLIKRFQRCWTEES-R-RPKPWLLRALNNSLGGRFWLGGIFKIGHDLSQFVGP 321 (1495)
T ss_pred HHHHHHHhcCCCChhhccCCChhhhHHHHHHHHHHHHHHhh-c-cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999765 2 356899999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHHH
Q 000522 300 LLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQ 379 (1445)
Q Consensus 300 ~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~ 379 (1445)
++++.+++++++++..+.++.+++++++..++.+++.++|.+...+++.++|+.+...+|+|+++++....++.++|+++
T Consensus 322 ~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~ 401 (1495)
T PLN03232 322 VILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVT 401 (1495)
T ss_pred HHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHH
Confidence 99999999997644455688888888888888999999999999999999999999999999999999888888999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 380 TFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRR 459 (1445)
Q Consensus 380 nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~ 459 (1445)
|+|++|++++.+....+|.+|..|++++++++++|+.+|++++++++++++++|++.++++++++.++++++.+|+|.+.
T Consensus 402 n~ls~Dv~~i~~~~~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~ 481 (1495)
T PLN03232 402 NMITTDANALQQIAEQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGI 481 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHHHH
Q 000522 460 TGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCL 539 (1445)
Q Consensus 460 ~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l 539 (1445)
++|+++|||+||+||||+.+.+++++.|++|++..++..+..++..+++...|.++.+++|++|.+.++.+|++.+|+++
T Consensus 482 ~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~vf~~l 561 (1495)
T PLN03232 482 INEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARAFTSL 561 (1495)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999988888877777788888889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcCCCCcccCCCccCCCCCceEEEEccEEecccCC
Q 000522 540 ALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNN 619 (1445)
Q Consensus 540 ~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~ 619 (1445)
++++.+..|+..+|..+..+.++++|++||++|++.++..+... .+. ......++++|++|+|+..+
T Consensus 562 ~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~----~~~---------~~~~~~I~~~~vsF~y~~~~ 628 (1495)
T PLN03232 562 SLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQN----PPL---------QPGAPAISIKNGYFSWDSKT 628 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc----CCc---------CCCCCcEEEEeeEEEcCCCC
Confidence 99999999999999999999999999999999998665321100 000 01234699999999997532
Q ss_pred ccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeE-EEEcCeEEEEcCCCCCCCccHHHHHhcCCCC
Q 000522 620 EEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS-IHASGSIAYVPQVPWILSGTIRDNILFGKNY 698 (1445)
Q Consensus 620 ~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~-i~~~~~i~y~~Q~p~l~~~ti~~nI~~g~~~ 698 (1445)
+ +++|+|+||++++||+++|+||+|||||||+++|+|+++|++|. +.++++||||+|+|||||+||||||+||+++
T Consensus 629 ~---~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~ 705 (1495)
T PLN03232 629 S---KPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGSDF 705 (1495)
T ss_pred C---CceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCCcc
Confidence 2 34599999999999999999999999999999999999999975 5678999999999999999999999999999
Q ss_pred ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhc
Q 000522 699 DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIM 778 (1445)
Q Consensus 699 ~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~ 778 (1445)
|+++|++++++|+|++|++.+|+||+|+|||+|.+|||||||||+||||+|++||||||||||||||++++++|+++|+.
T Consensus 706 ~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~ 785 (1495)
T PLN03232 706 ESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMK 785 (1495)
T ss_pred CHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred CcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHhccccCcccccccchhhhhhhhhh-hccccc-h-hhh
Q 000522 779 GPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEM-RTNASS-A-NKQ 855 (1445)
Q Consensus 779 ~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~-~~~ 855 (1445)
+ .++++|+|+|||+++.++.||+|++|++|+|+++|+++|+.+..+.+..+..+.....+..+... ..+... . ..+
T Consensus 786 ~-~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 864 (1495)
T PLN03232 786 D-ELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSLFKKLMENAGKMDATQEVNTNDENILKLGPTVT 864 (1495)
T ss_pred h-hhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchhHHHHHHhccccccccccccccccccccccccc
Confidence 6 56889999999999999999999999999999999999998765544433221110000000000 000000 0 000
Q ss_pred hhhhhc---ccccCCchhhHHHHHHHHhcCccchhhHHHHHhhhh-HHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCC
Q 000522 856 ILLQEK---DVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG-WFITLVICLSAILMQASRNGNDLWLSYWVDTTGS 931 (1445)
Q Consensus 856 ~~~~~~---~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~ 931 (1445)
....+. +..+..+......++|+++.|.+++++|++|+++.| ++...+++++.++.++...++++|+++|++....
T Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~ 944 (1495)
T PLN03232 865 IDVSERNLGSTKQGKRGRSVLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTP 944 (1495)
T ss_pred ccccccccccccccccchhhhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 000000 000000011224466778899999999999999865 3444455556667778888899999999875321
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhh
Q 000522 932 SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDD 1011 (1445)
Q Consensus 932 ~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~ 1011 (1445)
......+|+++|++++++..++.+++.+.+...+.+++.++|++++++++++|++||+++|+|+++|||++|++.+|+
T Consensus 945 --~~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~ 1022 (1495)
T PLN03232 945 --KSYSPGFYIVVYALLGFGQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDR 1022 (1495)
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHH
Confidence 122346789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHH
Q 000522 1012 SLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTI 1091 (1445)
Q Consensus 1012 ~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tI 1091 (1445)
.++..+..++..++.+++.++++++..++++++++|+.++++.++.+|.+++|++++.+..+++|+++++.|+++|+.||
T Consensus 1023 ~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tI 1102 (1495)
T PLN03232 1023 NVANLMNMFMNQLWQLLSTFALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSI 1102 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHH
Confidence 99999999988888888888877777788778888888888888899999999999999999999999999999999999
Q ss_pred HhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHH
Q 000522 1092 RAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAP 1171 (1445)
Q Consensus 1092 raf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~ 1171 (1445)
|+||++++|.+++.+..|.+++..+.....++|+..++++++++++.+.+.+.+... +........++.+|++++|+..
T Consensus 1103 raf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~~~~~~g~~~~~~~~ 1181 (1495)
T PLN03232 1103 RAYKAYDRMAKINGKSMDNNIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLRN-GNAENQAGFASTMGLLLSYTLN 1181 (1495)
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-ccccccccchHHHHHHHHHHHH
Confidence 999999999999999999999999998899999999998887655544444443321 1110111235678889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccc--cCCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeC
Q 000522 1172 IVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELC--GYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEG 1249 (1445)
Q Consensus 1172 ~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~--~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~ 1249 (1445)
+..+++++++.+.++|+.++|+||+.++.+.|+|+.. +...++++||.+|.|+|+||+|+|+++.++||+|+||+|+|
T Consensus 1182 ~~~~l~~l~~~~~~~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~ 1261 (1495)
T PLN03232 1182 ITTLLSGVLRQASKAENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSP 1261 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcC
Confidence 9999999999999999999999999999998877532 22234567999999999999999988778899999999999
Q ss_pred CcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCCCCChHHH
Q 000522 1250 GTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKI 1329 (1445)
Q Consensus 1250 GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~~sd~ei 1329 (1445)
|||||||||||||||||+++|+|+++|++|+|.|||+||++++++++|++|++|||||+||+|||||||||+++++|+|+
T Consensus 1262 GekvaIVG~SGSGKSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei 1341 (1495)
T PLN03232 1262 SEKVGVVGRTGAGKSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADL 1341 (1495)
T ss_pred CCEEEEECCCCCCHHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCc
Q 000522 1330 WSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGM 1407 (1445)
Q Consensus 1330 ~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~ 1407 (1445)
|+|+++++++++++++ ||||.++|+|.||||||||||||||||+|+|+|||||||||+||.+||+.||++|++.+++|
T Consensus 1342 ~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~ 1421 (1495)
T PLN03232 1342 WEALERAHIKDVIDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSC 1421 (1495)
T ss_pred HHHHHHcCCHHHHHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCC
Confidence 9999999999999998 99999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1408 TVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1408 TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||+||||++|+++||||+|||+|+|+|+|+|+|+
T Consensus 1422 TvI~IAHRl~ti~~~DrIlVL~~G~ivE~Gt~~eL 1456 (1495)
T PLN03232 1422 TMLVIAHRLNTIIDCDKILVLSSGQVLEYDSPQEL 1456 (1495)
T ss_pred EEEEEeCCHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999886
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=7e-194 Score=1965.51 Aligned_cols=1215 Identities=27% Similarity=0.457 Sum_probs=1061.6
Q ss_pred CCCCCCCChhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHHHHHhhhcCCCCchHHHHHHHHHhHhH
Q 000522 202 TDSGNNQSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSCNCTNPSLVRAICCAYGYPY 281 (1445)
Q Consensus 202 ~~~e~~~~~~sr~~f~Wl~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~l~~~l~~~~~~~~ 281 (1445)
++||+++|+|||++|||+||++++||+++|+.+|||+|+++++++.+.++|++.|+++..++.++++|+++++++|+|++
T Consensus 3 ~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~~~~~~L~~~l~~~~~~~~ 82 (1490)
T TIGR01271 3 RSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELASAKKNPKLLNALRRCFFWRF 82 (1490)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999998765333456899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 282 ICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGS--GHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIY 359 (1445)
Q Consensus 282 ~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~--~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy 359 (1445)
+..++++++.+++.+++|+++++++++++... ..+.+|++++++++++++.+++.+++.|...++++++|++|...||
T Consensus 83 ~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy 162 (1490)
T TIGR01271 83 VFYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIY 162 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999996422 2456899999999999999999999999999999999999999999
Q ss_pred HHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 000522 360 QKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIA 439 (1445)
Q Consensus 360 ~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~~~~~~~~~~~~~ 439 (1445)
+|+|+++....++.++|+++|+|++|++++..+...+|.+|..|+++++++++||+++|+++++|++++++++|++.+++
T Consensus 163 ~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~~ 242 (1490)
T TIGR01271 163 KKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACLG 242 (1490)
T ss_pred HHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 440 NLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTPTLFSLFT 519 (1445)
Q Consensus 440 ~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (1445)
+++.++++++++.+|+|++.++|+|+|||+||+||||+.|.+++++.|++|++..++..++..+..+++...|.++++++
T Consensus 243 ~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (1490)
T TIGR01271 243 QKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVFLS 322 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888888888999999999
Q ss_pred HHHHHHhCCCCCHhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcCCCCcccCCCcc
Q 000522 520 FGLFALMGHQLDAAMVFTCLALFNSLISPLN-SFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSN 598 (1445)
Q Consensus 520 f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~-~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~~~ 598 (1445)
|++|.+.++ ++++.+||+++++++++.|+. .+|..+..+.++.+|++||++||..+|.++...
T Consensus 323 f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~--------------- 386 (1490)
T TIGR01271 323 VVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEY--------------- 386 (1490)
T ss_pred HHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc---------------
Confidence 999988755 789999999999999999985 799999999999999999999998776432100
Q ss_pred CCCCCceEEEEccEEecccCC----------------c-c-----------ccccceeeeeeEeeCCCEEEEEcCCCCcH
Q 000522 599 FNSKDMAVIMQDATCSWYCNN----------------E-E-----------EQNVVLNQVSLCLPKGSLVAVIGEVGSGK 650 (1445)
Q Consensus 599 ~~~~~~~i~~~~~~f~w~~~~----------------~-~-----------~~~~~l~~i~l~i~~G~~~~ivG~~GsGK 650 (1445)
......++++|++|.|+... . . ..+++|+|+||+|++|++++|+|||||||
T Consensus 387 -~~~~~~i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGK 465 (1490)
T TIGR01271 387 -NLTTTEVEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGK 465 (1490)
T ss_pred -cCCCCceEEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCH
Confidence 01123588999999995310 0 0 01357999999999999999999999999
Q ss_pred HHHHHHHhcCccCCCeEEEEcCeEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCC
Q 000522 651 SSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1445)
Q Consensus 651 Stll~~l~g~~~~~~G~i~~~~~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~ 730 (1445)
||||++|+|+++|++|+|.++|+||||+|+||++++||+|||+||.++++++|++++++|+|++|++.+|+||+|.+|++
T Consensus 466 STLl~~l~G~~~~~~G~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~ 545 (1490)
T TIGR01271 466 SSLLMMIMGELEPSEGKIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEG 545 (1490)
T ss_pred HHHHHHHhCCCCCCCceEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCE
Q 000522 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1445)
Q Consensus 731 g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~ 810 (1445)
|.+|||||||||+||||+|++|++|||||||||||+++++++++.|+.+ +.+++|+|++||+++.++.||+|++|++|+
T Consensus 546 g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~-~~~~~tvilvtH~~~~~~~ad~ii~l~~g~ 624 (1490)
T TIGR01271 546 GITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCK-LMSNKTRILVTSKLEHLKKADKILLLHEGV 624 (1490)
T ss_pred CCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHH-HhcCCeEEEEeCChHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999987655 567899999999999999999999999999
Q ss_pred EEEecCHhHHHhccccCccccc--------------------------c--c-----c-hh------hhhhhhhh-----
Q 000522 811 VKWIGSSADLAVSLYSGFWSTN--------------------------E--F-----D-TS------LHMQKQEM----- 845 (1445)
Q Consensus 811 i~~~g~~~~~~~~~~~~~~~~~--------------------------~--~-----~-~~------~~~~~~~~----- 845 (1445)
+++.|+++++......+..... + . + .. ...+....
T Consensus 625 i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 704 (1490)
T TIGR01271 625 CYFYGTFSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSI 704 (1490)
T ss_pred EEEEcCHHHHHhcChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999998754211100000 0 0 0 00 00000000
Q ss_pred --------------------------h--ccccch------hh----h-h----h--------------------hh---
Q 000522 846 --------------------------R--TNASSA------NK----Q-I----L--------------------LQ--- 859 (1445)
Q Consensus 846 --------------------------~--~~~~~~------~~----~-~----~--------------------~~--- 859 (1445)
+ .....+ .. + . . ..
T Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 784 (1490)
T TIGR01271 705 ILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNR 784 (1490)
T ss_pred cccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhccccccc
Confidence 0 000000 00 0 0 0 00
Q ss_pred -----hc--cc--------------c-------c-CCc-----------h--hhHHHHHHHHhcCccchhhHHHHHhhhh
Q 000522 860 -----EK--DV--------------V-------S-VSD-----------D--AQEIIEVEQRKEGRVELTVYKNYAKFSG 897 (1445)
Q Consensus 860 -----~~--~~--------------~-------~-~~~-----------~--~~~~~~~e~~~~g~v~~~~y~~y~~~~g 897 (1445)
+. +. . . ..+ + .....++|+++.|.++|++|++|+++.|
T Consensus 785 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g 864 (1490)
T TIGR01271 785 GENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNR 864 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcC
Confidence 00 00 0 0 000 0 0123455677889999999999999876
Q ss_pred H-HHHHHHHHHHHHHHHHHhhhhhHhhhhhcccC-----C-CCC-----------CcchhHH-HHHHHHHHHHHHHHHHH
Q 000522 898 W-FITLVICLSAILMQASRNGNDLWLSYWVDTTG-----S-SQT-----------KYSTSFY-LVVLCIFCMFNSFLTLV 958 (1445)
Q Consensus 898 ~-~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~-----~-~~~-----------~~~~~~~-l~~~~~l~~~~~i~~~~ 958 (1445)
+ ..+++++++.++.+++..++++|+.+|..... . .+. .....+| +.+|+++.++..++.++
T Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 944 (1490)
T TIGR01271 865 NLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFF 944 (1490)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHH
Confidence 5 44444456667778899999999999875210 0 000 0011233 44555555556677778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHH
Q 000522 959 RAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQ 1038 (1445)
Q Consensus 959 ~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~ 1038 (1445)
+.+++...+.+++.++|++++++++++|++||+++|+|+++|||++|++.+|+.+|..+..++..++.+++.++++++..
T Consensus 945 ~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~ 1024 (1490)
T TIGR01271 945 RGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQ 1024 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHH
Q 000522 1039 VFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSE 1118 (1445)
Q Consensus 1039 ~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~ 1118 (1445)
|+++++++|++++++.++++|.+++|++++++..+++|+++|+.|+++|+.|||+||++++|.+++.+..+.+++..+..
T Consensus 1025 p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~ 1104 (1490)
T TIGR01271 1025 PYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLY 1104 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99988899998889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 1119 LTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLE 1198 (1445)
Q Consensus 1119 ~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~ 1198 (1445)
.+.++|+..++++++.+++..++++++.. ....+|.+|++++|++.+...++++++.+.++|+.+.|++|+.+
T Consensus 1105 ~~~~~wl~~~~~~i~~~~~~~~~~l~~~~-------~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~ 1177 (1490)
T TIGR01271 1105 LSTLRWFQMRIDIIFVFFFIAVTFIAIGT-------NQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFK 1177 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998765544433333321 11346778999999999999999999999999999999999999
Q ss_pred hhcCCcccccc----------------CCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCC
Q 000522 1199 YMDVPQEELCG----------------YQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAG 1262 (1445)
Q Consensus 1199 ~~~~~~e~~~~----------------~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSG 1262 (1445)
|.+.|+|+... ...+++.||..|.|+|+||+|+|+++.++||+|+||+|+||||||||||||||
T Consensus 1178 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsG 1257 (1490)
T TIGR01271 1178 FIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSG 1257 (1490)
T ss_pred HhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCC
Confidence 99887764211 01234579999999999999999987789999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHH
Q 000522 1263 KSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEV 1342 (1445)
Q Consensus 1263 KSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i 1342 (1445)
||||+++|+|+++ ++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++++|+++|+||+++++++++
T Consensus 1258 KSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i 1336 (1490)
T TIGR01271 1258 KSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVI 1336 (1490)
T ss_pred HHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHH
Confidence 9999999999998 799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHh
Q 000522 1343 EAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL 1420 (1445)
Q Consensus 1343 ~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~ 1420 (1445)
+++ ||||.|+|+|.||||||||||||||||||+|+|||||||||+||.+||+.||++|++.|++||||+||||++++.
T Consensus 1337 ~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~ 1416 (1490)
T TIGR01271 1337 EQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALL 1416 (1490)
T ss_pred HhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHH
Confidence 998 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCEEEEEeCCeEeeecCCCCC
Q 000522 1421 NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1421 ~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+||||+||++|+|+|+|+|+++
T Consensus 1417 ~~DrIlvL~~G~ivE~g~p~~L 1438 (1490)
T TIGR01271 1417 ECQQFLVIEGSSVKQYDSIQKL 1438 (1490)
T ss_pred hCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999876
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.1e-183 Score=1864.20 Aligned_cols=1234 Identities=32% Similarity=0.526 Sum_probs=1053.6
Q ss_pred CCCCCCCCChhHHHHHHhHHHHHHccccCCCCCCCCCCCCCCCChhHHHHHHHHH----------HHHhhh---------
Q 000522 201 NTDSGNNQSYWDLMAFKSIDSVMNRGVIKQLDFEDLLGLPTDMDPSTCHSKLLSC----------WQAQRS--------- 261 (1445)
Q Consensus 201 ~~~~e~~~~~~sr~~f~Wl~pl~~~g~~~~L~~~dl~~l~~~~~~~~~~~~~~~~----------w~~~~~--------- 261 (1445)
.+.||+++|||.|+++.|++|++.+..|..|+.+|||+...+.++-++..++.+. |+-...
T Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (1560)
T PTZ00243 58 TPVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLDA 137 (1560)
T ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeeccc
Confidence 4569999999999999999999999999999999999998888876666555443 321100
Q ss_pred --------------------------------c-----------------------------------------------
Q 000522 262 --------------------------------C----------------------------------------------- 262 (1445)
Q Consensus 262 --------------------------------~----------------------------------------------- 262 (1445)
+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (1560)
T PTZ00243 138 SSRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSST 217 (1560)
T ss_pred cccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeeccc
Confidence 0
Q ss_pred ----------CCCCchHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC-CchHHHHHHHHHHHHHHH
Q 000522 263 ----------NCTNPSLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGS-GHLDGYVLAIALGLTSIL 331 (1445)
Q Consensus 263 ----------~~~~~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~-~~~~g~~l~~~l~~~~~~ 331 (1445)
.++..+|+++++++|++.++..++++++.+++.+++|++++.++++++++. ....|+++++++++++++
T Consensus 218 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~~ 297 (1560)
T PTZ00243 218 GSVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQLI 297 (1560)
T ss_pred ccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHH
Confidence 012348999999999999999999999999999999999999999997633 334578889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccC--CCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 332 KSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERS--EFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVA 409 (1445)
Q Consensus 332 ~~~~~~~~~~~~~r~~~~ir~~L~~~iy~K~L~l~~~~~~--~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~ 409 (1445)
++++.++|.|...+.+.++|++|...||+|+++++..+.. +.++|+++|+|++|++++..+..++|.+|.+|++++++
T Consensus 298 ~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li~~ 377 (1560)
T PTZ00243 298 QSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLLLS 377 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887654 56889999999999999999999999999999999999
Q ss_pred HHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHH
Q 000522 410 LYLLYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSS 489 (1445)
Q Consensus 410 ~~lL~~~lg~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~ 489 (1445)
+++||+.+|+++++|++++++++|++.++++++.+.++++++++|+|++.++|+++|||+||+||||+.|.+++++.|++
T Consensus 378 ~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~ 457 (1560)
T PTZ00243 378 ILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRAR 457 (1560)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 490 EVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRL 569 (1445)
Q Consensus 490 El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri 569 (1445)
|++.+++..+..++..++++.+|.++.+++|++|.+.++.||++.+||++++|++++.|+.++|..++.+.++++|++||
T Consensus 458 El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI 537 (1560)
T PTZ00243 458 ELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRI 537 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCcchh----hhh-----hcCCCCcc----cCC----------------------------------CccCCCC
Q 000522 570 TRFLGCSEYKHE----LEQ-----AANSPSYI----SNG----------------------------------LSNFNSK 602 (1445)
Q Consensus 570 ~~fL~~~e~~~~----~~~-----~~~~~~~~----~~~----------------------------------~~~~~~~ 602 (1445)
++||+.+|.... ... ....+... ... .......
T Consensus 538 ~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (1560)
T PTZ00243 538 STFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHP 617 (1560)
T ss_pred HHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccc
Confidence 999987763210 000 00000000 000 0000011
Q ss_pred CceEEEEccEEecccCCc----------------------------------cccccceeeeeeEeeCCCEEEEEcCCCC
Q 000522 603 DMAVIMQDATCSWYCNNE----------------------------------EEQNVVLNQVSLCLPKGSLVAVIGEVGS 648 (1445)
Q Consensus 603 ~~~i~~~~~~f~w~~~~~----------------------------------~~~~~~l~~i~l~i~~G~~~~ivG~~Gs 648 (1445)
...+.++|++|+|+.... ...+++|+|+||++++|++++|+|||||
T Consensus 618 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGs 697 (1560)
T PTZ00243 618 SPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGS 697 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCC
Confidence 234667777777642100 0123479999999999999999999999
Q ss_pred cHHHHHHHHhcCccCCCeEEEEcCeEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCccccc
Q 000522 649 GKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIG 728 (1445)
Q Consensus 649 GKStll~~l~g~~~~~~G~i~~~~~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg 728 (1445)
||||||++|+|+++|++|+|.++++||||+|+||++++||+|||.|+.++|+++|++++++|+|++|++.+|+|++|.+|
T Consensus 698 GKSTLL~~i~G~~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~ 777 (1560)
T PTZ00243 698 GKSTLLQSLLSQFEISEGRVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETEIG 777 (1560)
T ss_pred cHHHHHHHHhcCCCCCCcEEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHHhc
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeC
Q 000522 729 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 808 (1445)
Q Consensus 729 ~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~ 808 (1445)
++|.+|||||||||+||||+|++|++||||||||+||++++++++++++.+ ..+++|+|++||+++.++.||+|++|++
T Consensus 778 ~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~-~~~~~TvIlvTH~~~~~~~ad~ii~l~~ 856 (1560)
T PTZ00243 778 EKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLG-ALAGKTRVLATHQVHVVPRADYVVALGD 856 (1560)
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHH-hhCCCEEEEEeCCHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999987665 4568999999999999999999999999
Q ss_pred CEEEEecCHhHHHhccccCcccccccc---h--hhhhhhh--hhhcccc---c-h---hhhhhh-hhcccccCCchhhHH
Q 000522 809 GQVKWIGSSADLAVSLYSGFWSTNEFD---T--SLHMQKQ--EMRTNAS---S-A---NKQILL-QEKDVVSVSDDAQEI 873 (1445)
Q Consensus 809 G~i~~~g~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~--~~~~~~~---~-~---~~~~~~-~~~~~~~~~~~~~~~ 873 (1445)
|++.++|+++++.+... +........ . ......+ ..+.... . . ..+... ...+...........
T Consensus 857 G~i~~~G~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 935 (1560)
T PTZ00243 857 GRVEFSGSSADFMRTSL-YATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAAGRL 935 (1560)
T ss_pred CEEEEecCHHHHHhChH-HHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccchh
Confidence 99999999999875421 111111000 0 0000000 0000000 0 0 000000 000000000112234
Q ss_pred HHHHHHhcCccchhhHHHHHhhhhHHH-HHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHH
Q 000522 874 IEVEQRKEGRVELTVYKNYAKFSGWFI-TLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFN 952 (1445)
Q Consensus 874 ~~~e~~~~g~v~~~~y~~y~~~~g~~~-~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~ 952 (1445)
.++|+++.|.++|++|++|++..|... ++.++++.++.+++..++++|+++|++... ......|+++|+++.++.
T Consensus 936 ~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~----~~~~~~~l~~y~~~~~~~ 1011 (1560)
T PTZ00243 936 MTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSF----KLSAATYLYVYLGIVLLG 1011 (1560)
T ss_pred hhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----CCCcccHHHHHHHHHHHH
Confidence 566777889999999999999876443 344444455667788889999999987431 122346788888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhh
Q 000522 953 SFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAV 1032 (1445)
Q Consensus 953 ~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~ 1032 (1445)
.++.+++.+.....+.++++++|++++++++++|++|||++|+|+++|||++|++.+|+.++..+..++..++.+++.++
T Consensus 1012 ~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li 1091 (1560)
T PTZ00243 1012 TFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSIL 1091 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777888999999999999999999999999999999999999999999999999999999999988888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHH
Q 000522 1033 VLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQ 1112 (1445)
Q Consensus 1033 ~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~ 1112 (1445)
++++..|+++++++|+.++++.++++|.+.+|++++.+..+++|+++++.|+++|+.|||+||+++.|.+++.+..|.+.
T Consensus 1092 ~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~ 1171 (1560)
T PTZ00243 1092 VTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVY 1171 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 88888898888888888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 1113 RTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVS 1192 (1445)
Q Consensus 1113 ~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~s 1192 (1445)
++.+.....++|+..+++++..+++.+++++.+..... ..+..++|.++++++|+..+..+++++++.+.++|+.++|
T Consensus 1172 ~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s 1249 (1560)
T PTZ00243 1172 SCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTML--RATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNS 1249 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998876554444333322110 0122468899999999999999999999999999999999
Q ss_pred HHHHHHhhcC-Ccccccc-------------------------CCCCC---CCCCCCccEEEEEEEEEeCCCCCccceee
Q 000522 1193 LERVLEYMDV-PQEELCG-------------------------YQSLS---PDWPFQGLIEFQNVTMRYKPSLPAALHDI 1243 (1445)
Q Consensus 1193 v~Ri~~~~~~-~~e~~~~-------------------------~~~~~---~~wp~~g~I~f~nVs~~Y~~~~~~vL~~i 1243 (1445)
++|+.+|.+. |+|+... ...++ +.||..|.|+|+||+|+|+++.++||+||
T Consensus 1250 ~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~v 1329 (1560)
T PTZ00243 1250 VERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGV 1329 (1560)
T ss_pred HHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecc
Confidence 9999999964 3332100 01111 23556799999999999988777899999
Q ss_pred eEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCCC
Q 000522 1244 NFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM 1323 (1445)
Q Consensus 1244 sl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~ 1323 (1445)
||+|+||||||||||||||||||+++|+|+|+|++|+|.|||+||++++++++|++|++|||||+||+||||+||||+++
T Consensus 1330 sf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~ 1409 (1560)
T PTZ00243 1330 SFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLE 1409 (1560)
T ss_pred eEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccC-CCEEEEeccccCCCHHHHHHHHHHH
Q 000522 1324 NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKS-SKVLCLDECTANVDAQTASILQNAI 1400 (1445)
Q Consensus 1324 ~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~-~~ILlLDEaTS~lD~~te~~Iq~~I 1400 (1445)
++|+|+|+|+++||++++++++ ||||.++|+|.|||||||||||||||||++ |+|||||||||+||++||+.||++|
T Consensus 1410 ~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L 1489 (1560)
T PTZ00243 1410 ASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATV 1489 (1560)
T ss_pred CCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHH
Confidence 9999999999999999999998 999999999999999999999999999996 8999999999999999999999999
Q ss_pred HHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1401 SSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1401 ~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++.|++||||+||||++++.+||+|+|||+|+|+|+|+|+|+
T Consensus 1490 ~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eL 1531 (1560)
T PTZ00243 1490 MSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPREL 1531 (1560)
T ss_pred HHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999999886
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.9e-144 Score=1358.62 Aligned_cols=1141 Identities=21% Similarity=0.256 Sum_probs=838.1
Q ss_pred hHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhccCCC-c-----hHHHHHHHHHHHHHHHHHHH-HH
Q 000522 268 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLN---KLIKFLQQGSG-H-----LDGYVLAIALGLTSILKSFF-DT 337 (1445)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~---~li~~~~~~~~-~-----~~g~~l~~~l~~~~~~~~~~-~~ 337 (1445)
++++-+..+-++++++..+..+...+....+|++.- .+.+.+....+ . ..-.++.+.+.+..++.+++ ..
T Consensus 14 ~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~~~lg~~~~~~~~~q~~ 93 (1228)
T KOG0055|consen 14 SFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYFVYLGVGVFISGFIQVS 93 (1228)
T ss_pred chHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444445566777777777777777888887543 33333332111 1 11111111222222222222 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
Q 000522 338 QYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-----SFHDAWSLPFQIGVALYL 412 (1445)
Q Consensus 338 ~~~~~~~r~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-----~~~~~~~~p~~i~i~~~l 412 (1445)
.+.+...|...++|......+ ||...+.++....|++.+-|+.|+++|++++. ++|.+-....-++++++.
T Consensus 94 c~~~~geRq~~riR~~yl~~i----LrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~ 169 (1228)
T KOG0055|consen 94 CWMRTGERQTARIRSKYLKAI----LRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYY 169 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HhCccceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 466777788888887776666 45566666666779999999999999998643 334333333333443333
Q ss_pred HhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHH
Q 000522 413 LYTQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVK 492 (1445)
Q Consensus 413 L~~~lg~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~ 492 (1445)
.|++. ++.+.+..+++.....+++.+.+...+.+++..+.-+...|++++||+|-.|+.|+...++..+.-+.-.+
T Consensus 170 -~W~Lt---lv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k 245 (1228)
T KOG0055|consen 170 -GWKLT---LVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALK 245 (1228)
T ss_pred -HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHH
Confidence 33333 33444444455556777888888888888888899999999999999999999999888887665443334
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 493 HLSTRKYLDAWCVFFW--ATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLT 570 (1445)
Q Consensus 493 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~ 570 (1445)
...+......+...+. .........+|||..++..+..+++++|+.+...-.-...|.+....++.+..|+++..+|.
T Consensus 246 ~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~ 325 (1228)
T KOG0055|consen 246 FGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIF 325 (1228)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHH
Confidence 4333333333332221 22223445688887777788899999999886666666778888899999999999999999
Q ss_pred HHhCCCCcchhhhhhcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcH
Q 000522 571 RFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGK 650 (1445)
Q Consensus 571 ~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGK 650 (1445)
+-++....-+.... ++. ......+.|+++|+.|+||++++ .++|+|+||+|++|+.+++||||||||
T Consensus 326 ~~i~~~~~i~~~~~---------~~~-~~~~~~g~ief~nV~FsYPsRpd---v~Il~g~sl~i~~G~~valVG~SGsGK 392 (1228)
T KOG0055|consen 326 ETIDRKPSIDPYSK---------GGR-VLSSIKGEIEFRNVCFSYPSRPD---VKILKGVSLKIPSGQTVALVGPSGSGK 392 (1228)
T ss_pred HHhcCCCCCCcccc---------cCC-cccccccceEEEEEEecCCCCCc---chhhCCeEEEeCCCCEEEEECCCCCCH
Confidence 98865432221100 000 11235678999999999998754 345999999999999999999999999
Q ss_pred HHHHHHHhcCccCCCeEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCCC-ChhhHHHHHHHhcchHHH
Q 000522 651 SSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDI 716 (1445)
Q Consensus 651 Stll~~l~g~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~d~ 716 (1445)
||++++|.|.|+|++|+|.++| +||.|.|+|.||++||+|||.||+|. +.++..++++....++.+
T Consensus 393 ST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi 472 (1228)
T KOG0055|consen 393 STLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFI 472 (1228)
T ss_pred HHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHH
Confidence 9999999999999999999997 59999999999999999999999864 678888889888999999
Q ss_pred hhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchh
Q 000522 717 SLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA 796 (1445)
Q Consensus 717 ~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~ 796 (1445)
..+|+|++|.+||+|..|||||||||||||||.++|+||||||||||||++.++.+ +.++.. ..+|+|.|+|+||++.
T Consensus 473 ~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~V-q~ALd~-~~~grTTivVaHRLSt 550 (1228)
T KOG0055|consen 473 LKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVV-QEALDK-ASKGRTTIVVAHRLST 550 (1228)
T ss_pred HhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHH-HHHHHH-hhcCCeEEEEeeehhh
Confidence 99999999999999999999999999999999999999999999999999976654 454654 7789999999999999
Q ss_pred hhhCCEEEEEeCCEEEEecCHhHHHhccccCcccccccchhhhhhh-hh----hhccccch--hhhhhhhhccc--ccCC
Q 000522 797 ISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQK-QE----MRTNASSA--NKQILLQEKDV--VSVS 867 (1445)
Q Consensus 797 l~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~--~~~~~~~~~~~--~~~~ 867 (1445)
+++||+|++|++|+|+|.|+|+||++..+.+.++.+.++.....+. ++ .+....+. ........... ....
T Consensus 551 IrnaD~I~v~~~G~IvE~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~~~s~~~~~~~~~~~~~~~~ 630 (1228)
T KOG0055|consen 551 IRNADKIAVMEEGKIVEQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKEERSRSLKSSSSSPSLSRGSNRSNLL 630 (1228)
T ss_pred hhccCEEEEEECCEEEEecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhhhhhhccccccccccccCCccccccc
Confidence 9999999999999999999999999888777665422211110000 00 00000000 00000000000 0000
Q ss_pred --chhhHHHHHHHHhcCccchhhHHHHHhh--hhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCC---CCcchhH
Q 000522 868 --DDAQEIIEVEQRKEGRVELTVYKNYAKF--SGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQ---TKYSTSF 940 (1445)
Q Consensus 868 --~~~~~~~~~e~~~~g~v~~~~y~~y~~~--~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~---~~~~~~~ 940 (1445)
+..++..++...++. ....++.-++. ..|..+++..+..++..+....-.+.+++..+...... .......
T Consensus 631 ~~~~~~e~~~~~~~~~~--~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~ 708 (1228)
T KOG0055|consen 631 SVKPEGEDPEEPVSEED--EKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRA 708 (1228)
T ss_pred ccccccccccccccccc--ccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHH
Confidence 000000000000001 11122233331 25666666655555555444443444443332211111 1122345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc--CChhHHHHHHHhhHHHHhhhhHHHHH
Q 000522 941 YLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQ--TPGGRILNRFSSDLYMIDDSLPFILN 1018 (1445)
Q Consensus 941 ~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~--~~~G~ilnRfs~D~~~id~~l~~~l~ 1018 (1445)
|..+|++++++..+..++..+++.+++.+...++|.++|++++++++.|||. +. |.|.+|+++|...+...+...+.
T Consensus 709 ~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~ 787 (1228)
T KOG0055|consen 709 WALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLS 787 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999996 56 99999999999999999988888
Q ss_pred HHHHHHHhHHHhhhhHHHHHHHH---HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhcchhHhHHHHhhccHHHHHhc
Q 000522 1019 ILLANFVGLLGIAVVLSYVQVFF---LLLLVPFWFIYSKLQFFYRS-TSRELRRLDSVSRSPIYASFTETLNGSSTIRAF 1094 (1445)
Q Consensus 1019 ~~~~~~~~~l~~~~~~~~~~~~~---~~~~~pl~~~~~~i~~~y~~-~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf 1094 (1445)
.++..+..++..+++.++..|-+ .+++.|++++..+.+..+.. .+++.+....+ ......|++.+++||++|
T Consensus 788 ~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~e----a~~iA~eai~NIrTV~al 863 (1228)
T KOG0055|consen 788 LVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEE----ASKIAIEAVSNIRTVAAL 863 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHH----HHHHHHHHHHhHHHHHHH
Confidence 88888877777766666666654 45667777776666655443 33333332222 224678999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHH
Q 000522 1095 KSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVS 1174 (1445)
Q Consensus 1095 ~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~ 1174 (1445)
+.|++|.+.|.+.++...+..... ..|.++...+-..++.+.-++....+... ...+..++..+..++..+..-..
T Consensus 864 ~~e~~~~~~y~~~l~~p~~~~~~~---~~i~gl~f~~sqs~~~~~~A~~f~~G~~L-i~~g~~~~~~~~~vf~~l~~ta~ 939 (1228)
T KOG0055|consen 864 CAEEKFMELYKEELEKPRKSSFKR---GLISGLGFGFSQSLLFFVYALSFWYGARL-ISNGEMTFEDVFRVFMALSFTAM 939 (1228)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HhcCCcCHHHHHHHHHHHHHHHH
Confidence 999999999999888877766554 34444444443333333322222222111 11234455555544444444445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEeCCC-CCccceeeeEEEeCCcEE
Q 000522 1175 LLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQV 1253 (1445)
Q Consensus 1175 ~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~Gekv 1253 (1445)
.+.......++..++..|+.+++++++.+++-...........+.+|+|+|+||+|+||.. ..+||+|+||+|++||++
T Consensus 940 ~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTv 1019 (1228)
T KOG0055|consen 940 ALGQASSYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTV 1019 (1228)
T ss_pred HHHHHHhhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEE
Confidence 6677888889999999999999999988764321111111112368999999999999743 237999999999999999
Q ss_pred EEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCC-CCChHHHHHH
Q 000522 1254 GIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSV 1332 (1445)
Q Consensus 1254 gIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~-~~sd~ei~~a 1332 (1445)
|+||||||||||++.+|.|+|+|.+|.|.|||+||+++++++||++|++|+|||.||++||||||.++. +.+.+||.+|
T Consensus 1020 ALVG~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~A 1099 (1228)
T KOG0055|consen 1020 ALVGPSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEA 1099 (1228)
T ss_pred EEECCCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999983 4699999999
Q ss_pred HHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEE
Q 000522 1333 LEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVI 1410 (1445)
Q Consensus 1333 L~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI 1410 (1445)
++.++.++||.++ ||||.|||+|.+||||||||||||||++|||||||||||||+||.++|+.+|+++++...+||+|
T Consensus 1100 ak~ANaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~I 1179 (1228)
T KOG0055|consen 1100 AKLANAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTI 1179 (1228)
T ss_pred HHHhhhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEE
Confidence 9999999999999 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1411 TIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1411 ~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|||||+||++||.|+|+++|+|+|.|+|+++
T Consensus 1180 vIAHRLSTIqnaD~I~Vi~~G~VvE~GtH~~L 1211 (1228)
T KOG0055|consen 1180 VIAHRLSTIQNADVIAVLKNGKVVEQGTHDEL 1211 (1228)
T ss_pred EEecchhhhhcCCEEEEEECCEEEecccHHHH
Confidence 99999999999999999999999999999987
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=4.3e-132 Score=1345.50 Aligned_cols=1145 Identities=17% Similarity=0.201 Sum_probs=832.7
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1445)
Q Consensus 269 l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~ 348 (1445)
+++-..+.+++.++.+.++.++..++....|+++.++++.+..... ...++..++++.++..++...+.+...+++.
T Consensus 50 ~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 126 (1466)
T PTZ00265 50 PFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGEN---VNDIIFSLVLIGIFQFILSFISSFCMDVVTT 126 (1466)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333344566667777788888888888899999999987642211 1223334444555566667777788889999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---hhHhHHHHHHH
Q 000522 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLL---YTQVKFAFVSG 424 (1445)
Q Consensus 349 ~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~p~~i~i~~~lL---~~~lg~a~l~~ 424 (1445)
++...+...+|+|.++++...++....|++.|.++.|++.+...+ ..+..+...++.++.++.++ .+.+.+.++
T Consensus 127 ~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv~l-- 204 (1466)
T PTZ00265 127 KILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLCIT-- 204 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH--
Confidence 999999999999999999988888888999999999999988765 33445555555544443332 233333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 425 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 504 (1445)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 504 (1445)
+++.+++.+..++.+++.+..++..+..++..+.+.|.++||++||.|+.|+.+.+++.+..++..+...+.....++.
T Consensus 205 -~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~ 283 (1466)
T PTZ00265 205 -CVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLH 283 (1466)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444455677888888888888888999999999999999999999999999998876544444444444444443
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHhCC--------CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Q 000522 505 VFFWATT--PTLFSLFTFGLFALMGH--------QLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLG 574 (1445)
Q Consensus 505 ~~~~~~~--~~~~~~~~f~~~~~~~~--------~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~ 574 (1445)
..+.... ...+.++++|.+.+..+ .++++.+++.+........++..+...+..+..+.+|.+||.+.++
T Consensus 284 ~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~ 363 (1466)
T PTZ00265 284 IGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIIN 363 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2222222 22345677888877653 5788888876655444445566666678899999999999999997
Q ss_pred CCCcchhhhhhcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHH
Q 000522 575 CSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLL 654 (1445)
Q Consensus 575 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll 654 (1445)
.++..+.. . .... . +....|+++|++|+|+..++ .++|+|+||+|++||+++|+||||||||||+
T Consensus 364 ~~~~~~~~-~-~~~~---------~-~~~~~I~~~nVsf~Y~~~~~---~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl 428 (1466)
T PTZ00265 364 RKPLVENN-D-DGKK---------L-KDIKKIQFKNVRFHYDTRKD---VEIYKDLNFTLTEGKTYAFVGESGCGKSTIL 428 (1466)
T ss_pred CCCCCCCC-C-CCcc---------C-CCCCcEEEEEEEEEcCCCCC---CceeccceEEEcCCCEEEEECCCCCCHHHHH
Confidence 65321110 0 0000 0 11136999999999975322 3469999999999999999999999999999
Q ss_pred HHHhcCccCCCeEEEEc-C-------------eEEEEcCCCCCCCccHHHHHhcCCC-----------------------
Q 000522 655 NSILGEMMLTHGSIHAS-G-------------SIAYVPQVPWILSGTIRDNILFGKN----------------------- 697 (1445)
Q Consensus 655 ~~l~g~~~~~~G~i~~~-~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~----------------------- 697 (1445)
++|+|.++|++|+|.++ | +||||+|+|.+|++||+|||.+|..
T Consensus 429 ~lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (1466)
T PTZ00265 429 KLIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENK 508 (1466)
T ss_pred HHHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccc
Confidence 99999999999999994 3 4899999999999999999998741
Q ss_pred -----------------------------------CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000522 698 -----------------------------------YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1445)
Q Consensus 698 -----------------------------------~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv 742 (1445)
.+++...++++.+++++.+..+|+|++|.+|++|.+|||||||||
T Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRi 588 (1466)
T PTZ00265 509 NKRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRI 588 (1466)
T ss_pred cccccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHH
Confidence 223567778888899999999999999999999999999999999
Q ss_pred HHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc--CCceEEEEccCchhhhhCCEEEEEeCC-----------
Q 000522 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM--LQKTRILCTHNVQAISAADMVVVMDKG----------- 809 (1445)
Q Consensus 743 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~--~~~t~ilvth~~~~l~~~d~i~~l~~G----------- 809 (1445)
+||||++++|+|||||||||+||+++++.+.+. +.. +. +|+|+|+|||+++.+..||+|++|++|
T Consensus 589 aIARAll~~P~ILlLDEpTSaLD~~se~~i~~~-L~~-~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~ 666 (1466)
T PTZ00265 589 SIARAIIRNPKILILDEATSSLDNKSEYLVQKT-INN-LKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDII 666 (1466)
T ss_pred HHHHHHhcCCCEEEEeCcccccCHHHHHHHHHH-HHH-HhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccc
Confidence 999999999999999999999999999988876 433 32 479999999999999999999999986
Q ss_pred ------------------------------------EEEEecCHhHHHh-ccccCcccccccchhhhhh-----hhhh--
Q 000522 810 ------------------------------------QVKWIGSSADLAV-SLYSGFWSTNEFDTSLHMQ-----KQEM-- 845 (1445)
Q Consensus 810 ------------------------------------~i~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~-- 845 (1445)
+|+++|+++|+++ .++.+..+.+......... ....
T Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~ 746 (1466)
T PTZ00265 667 GEDPTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDM 746 (1466)
T ss_pred cccccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcccccccccccccccccc
Confidence 5999999999997 4555554432211000000 0000
Q ss_pred hccc--cch-h---hhhhh---hhcc------cccCCchh-hHHHHH------HHH-hcCc-c--chhhHHHHHhhhhHH
Q 000522 846 RTNA--SSA-N---KQILL---QEKD------VVSVSDDA-QEIIEV------EQR-KEGR-V--ELTVYKNYAKFSGWF 899 (1445)
Q Consensus 846 ~~~~--~~~-~---~~~~~---~~~~------~~~~~~~~-~~~~~~------e~~-~~g~-v--~~~~y~~y~~~~g~~ 899 (1445)
+... ... . .+... .+.. .....++. .+...+ +.. +... . .+..+..++....+.
T Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 826 (1466)
T PTZ00265 747 KSSAYKDSERGYDPDEMNGNSKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKD 826 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHH
Confidence 0000 000 0 00000 0000 00000000 000000 000 0000 1 111122233222222
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHhhhhhcccCC-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 900 ITLVICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTL 978 (1445)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~l 978 (1445)
.++.++++++..++....++.++.+.+.... .........|.+++++++++..++.+++.++..+.+.+...+++.++
T Consensus 827 -~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~l 905 (1466)
T PTZ00265 827 -VTIIALSILVAGGLYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRL 905 (1466)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222233444445555555666666542211 00111234567777778888888889999999999999999999999
Q ss_pred HHHHhcCccccccc--CChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 979 LTKIVNAPVLFFDQ--TPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQ 1056 (1445)
Q Consensus 979 l~~ll~~p~~ff~~--~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~ 1056 (1445)
+++++++|++|||+ +++|++++|+++|++.+...+...+..++..++.+++.++++++..|.++++++|+.++.....
T Consensus 906 f~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~ 985 (1466)
T PTZ00265 906 FENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVF 985 (1466)
T ss_pred HHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999996 8899999999999999999888888888888888877777777778877666655544332221
Q ss_pred HHHHH--HHHHHHHH-------------HHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 1057 FFYRS--TSRELRRL-------------DSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTA 1121 (1445)
Q Consensus 1057 ~~y~~--~sr~l~~l-------------~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~ 1121 (1445)
....+ ..++.++. +.+..+.....+.|+++|++|||+|+.|+++.+++.+..+...+........
T Consensus 986 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1065 (1466)
T PTZ00265 986 AIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLV 1065 (1466)
T ss_pred HHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11111 11111111 1222345667899999999999999999999999999988887766655444
Q ss_pred HhhHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000522 1122 SLWLSLRLQLLAAFIISFIATM-AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM 1200 (1445)
Q Consensus 1122 ~~wl~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~ 1200 (1445)
..++....+.+..+...++..+ ..+. ..+..+.|.+..++.+.+.....+..+...+.+++.+..|.+|+.+++
T Consensus 1066 ~~~~~~~~~~~~~~~~~~~~~~G~~lv-----~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll 1140 (1466)
T PTZ00265 1066 NSMLWGFSQSAQLFINSFAYWFGSFLI-----RRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLI 1140 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333322221111111 1111 123456666655554444444456778888999999999999999999
Q ss_pred cCCcccccc-CCCCC--CCCCCCccEEEEEEEEEeCCC-CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC
Q 000522 1201 DVPQEELCG-YQSLS--PDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI 1276 (1445)
Q Consensus 1201 ~~~~e~~~~-~~~~~--~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~ 1276 (1445)
+.+++.... ....+ ...+..|.|+|+||+|+|++. ..+||+|+||+|+|||++||||+||||||||+++|+|+|+|
T Consensus 1141 ~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp 1220 (1466)
T PTZ00265 1141 IRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDL 1220 (1466)
T ss_pred CCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCC
Confidence 876542111 11111 012346889999999999743 34799999999999999999999999999999999999999
Q ss_pred ------------------------------------------------------CCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1277 ------------------------------------------------------CGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1277 ------------------------------------------------------~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++|+|+|||+||+++++++||++|+|
T Consensus 1221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~ 1300 (1466)
T PTZ00265 1221 KNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSI 1300 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccE
Confidence 69999999999999999999999999
Q ss_pred EcCCCcccCccHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000522 1303 VPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1445)
Q Consensus 1303 VpQdp~lF~gTIReNLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1445)
|||||+||+|||||||.++. +.+|+|+++|++.++++++|.++ ||||.|||+|.+|||||||||||||||+|+|+||
T Consensus 1301 V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~IL 1380 (1466)
T PTZ00265 1301 VSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKIL 1380 (1466)
T ss_pred eCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999884 47999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhhcCEEEEEeC----CeE-eeecCCCCC
Q 000522 1380 CLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDH----GHL-PHCGCAAAP 1442 (1445)
Q Consensus 1380 lLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~----G~v-vE~G~p~~~ 1442 (1445)
|||||||+||++||+.|+++|++.. +++|+|+||||++++++||+|+||++ |++ +|.|+|+|+
T Consensus 1381 LLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eL 1450 (1466)
T PTZ00265 1381 LLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEEL 1450 (1466)
T ss_pred EEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHH
Confidence 9999999999999999999999873 69999999999999999999999999 995 599999886
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.2e-87 Score=799.39 Aligned_cols=546 Identities=26% Similarity=0.358 Sum_probs=441.8
Q ss_pred hhhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCC-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 886 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFA 964 (1445)
Q Consensus 886 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~ 964 (1445)
+...+.|.+.-.+++...+++ .++......+-+.++...++.... ............+..++.++.+++..++.+++.
T Consensus 135 ~~rl~~l~~~~~~~l~~a~~~-l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~ 213 (716)
T KOG0058|consen 135 LKRLLGLLKPEWKWLVAAFVL-LLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQ 213 (716)
T ss_pred HHHHHHHhchhHHHHHHHHHH-HHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555544444443322 223333344445555444332211 111122233455667777888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHH-
Q 000522 965 FGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLL- 1043 (1445)
Q Consensus 965 ~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~- 1043 (1445)
+.+.+...+++..+|++++++.++|||.+.+|++++|++.|...+.+.++..+...+.+.+..++.+..+++.+|-+.+
T Consensus 214 ~a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv 293 (716)
T KOG0058|consen 214 YAGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLV 293 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988888886543
Q ss_pred --HHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 1044 --LLVPFW-FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELT 1120 (1445)
Q Consensus 1044 --~~~pl~-~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~ 1120 (1445)
+.+|++ ++...+.++|++.+++.+. +-+.......|.+++++|||+|+.|+...++|.+.+++..+...+...
T Consensus 294 ~~i~~P~v~~~~~~yG~~~rklS~~~Q~----a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~ 369 (716)
T KOG0058|consen 294 TLIVVPIVALVAKIYGKYLRKLSKQTQD----ALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAV 369 (716)
T ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334443 3444555666666666654 344456778999999999999999999999999888877666544333
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000522 1121 ASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM 1200 (1445)
Q Consensus 1121 ~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~ 1200 (1445)
..-.+....++...+.... +..++.+ ....+.+++|.+...+.|...+...+.++...++++.+..+|.+|++|++
T Consensus 370 a~~~f~~~~~~~~~~~~~s---iL~~Gg~-Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~ 445 (716)
T KOG0058|consen 370 AYGIFFGSTNLLGNLAVLS---ILFYGGH-LVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELM 445 (716)
T ss_pred HhhHhHhHHHHHHhHHHHH---HHHhccc-hhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHh
Confidence 3222222222333221111 1111111 12246678999999999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCCCCccEEEEEEEEEeCCC-CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCc
Q 000522 1201 DVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1279 (1445)
Q Consensus 1201 ~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G 1279 (1445)
|.+|.-.... ...|. ..+|.|+|+||+|+||.. ..+||||+||+|+|||.||+||||||||||++++|+|+|+|++|
T Consensus 446 dr~P~i~~~G-~~~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG 523 (716)
T KOG0058|consen 446 DRKPRIPLTG-TLAPD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSG 523 (716)
T ss_pred ccCCCCCCCC-ccccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCC
Confidence 9877542221 11222 568999999999999754 34799999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCC
Q 000522 1280 QILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGI 1356 (1445)
Q Consensus 1280 ~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~ 1356 (1445)
+|++||+||++++++.||++|++|.|||+||+|||||||.++. ..+||||.+|.++++.++||.++ |+||.|||+|.
T Consensus 524 ~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~ 603 (716)
T KOG0058|consen 524 RILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGS 603 (716)
T ss_pred eEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccc
Confidence 9999999999999999999999999999999999999998875 46899999999999999999999 99999999999
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeee
Q 000522 1357 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHC 1436 (1445)
Q Consensus 1357 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~ 1436 (1445)
+|||||||||||||||+|||+|||||||||+||.++|..||++|.+..+++|||+|||||+||+.+|+|+|+++|+|+|.
T Consensus 604 qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~ 683 (716)
T KOG0058|consen 604 QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEM 683 (716)
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCC
Q 000522 1437 GCAAAP 1442 (1445)
Q Consensus 1437 G~p~~~ 1442 (1445)
|+|+|+
T Consensus 684 G~h~eL 689 (716)
T KOG0058|consen 684 GTHDEL 689 (716)
T ss_pred ccHHHH
Confidence 999987
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4.9e-79 Score=765.03 Aligned_cols=528 Identities=27% Similarity=0.388 Sum_probs=444.7
Q ss_pred HHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000522 905 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 984 (1445)
Q Consensus 905 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ 984 (1445)
++..++.+....++++......|..-..............+++.+++..++.+++.+.+...+.|....+-.++++++++
T Consensus 160 ~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~~~rld~~l~~~~~~hll~ 239 (709)
T COG2274 160 LLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHLGKRLDLELSGRFFRHLLR 239 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHc
Confidence 34555666666677777776666432222222333334456677788889999999999999999999999999999999
Q ss_pred CcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHH----HHHHHHHH
Q 000522 985 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIY----SKLQFFYR 1060 (1445)
Q Consensus 985 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~----~~i~~~y~ 1060 (1445)
.|++||.++++|++++|+ +|++.|.+.+...+...+..+...+..++++.+.+|.++++.+...+++ ...+.+.+
T Consensus 240 Lpl~~f~~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~~l~ 318 (709)
T COG2274 240 LPLSYFEKRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQPLLR 318 (709)
T ss_pred CcHHHccCCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 5788888888877777777776666667777777666544433333322 33344444
Q ss_pred HHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 000522 1061 STSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFI 1140 (1445)
Q Consensus 1061 ~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~ 1140 (1445)
+..++. .+..+...++..|++.|+.|||+.+.|.++..++++..++..+..+.......|.+....++..+...++
T Consensus 319 ~~~~~~----~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~v~i 394 (709)
T COG2274 319 RKTRKL----IEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALILNTIKSLLQQLSSVLI 394 (709)
T ss_pred HHHHHH----HHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444443 3344556789999999999999999999999999999999999999888888887777666665433322
Q ss_pred HHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCC
Q 000522 1141 ATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQ 1220 (1445)
Q Consensus 1141 ~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~ 1220 (1445)
..+.+... ..+..+.|.+....+....+.+++..++..|++++....+.+|+.+.++.|+|+..+. .+...|+.+
T Consensus 395 L~~G~~lV----l~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~~-~~~~~~~~~ 469 (709)
T COG2274 395 LWFGAILV----LEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGDK-TLIHLPKLQ 469 (709)
T ss_pred HHHHHHHH----hcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc-ccccccccC
Confidence 22221110 1345678888888888999999999999999999999999999999999999864332 134456778
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
|.|+|+||+|+|+++.+++|+|+|++|+|||+|||||+||||||||+++|.|+|+|++|+|++||+|+++++++.+|++|
T Consensus 470 g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~dl~~i~~~~lR~~i 549 (709)
T COG2274 470 GEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVDLNDIDLASLRRQV 549 (709)
T ss_pred ceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEeHHhcCHHHHHhhe
Confidence 99999999999999888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCcccCccHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1301 AVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1301 ~~VpQdp~lF~gTIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
+|||||++||+|||||||..++. .+|||+++|++.+|++++|+++ ||||.+||+|.||||||||||+||||+++||+
T Consensus 550 g~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQrlalARaLl~~P~ 629 (709)
T COG2274 550 GYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQRLALARALLSKPK 629 (709)
T ss_pred eEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHHHHHHHHHhccCCC
Confidence 99999999999999999998875 4679999999999999999999 99999999999999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1378 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||||||||||++||+.|++.+.+..++||+|+||||++++++||||+|||+|+|+|.|+|+|+
T Consensus 630 ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~el 694 (709)
T COG2274 630 ILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEEL 694 (709)
T ss_pred EEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999876
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.2e-75 Score=740.92 Aligned_cols=527 Identities=26% Similarity=0.386 Sum_probs=424.3
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000522 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1445)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~ 985 (1445)
++.++........++++....+... ........+...++++.++..++.++..+...+.+.+...+++.++++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 98 (567)
T COG1132 21 LLLLLSALLSLLLPLLIGRIIDALL--ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLLRL 98 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3344444555555555554444321 01112223344455555566666667777777778999999999999999999
Q ss_pred cccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1445)
Q Consensus 986 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~ 1065 (1445)
|+++|++++.|++++|+++|++.++..+......+...++.+++.++++....|.+.+++.....++......+.+..+.
T Consensus 99 ~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~ 178 (567)
T COG1132 99 PLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKSRK 178 (567)
T ss_pred CHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888775555556667777777777777766555544444444444444444466
Q ss_pred HHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000522 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1145 (1445)
Q Consensus 1066 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v 1145 (1445)
..+....+.+.+.+.+.|+++|+++||+|+.++...+++.+..+...+...........+.....++..+....+.....
T Consensus 179 ~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (567)
T COG1132 179 LSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLALGG 258 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666677788999999999999999999999988888888777766665444444433333333333322222111111
Q ss_pred HhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEE
Q 000522 1146 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1225 (1445)
Q Consensus 1146 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1225 (1445)
... ..+..+.|.+...+.+...+..++..+...+..++....|.+|+.++.+.+++...+... ..+..|.|+|
T Consensus 259 ~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~---~~~~~~~I~f 331 (567)
T COG1132 259 FLV----LSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP---LKDTIGSIEF 331 (567)
T ss_pred HHH----HcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC---CCCCCCeEEE
Confidence 110 123356888999999999999999999999999999999999999999986653221111 3455688999
Q ss_pred EEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcC
Q 000522 1226 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1305 (1445)
Q Consensus 1226 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1305 (1445)
+||+|+|++ .+++|+|+||+|+|||++||||||||||||++++|+|+|+|++|+|.|||+||++++.++||++|++|||
T Consensus 332 ~~vsf~y~~-~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Q 410 (567)
T COG1132 332 ENVSFSYPG-KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQ 410 (567)
T ss_pred EEEEEEcCC-CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcc
Confidence 999999975 3579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCccHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000522 1306 SPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1445)
Q Consensus 1306 dp~lF~gTIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1445)
||+||+|||||||+++.+ .+|||+++|++.++++|+++++ ||||.+||+|.+||||||||+|||||++|+|+|||||
T Consensus 411 d~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILD 490 (567)
T COG1132 411 DPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILD 490 (567)
T ss_pred cceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999999999976 6999999999999999999999 9999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1383 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1383 EaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||++|++||+.|++.+++..+++|+|+||||++|+++||+|+|||+|+|+|+|+|+|+
T Consensus 491 EaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eL 550 (567)
T COG1132 491 EATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEEL 550 (567)
T ss_pred ccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999988889999999999999999999999999999999999886
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=9.5e-75 Score=739.32 Aligned_cols=549 Identities=19% Similarity=0.231 Sum_probs=422.1
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCC-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 889 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGS-SQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGS 967 (1445)
Q Consensus 889 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~ 967 (1445)
++.|.+...+..+. .+++.++...+....++.+.+..+.... .........++.+++++.++..++.+++.+.....+
T Consensus 13 l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (588)
T PRK11174 13 LKQQSKPAKRWLNL-SILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAG 91 (588)
T ss_pred HHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455543333222 2234444555555556666555542110 011111223344455566667777788888888899
Q ss_pred HHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHH
Q 000522 968 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1047 (1445)
Q Consensus 968 ~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~p 1047 (1445)
.+...+++.++++++++.|.++|++.++|++++|+++|++.+++.+...+..++..++..++.++++.+.+|.+.++++.
T Consensus 92 ~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~ 171 (588)
T PRK11174 92 QHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLG 171 (588)
T ss_pred HHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999888777777777777777777777777766554433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 000522 1048 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1127 (1445)
Q Consensus 1048 l~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~ 1127 (1445)
...+...+...+.+..++..+...+..+.+.+.+.|.++|+++||+|++|+.+.+++.+..++..+..........+...
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (588)
T PRK11174 172 TAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLSSA 251 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333334444444444444556677889999999999999999999999999998888877776655544444444
Q ss_pred HHHHHHHHHHHHHH-HHHHHhhcCCCCCCc----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 000522 1128 RLQLLAAFIISFIA-TMAVIGSRGNLPATF----STPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV 1202 (1445)
Q Consensus 1128 ~l~~l~~~~~~~~~-~~~v~~~~~~~~~~~----~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~ 1202 (1445)
...++..+.+.++. ...... .+....+. .+.....+++.++..+..++..+...+.++.....+.+|+.++.+.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 330 (588)
T PRK11174 252 VLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTFLET 330 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 44333332221111 111110 11111111 1222233344566677888999999999999999999999999987
Q ss_pred CccccccCCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE
Q 000522 1203 PQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1282 (1445)
Q Consensus 1203 ~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ 1282 (1445)
++++..... .+.+.+..+.|+|+||+|.|.++ +++|+|+||+|+|||++||||+||||||||+++|+|+| |++|+|.
T Consensus 331 ~~~~~~~~~-~~~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~G~I~ 407 (588)
T PRK11174 331 PLAHPQQGE-KELASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQGSLK 407 (588)
T ss_pred CCcccCCCc-cccCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCCcEEE
Confidence 664321111 11111234679999999888654 57999999999999999999999999999999999999 9999999
Q ss_pred ECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCC
Q 000522 1283 VDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFS 1359 (1445)
Q Consensus 1283 IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LS 1359 (1445)
+||+|+++++.+++|++|+||||||++|+|||||||.+++ +.+|+|+++|++.|+++++++++ |+||.+||+|.+||
T Consensus 408 i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G~~LS 487 (588)
T PRK11174 408 INGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQAAGLS 487 (588)
T ss_pred ECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCCCCCC
Confidence 9999999999999999999999999999999999999885 58999999999999999999999 99999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCC
Q 000522 1360 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCA 1439 (1445)
Q Consensus 1360 gGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p 1439 (1445)
|||||||+||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|
T Consensus 488 GGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~e~G~~ 567 (588)
T PRK11174 488 VGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIVQQGDY 567 (588)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEeecCCH
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred CCC
Q 000522 1440 AAP 1442 (1445)
Q Consensus 1440 ~~~ 1442 (1445)
+++
T Consensus 568 ~eL 570 (588)
T PRK11174 568 AEL 570 (588)
T ss_pred HHH
Confidence 876
No 13
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.1e-74 Score=748.60 Aligned_cols=528 Identities=25% Similarity=0.356 Sum_probs=426.6
Q ss_pred HHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000522 904 ICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIV 983 (1445)
Q Consensus 904 ~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll 983 (1445)
.+++.++........+++.....+..............+.+++++.++..++..++.+.+.+.+.+...+++++++++++
T Consensus 166 ~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll 245 (711)
T TIGR00958 166 AFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLRIREDLFRSLL 245 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445555566666677766655532211111112223344555566677777888888889999999999999999999
Q ss_pred cCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 984 NAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTS 1063 (1445)
Q Consensus 984 ~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~s 1063 (1445)
+.|++||+++++|+++||+++|++.+++.+...+..++..++.+++.++++.+.+|.+.++++....+...+.+.+.+..
T Consensus 246 ~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~~~~~~~~~~~ 325 (711)
T TIGR00958 246 RQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVFLAEKVFGKRY 325 (711)
T ss_pred cCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888888888888888888888887766554444444444444444444
Q ss_pred HHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH---hhHHHHHHHHHHHHHHHH
Q 000522 1064 RELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTAS---LWLSLRLQLLAAFIISFI 1140 (1445)
Q Consensus 1064 r~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~---~wl~~~l~~l~~~~~~~~ 1140 (1445)
++..+...+..+...+++.|+++|+++||+|++|+++.+++.+..++..+......... .|....+..+..+++..+
T Consensus 326 ~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 405 (711)
T TIGR00958 326 QLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLGMLIQVLVLYY 405 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444444556667899999999999999999999999999998888776655443322 232222222222222111
Q ss_pred HHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCC
Q 000522 1141 ATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQ 1220 (1445)
Q Consensus 1141 ~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~ 1220 (1445)
....+. .+..+.|.+..++.|...+..++..+...+.++.++..+.+|+.++++.+++...... ...++..
T Consensus 406 g~~lv~-------~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~~~~~ 476 (711)
T TIGR00958 406 GGQLVL-------TGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGT--LAPLNLE 476 (711)
T ss_pred HHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC--CCCCCCC
Confidence 111121 3456788888899999999999999999999999999999999999987665322111 1223557
Q ss_pred ccEEEEEEEEEeCCC-CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcc
Q 000522 1221 GLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1299 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1299 (1445)
|.|+|+||+|+|++. .+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++
T Consensus 477 ~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~lr~~ 556 (711)
T TIGR00958 477 GLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHYLHRQ 556 (711)
T ss_pred CeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHhh
Confidence 889999999999753 3579999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCCCcccCccHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1300 FAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1300 i~~VpQdp~lF~gTIReNLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
|++|||||++|+|||||||.++. ..+|+++++++++++++++++++ |+||.+||+|.+||||||||||||||++++|
T Consensus 557 i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARALl~~p 636 (711)
T TIGR00958 557 VALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARALVRKP 636 (711)
T ss_pred ceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999774 46899999999999999999999 9999999999999999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|||||||||+||++||+.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|+|+|+
T Consensus 637 ~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL 700 (711)
T TIGR00958 637 RVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQL 700 (711)
T ss_pred CEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHH
Confidence 9999999999999999999999 344589999999999999999999999999999999999876
No 14
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=8.4e-74 Score=741.51 Aligned_cols=527 Identities=21% Similarity=0.230 Sum_probs=424.4
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000522 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1445)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~ 985 (1445)
++.++........++.+....+..-..........++.+++++.++..++.+++.+.....+.+...+++..+++++++.
T Consensus 143 ~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~~ 222 (686)
T TIGR03797 143 AMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRMDASLQAAVWDRLLRL 222 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34444455555556655555543211111111222344555666667788888888899999999999999999999999
Q ss_pred cccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1445)
Q Consensus 986 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~ 1065 (1445)
|++||++.++|++++|++ |++.+.+.+...+...+..+...++.++++++.+|.++++++.+.+++..+.....+..+.
T Consensus 223 ~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~ 301 (686)
T TIGR03797 223 PVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVALALVAIAVTLVLGLLQVR 301 (686)
T ss_pred CHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999997 7888888877766666655555566666666777766554444333333333333332233
Q ss_pred HHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000522 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1145 (1445)
Q Consensus 1066 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v 1145 (1445)
..+...+..+...+++.|+++|+.+||+||.|+++.+++.+..++..+..+.....+.|.......+..+...++..+..
T Consensus 302 ~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~ 381 (686)
T TIGR03797 302 KERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVFNAVLPVLTSAALFAAAI 381 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333344556789999999999999999999999999999999988888887777777666555544332222211111
Q ss_pred HhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEE
Q 000522 1146 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1225 (1445)
Q Consensus 1146 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1225 (1445)
... ..+..+.|.+..+..+...+..++..+...+.++.....+.+|+.++++.++|..... . ...+..|.|+|
T Consensus 382 ~lv----~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~-~--~~~~~~~~I~~ 454 (686)
T TIGR03797 382 SLL----GGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK-T--DPGKLSGAIEV 454 (686)
T ss_pred HHH----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc-C--CCCCCCceEEE
Confidence 100 1244678888888888889999999999999999999999999999998776542211 1 11234578999
Q ss_pred EEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcC
Q 000522 1226 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1305 (1445)
Q Consensus 1226 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1305 (1445)
+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|++|||
T Consensus 455 ~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q 534 (686)
T TIGR03797 455 DRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLDVQAVRRQLGVVLQ 534 (686)
T ss_pred EEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCCHHHHHhccEEEcc
Confidence 99999998766789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEec
Q 000522 1306 SPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDE 1383 (1445)
Q Consensus 1306 dp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDE 1383 (1445)
||.+|+|||||||.++++.+|+++++|++.++++++++++ |+||.+||+|.+|||||||||+||||++++|+||||||
T Consensus 535 ~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialARAll~~p~iLiLDE 614 (686)
T TIGR03797 535 NGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIARALVRKPRILLFDE 614 (686)
T ss_pred CCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 9999999999999988778999999999999999999998 99999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1384 CTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1384 aTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||+||++||+.|++.|++. ++|+|+||||++++..||+|+||++|+|+|.|+|+++
T Consensus 615 pTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~L 671 (686)
T TIGR03797 615 ATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDEL 671 (686)
T ss_pred CccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999886 6899999999999999999999999999999999875
No 15
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.7e-73 Score=742.15 Aligned_cols=529 Identities=22% Similarity=0.299 Sum_probs=429.2
Q ss_pred HHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 000522 907 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 986 (1445)
Q Consensus 907 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p 986 (1445)
+.++..+.....++......+.............++..++++.++..++.+++.++....+.+...+++.++++++++.|
T Consensus 162 ~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~ 241 (710)
T TIGR03796 162 AGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIKLAVGMSARFLWHILRLP 241 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 33444445555566666555432111111112233445555666777888888899999999999999999999999999
Q ss_pred ccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 987 VLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSREL 1066 (1445)
Q Consensus 987 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l 1066 (1445)
++||++.++|++++|++.| +.+.+.+...+...+..++.+++.++++++.+|+++++.+...+++..+...+.+..+..
T Consensus 242 ~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~ 320 (710)
T TIGR03796 242 VRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFAAINVLALQLVSRRRVDA 320 (710)
T ss_pred HHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998 568877777777777777777777777777777776655554444444444444444444
Q ss_pred HHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 000522 1067 RRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVI 1146 (1445)
Q Consensus 1067 ~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~ 1146 (1445)
.+......+...+++.|+++|+.+||++|+|+.+.+++.+..++..+..+.......|.......+..+...++..+...
T Consensus 321 ~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~ 400 (710)
T TIGR03796 321 NRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLPTLLTSLNSALILVVGGL 400 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556678899999999999999999999999999988888877777666666666555555444322221111111
Q ss_pred hhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccC----C-CCCCCCCCCc
Q 000522 1147 GSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGY----Q-SLSPDWPFQG 1221 (1445)
Q Consensus 1147 ~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~----~-~~~~~wp~~g 1221 (1445)
. ...+..+.|.+..+..+...+..++..+...+.++.....+.+|+.++++.++|..... . ...+.++..|
T Consensus 401 ~----v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~ 476 (710)
T TIGR03796 401 R----VMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSG 476 (710)
T ss_pred H----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCC
Confidence 0 01244678888888899999999999999999999999999999999998876642211 0 0111134568
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+
T Consensus 477 ~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~~~~lr~~i~ 556 (710)
T TIGR03796 477 YVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFDGIPREEIPREVLANSVA 556 (710)
T ss_pred eEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEeHHHCCHHHHHhhee
Confidence 99999999999876678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCcccCccHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1302 VVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1302 ~VpQdp~lF~gTIReNLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
||||||++|+|||||||.+++ ..+|+++++|++.++++++++++ |+||.+||+|.+|||||||||+||||++++|+|
T Consensus 557 ~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGGQrQRiaLARall~~p~i 636 (710)
T TIGR03796 557 MVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGGQRQRLEIARALVRNPSI 636 (710)
T ss_pred EEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHHHHHHHHHHHHHhhCCCE
Confidence 999999999999999998875 57899999999999999999998 999999999999999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||||||+||++||+.|.+.|++ .++|+|+||||++++.+||||+|||+|+|+|.|+|+++
T Consensus 637 liLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~~L 698 (710)
T TIGR03796 637 LILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHEEL 698 (710)
T ss_pred EEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHHHH
Confidence 999999999999999999999987 58999999999999999999999999999999999875
No 16
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=5e-73 Score=736.80 Aligned_cols=545 Identities=24% Similarity=0.320 Sum_probs=426.4
Q ss_pred hhhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 886 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 965 (1445)
Q Consensus 886 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~ 965 (1445)
+..+..|++...+.+ ...++..++..+.....++++..+.+..-..........+..+++++.++..++.+++.++...
T Consensus 144 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (708)
T TIGR01193 144 LLKFIPLITRQKKLI-VNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNV 222 (708)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444554333322 2233444555556666777777776643211111112223334455556677788888888899
Q ss_pred HHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHH
Q 000522 966 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1045 (1445)
Q Consensus 966 ~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1045 (1445)
.+.+...+++.++++++++.|+.||++.++|++++|++ |.+.+.+.+...+...+..+..+++.++++.+.+|.+++++
T Consensus 223 ~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~ 301 (708)
T TIGR01193 223 LGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFLLS 301 (708)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999998 88888776665555555555555555555666666655444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 000522 1046 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1125 (1445)
Q Consensus 1046 ~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl 1125 (1445)
+..++++..+...+.+..++..+......+...+++.|+++|+.+||+||.|+.+.+++.+..+...+..+.......+.
T Consensus 302 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (708)
T TIGR01193 302 LLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQ 381 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333344444444444455566777889999999999999999999999999888887777666554444333
Q ss_pred HHHHHHHHH---HHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 000522 1126 SLRLQLLAA---FIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV 1202 (1445)
Q Consensus 1126 ~~~l~~l~~---~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~ 1202 (1445)
.....++.. +++.+++...+. .+..+.|.+..+..+...+..++..+...+.++.....+++|+.++.+.
T Consensus 382 ~~~~~~~~~~~~i~il~~g~~lv~-------~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~ 454 (708)
T TIGR01193 382 QAIKAVTKLILNVVILWTGAYLVM-------RGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLV 454 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 333222222 222222222221 3456788888888999999999999999999999999999999999988
Q ss_pred CccccccCCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE
Q 000522 1203 PQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1282 (1445)
Q Consensus 1203 ~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ 1282 (1445)
++|..... .....++..|.|+|+||+|+|++ .+++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|+
T Consensus 455 ~~e~~~~~-~~~~~~~~~~~I~~~~vsf~y~~-~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~ 532 (708)
T TIGR01193 455 DSEFINKK-KRTELNNLNGDIVINDVSYSYGY-GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEIL 532 (708)
T ss_pred CCcccccc-cccCCCCCCCcEEEEEEEEEcCC-CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEE
Confidence 77643221 11123455789999999999974 35799999999999999999999999999999999999999999999
Q ss_pred ECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCC--CCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCC
Q 000522 1283 VDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF--HMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISF 1358 (1445)
Q Consensus 1283 IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~--~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~L 1358 (1445)
+||+|+++++++++|++|+||||||++|+|||||||.++ ...+|++++++++.++++++++++ ||||.++|+|.+|
T Consensus 533 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~L 612 (708)
T TIGR01193 533 LNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSI 612 (708)
T ss_pred ECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCC
Confidence 999999999999999999999999999999999999987 357899999999999999999998 9999999999999
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecC
Q 000522 1359 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGC 1438 (1445)
Q Consensus 1359 SgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~ 1438 (1445)
||||||||+||||++++|+|||||||||+||++||+.+++.|++. +++|+|+||||++++..||+|+||++|+++|.|+
T Consensus 613 SgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~ 691 (708)
T TIGR01193 613 SGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGS 691 (708)
T ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECC
Confidence 999999999999999999999999999999999999999999874 7899999999999999999999999999999999
Q ss_pred CCCC
Q 000522 1439 AAAP 1442 (1445)
Q Consensus 1439 p~~~ 1442 (1445)
|+++
T Consensus 692 ~~~L 695 (708)
T TIGR01193 692 HDEL 695 (708)
T ss_pred HHHH
Confidence 9875
No 17
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=9.4e-73 Score=732.67 Aligned_cols=530 Identities=23% Similarity=0.311 Sum_probs=423.8
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000522 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1445)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~ 985 (1445)
++.++..+.....++.++...+.............+..+++++.++..++.+++.++....+.+...+++..+++++++.
T Consensus 154 ~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ll~l 233 (694)
T TIGR03375 154 IASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGKKADLILSAKLFERVLGL 233 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33444455555566666665553211111111122333444455667778888888999999999999999999999999
Q ss_pred cccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1445)
Q Consensus 986 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~ 1065 (1445)
|++| ++.++|++++|+ +|++.+.+.+...+...+..++.++..++++.+.+|.++++.+..++++..+..++.+..++
T Consensus 234 ~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 311 (694)
T TIGR03375 234 RMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVWVPLVAIPLILLPGLLLQRPLSR 311 (694)
T ss_pred Cccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998 788999999999 79999999887776666666666666666666677766554433333333333333333344
Q ss_pred HHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000522 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1145 (1445)
Q Consensus 1066 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v 1145 (1445)
..+...+..+...+++.|+++|+.+||+|++|+.+.+++.+..++..+..+.....+.+.....+++..+...++..+..
T Consensus 312 ~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~g~ 391 (694)
T TIGR03375 312 LAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATNFAQFIQQLVSVAIVVVGV 391 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444456677789999999999999999999999999999888887777766555555444444433322111111111
Q ss_pred HhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEE
Q 000522 1146 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1225 (1445)
Q Consensus 1146 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1225 (1445)
.. ...+..+.|.+..++.+...+..++..+...+.++.....+.+|+.++++.++|...... .....+..|.|+|
T Consensus 392 ~~----v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~-~~~~~~~~~~I~~ 466 (694)
T TIGR03375 392 YL----ISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGTR-FLHRPRLQGEIEF 466 (694)
T ss_pred HH----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-CCCCCCccceEEE
Confidence 10 012456788888889999999999999999999999999999999999988776422111 1111234678999
Q ss_pred EEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcC
Q 000522 1226 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1305 (1445)
Q Consensus 1226 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1305 (1445)
+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++++++|++++||||
T Consensus 467 ~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l~~~~~~~lr~~i~~v~Q 546 (694)
T TIGR03375 467 RNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDIRQIDPADLRRNIGYVPQ 546 (694)
T ss_pred EEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhccEEECC
Confidence 99999998666789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCccHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000522 1306 SPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1445)
Q Consensus 1306 dp~lF~gTIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1445)
||++|+|||||||.++++ .+|++++++++.++++++++++ |+||.+||+|.+|||||||||+||||++++|+|||||
T Consensus 547 ~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQRlalARall~~p~iliLD 626 (694)
T TIGR03375 547 DPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQAVALARALLRDPPILLLD 626 (694)
T ss_pred ChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999999998865 7999999999999999999999 9999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1383 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1383 EaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||+||++||+.|++.|++..+++|+|+||||++++..||+|+||++|+++|.|+|+|+
T Consensus 627 E~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eL 686 (694)
T TIGR03375 627 EPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQV 686 (694)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 999999999999999999998899999999999999999999999999999999999875
No 18
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.9e-72 Score=718.21 Aligned_cols=528 Identities=23% Similarity=0.339 Sum_probs=417.8
Q ss_pred HHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 905 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYST--SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 982 (1445)
Q Consensus 905 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~--~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~l 982 (1445)
+++.++........++++....+........... ..++.+++++.++..++.+++.+.....+.+...+++.++++++
T Consensus 29 ~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l 108 (592)
T PRK10790 29 VLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMDAA 108 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555566666677777666532111111111 11122344444555666777777888888999999999999999
Q ss_pred hcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 983 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1062 (1445)
Q Consensus 983 l~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~ 1062 (1445)
++.|.++|++.+.|++++|+++|++.+++.+...+..++..+..+++.++++.+.+|++.++++..+.+...+...+.+.
T Consensus 109 ~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~~ 188 (592)
T PRK10790 109 LRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQRY 188 (592)
T ss_pred HcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988888888877777777777777777665443322222111222222222
Q ss_pred HHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHHHHHHHHHHH
Q 000522 1063 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL-SLRLQLLAAFIISFIA 1141 (1445)
Q Consensus 1063 sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl-~~~l~~l~~~~~~~~~ 1141 (1445)
.+...+......+.+..++.|+++|+.+||+||.++++.+++.+..+...+..+.....+.+. .....++..++..++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (592)
T PRK10790 189 STPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGLL 268 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233333333455677889999999999999999999999999887777666655443333222 2222222222111111
Q ss_pred HHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCc
Q 000522 1142 TMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQG 1221 (1445)
Q Consensus 1142 ~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g 1221 (1445)
+ +.+. ...+..+.|.+..++.+...+..++..+...+.++++...+.+|+.++.+.++++.... ..++..+
T Consensus 269 ~--~~~~---~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~----~~~~~~~ 339 (592)
T PRK10790 269 M--LFGF---SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGND----DRPLQSG 339 (592)
T ss_pred H--HHHH---HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCC----ccCCCCC
Confidence 1 1111 11345678888888899999999999999999999999999999999988765432111 1233457
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.|+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++++.+|++|+
T Consensus 340 ~i~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~ 418 (592)
T PRK10790 340 RIDIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVA 418 (592)
T ss_pred eEEEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheE
Confidence 89999999999753 57999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000522 1302 VVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1445)
Q Consensus 1302 ~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1445)
||||||.+|+||||+||.+++..+|++++++++++|++++++++ ||||.++|+|.+|||||||||+||||++++|+||
T Consensus 419 ~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~il 498 (592)
T PRK10790 419 MVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQIL 498 (592)
T ss_pred EEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEE
Confidence 99999999999999999999888999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1380 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1380 lLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||||||+||++|++.|++.|++..++||+|+||||++++..||+|++|++|+++|.|+|+++
T Consensus 499 llDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L 561 (592)
T PRK10790 499 ILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQL 561 (592)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999999999999999998889999999999999999999999999999999999875
No 19
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=4.4e-72 Score=714.46 Aligned_cols=530 Identities=25% Similarity=0.344 Sum_probs=429.2
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000522 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1445)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~ 985 (1445)
++.++..++.....++++...+.............+...++++.++..++.+++.+.....+.+....++..+++++++.
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~~ 111 (582)
T PRK11176 32 VALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKVVMTMRRRLFGHMMGM 111 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 33334444445555566655543211111111111222334455666677777777778888899999999999999999
Q ss_pred cccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1445)
Q Consensus 986 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~ 1065 (1445)
|.++|++.+.|++++|+++|++.+.+.+...+..++..++.+++.++++.+.+|+++++++..+++...+.....+..++
T Consensus 112 ~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~ 191 (582)
T PRK11176 112 PVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAPIVSIAIRVVSKRFRN 191 (582)
T ss_pred CHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888888888888888888877777777776555444444433333344443344
Q ss_pred HHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000522 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1145 (1445)
Q Consensus 1066 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v 1145 (1445)
..+......+.+.+++.|.++|+.+||+||.++.+.+++.+..+...+..........|.....+++..+...++..+..
T Consensus 192 ~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~ 271 (582)
T PRK11176 192 ISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAAS 271 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455677889999999999999999999999999999999988888777766666666666555433222221111
Q ss_pred HhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEE
Q 000522 1146 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1225 (1445)
Q Consensus 1146 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1225 (1445)
... ..+..+.|.+..++++...+..++..+...+.++.....+.+|+.++.+.+++...+.. ...|..+.|+|
T Consensus 272 ~~~----~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~---~~~~~~~~i~~ 344 (582)
T PRK11176 272 FPS----VMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKR---VIERAKGDIEF 344 (582)
T ss_pred HHH----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCc---CCCCCCCeEEE
Confidence 100 12456788888888999999999999999999999999999999999987655321111 11244568999
Q ss_pred EEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcC
Q 000522 1226 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1305 (1445)
Q Consensus 1226 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1305 (1445)
+||+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++|+||||
T Consensus 345 ~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 424 (582)
T PRK11176 345 RNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDYTLASLRNQVALVSQ 424 (582)
T ss_pred EEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhcCHHHHHhhceEEcc
Confidence 99999998766789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCccHHHhcCCCC--CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000522 1306 SPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1381 (1445)
Q Consensus 1306 dp~lF~gTIReNLdp~~--~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1381 (1445)
||++|+|||||||..+. .++|++++++++.++++++++++ ||||.+||+|.+|||||||||+||||++++|+||||
T Consensus 425 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~LARall~~~~ilil 504 (582)
T PRK11176 425 NVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILIL 504 (582)
T ss_pred CceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 99999999999998753 47899999999999999999999 999999999999999999999999999999999999
Q ss_pred eccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1382 DECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1382 DEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||||+||++|++.+.+.|++..+++|+|+||||++++..||+|++|++|+|+|.|+|+++
T Consensus 505 DEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l 565 (582)
T PRK11176 505 DEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAEL 565 (582)
T ss_pred ECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999998889999999999999999999999999999999999875
No 20
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-73 Score=719.33 Aligned_cols=502 Identities=22% Similarity=0.283 Sum_probs=405.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHH
Q 000522 937 STSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFI 1016 (1445)
Q Consensus 937 ~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~ 1016 (1445)
....+...|+.+++...+..++...++.+.+.|...+++.+.+++++|++++|||.+..|++..|++.|++.+.+.+...
T Consensus 69 ~~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geK 148 (1228)
T KOG0055|consen 69 EVSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEK 148 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHH
Confidence 34556777778888888888888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCc
Q 000522 1017 LNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKS 1096 (1445)
Q Consensus 1017 l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~ 1096 (1445)
+..++..+...++.+++.++..|.+.++++++..+.......+.+..-.....+..+.+.--+...|++.+++|+.+|+.
T Consensus 149 vg~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~g 228 (1228)
T KOG0055|consen 149 VGNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNG 228 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcC
Confidence 99999888888887777777777765554443333222222222222222222223333445678999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHH
Q 000522 1097 EDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLL 1176 (1445)
Q Consensus 1097 e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l 1176 (1445)
|+...++|.+.++...|...... .|.++.....-.++....+....++... ......++|.+..++...+.-...+
T Consensus 229 q~~e~~ry~~~L~~~~k~gi~~g---~~~G~~~G~~~~~~~~~~a~~~WyG~~l-i~~~~~~~g~v~~v~~~vl~g~~sL 304 (1228)
T KOG0055|consen 229 EKKEIERYSKALENALKFGIKKG---LFKGLGLGFTFFLLFASYALAFWYGSTL-ILNGGYNGGDVITVFFSVLIGGMSL 304 (1228)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHH---HHHHHHhHHHHHHHHHHHHHHHHHHHHH-HhcCCCCCceEEEEEeehhhhhhhh
Confidence 99999999999988887765432 3333333222222222222222222111 0112344555555555555555667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEeCCCC-CccceeeeEEEeCCcEEEE
Q 000522 1177 GNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSL-PAALHDINFTIEGGTQVGI 1255 (1445)
Q Consensus 1177 ~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~-~~vL~~isl~I~~GekvgI 1255 (1445)
+.....+..+.++.+|..++.+.++..++...........-..+|.|+|+||+|+||... .++|+|+||+|++||.||+
T Consensus 305 gqa~p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~val 384 (1228)
T KOG0055|consen 305 GQASPHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVAL 384 (1228)
T ss_pred hccccchHHHhccccchHHHHHHhcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEE
Confidence 777778888889999999999998765543111111111223579999999999997543 3799999999999999999
Q ss_pred ECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCC-CCChHHHHHHHH
Q 000522 1256 VGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLE 1334 (1445)
Q Consensus 1256 vGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~-~~sd~ei~~aL~ 1334 (1445)
||+|||||||++++|.|+|+|++|+|.|||.|+.+++.++||++||+|.|+|+||++||+|||.++. ..+++|+.+|++
T Consensus 385 VG~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k 464 (1228)
T KOG0055|consen 385 VGPSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAK 464 (1228)
T ss_pred ECCCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999987 468999999999
Q ss_pred HccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEe
Q 000522 1335 KCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITI 1412 (1445)
Q Consensus 1335 ~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~I 1412 (1445)
.++.++++..+ |+||.+||+|.+||||||||+||||||+|+|+|||||||||+||+++|+.+|++|++..+|+|.|+|
T Consensus 465 ~ana~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivV 544 (1228)
T KOG0055|consen 465 AANAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVV 544 (1228)
T ss_pred HccHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEE
Confidence 99999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1413 AHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1413 aHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||+||+++|+|+||++|+|+|.|+|+|+
T Consensus 545 aHRLStIrnaD~I~v~~~G~IvE~G~h~EL 574 (1228)
T KOG0055|consen 545 AHRLSTIRNADKIAVMEEGKIVEQGTHDEL 574 (1228)
T ss_pred eeehhhhhccCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999987
No 21
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.5e-71 Score=653.19 Aligned_cols=497 Identities=24% Similarity=0.329 Sum_probs=424.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHH
Q 000522 938 TSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFIL 1017 (1445)
Q Consensus 938 ~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l 1017 (1445)
...+++.++++.++..++.+.+......++.++...+|.++++++.+.+..+-+..|+|++....+..++.++..+...+
T Consensus 39 l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryL 118 (559)
T COG4988 39 LLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYL 118 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 34556677777788888888888888889999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHhHHHhhhhHHHHHHH---HHHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHHhhcchhHhHHHHhhccHHHHH
Q 000522 1018 NILLANFVGLLGIAVVLSYVQVF---FLLLLVPFWFIYSKLQF-FYR-STSRELRRLDSVSRSPIYASFTETLNGSSTIR 1092 (1445)
Q Consensus 1018 ~~~~~~~~~~l~~~~~~~~~~~~---~~~~~~pl~~~~~~i~~-~y~-~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIr 1092 (1445)
..++.+.+..+.+++.+++..|. ++++..|++.++..+.. .-. ...++. .+...+.+||.|.++|+.|+|
T Consensus 119 Pq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilvg~~a~~~s~~~~-----~~~~~ls~~FLD~LrGL~TLr 193 (559)
T COG4988 119 PQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILVGLAAKDASEKQF-----SALARLSGHFLDRLRGLETLR 193 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH-----HHHHHHHHHHHHHhcChHHHH
Confidence 88888887777777777666654 45556676665544322 211 122222 334456789999999999999
Q ss_pred hcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHH
Q 000522 1093 AFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPI 1172 (1445)
Q Consensus 1093 af~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~ 1172 (1445)
+||..+...++..+..++..+..+....++.--+..+|++..+-+.++++.+.+...+. +..+.....+++..+-.+
T Consensus 194 ~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~---G~ltl~~~l~~LiLAPEf 270 (559)
T COG4988 194 AFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGE---GDLTLFAGLFVLILAPEF 270 (559)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---CCccHHHHHHHHHHhHHH
Confidence 99999999999999999999999999999888889999998876666655554432221 233444445556666778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcE
Q 000522 1173 VSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQ 1252 (1445)
Q Consensus 1173 ~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~Gek 1252 (1445)
..++..+-..|.....+..+.+.+..+.+.|.+...........|....+++.+|++++|+++. ++++|+||+++|||+
T Consensus 271 f~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~ 349 (559)
T COG4988 271 FQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQL 349 (559)
T ss_pred HHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCceeeecceEEecCCCC-cccCCceeEecCCcE
Confidence 8899999999999999999999999999887765332222223343445667779999998664 899999999999999
Q ss_pred EEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCCC-CChHHHHH
Q 000522 1253 VGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWS 1331 (1445)
Q Consensus 1253 vgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~-~sd~ei~~ 1331 (1445)
+||||+||||||||+++|+|+++|++|+|.+||+|+.+++.+.+|+++++|||+|++|+|||||||.+++. .+|++|++
T Consensus 350 talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~ 429 (559)
T COG4988 350 TALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIA 429 (559)
T ss_pred EEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998876 68999999
Q ss_pred HHHHccHHHHHHh-CCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEE
Q 000522 1332 VLEKCHVKEEVEA-VGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVI 1410 (1445)
Q Consensus 1332 aL~~~~l~~~i~~-lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI 1410 (1445)
+++++++.++++. .||||.+||+|.+|||||+||++||||++++++++++|||||+||.|||+.|++.|.+.++++|||
T Consensus 430 al~~a~l~~~v~~p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl 509 (559)
T COG4988 430 ALDQAGLLEFVPKPDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVL 509 (559)
T ss_pred HHHHhcHHHhhcCCCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEE
Confidence 9999999999986 499999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeccChhHHhhcCEEEEEeCCeEeeecCCCCCC
Q 000522 1411 TIAHRISTVLNMDEILILDHGHLPHCGCAAAPN 1443 (1445)
Q Consensus 1411 ~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~~ 1443 (1445)
+||||++.+.++|+|+|||+|+++|.|+|+++.
T Consensus 510 ~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~ 542 (559)
T COG4988 510 VITHRLEDAADADRIVVLDNGRLVEQGTHEELS 542 (559)
T ss_pred EEEcChHHHhcCCEEEEecCCceeccCCHHHHh
Confidence 999999999999999999999999999999873
No 22
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.6e-70 Score=688.34 Aligned_cols=544 Identities=23% Similarity=0.277 Sum_probs=470.9
Q ss_pred chHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 267 PSLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKL 346 (1445)
Q Consensus 267 ~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~ 346 (1445)
.+-++..++-|++.+.-..+..++..+++++.|++.+.++|.+-.+.+......+++++.+..++.+++.....|....+
T Consensus 142 ~~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~ 221 (709)
T COG2274 142 LSWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHL 221 (709)
T ss_pred hHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667778888888999999999999999999999999998777777888899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhHhHHHHHHH
Q 000522 347 KLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSG 424 (1445)
Q Consensus 347 ~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~p~~i~i~~~lL~~~lg~a~l~~ 424 (1445)
+.|+...+...+|+|.+++|...++++++|++++.+. |.+.|.+++.. +..+...++-++....|. ..-+.-++++
T Consensus 222 ~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~-~ys~~L~li~ 299 (709)
T COG2274 222 GKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMF-LYSWKLTLIV 299 (709)
T ss_pred HHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 9999999999999999999999999999999999886 88889887543 334445555554444343 4444444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 425 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 504 (1445)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 504 (1445)
++.+++.+.+..++.+.+++..++.++...++.+.+.|.++||++||..+-|+.+..++++.-.+.++...+........
T Consensus 300 l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~~~ 379 (709)
T COG2274 300 LAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLALIL 379 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 55566666778888899999999999999999999999999999999999999999999998888888888777776665
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhh
Q 000522 505 VFFWATTPTL--FSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHEL 582 (1445)
Q Consensus 505 ~~~~~~~~~~--~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~ 582 (1445)
..+......+ +.+++||++.+.++.+|.|+.+++.++.+.+..|+..+.+.+..+.++.++.+|+.+.++.|..++..
T Consensus 380 ~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~~~ 459 (709)
T COG2274 380 NTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQEGD 459 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 5554443333 35689999999999999999999999999999999999999999999999999999999876543311
Q ss_pred hhhcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCcc
Q 000522 583 EQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM 662 (1445)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~ 662 (1445)
.... ......+.|+++|++|.|..+++ ++|+|+||+|++||.++|||+||||||||+|+|+|.++
T Consensus 460 ~~~~-----------~~~~~~g~I~~~nvsf~y~~~~~----~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~ 524 (709)
T COG2274 460 KTLI-----------HLPKLQGEIEFENVSFRYGPDDP----PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK 524 (709)
T ss_pred cccc-----------cccccCceEEEEEEEEEeCCCCc----chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC
Confidence 1000 01235678999999999986532 35999999999999999999999999999999999999
Q ss_pred CCCeEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCCCCh-hhHHHHHHHhcchHHHhhccCCCccccc
Q 000522 663 LTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDP-QSYSETLKACTLDVDISLMVGGDMAYIG 728 (1445)
Q Consensus 663 ~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~-~~~~~v~~~~~l~~d~~~~~~gd~t~vg 728 (1445)
|++|+|.+|| +|+||+|++.+|+|||||||.++.+... |+..++++..+.++++..+|.|++|.+|
T Consensus 525 p~~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~ 604 (709)
T COG2274 525 PQQGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVG 604 (709)
T ss_pred CCCceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccc
Confidence 9999999997 5999999999999999999999987644 7788888888999999999999999999
Q ss_pred CCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeC
Q 000522 729 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 808 (1445)
Q Consensus 729 ~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~ 808 (1445)
|+|.+||||||||++||||++++|+|++|||||||||+++++.|.+++ .. ..+|+|+|+||||++.+++||+|+||++
T Consensus 605 E~G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L-~~-~~~~~T~I~IaHRl~ti~~adrIiVl~~ 682 (709)
T COG2274 605 EGGANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNL-LQ-ILQGRTVIIIAHRLSTIRSADRIIVLDQ 682 (709)
T ss_pred cCCCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHH-HH-HhcCCeEEEEEccchHhhhccEEEEccC
Confidence 999999999999999999999999999999999999999999999984 33 6678999999999999999999999999
Q ss_pred CEEEEecCHhHHHhccccCcc
Q 000522 809 GQVKWIGSSADLAVSLYSGFW 829 (1445)
Q Consensus 809 G~i~~~g~~~~~~~~~~~~~~ 829 (1445)
|+|+++|+++|+++..+.+.+
T Consensus 683 Gkiv~~gs~~ell~~~g~y~~ 703 (709)
T COG2274 683 GKIVEQGSHEELLAQGGLYAR 703 (709)
T ss_pred CceeccCCHHHHHHhcChHHH
Confidence 999999999999987665544
No 23
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=4.4e-71 Score=704.52 Aligned_cols=530 Identities=25% Similarity=0.365 Sum_probs=445.1
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000522 906 LSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNA 985 (1445)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~ 985 (1445)
++.++..++..+.+++++...+.............+.++++++.++..++.+++.+.....+.+....+++.+++++++.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~~~ 100 (571)
T TIGR02203 21 VAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLLGL 100 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34445555555556666555443211111112223344566777777888888888899999999999999999999999
Q ss_pred cccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 986 PVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1445)
Q Consensus 986 p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~ 1065 (1445)
|.++|++.+.|++++|+++|++.+++.+...+..++..++.+++.++++++.+|+++++++.+.++...+...+.+..++
T Consensus 101 ~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~~~ 180 (571)
T TIGR02203 101 PVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRLRR 180 (571)
T ss_pred CHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999888888888888888888888888888777666666666565666655566
Q ss_pred HHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000522 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1145 (1445)
Q Consensus 1066 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v 1145 (1445)
..+......++..+.+.|+++|+.+||+++.++++.+++.+..+...+..........+.....+++..+...++.++..
T Consensus 181 ~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 260 (571)
T TIGR02203 181 ISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFIAL 260 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666667788899999999999999999999999999999999988888777777766666655554432222211111
Q ss_pred HhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEE
Q 000522 1146 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1225 (1445)
Q Consensus 1146 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1225 (1445)
.. ...+..++|.+..++.++..+..++..+...+.++.....+.+|+.++.+.+++...... +. -+..+.|++
T Consensus 261 ~~----~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~-~~--~~~~~~i~~ 333 (571)
T TIGR02203 261 FQ----AQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTR-AI--ERARGDVEF 333 (571)
T ss_pred HH----HHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-CC--CCCCCeEEE
Confidence 10 013456788899999999999999999999999999999999999999987665322111 11 124578999
Q ss_pred EEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcC
Q 000522 1226 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1305 (1445)
Q Consensus 1226 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1305 (1445)
+||+|+|++..+++|+|+||+|+|||+++|+|+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++++||||
T Consensus 334 ~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 413 (571)
T TIGR02203 334 RNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQ 413 (571)
T ss_pred EEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEcc
Confidence 99999998766689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCccHHHhcCCCC--CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000522 1306 SPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1381 (1445)
Q Consensus 1306 dp~lF~gTIReNLdp~~--~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1381 (1445)
||++|+|||||||..++ +.+|++++++++++++++++.++ ||||.++|+|.+||||||||||||||++++|+|++|
T Consensus 414 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illL 493 (571)
T TIGR02203 414 DVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILIL 493 (571)
T ss_pred CcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999875 58999999999999999999998 999999999999999999999999999999999999
Q ss_pred eccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1382 DECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1382 DEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||||+||.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|+++
T Consensus 494 DEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l 554 (571)
T TIGR02203 494 DEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNEL 554 (571)
T ss_pred eCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 9999999999999999999998899999999999999999999999999999999998875
No 24
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.9e-71 Score=697.80 Aligned_cols=491 Identities=22% Similarity=0.288 Sum_probs=402.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHH
Q 000522 945 LCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANF 1024 (1445)
Q Consensus 945 ~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~ 1024 (1445)
+.++.++..++.++..+.....+.+...+++.++++++++.|+.+|++.++|++++|+++|++.+++.+...+..++..+
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~ 145 (574)
T PRK11160 66 VRGAAIGRTAGRYGERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAAL 145 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455566677777777788889999999999999999999999999999999999999999999999888888888888
Q ss_pred HhHHHhhhhHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHH
Q 000522 1025 VGLLGIAVVLSYVQVFFLLLLVPFWF-IYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAK 1103 (1445)
Q Consensus 1025 ~~~l~~~~~~~~~~~~~~~~~~pl~~-~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~ 1103 (1445)
+.+++.++++++.+|.++++++..+. ++..+..++.+..+...+...++.+.+.+.+.|.++|+++||+||.|+++.++
T Consensus 146 ~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~ 225 (574)
T PRK11160 146 VVILVLTIGLSFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQ 225 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHH
Confidence 88888888888888776654432222 22222233334434444444556677888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000522 1104 FKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYA-APIVSLLGNFLSS 1182 (1445)
Q Consensus 1104 ~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~-~~~~~~l~~li~~ 1182 (1445)
+.+..++..+..+.......+.....+++..+...++..+..... .+..+.|.+..++.|. ......+..+...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~-----~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~ 300 (574)
T PRK11160 226 LEQTEQQWLAAQRRQANLTGLSQALMILANGLTVVLMLWLAAGGV-----GGNAQPGALIALFVFAALAAFEALMPVAGA 300 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----ccccchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888887776666665555555544433222211111111 1233455554444443 3334566677788
Q ss_pred HHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCC
Q 000522 1183 FTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAG 1262 (1445)
Q Consensus 1183 ~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSG 1262 (1445)
+.++.....|.+|+.++.+.+++........ ..+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||
T Consensus 301 ~~~~~~~~~s~~ri~~ll~~~~~~~~~~~~~--~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsG 378 (574)
T PRK11160 301 FQHLGQVIASARRINEITEQKPEVTFPTTST--AAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCG 378 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCcccC--CCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCC
Confidence 8888999999999999998776532111111 12345789999999999765567999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCC-CCChHHHHHHHHHccHHHH
Q 000522 1263 KSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEE 1341 (1445)
Q Consensus 1263 KSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~-~~sd~ei~~aL~~~~l~~~ 1341 (1445)
||||+++|.|+++|++|+|.+||+|+++++.+++|++|++|||||++|+|||||||.++. +.+|+++++++++++++++
T Consensus 379 KSTL~~ll~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~ 458 (574)
T PRK11160 379 KSTLLQLLTRAWDPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKL 458 (574)
T ss_pred HHHHHHHHhcCCCCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHH
Confidence 999999999999999999999999999999999999999999999999999999998765 4789999999999999999
Q ss_pred HHh-CCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHh
Q 000522 1342 VEA-VGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL 1420 (1445)
Q Consensus 1342 i~~-lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~ 1420 (1445)
+++ .||||.+||+|.+||||||||+|||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.
T Consensus 459 i~~p~GldT~vge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~ 538 (574)
T PRK11160 459 LEDDKGLNAWLGEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLE 538 (574)
T ss_pred HcCccccCchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHH
Confidence 985 4999999999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred hcCEEEEEeCCeEeeecCCCCC
Q 000522 1421 NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1421 ~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+||+|++|++|+++|.|+|+|+
T Consensus 539 ~~d~i~~l~~G~i~~~g~~~~l 560 (574)
T PRK11160 539 QFDRICVMDNGQIIEQGTHQEL 560 (574)
T ss_pred hCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999875
No 25
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.5e-71 Score=659.52 Aligned_cols=541 Identities=20% Similarity=0.224 Sum_probs=442.3
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 272 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQ-GSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 350 (1445)
Q Consensus 272 ~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~-~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~i 350 (1445)
.+.+..|+.+..+.++.++.......-|.++.+++|.+.. .+......-....+..++++.+++...+.+.....+.++
T Consensus 140 ~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~rv 219 (716)
T KOG0058|consen 140 GLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLLQYAGERV 219 (716)
T ss_pred HHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556678888888888888999999999999999998876 333223333455666778888899888888888899999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHH-HHHhhHhHHHHHHHHHHH
Q 000522 351 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVAL-YLLYTQVKFAFVSGLAIT 428 (1445)
Q Consensus 351 r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~p~~i~i~~-~lL~~~lg~a~l~~~~~~ 428 (1445)
-..+...+|++.++...+.+++..+|++++.++.|++.+.+.+ .++.+..-+.++...++ +|++...-++.+. ++.+
T Consensus 220 ~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltlv~-~i~~ 298 (716)
T KOG0058|consen 220 VARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTLVT-LIVV 298 (716)
T ss_pred HHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHHHH-HHHh
Confidence 9999999999999999999999999999999999999998865 45666666666665444 3333333333322 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 429 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 508 (1445)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 508 (1445)
.+.+.+..+++++.++..++..++..+-.+...|.|++||+||+|+-|+...++..+.-++-.+..+|......+....+
T Consensus 299 P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~~ 378 (716)
T KOG0058|consen 299 PIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGST 378 (716)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhHH
Confidence 33344567777888888888888888889999999999999999999988877776654444444444444333332222
Q ss_pred HH--HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhc
Q 000522 509 AT--TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 586 (1445)
Q Consensus 509 ~~--~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~ 586 (1445)
.. ....++++.+|.|++.++.||++...+++.+-..+..++..+...++.++++..+.+|+.+|++.+..-+... .
T Consensus 379 ~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~G--~ 456 (716)
T KOG0058|consen 379 NLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLTG--T 456 (716)
T ss_pred HHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCCC--c
Confidence 22 2235667888999999999999999999999999999999999999999999999999999997654322100 0
Q ss_pred CCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCe
Q 000522 587 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 666 (1445)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G 666 (1445)
..| ....+.|+|+|++|+|+.+++ .++|+|+||+|+|||.+|+||||||||||+.++|+.+|+|++|
T Consensus 457 ~~p----------~~~~G~IeF~~VsFaYP~Rp~---~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG 523 (716)
T KOG0058|consen 457 LAP----------DHLQGVIEFEDVSFAYPTRPD---VPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSG 523 (716)
T ss_pred ccc----------ccccceEEEEEeeeecCCCCC---chhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCC
Confidence 011 134578999999999998755 4559999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000522 667 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1445)
Q Consensus 667 ~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~ 732 (1445)
+|.+|| +||+|.|+|.||++||+|||.+|.+ .++|+..++.+.+.-++.|..+|+|++|.|||+|.
T Consensus 524 ~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~ 603 (716)
T KOG0058|consen 524 RILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGS 603 (716)
T ss_pred eEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccc
Confidence 999998 5999999999999999999999986 46788899999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEE
Q 000522 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1445)
Q Consensus 733 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~ 812 (1445)
.|||||||||||||||++||.||||||+|||||++.+. +.+.++.. ..+++|||+|+||++.+++||+|+++++|+++
T Consensus 604 qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~-lVq~aL~~-~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~ 681 (716)
T KOG0058|consen 604 QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEY-LVQEALDR-LMQGRTVLVIAHRLSTVRHADQIVVIDKGRVV 681 (716)
T ss_pred cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHH-HHHHHHHH-hhcCCeEEEEehhhhHhhhccEEEEEcCCeEE
Confidence 99999999999999999999999999999999999655 44554544 67789999999999999999999999999999
Q ss_pred EecCHhHHHhcc-ccCccc
Q 000522 813 WIGSSADLAVSL-YSGFWS 830 (1445)
Q Consensus 813 ~~g~~~~~~~~~-~~~~~~ 830 (1445)
|.|+++|+++.. +.+.++
T Consensus 682 E~G~h~eLl~~~~gly~~L 700 (716)
T KOG0058|consen 682 EMGTHDELLSKPNGLYAKL 700 (716)
T ss_pred ecccHHHHhhCcccHHHHH
Confidence 999999999876 344433
No 26
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.3e-71 Score=637.23 Aligned_cols=488 Identities=23% Similarity=0.332 Sum_probs=408.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHh
Q 000522 947 IFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVG 1026 (1445)
Q Consensus 947 ~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~ 1026 (1445)
++++...+..++..........+.-..+|.++|+++...+..-..+...|+++||+..|++.+|+.+-..+...+..+..
T Consensus 66 ~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~ 145 (573)
T COG4987 66 GLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVL 145 (573)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHH
Confidence 34555556666666666777888889999999999999999999999999999999999999999999988888888888
Q ss_pred HHHhhhhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHH
Q 000522 1027 LLGIAVVLSYVQVFFLLLLVPF-WFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFK 1105 (1445)
Q Consensus 1027 ~l~~~~~~~~~~~~~~~~~~pl-~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~ 1105 (1445)
.+++.+.+++.+|++++.+... ++....+...+.+..|...+.-...+..++++|.|.+.|....+.||.++.|.+.+.
T Consensus 146 ~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~ 225 (573)
T COG4987 146 IAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALE 225 (573)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHH
Confidence 8888888877777765544333 333333344444555566555566788999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHH-HHH
Q 000522 1106 EHVVLYQRTSYSELTASLWLSLRLQLLAAFIIS-FIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFL-SSF 1183 (1445)
Q Consensus 1106 ~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~-~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li-~~~ 1183 (1445)
+..+.+.+..........|....+.++.++++. .+...+.... .+..+.....+++..++.....+.-+. ..+
T Consensus 226 ~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~-----~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~ 300 (573)
T COG4987 226 ATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVG-----AGALAQPGAALALLVIFAALEAFEPLAPGAF 300 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-----CCCcchhHHHHHHHHHHHHHHHHhhhcchhH
Confidence 999999999999999999999998888876655 3333332111 111121122222222234444444444 667
Q ss_pred HHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCH
Q 000522 1184 TETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGK 1263 (1445)
Q Consensus 1184 ~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGK 1263 (1445)
.++.+...|++|+.+..+.++|...+....+ -+.+ .++++||+|+|+.+.+++|+|+||++++||||||+|||||||
T Consensus 301 ~~lgq~~~Sa~Rl~~i~~q~~e~~~~~~~~~--~~~~-~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGK 377 (573)
T COG4987 301 QHLGQVIASARRLNDILDQKPEVTFPDEQTA--TTGQ-ALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGK 377 (573)
T ss_pred HHhhHHHHHHHHHhhhccCCcccCCCccccC--Cccc-eeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCH
Confidence 8889999999999999988777532211111 1122 799999999999888899999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCCC-CChHHHHHHHHHccHHHHH
Q 000522 1264 SSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEV 1342 (1445)
Q Consensus 1264 STLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~-~sd~ei~~aL~~~~l~~~i 1342 (1445)
||++++|.|.++|++|+|.++|.+++.++.+++|+.|++++|.+.+|+||+|+||...++ .||||+|++|+++||.+++
T Consensus 378 STllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~ 457 (573)
T COG4987 378 STLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLL 457 (573)
T ss_pred HHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHH
Confidence 999999999999999999999999999999999999999999999999999999987654 6999999999999999999
Q ss_pred HhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHh
Q 000522 1343 EAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL 1420 (1445)
Q Consensus 1343 ~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~ 1420 (1445)
++. ||+|.+||+|.+||||||||++|||+||++.++++|||||.+||++||+.|.+.|.+..+|||+|+||||+..+.
T Consensus 458 ~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le 537 (573)
T COG4987 458 ESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLE 537 (573)
T ss_pred HhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHh
Confidence 999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCEEEEEeCCeEeeecCCCCC
Q 000522 1421 NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1421 ~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
.||||+|||+|+++|+|+|.++
T Consensus 538 ~~drIivl~~Gkiie~G~~~~L 559 (573)
T COG4987 538 RMDRIIVLDNGKIIEEGTHAEL 559 (573)
T ss_pred hcCEEEEEECCeeeecCCHHhh
Confidence 9999999999999999999987
No 27
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.3e-70 Score=692.70 Aligned_cols=463 Identities=21% Similarity=0.266 Sum_probs=380.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhH
Q 000522 948 FCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGL 1027 (1445)
Q Consensus 948 l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~ 1027 (1445)
+.++..++.++..+.....+.+...+++.++++++++.|.+||++.++|++++|+++|++.+++.+...+..++..++.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~ 141 (529)
T TIGR02868 62 FGIGRAVFRYLERLVGHDAALRSLGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVG 141 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566667777777888899999999999999999999999999999999999999999999888888888888777
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHH
Q 000522 1028 LGIAVVLSYVQVFFLLLLVPFWFIY-SKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKE 1106 (1445)
Q Consensus 1028 l~~~~~~~~~~~~~~~~~~pl~~~~-~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~ 1106 (1445)
++.++++++..|.+.++++..+.++ .....++.+..+...+...+..+.+.+++.|+++|+++||+|++|+.+.+++.+
T Consensus 142 ~~~~~~l~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~ 221 (529)
T TIGR02868 142 SAAVAAIALLSVPAALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEA 221 (529)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHH
Confidence 7777777788877766554433332 222233344434444444456678889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 1107 HVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTET 1186 (1445)
Q Consensus 1107 ~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~ 1186 (1445)
..++..+..........+......++..+...++..+.... ...+..+.|.+...+.++..+..++..+...+.++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~ 297 (529)
T TIGR02868 222 ADRELLAAERRAARATGLGAAAQLLAAGLAVLGALWAGGPA----VADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQAL 297 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877766555444444333333332221111111100 01234567888888888888999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCccccccCC-CCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHH
Q 000522 1187 EKEMVSLERVLEYMDVPQEELCGYQ-SLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSS 1265 (1445)
Q Consensus 1187 e~~~~sv~Ri~~~~~~~~e~~~~~~-~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKST 1265 (1445)
.+...+.+|+.++.+.++|...... .+...+|..+.|+|+||+|+|+++ +++|+|+||+|+|||++||||||||||||
T Consensus 298 ~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~-~~vL~~isl~i~~G~~vaIvG~SGsGKST 376 (529)
T TIGR02868 298 TRVRAAAERIEEVTGAKGPRPEGVVPAAGALGLGKPTLELRDLSFGYPGS-PPVLDGVSLDLPPGERVAILGPSGSGKST 376 (529)
T ss_pred HHHHHHHHHHHHHhcCCCCcCCCCCCCCcccCCCCceEEEEEEEEecCCC-CceeecceEEEcCCCEEEEECCCCCCHHH
Confidence 9999999999999987765321111 111123456789999999999754 46999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCC-CCChHHHHHHHHHccHHHHHHh
Q 000522 1266 ILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEA 1344 (1445)
Q Consensus 1266 Ll~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~-~~sd~ei~~aL~~~~l~~~i~~ 1344 (1445)
|+++|+|+|+|++|+|.+||+|++++ .+++|++++||||||++|+|||||||.+++ +.+|+++++|++.+++++++++
T Consensus 377 Ll~lL~g~~~p~~G~I~i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~ 455 (529)
T TIGR02868 377 LLMLLTGLLDPLQGEVTLDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRS 455 (529)
T ss_pred HHHHHhcCCCCCCcEEEECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHh
Confidence 99999999999999999999999999 999999999999999999999999999875 4699999999999999999999
Q ss_pred C--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccCh
Q 000522 1345 V--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRI 1416 (1445)
Q Consensus 1345 l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl 1416 (1445)
+ ||||.+||+|.+||||||||||||||++++|+|||||||||+||++||+.|++.+++..+++|+|+||||+
T Consensus 456 lp~GldT~ige~G~~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 456 LPDGLDTVLGEGGARLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred CcccccchhccccCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 8 99999999999999999999999999999999999999999999999999999999988999999999996
No 28
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3e-70 Score=708.52 Aligned_cols=527 Identities=23% Similarity=0.325 Sum_probs=422.5
Q ss_pred HHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Q 000522 909 ILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVL 988 (1445)
Q Consensus 909 ~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ 988 (1445)
++........++.+....|..-..........+...++++.++..++.+++.++....+.+...+++.++++++++.|+.
T Consensus 149 ~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~ 228 (694)
T TIGR01846 149 LALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTSRIDVELGARLYRHLLGLPLG 228 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 33444444555666655553211111112223344455566667788888889999999999999999999999999999
Q ss_pred ccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 989 FFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRR 1068 (1445)
Q Consensus 989 ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~ 1068 (1445)
||++.++|++++|+ +|++.+.+.+...+..++..++.++..++++++.+|.++++++..++++..+.....+..+...+
T Consensus 229 ~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~ 307 (694)
T TIGR01846 229 YFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGSLVCYALLSVFVGPILRKRVE 307 (694)
T ss_pred HcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 69999998887766666655555555566667777766555443333333322222222222222
Q ss_pred HHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhh
Q 000522 1069 LDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGS 1148 (1445)
Q Consensus 1069 l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~ 1148 (1445)
...+..+...+++.|+++|+.+||+||.|+.+.+++.+..++..+..+.....+.+.....+++..+...++..+.....
T Consensus 308 ~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv 387 (694)
T TIGR01846 308 DKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQAIELIQKLTFAILLWFGAHLV 387 (694)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 23344566778999999999999999999999999999998888887777666666666555554432222211111100
Q ss_pred cCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEE
Q 000522 1149 RGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNV 1228 (1445)
Q Consensus 1149 ~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nV 1228 (1445)
..+..+.|.+..+..+...+..++..+...+.++++...+.+|+.++++.++|...... ....+..|.|+|+||
T Consensus 388 ----~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~--~~~~~~~~~i~~~~v 461 (694)
T TIGR01846 388 ----IGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSAGL--AALPELRGAITFENI 461 (694)
T ss_pred ----HcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCCCC--CCCCCCCCeEEEEEE
Confidence 12456788888888899999999999999999999999999999999988766422111 111123578999999
Q ss_pred EEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCc
Q 000522 1229 TMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPF 1308 (1445)
Q Consensus 1229 s~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~ 1308 (1445)
+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+|+|++|+|.+||+|+++++.+++|+++++|||||.
T Consensus 462 sf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~ 541 (694)
T TIGR01846 462 RFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAIADPAWLRRQMGVVLQENV 541 (694)
T ss_pred EEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhhCCHHHHHHhCeEEccCCe
Confidence 99998766789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccc
Q 000522 1309 LFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1385 (1445)
Q Consensus 1309 lF~gTIReNLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaT 1385 (1445)
+|+|||||||..++ ..+|++++++++.++++++++++ ||||.++++|.+||||||||++||||++++|+||||||||
T Consensus 542 lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~lARall~~~~ililDEpt 621 (694)
T TIGR01846 542 LFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEAT 621 (694)
T ss_pred ehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCC
Confidence 99999999998865 57899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1386 ANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1386 S~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|+||++|++.+.+.|++..+++|+|+||||++++..||+|++|++|+|+|.|+|+++
T Consensus 622 s~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l 678 (694)
T TIGR01846 622 SALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEEL 678 (694)
T ss_pred cCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 999999999999999998889999999999999999999999999999999999775
No 29
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.5e-69 Score=691.48 Aligned_cols=534 Identities=19% Similarity=0.187 Sum_probs=420.9
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 270 VRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQ-GSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1445)
Q Consensus 270 ~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~-~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~ 348 (1445)
++...+.+++.++...++.++..++..++|++++.+++.+.. +.+....+.++++++++.++..++.....+...+.+.
T Consensus 13 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (588)
T PRK11174 13 LKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVGFKAGQ 92 (588)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667788888889999999999999999999999997642 2222233444555666677788888888888899999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHhhHhHHHHHHH
Q 000522 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY---LLYTQVKFAFVSG 424 (1445)
Q Consensus 349 ~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~---lL~~~lg~a~l~~ 424 (1445)
++...+...+|+|.++++.....+.++|++.|.++.|++++.+... .+..++...+.++++++ .+.+.+++.+++.
T Consensus 93 ~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~ 172 (588)
T PRK11174 93 HIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGLILLGT 172 (588)
T ss_pred HHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988889999999999999999998653 45555555444443333 3334444433332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHH----HHHHHHHHHHHHHHH
Q 000522 425 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMK----TRSSEVKHLSTRKYL 500 (1445)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~----~R~~El~~~~~~~~~ 500 (1445)
+++...+..++.++.++..++.++..++..+.+.|.++|+++||.|++|+.+.+++.+ .|+.+.+..+.....
T Consensus 173 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (588)
T PRK11174 173 ---APLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLS 249 (588)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333334556778888888999999999999999999999999999999988887744 444444443333323
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH---------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 501 DAWCVFFWATTPTLFSLFTFGLFALMGHQLDA---------AMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTR 571 (1445)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~---------~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~ 571 (1445)
......+.... . +.++.++.+.+. +.++. ..+|+++.+...+..|+..++..+..+.++.++.+||.+
T Consensus 250 ~~~~~~~~~~~-~-~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ 326 (588)
T PRK11174 250 SAVLEFFASIS-I-ALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVT 326 (588)
T ss_pred HHHHHHHHHHH-H-HHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32222222111 1 122233333333 33443 345666677788899999999999999999999999999
Q ss_pred HhCCCCcchhhhhhcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHH
Q 000522 572 FLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKS 651 (1445)
Q Consensus 572 fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKS 651 (1445)
+++.++.++.... ...+ ......|+++|++|.|+++ +++|+|+||++++|++++||||||||||
T Consensus 327 ~l~~~~~~~~~~~-~~~~----------~~~~~~i~~~~vsf~~~~~-----~~vL~~i~l~i~~G~~vaIvG~SGsGKS 390 (588)
T PRK11174 327 FLETPLAHPQQGE-KELA----------SNDPVTIEAEDLEILSPDG-----KTLAGPLNFTLPAGQRIALVGPSGAGKT 390 (588)
T ss_pred HHcCCCcccCCCc-cccC----------CCCCceEEEEeeEEeccCC-----CeeeeeeEEEEcCCCEEEEECCCCCCHH
Confidence 9976543211000 0000 0123469999999987632 2359999999999999999999999999
Q ss_pred HHHHHHhcCccCCCeEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHh
Q 000522 652 SLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDIS 717 (1445)
Q Consensus 652 tll~~l~g~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~ 717 (1445)
||+++|+|++ |++|+|.++| +|+||||+||||++||||||.+|++ .++++++++++.|+++++++
T Consensus 391 TL~~lL~g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~ 469 (588)
T PRK11174 391 SLLNALLGFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLP 469 (588)
T ss_pred HHHHHHhcCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHH
Confidence 9999999999 9999999987 5999999999999999999999964 89999999999999999999
Q ss_pred hccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhh
Q 000522 718 LMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI 797 (1445)
Q Consensus 718 ~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l 797 (1445)
.+|+|++|.|||+|.+|||||||||+||||++++|+|+||||||||||++++++|.+. +.. +.+++|+|+||||++.+
T Consensus 470 ~lp~G~dT~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~-l~~-~~~~~TvIiItHrl~~i 547 (588)
T PRK11174 470 LLPQGLDTPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQA-LNA-ASRRQTTLMVTHQLEDL 547 (588)
T ss_pred hcccccccccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHH-HhCCCEEEEEecChHHH
Confidence 9999999999999999999999999999999999999999999999999999999986 444 55789999999999999
Q ss_pred hhCCEEEEEeCCEEEEecCHhHHHhccccCc
Q 000522 798 SAADMVVVMDKGQVKWIGSSADLAVSLYSGF 828 (1445)
Q Consensus 798 ~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 828 (1445)
+.||+|++|++|+|+++|+++|++++++.+.
T Consensus 548 ~~aD~Iivl~~G~i~e~G~~~eL~~~~~~y~ 578 (588)
T PRK11174 548 AQWDQIWVMQDGQIVQQGDYAELSQAGGLFA 578 (588)
T ss_pred HhCCEEEEEeCCeEeecCCHHHHHhcchHHH
Confidence 9999999999999999999999987655443
No 30
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=4.1e-69 Score=686.76 Aligned_cols=532 Identities=24% Similarity=0.356 Sum_probs=421.5
Q ss_pred HHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 000522 907 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 986 (1445)
Q Consensus 907 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p 986 (1445)
+.++........++.+....+..-..........++.+++++.++..++.+++.++....+.+....++..+++++++.|
T Consensus 26 ~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~ 105 (576)
T TIGR02204 26 ALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGERVVADIRRAVFAHLISLS 105 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34444555555555555544421101111112223344445555556666777788888899999999999999999999
Q ss_pred ccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 987 VLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSREL 1066 (1445)
Q Consensus 987 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l 1066 (1445)
.++|++...|++++|+++|++.+++.....+..++..++.+++.++++++..|++.++++...++...+...+.+..+..
T Consensus 106 ~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~~~ 185 (576)
T TIGR02204 106 PSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLFGRRVRKL 185 (576)
T ss_pred HHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888887777777777777777777777655444333333333333333333444
Q ss_pred HHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 000522 1067 RRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVI 1146 (1445)
Q Consensus 1067 ~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~ 1146 (1445)
.+.....+....+++.|.++|+++||+|+.++++.+++.+..+...+..........|+......+..+...++..+...
T Consensus 186 ~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 265 (576)
T TIGR02204 186 SRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALLTAIVIVLVFGAIVGVLWVGAH 265 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445566778899999999999999999999999999998888777766655555555544443332211111111110
Q ss_pred hhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEE
Q 000522 1147 GSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQ 1226 (1445)
Q Consensus 1147 ~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~ 1226 (1445)
. ...+..+.|.+..+..+...+..++..+...+.++.....+.+|+.++.+.++|........+..+|..+.|+|+
T Consensus 266 ~----v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 341 (576)
T TIGR02204 266 D----VIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAPAHPKTLPVPLRGEIEFE 341 (576)
T ss_pred H----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCCCCCccCCcCCCceEEEE
Confidence 0 012445788888888899999999999999999999999999999999887654211111111223445789999
Q ss_pred EEEEEeCCCC-CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcC
Q 000522 1227 NVTMRYKPSL-PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1305 (1445)
Q Consensus 1227 nVs~~Y~~~~-~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1305 (1445)
||+|+|+++. +++|+|+||+|+|||+++|+|+||||||||+++|+|+++|++|+|.+||+|+++++.+++|++++|+||
T Consensus 342 ~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q 421 (576)
T TIGR02204 342 QVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRARMALVPQ 421 (576)
T ss_pred EEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHHHHHhceEEcc
Confidence 9999997543 579999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCccHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000522 1306 SPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1445)
Q Consensus 1306 dp~lF~gTIReNLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1445)
||++|+|||||||.+++ ..+|++++++++++++.++++.+ |+||.++|+|.+||||||||++||||++++|+|||||
T Consensus 422 ~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qrl~laRal~~~~~ililD 501 (576)
T TIGR02204 422 DPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQRIAIARAILKDAPILLLD 501 (576)
T ss_pred CCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHHHHHHHHHHhCCCeEEEe
Confidence 99999999999999865 46889999999999999999998 9999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1383 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1383 EaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||+||.+|++.+.+.+++..+++|+|+||||++.+..||+|++|++|+++|.|+|+++
T Consensus 502 Epts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l 561 (576)
T TIGR02204 502 EATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAEL 561 (576)
T ss_pred CcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHH
Confidence 999999999999999999998899999999999999999999999999999999998765
No 31
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=8.1e-69 Score=683.77 Aligned_cols=530 Identities=23% Similarity=0.297 Sum_probs=416.4
Q ss_pred HHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000522 904 ICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIV 983 (1445)
Q Consensus 904 ~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll 983 (1445)
+++..++..+.....++++....+.... ......++.+++++.++..+..+.......+...+...++..+++++++
T Consensus 24 ~~~~~i~~~~~~~~~~~~~~~iid~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~ 100 (588)
T PRK13657 24 LAVANVLLAAATFAEPILFGRIIDAISG---KGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFERII 100 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555556666667665553221 1112222333333333333333333444444555555666679999999
Q ss_pred cCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 984 NAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTS 1063 (1445)
Q Consensus 984 ~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~s 1063 (1445)
+.|..+|++.+.|++++|+++|++.+.+.+...+..++..++..++.++++.+..|+++++++.+++++..+...+.+..
T Consensus 101 ~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~ 180 (588)
T PRK13657 101 QLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMRKT 180 (588)
T ss_pred hCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999877766666666666666666666677777766665555555555566666666
Q ss_pred HHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Q 000522 1064 RELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATM 1143 (1445)
Q Consensus 1064 r~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~ 1143 (1445)
++..+......+.+.+++.|.++|+.+||+||.++.+.+++.+..+...+........+.+.....+++..+...++.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (588)
T PRK13657 181 KDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAILVL 260 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666677888899999999999999999999999999998888877766655555554444443333222211111
Q ss_pred HHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccE
Q 000522 1144 AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLI 1223 (1445)
Q Consensus 1144 ~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I 1223 (1445)
.... ...+..+.|.+..++.++..+..++..+...+.++..+..+.+|+.++.+.+++........+. -+..+.|
T Consensus 261 g~~~----v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~-~~~~~~I 335 (588)
T PRK13657 261 GAAL----VQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGAIDL-GRVKGAV 335 (588)
T ss_pred HHHH----HHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCCc-CCCCCeE
Confidence 1111 1134567888888888999999999999999999999999999999998765442111111111 1234689
Q ss_pred EEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEE
Q 000522 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1445)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1445)
+|+||+|+|+++ +++|+|+||+++|||++||+|+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||
T Consensus 336 ~~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v 414 (588)
T PRK13657 336 EFDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVV 414 (588)
T ss_pred EEEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEE
Confidence 999999999743 5699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCccHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000522 1304 PQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1380 (1445)
Q Consensus 1304 pQdp~lF~gTIReNLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1380 (1445)
||||.+|+|||||||.+++ ..+|++++++++.++++++++++ |+||.++++|.+||||||||||||||++++|+|||
T Consensus 415 ~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~ili 494 (588)
T PRK13657 415 FQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILI 494 (588)
T ss_pred ecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998874 46899999999999999999998 99999999999999999999999999999999999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1381 LDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1381 LDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||||+||++|++.|.+.|++..+++|+|+||||+++++.||+|++|++|+++|.|+|+++
T Consensus 495 LDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l 556 (588)
T PRK13657 495 LDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDEL 556 (588)
T ss_pred EeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999988889999999999999999999999999999999999775
No 32
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=9.8e-69 Score=675.57 Aligned_cols=515 Identities=22% Similarity=0.284 Sum_probs=407.3
Q ss_pred HHHHHHHHHHhhhhhHhhhhhcccC-CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000522 906 LSAILMQASRNGNDLWLSYWVDTTG-SSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 984 (1445)
Q Consensus 906 ~~~~~~~~~~~~~~~wl~~w~~~~~-~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ 984 (1445)
++.++..++....++.+++..+... ..........+++.++++.++..++.+++.+.....+.+...+++.++++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~ 89 (529)
T TIGR02857 10 LLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAVAA 89 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444445555555555555554321 111111223345556666677778888888888899999999999999999999
Q ss_pred CcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 985 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1064 (1445)
Q Consensus 985 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr 1064 (1445)
.|..+|++.++|++++|+++|++.+++.+...+..++..++..++.++++.+.+|+++++++....+...+...+.+..+
T Consensus 90 ~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~~~ 169 (529)
T TIGR02857 90 LGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWAAQ 169 (529)
T ss_pred CCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999888777777777666666666666666665544333222222222222222222
Q ss_pred HHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH-HH
Q 000522 1065 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIA-TM 1143 (1445)
Q Consensus 1065 ~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~-~~ 1143 (1445)
...+......+.+.+++.|+++|+++||+|+.|+++.+++.+..++..+..........+.....+++..+...++. +.
T Consensus 170 ~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (529)
T TIGR02857 170 AAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAVYI 249 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333334455677899999999999999999999999999988888777766666565655555554443222211 11
Q ss_pred HHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccE
Q 000522 1144 AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLI 1223 (1445)
Q Consensus 1144 ~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I 1223 (1445)
..... .+..+.|.+..++.++..+..++..+...+.++.....+.+|+.++.+.++++.... +...+..+.|
T Consensus 250 ~~~~~-----~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~---~~~~~~~~~i 321 (529)
T TIGR02857 250 GFRLL-----AGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA---PVTAAPAPSL 321 (529)
T ss_pred HHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---CCCCCCCCeE
Confidence 11111 234567878788888888999999999999999999999999999998554322111 1112234689
Q ss_pred EEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEE
Q 000522 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1445)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1445)
+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++++||
T Consensus 322 ~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v 401 (529)
T TIGR02857 322 EFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWV 401 (529)
T ss_pred EEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEE
Confidence 99999999986556799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCccHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000522 1304 PQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1380 (1445)
Q Consensus 1304 pQdp~lF~gTIReNLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1380 (1445)
||||++|+|||||||.++. ..+|++++++++.++++++++++ ||||.+||+|.+||||||||++||||++++|+|+|
T Consensus 402 ~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ili 481 (529)
T TIGR02857 402 PQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLL 481 (529)
T ss_pred cCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998865 46899999999999999999999 99999999999999999999999999999999999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEE
Q 000522 1381 LDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILIL 1428 (1445)
Q Consensus 1381 LDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl 1428 (1445)
||||||+||++|++.|++.|++..+++|+|+||||+++++.||+|+||
T Consensus 482 lDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 482 LDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred EeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999988899999999999999999999986
No 33
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-71 Score=622.63 Aligned_cols=477 Identities=24% Similarity=0.398 Sum_probs=384.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHh--hhhHHHHHHHHHHHHhHHHh
Q 000522 953 SFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMID--DSLPFILNILLANFVGLLGI 1030 (1445)
Q Consensus 953 ~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id--~~l~~~l~~~~~~~~~~l~~ 1030 (1445)
+++.-+|+|+......-+.+++-..+++++....+.|.-...+|+.+.-..+..+.+. +.+.+.+...+ .-+...
T Consensus 273 G~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~rrtGeVLrvmdrGtssvtll~yvVF~i~Ptl---lDl~va 349 (790)
T KOG0056|consen 273 GFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLNRRTGEVLRVMDRGTSSVTLLEYVVFQIGPTL---LDLGVA 349 (790)
T ss_pred cchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeecccccceeehhccCcchhhHHHHHHhhcccHH---HHhhhh
Confidence 4556667777777888889999999999999999999999999998877766554443 22222222222 222222
Q ss_pred h-hhHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHH
Q 000522 1031 A-VVLSYVQVFFLLLLVPFWFIYSKLQ----FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFK 1105 (1445)
Q Consensus 1031 ~-~~~~~~~~~~~~~~~pl~~~~~~i~----~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~ 1105 (1445)
+ .......+|+.+++..+..+|..+. .+-.+..|.+...+.+++ +.-.+++-+..|+|-|+.|++..++|.
T Consensus 350 ~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesr----Ar~vDsllNFETVKyy~Ae~yEverYr 425 (790)
T KOG0056|consen 350 MVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESR----ARQVDSLLNFETVKYYNAEDYEVERYR 425 (790)
T ss_pred hhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhh----hhhhhhhhcchhhhccCchhhhHHHHH
Confidence 2 2222346777776666665554332 222223333333333333 455789999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 1106 EHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTE 1185 (1445)
Q Consensus 1106 ~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~ 1185 (1445)
+.++.+|+.-++....-..+...-..+..+-.....++.+. .......+.|...+..+|.+++..+++++-..+..
T Consensus 426 eAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY----~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~ 501 (790)
T KOG0056|consen 426 EAILKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAY----RVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRS 501 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeee----eeeeccccccceehHHHHHHHHhCchHHHHHHHHH
Confidence 99999999887766554444443333322211111111111 11234456788889999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHH
Q 000522 1186 TEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSS 1265 (1445)
Q Consensus 1186 ~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKST 1265 (1445)
++++.+-.|++.++++.++|..+.+..+|-. -.+|.|+|+||+|.|.|+ +|||+||||+++||+.||+|||||+||||
T Consensus 502 iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~-~~~G~i~fsnvtF~Y~p~-k~vl~disF~v~pGktvAlVG~SGaGKST 579 (790)
T KOG0056|consen 502 IQKNFIDMENMFDLLKEEPEVVDLPGAPPLK-VTQGKIEFSNVTFAYDPG-KPVLSDISFTVQPGKTVALVGPSGAGKST 579 (790)
T ss_pred HHHhhhhHHHHHHHhhcCchhhcCCCCCCcc-ccCCeEEEEEeEEecCCC-CceeecceEEecCCcEEEEECCCCCchhH
Confidence 9999999999999998877754333333222 247999999999999876 57999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCCC-CChHHHHHHHHHccHHHHHHh
Q 000522 1266 ILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEA 1344 (1445)
Q Consensus 1266 Ll~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~ 1344 (1445)
++++|+|++|.++|+|+|||+||+++..++||++||+||||.+||+.||..||.+... .+|||+.+|.+.++++|.|-+
T Consensus 580 imRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~ 659 (790)
T KOG0056|consen 580 IMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQ 659 (790)
T ss_pred HHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999998764 689999999999999999999
Q ss_pred C--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhc
Q 000522 1345 V--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNM 1422 (1445)
Q Consensus 1345 l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~ 1422 (1445)
+ |++|.|||+|-.||||||||+|+||++||+|.|++||||||+||..||+.||.++.+..+++|.|+|||||+||.++
T Consensus 660 fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnA 739 (790)
T KOG0056|consen 660 FPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNA 739 (790)
T ss_pred CchhhhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecc
Confidence 8 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCeEeeecCCCCC
Q 000522 1423 DEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1423 DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|.|+|+++|+|+|.|+|+|+
T Consensus 740 D~ILvi~~G~IvErG~HeeL 759 (790)
T KOG0056|consen 740 DLILVISNGRIVERGRHEEL 759 (790)
T ss_pred cEEEEEeCCeEeecCcHHHH
Confidence 99999999999999999987
No 34
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2e-68 Score=617.45 Aligned_cols=496 Identities=23% Similarity=0.357 Sum_probs=384.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHH
Q 000522 939 SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILN 1018 (1445)
Q Consensus 939 ~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~ 1018 (1445)
..-+..|.+..+...++..++.+.+++...++-+....+.+++.+...+++|.+..+|.+.+.+.+-...|...+...+.
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~ 153 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVF 153 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHH
Confidence 34567788899999999999999999999999999999999999999999999999999888877766666665555444
Q ss_pred HHHHHHHhHHHhhhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcH
Q 000522 1019 ILLANFVGLLGIAVVLSY-VQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSE 1097 (1445)
Q Consensus 1019 ~~~~~~~~~l~~~~~~~~-~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e 1097 (1445)
.++..++.+......+.+ ..+.++++.+.....|..+..+..+.....|+....+....-....|++.+-.+||+||.|
T Consensus 154 ~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE 233 (591)
T KOG0057|consen 154 NIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNE 233 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccH
Confidence 444443333322222222 2333333333333333221111111111112222223333345678999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHH
Q 000522 1098 DYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLG 1177 (1445)
Q Consensus 1098 ~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~ 1177 (1445)
++..++|...+..+.+......+....+.+.-..+.++.. +.+.+.+..+ ...+..+.|...+.-+...++..+++
T Consensus 234 ~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~---~~im~l~~~g-i~~~~mtvgdlv~~n~l~~qL~~~l~ 309 (591)
T KOG0057|consen 234 EYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVAL---TFIMVLGSNG-IAAGKMTVGDLVMVNSLLFQLSLPLN 309 (591)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHH---HHHHHHHhhh-hhhccccccchhhHHHHHHHHHhHHH
Confidence 9999999999988888776554443333333222222211 2222222222 22344566777777778888888898
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEEC
Q 000522 1178 NFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVG 1257 (1445)
Q Consensus 1178 ~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvG 1257 (1445)
.+-..+.++-+++.-.+-.+...+.... .... +.+.-+..|.|+|+||+|+|+|+ +++|+|+||+|++||||||||
T Consensus 310 ~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~--i~~~-~~~i~~~~~~I~F~dV~f~y~~k-~~iL~gvsf~I~kGekVaIvG 385 (591)
T KOG0057|consen 310 FLGSVYRELRQALTDMRTLFILLEVDED--IQEA-ALPIELFGGSIEFDDVHFSYGPK-RKVLKGVSFTIPKGEKVAIVG 385 (591)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhhhhhhh--hhhc-cCCcccCCCcEEEEeeEEEeCCC-CceecceeEEecCCCEEEEEC
Confidence 8888888888887777666554322111 1111 22223346789999999999865 469999999999999999999
Q ss_pred CCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCCC-CChHHHHHHHHHc
Q 000522 1258 RTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKC 1336 (1445)
Q Consensus 1258 rTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~-~sd~ei~~aL~~~ 1336 (1445)
+|||||||++++|+|+++ .+|+|+|||+||++++++.+|+.||+||||..||++||-+||.+++. .+|||+.++++++
T Consensus 386 ~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a 464 (591)
T KOG0057|consen 386 SNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRA 464 (591)
T ss_pred CCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHc
Confidence 999999999999999999 99999999999999999999999999999999999999999998875 6999999999999
Q ss_pred cHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEecc
Q 000522 1337 HVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAH 1414 (1445)
Q Consensus 1337 ~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaH 1414 (1445)
+++|.+.++ |++|.|||+|..||||||||++||||+||+|+|+++|||||+||.+||+.|.+.|.+...|+|+|+|+|
T Consensus 465 ~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH 544 (591)
T KOG0057|consen 465 GLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVH 544 (591)
T ss_pred CcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEe
Confidence 999999999 999999999999999999999999999999999999999999999999999999999889999999999
Q ss_pred ChhHHhhcCEEEEEeCCeEeeecCCCCCC
Q 000522 1415 RISTVLNMDEILILDHGHLPHCGCAAAPN 1443 (1445)
Q Consensus 1415 rl~ti~~~DrI~Vl~~G~vvE~G~p~~~~ 1443 (1445)
|++++++||+|++||+|+|.|.|+|+|+-
T Consensus 545 ~l~ll~~~DkI~~l~nG~v~e~gth~ell 573 (591)
T KOG0057|consen 545 RLDLLKDFDKIIVLDNGTVKEYGTHSELL 573 (591)
T ss_pred cchhHhcCCEEEEEECCeeEEeccHHHHh
Confidence 99999999999999999999999998873
No 35
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.8e-67 Score=680.71 Aligned_cols=538 Identities=21% Similarity=0.252 Sum_probs=443.7
Q ss_pred hHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 268 SLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 347 (1445)
Q Consensus 268 ~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~ 347 (1445)
.+++..++.+++.++...++.++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (686)
T TIGR03797 125 DLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLE 204 (686)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555566778888888999999999999999999999998764333344455666677777778888888888999999
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhHhHHHHHHHH
Q 000522 348 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGL 425 (1445)
Q Consensus 348 ~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~ 425 (1445)
.++...+...+|+|.++++...+.+.+.|++++.++ |++.+.+.... +..+...++-++ ++++++..-++.+++.+
T Consensus 205 ~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l 282 (686)
T TIGR03797 205 TRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALL-NLGLMFYYSWKLALVAV 282 (686)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888899999999987 88888875432 233444444433 33333333334444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 426 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 505 (1445)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 505 (1445)
+++++.+.+..++.+.+.+..++.++..+++.+.+.|.++|+++||.+|.|+.+.+++++..++..+...+......+..
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (686)
T TIGR03797 283 ALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLT 362 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555677888888899999999999999999999999999999999999988888876666666555555554443
Q ss_pred HHHHHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhh
Q 000522 506 FFWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 583 (1445)
Q Consensus 506 ~~~~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~ 583 (1445)
.+...... .+.++++|.|.+.++.+|.|.++++.+++..+..|+..++..+..+.+++++++|+.++++.++..+..
T Consensus 363 ~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~- 441 (686)
T TIGR03797 363 VFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEA- 441 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccC-
Confidence 33332222 233466788888889999999999999999999999999999999999999999999999765422110
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccC
Q 000522 584 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 663 (1445)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~ 663 (1445)
. ..+ ......++++|++|+|++++ +++|+|+||+|++||.++|+|+||||||||+++|+|+++|
T Consensus 442 ~--~~~----------~~~~~~I~~~nvsf~Y~~~~----~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p 505 (686)
T TIGR03797 442 K--TDP----------GKLSGAIEVDRVTFRYRPDG----PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP 505 (686)
T ss_pred c--CCC----------CCCCceEEEEEEEEEcCCCC----ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 0 000 11235799999999996432 3459999999999999999999999999999999999999
Q ss_pred CCeEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCC
Q 000522 664 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1445)
Q Consensus 664 ~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~ 730 (1445)
++|+|.++| .||||||+|++|+|||||||.+|++.++++..++++.|+++++++.+|+|++|.+||+
T Consensus 506 ~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 506 ESGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred CCCEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 999999987 5999999999999999999999988889999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCE
Q 000522 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1445)
Q Consensus 731 g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~ 810 (1445)
|.+|||||||||+||||++++|+|++||||||+||+++++++.+. +.. + ++|+|+||||++.++.||+|++|++|+
T Consensus 586 G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~-L~~-~--~~T~IiItHr~~~i~~~D~Iivl~~G~ 661 (686)
T TIGR03797 586 GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSES-LER-L--KVTRIVIAHRLSTIRNADRIYVLDAGR 661 (686)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHH-h--CCeEEEEecChHHHHcCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999988 433 2 589999999999999999999999999
Q ss_pred EEEecCHhHHHhccccCc
Q 000522 811 VKWIGSSADLAVSLYSGF 828 (1445)
Q Consensus 811 i~~~g~~~~~~~~~~~~~ 828 (1445)
|++.|+++|++++++.+.
T Consensus 662 iv~~G~~~~Ll~~~~~y~ 679 (686)
T TIGR03797 662 VVQQGTYDELMAREGLFA 679 (686)
T ss_pred EEEECCHHHHHhCCcHHH
Confidence 999999999987655443
No 36
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4e-68 Score=673.11 Aligned_cols=495 Identities=21% Similarity=0.269 Sum_probs=397.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHH
Q 000522 940 FYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNI 1019 (1445)
Q Consensus 940 ~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~ 1019 (1445)
.|+++++++.++..++.++..+.....+.+...+++.++++++++.|+++|++.++|++++|+++|++.+.......+..
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~ 116 (569)
T PRK10789 37 MWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLT 116 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34445555555666666776677777889999999999999999999999999999999999999999998766666666
Q ss_pred HHHHHHhHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHH
Q 000522 1020 LLANFVGLLGIAVVL-SYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSED 1098 (1445)
Q Consensus 1020 ~~~~~~~~l~~~~~~-~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~ 1098 (1445)
++..++..++.++++ .+.+|.+.++++..+.++..+.+.+.+..++..+......+.+.+.+.|+++|+++||+|++|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~ 196 (569)
T PRK10789 117 LVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLED 196 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccH
Confidence 665544444443333 3455554443333333333333333333333333344456778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-HHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHH
Q 000522 1099 YFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATM-AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLG 1177 (1445)
Q Consensus 1099 ~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~-~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~ 1177 (1445)
.+.+++.+..++..+..+.......+..........+...++..+ .... ..+..+.|.+..+..+...+..++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv-----~~g~lt~g~l~a~~~~~~~~~~pl~ 271 (569)
T PRK10789 197 RQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMV-----VNGSLTLGQLTSFVMYLGLMIWPML 271 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HcCCcCHHHHHHHHHHHHHHHHHHH
Confidence 999999998887777666554444433333222222111111111 1111 1244578888888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEEC
Q 000522 1178 NFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVG 1257 (1445)
Q Consensus 1178 ~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvG 1257 (1445)
.+...+.++.....+.+|+.++.+.+++........+ +..|.|+|+||+|+|+++.+++|+|+||+|+|||++||+|
T Consensus 272 ~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~~~~---~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG 348 (569)
T PRK10789 272 ALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSEPVP---EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICG 348 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCCC---CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEEC
Confidence 9999999999999999999999987654321111111 2356899999999998655679999999999999999999
Q ss_pred CCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCC-CCChHHHHHHHHHc
Q 000522 1258 RTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKC 1336 (1445)
Q Consensus 1258 rTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~-~~sd~ei~~aL~~~ 1336 (1445)
+||||||||+++|.|+++|++|+|.+||+|+++++.+++|+++++|||+|.+|+|||||||.++. ..+|++++++++.+
T Consensus 349 ~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~ 428 (569)
T PRK10789 349 PTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLA 428 (569)
T ss_pred CCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999998874 57899999999999
Q ss_pred cHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEecc
Q 000522 1337 HVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAH 1414 (1445)
Q Consensus 1337 ~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaH 1414 (1445)
++++++.++ |+||.+|++|.+||||||||++||||++++|+|||||||||+||+++++.+.+.|++..+++|+|+|||
T Consensus 429 ~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH 508 (569)
T PRK10789 429 SVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAH 508 (569)
T ss_pred CCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 999999988 999999999999999999999999999999999999999999999999999999998888999999999
Q ss_pred ChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1415 RISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1415 rl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|++++..||+|++|++|+++|.|+|+++
T Consensus 509 ~~~~~~~~d~i~~l~~G~i~~~g~~~~l 536 (569)
T PRK10789 509 RLSALTEASEILVMQHGHIAQRGNHDQL 536 (569)
T ss_pred chhHHHcCCEEEEEeCCEEEEecCHHHH
Confidence 9999999999999999999999998765
No 37
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.1e-67 Score=682.23 Aligned_cols=545 Identities=20% Similarity=0.213 Sum_probs=446.4
Q ss_pred HHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 270 VRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLK 349 (1445)
Q Consensus 270 ~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ 349 (1445)
++..++.+++.++..++..++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+++.+
T Consensus 145 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (710)
T TIGR03796 145 LWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRRLQIK 224 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445666777888888999999999999999999999876533333345556666667777888888888999999999
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHH
Q 000522 350 LRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAIT 428 (1445)
Q Consensus 350 ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~~ 428 (1445)
+...+...+|+|.++++...+.+.+.|+++|.++.| +.+.++.. .+..+....+.+++.+++++..-++.+++.++.+
T Consensus 225 ~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~ 303 (710)
T TIGR03796 225 LAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGIAFA 303 (710)
T ss_pred HHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888889999999999888 66776543 3444444444444444444443344444444545
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 429 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 508 (1445)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 508 (1445)
++.+.+..++.++..+..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++.+.++.+...+......+...+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (710)
T TIGR03796 304 AINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILGVLP 383 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556677788888888899999999999999999999999999999999999999988888887776665555444333
Q ss_pred HHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhc
Q 000522 509 ATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 586 (1445)
Q Consensus 509 ~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~ 586 (1445)
..... .+.++++|+|.+.++.+|.|.++++++++..+..|+..++..+..+.++..+++|+.++++.++..+.....
T Consensus 384 ~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~~- 462 (710)
T TIGR03796 384 TLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEEEE- 462 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc-
Confidence 22222 234567788888889999999999999999999999999999999999999999999999765432211000
Q ss_pred CCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCe
Q 000522 587 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 666 (1445)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G 666 (1445)
.+. ............++++|++|+|++.+ +++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|
T Consensus 463 -~~~---~~~~~~~~~~~~I~~~~vsf~y~~~~----~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G 534 (710)
T TIGR03796 463 -APA---AGSEPSPRLSGYVELRNITFGYSPLE----PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSG 534 (710)
T ss_pred -ccc---cccccCCCCCCeEEEEEEEEecCCCC----CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc
Confidence 000 00000011245799999999997532 3459999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCC-CCChhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000522 667 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1445)
Q Consensus 667 ~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~ 732 (1445)
+|.++| .|+||||+|++|++||||||.++. +.+++++.++++.|+++++++.+|+|++|.+||+|.
T Consensus 535 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~ 614 (710)
T TIGR03796 535 EILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGA 614 (710)
T ss_pred EEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCC
Confidence 999987 599999999999999999999875 578899999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEE
Q 000522 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1445)
Q Consensus 733 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~ 812 (1445)
+|||||||||+||||++++|+|++||||||+||+++++++++.+ .. +++|+|+||||++.++.||+|++|++|+|+
T Consensus 615 ~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l-~~---~~~T~IiitHrl~~i~~~D~Iivl~~G~i~ 690 (710)
T TIGR03796 615 NLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNL-RR---RGCTCIIVAHRLSTIRDCDEIIVLERGKVV 690 (710)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHH-Hh---cCCEEEEEecCHHHHHhCCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999984 22 479999999999999999999999999999
Q ss_pred EecCHhHHHhccccCc
Q 000522 813 WIGSSADLAVSLYSGF 828 (1445)
Q Consensus 813 ~~g~~~~~~~~~~~~~ 828 (1445)
+.|+++|+++..+.+.
T Consensus 691 ~~G~~~~Ll~~~~~y~ 706 (710)
T TIGR03796 691 QRGTHEELWAVGGAYA 706 (710)
T ss_pred EecCHHHHHHcCCcHH
Confidence 9999999987655443
No 38
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=4e-67 Score=664.77 Aligned_cols=528 Identities=22% Similarity=0.281 Sum_probs=411.4
Q ss_pred HHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000522 905 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 984 (1445)
Q Consensus 905 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ 984 (1445)
+++.++..++....++.+++..+..... .....++..++++.++..+..++..........+...++++++++++++
T Consensus 25 ~~~~~~~~~~~~~~p~~~~~iid~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l~~ 101 (585)
T TIGR01192 25 VIANITLAAITIAEPILFGRIIDAISSK---SDVLPTLALWAGFGVFNTIAYVLVAREADRLAHGRRATLLTEAFGRIIS 101 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 3444555556666666666555532111 1111222222233333333333444444455555666677799999999
Q ss_pred CcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 985 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1064 (1445)
Q Consensus 985 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr 1064 (1445)
.|++||+++++|++++|+++|++.+.+.+...+...+..++.+++.++++++.+|.++++++.+.+++..+.+.+.+..+
T Consensus 102 l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~~~~~~~~~~~~~~~ 181 (585)
T TIGR01192 102 MPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMVLGILYILIAKLVMQRTK 181 (585)
T ss_pred CCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999887777776666666666666666777777666555555555555555666566
Q ss_pred HHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000522 1065 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA 1144 (1445)
Q Consensus 1065 ~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~ 1144 (1445)
+..+......+.+.+++.|+++|+++||+||.++.+.+++.+..++..+..+.......+......++..+...++..+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g 261 (585)
T TIGR01192 182 NGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLNRMASTISMMCILVIG 261 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666777889999999999999999999999999998888877766655443333333222222222111111111
Q ss_pred HHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCC-CCccE
Q 000522 1145 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWP-FQGLI 1223 (1445)
Q Consensus 1145 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp-~~g~I 1223 (1445)
... ...+..+.|.+..++.++..+..++..+...+.++.....+.+|+.++.+.+++...... + ..++ ..+.|
T Consensus 262 ~~~----v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-~-~~~~~~~~~i 335 (585)
T TIGR01192 262 TVL----VIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPAD-A-PELPNVKGAV 335 (585)
T ss_pred HHH----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcc-C-CCCCCCCCeE
Confidence 100 012446788888888888889999999999999999999999999999876554311111 1 1122 35689
Q ss_pred EEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEE
Q 000522 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1445)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1445)
+|+||+|+|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+|+.+++.+++|+++++|
T Consensus 336 ~~~~v~~~y~~~-~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v 414 (585)
T TIGR01192 336 EFRHITFEFANS-SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTRESLRKSIATV 414 (585)
T ss_pred EEEEEEEECCCC-CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCHHHHHhheEEE
Confidence 999999999753 4699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcccCccHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000522 1304 PQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1380 (1445)
Q Consensus 1304 pQdp~lF~gTIReNLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1380 (1445)
||||.+|++|+||||.++. ..+|++++++++.+++++++.++ |+||.++++|.+||||||||++|||||+++|+|||
T Consensus 415 ~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lARall~~p~ili 494 (585)
T TIGR01192 415 FQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIARAILKNAPILV 494 (585)
T ss_pred ccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998864 46899999999999999999888 99999999999999999999999999999999999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1381 LDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1381 LDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||||+||.+|++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|+++
T Consensus 495 lDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 556 (585)
T TIGR01192 495 LDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQEL 556 (585)
T ss_pred EECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999988889999999999999999999999999999999998765
No 39
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.3e-66 Score=675.27 Aligned_cols=535 Identities=21% Similarity=0.288 Sum_probs=444.8
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1445)
Q Consensus 269 l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~ 348 (1445)
.++..++.+++.+....++.++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (694)
T TIGR03375 137 WFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDVAGK 216 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677888888888999999999999999999999987543333344455556666677778888888888999999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhHhHHHHHHHHH
Q 000522 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGLA 426 (1445)
Q Consensus 349 ~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~ 426 (1445)
++...+...+|+|.++++... .+.++|++++.+ .|++.+.+.... +..+...++-++..++++ ..-++.+++.++
T Consensus 217 ~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~l~li~l~ 293 (694)
T TIGR03375 217 KADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIA-IIGGPLVWVPLV 293 (694)
T ss_pred HHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHH
Confidence 999999999999999999877 677899999998 799999986542 333444444444333333 333344444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 427 ITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVF 506 (1445)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 506 (1445)
++++.+.+..++.++..+..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++..++..+...+..........
T Consensus 294 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (694)
T TIGR03375 294 AIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNLATN 373 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556667778888999999999999999999999999999999999999999999999888777777776666555443
Q ss_pred HHHHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhh
Q 000522 507 FWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQ 584 (1445)
Q Consensus 507 ~~~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~ 584 (1445)
+...... .+.++++|+|.+.++.+|+|.+++++.++..+..|+..++..+..+.+++++++|+.++++.++..+....
T Consensus 374 ~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~~ 453 (694)
T TIGR03375 374 FAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPEGTR 453 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 3333222 23356778888888999999999999999999999999999999999999999999999987643211000
Q ss_pred hcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCC
Q 000522 585 AANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT 664 (1445)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~ 664 (1445)
... .......|+++|++|+|+.. + +++|+|+||+|++||.++|+|+||||||||+++|+|+++|+
T Consensus 454 ---~~~--------~~~~~~~I~~~~vsf~Y~~~-~---~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~ 518 (694)
T TIGR03375 454 ---FLH--------RPRLQGEIEFRNVSFAYPGQ-E---TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT 518 (694)
T ss_pred ---CCC--------CCCccceEEEEEEEEEeCCC-C---ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 000 01223579999999999642 1 34599999999999999999999999999999999999999
Q ss_pred CeEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCC
Q 000522 665 HGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1445)
Q Consensus 665 ~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~ 730 (1445)
+|+|.++| .|+||||+|++|++||+|||.++++ .+++++.++++.|+++++++.+|+|++|.+||+
T Consensus 519 ~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 519 EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred CceEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 99999987 6999999999999999999999976 789999999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCE
Q 000522 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1445)
Q Consensus 731 g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~ 810 (1445)
|.+||||||||++||||++++|+|++||||||+||+++++++.+. +.. ..+++|+|+||||++.++.||+|++|++|+
T Consensus 599 G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~-l~~-~~~~~T~iiItHrl~~~~~~D~iivl~~G~ 676 (694)
T TIGR03375 599 GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDR-LKR-WLAGKTLVLVTHRTSLLDLVDRIIVMDNGR 676 (694)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHH-HhCCCEEEEEecCHHHHHhCCEEEEEeCCE
Confidence 999999999999999999999999999999999999999999887 443 456899999999999999999999999999
Q ss_pred EEEecCHhHHHhc
Q 000522 811 VKWIGSSADLAVS 823 (1445)
Q Consensus 811 i~~~g~~~~~~~~ 823 (1445)
++++|+++|+++.
T Consensus 677 i~e~G~~~eLl~~ 689 (694)
T TIGR03375 677 IVADGPKDQVLEA 689 (694)
T ss_pred EEeeCCHHHHHHH
Confidence 9999999999764
No 40
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=3.7e-66 Score=669.27 Aligned_cols=535 Identities=19% Similarity=0.188 Sum_probs=423.2
Q ss_pred HHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 274 CCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSS 353 (1445)
Q Consensus 274 ~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~ 353 (1445)
.+.+++.++...++.++..++..+.|++++.++|.+..+.+.......+..++++.++..++.....+...+.+.++...
T Consensus 156 ~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 235 (711)
T TIGR00958 156 SGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNYTMARINLR 235 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667777888999999999999999999998865332222222233334444555555555556666777788888
Q ss_pred HHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHH
Q 000522 354 IMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLI 432 (1445)
Q Consensus 354 L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~~~~~~ 432 (1445)
+...+|+|.++.+...+++.++|++.|.++.|++.+.+.+ ..+..++...+.+++++++++..-...+++.++.+++..
T Consensus 236 lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l~~ 315 (711)
T TIGR00958 236 IREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPLVF 315 (711)
T ss_pred HHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 8899999999999988888899999999999999998765 345556655556555444443322222333333333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000522 433 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATT- 511 (1445)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~- 511 (1445)
.+..++.++..+..++..+..++..+...|.++|+++||.|++|+.+.+++++..++-.+...+.....+.........
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (711)
T TIGR00958 316 LAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSVLG 395 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777888888888899999999999999999999999999999887777665444443333332222222221111
Q ss_pred -HHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcCCCC
Q 000522 512 -PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 590 (1445)
Q Consensus 512 -~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~ 590 (1445)
...+.++.+|.|.+.++.++++.+++++.+...+..|+..++..+..+.++.++.+||.+|++.++..+.... ..+
T Consensus 396 ~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~--~~~- 472 (711)
T TIGR00958 396 MLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGT--LAP- 472 (711)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCC--CCC-
Confidence 1223445677888888999999999999999999999999999999999999999999999976543221000 000
Q ss_pred cccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEE
Q 000522 591 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 670 (1445)
Q Consensus 591 ~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~ 670 (1445)
.+....|+++|++|+|++.++ +++|+|+||++++||.++||||||||||||+++|+|+++|++|+|.+
T Consensus 473 ---------~~~~~~I~~~nVsf~Y~~~~~---~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i 540 (711)
T TIGR00958 473 ---------LNLEGLIEFQDVSFSYPNRPD---VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLL 540 (711)
T ss_pred ---------CCCCCeEEEEEEEEECCCCCC---CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEE
Confidence 122356999999999975322 34699999999999999999999999999999999999999999999
Q ss_pred cC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000522 671 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1445)
Q Consensus 671 ~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSG 736 (1445)
+| +|+||||+|++|++||||||.+|.+ .+++++.++++.++++++++.+|+|++|.+||+|.+|||
T Consensus 541 dg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 620 (711)
T TIGR00958 541 DGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSG 620 (711)
T ss_pred CCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCH
Confidence 87 5999999999999999999999964 677899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecC
Q 000522 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 816 (1445)
Q Consensus 737 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~ 816 (1445)
|||||++||||++++|+|+|||||||+||+++++.+.+. . ..+++|+|+||||++.+..||+|++|++|+|+++|+
T Consensus 621 GQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~~-~---~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt 696 (711)
T TIGR00958 621 GQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQES-R---SRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGT 696 (711)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHHh-h---ccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeC
Confidence 999999999999999999999999999999999988872 1 346899999999999999999999999999999999
Q ss_pred HhHHHhccccC
Q 000522 817 SADLAVSLYSG 827 (1445)
Q Consensus 817 ~~~~~~~~~~~ 827 (1445)
++|++++++.+
T Consensus 697 ~~eL~~~~~~y 707 (711)
T TIGR00958 697 HKQLMEDQGCY 707 (711)
T ss_pred HHHHHhCCCch
Confidence 99998765544
No 41
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.7e-66 Score=652.84 Aligned_cols=522 Identities=19% Similarity=0.209 Sum_probs=400.6
Q ss_pred HHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 000522 907 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 986 (1445)
Q Consensus 907 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p 986 (1445)
+.++........++.+....+..-..........++.+++++.++..++.+++.+.....+.+...++++++++++++.|
T Consensus 14 ~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~ 93 (544)
T TIGR01842 14 FSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASFSAT 93 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 33444445555566665555432111111122234445555666677778888888888999999999999999999999
Q ss_pred ccccccCChhHHHHHHHhhHHHHhhhhHH-HHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 987 VLFFDQTPGGRILNRFSSDLYMIDDSLPF-ILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRE 1065 (1445)
Q Consensus 987 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~-~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~ 1065 (1445)
+.. .|...+++++|++.+.+.+.. .+..++..++.++. ++++++.+|++.++++...+++..+..+..+..+.
T Consensus 94 ~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~~~~ 167 (544)
T TIGR01842 94 LRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIY-LLVCFLLHPWIGILALGGAVVLVGLALLNNRATKK 167 (544)
T ss_pred ccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 842 366789999999999887655 34444444443333 34455666665443332222222222222332233
Q ss_pred HHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Q 000522 1066 LRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAV 1145 (1445)
Q Consensus 1066 l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v 1145 (1445)
..+...+..+...+++.|+++|+++||+||.|+.+.+++.+..++..+..+.......+......++..+...++..+..
T Consensus 168 ~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 247 (544)
T TIGR01842 168 PLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLGLGA 247 (544)
T ss_pred HHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334455667788999999999999999999999999998888877666554444433333333322211111111111
Q ss_pred HhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEE
Q 000522 1146 IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEF 1225 (1445)
Q Consensus 1146 ~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f 1225 (1445)
.. ...+..++|.+..++.+...+..++..+...+.++.....+.+|+.++.+.++|..... .. -+..+.|++
T Consensus 248 ~l----~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~-~~---~~~~~~i~~ 319 (544)
T TIGR01842 248 YL----AIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAM-PL---PEPEGHLSV 319 (544)
T ss_pred HH----HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCC-CC---CCCCCeEEE
Confidence 00 01245678888888999999999999999999999999999999999998766532111 11 123568999
Q ss_pred EEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcC
Q 000522 1226 QNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQ 1305 (1445)
Q Consensus 1226 ~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQ 1305 (1445)
+||+|+|+++.+++|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||+|+.+++.+.+|+++++|||
T Consensus 320 ~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q 399 (544)
T TIGR01842 320 ENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLPQ 399 (544)
T ss_pred EEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEecC
Confidence 99999997655689999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccCccHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000522 1306 SPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1445)
Q Consensus 1306 dp~lF~gTIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1445)
||++|++|+|||+.++++ .+|++++++++.++++++++++ |+||.++|+|.+||||||||++||||++++|+|||||
T Consensus 400 ~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ililD 479 (544)
T TIGR01842 400 DVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVLD 479 (544)
T ss_pred CcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999999986654 7899999999999999999999 9999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1383 ECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1383 EaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||+||+++++.+.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|+++
T Consensus 480 Epts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l 540 (544)
T TIGR01842 480 EPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEV 540 (544)
T ss_pred CCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHH
Confidence 9999999999999999998875 68999999999999999999999999999999998764
No 42
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.3e-65 Score=667.22 Aligned_cols=536 Identities=21% Similarity=0.245 Sum_probs=434.4
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 272 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 351 (1445)
Q Consensus 272 ~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir 351 (1445)
..++.+++.++...+..++..++.++.|++++.++|.+.........+.++++++++.++..++.....+...+++.++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (708)
T TIGR01193 149 PLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNVLGQRLS 228 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566777788888889999999999999999999987653333333445555666677778888888888899999999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHH
Q 000522 352 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 429 (1445)
Q Consensus 352 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~~~ 429 (1445)
..+...+|+|.++++...+.+.+.|++++.++ |.+.+.+.... +..+...++.++..+++++... +.+++.+++++
T Consensus 229 ~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~l~li~l~~~~ 306 (708)
T TIGR01193 229 IDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNM-LLFLLSLLSIP 306 (708)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH-HHHHHHHHHHH
Confidence 99999999999999999888899999999998 99998875432 2223344444433333333222 22333333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 430 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 509 (1445)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 509 (1445)
+.+.+..++.++.++..++.++..+++.+...|.++|+++||.+|+|+.+.+++++...+..+...+..........+..
T Consensus 307 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (708)
T TIGR01193 307 VYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQAIKA 386 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455677788888999999999999999999999999999999999999888877765555554444443333322222
Q ss_pred HHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcC
Q 000522 510 TTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 587 (1445)
Q Consensus 510 ~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~ 587 (1445)
... ..+.++++|+|.+.++.+|+|.++++.++...+..|+..+...+..+.+++++.+|+.++++.++..+.....
T Consensus 387 ~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~~~-- 464 (708)
T TIGR01193 387 VTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKKKR-- 464 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccc--
Confidence 221 2234567888988899999999999999999999999999999999999999999999999765432211000
Q ss_pred CCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeE
Q 000522 588 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 667 (1445)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~ 667 (1445)
.+ .....+.|+++|++|+|+.+ +++|+|+||+|++|+.++|+|+||||||||+++|+|+++|++|+
T Consensus 465 ~~---------~~~~~~~I~~~~vsf~y~~~-----~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~ 530 (708)
T TIGR01193 465 TE---------LNNLNGDIVINDVSYSYGYG-----SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGE 530 (708)
T ss_pred cC---------CCCCCCcEEEEEEEEEcCCC-----CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcE
Confidence 00 01234579999999999632 24599999999999999999999999999999999999999999
Q ss_pred EEEcC-------------eEEEEcCCCCCCCccHHHHHhcCC--CCChhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000522 668 IHASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1445)
Q Consensus 668 i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~--~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~ 732 (1445)
|.++| .|+||||+|++|++||||||.+|. +.+++++.++++.++++++++.+|+|++|.+||+|.
T Consensus 531 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~ 610 (708)
T TIGR01193 531 ILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGS 610 (708)
T ss_pred EEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCC
Confidence 99987 599999999999999999999983 467889999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEE
Q 000522 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1445)
Q Consensus 733 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~ 812 (1445)
+|||||||||+||||++++|+|++||||||+||+++++++.+.+ .. . +++|+|+||||++.+..||+|++|++|+++
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L-~~-~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~ 687 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNL-LN-L-QDKTIIFVAHRLSVAKQSDKIIVLDHGKII 687 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHH-HH-h-cCCEEEEEecchHHHHcCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999874 33 3 689999999999999999999999999999
Q ss_pred EecCHhHHHhccccCc
Q 000522 813 WIGSSADLAVSLYSGF 828 (1445)
Q Consensus 813 ~~g~~~~~~~~~~~~~ 828 (1445)
+.|+++|+++..+.+.
T Consensus 688 ~~G~~~~L~~~~~~y~ 703 (708)
T TIGR01193 688 EQGSHDELLDRNGFYA 703 (708)
T ss_pred EECCHHHHHhcCCcHH
Confidence 9999999987655443
No 43
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.3e-64 Score=645.65 Aligned_cols=540 Identities=18% Similarity=0.199 Sum_probs=430.5
Q ss_pred HHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 271 RAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKL 350 (1445)
Q Consensus 271 ~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~i 350 (1445)
...++.+++.++..++..++..++..+.|++++.+++.+..+........++.+++++.++..++.....+...+++.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 96 (582)
T PRK11176 17 WPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVSGKV 96 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555667777777777777777888899999999987654322222222333344455666666666667788899999
Q ss_pred HHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHH
Q 000522 351 RSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITI 429 (1445)
Q Consensus 351 r~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~~~ 429 (1445)
...+...+|+|.++++.....+.+.|++++.++.|++.+.+.. ..+..++..++.+++.+.+++..-++.+++.+++++
T Consensus 97 ~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~ 176 (582)
T PRK11176 97 VMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIVIAP 176 (582)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998888999999999999999998754 445556666666655555444433333343444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 430 LLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWA 509 (1445)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~ 509 (1445)
+.+.+..++.+++++..++.++..++..+...|.++|+++||.+|+|+.+.+++++.-++-.+...+..........+..
T Consensus 177 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (582)
T PRK11176 177 IVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDPIIQ 256 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555667788888888899999999999999999999999999999988888877654444444444333333322222
Q ss_pred HHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcC
Q 000522 510 TTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAAN 587 (1445)
Q Consensus 510 ~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~ 587 (1445)
... ..+.++.++.|.+..+.++++.+.+.++++..+..|+..+...+..+.+++.+++|+.++++.++..+...
T Consensus 257 ~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~---- 332 (582)
T PRK11176 257 LIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGK---- 332 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCC----
Confidence 221 22344566777777889999999999999999999999999999999999999999999997654321100
Q ss_pred CCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeE
Q 000522 588 SPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGS 667 (1445)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~ 667 (1445)
.. .+.....++++|++|+|++. + +++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+
T Consensus 333 ~~---------~~~~~~~i~~~~vsf~y~~~-~---~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~ 399 (582)
T PRK11176 333 RV---------IERAKGDIEFRNVTFTYPGK-E---VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGE 399 (582)
T ss_pred cC---------CCCCCCeEEEEEEEEecCCC-C---CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCce
Confidence 00 01123469999999999643 1 34599999999999999999999999999999999999999999
Q ss_pred EEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCC--CChhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000522 668 IHASG-------------SIAYVPQVPWILSGTIRDNILFGKN--YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1445)
Q Consensus 668 i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~--~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~ 732 (1445)
|.++| .|+||||+|.+|++||||||.+|.+ +++++++++++.++++++++.+|+|++|.+||+|.
T Consensus 400 I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~ 479 (582)
T PRK11176 400 ILLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGV 479 (582)
T ss_pred EEECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCC
Confidence 99987 5899999999999999999999853 78899999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEE
Q 000522 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1445)
Q Consensus 733 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~ 812 (1445)
+||||||||++||||+|++|+|++|||||||||+++++.+++. +.. +.+++|+|+||||++.++.||+|++|++|+++
T Consensus 480 ~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~-l~~-~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~ 557 (582)
T PRK11176 480 LLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAA-LDE-LQKNRTSLVIAHRLSTIEKADEILVVEDGEIV 557 (582)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999887 433 44679999999999999999999999999999
Q ss_pred EecCHhHHHhccccCcc
Q 000522 813 WIGSSADLAVSLYSGFW 829 (1445)
Q Consensus 813 ~~g~~~~~~~~~~~~~~ 829 (1445)
+.|+++++++..+.+.+
T Consensus 558 e~g~~~~l~~~~~~y~~ 574 (582)
T PRK11176 558 ERGTHAELLAQNGVYAQ 574 (582)
T ss_pred EeCCHHHHHhCCChHHH
Confidence 99999999877654443
No 44
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=5e-67 Score=621.93 Aligned_cols=458 Identities=26% Similarity=0.366 Sum_probs=343.9
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCC----CeEEEEcC--------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT----HGSIHASG-------- 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~----~G~i~~~~-------- 672 (1445)
.++++|.+..|..... + ..+++||||++.+||+++|||.|||||||+.++|+|..++. +|+|.++|
T Consensus 5 lL~V~nL~v~~~~~~~-~-~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~ 82 (539)
T COG1123 5 LLEVENLTVEFATDGG-R-VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSE 82 (539)
T ss_pred eEEEeceEEEEecCCc-c-eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCH
Confidence 6789999998876522 2 35799999999999999999999999999999999999887 79998876
Q ss_pred ---------eEEEEcCCCC-CCCc--cHHHHHh----cCCCC----ChhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000522 673 ---------SIAYVPQVPW-ILSG--TIRDNIL----FGKNY----DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1445)
Q Consensus 673 ---------~i~y~~Q~p~-l~~~--ti~~nI~----~g~~~----~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~ 732 (1445)
.|||++|+|+ .+|. ||.+-|. ..... ..++..+.++..+|.+.... .....
T Consensus 83 ~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPh 153 (539)
T COG1123 83 REMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPH 153 (539)
T ss_pred HHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCc
Confidence 5999999997 4554 7777664 22222 12334445556666543322 44667
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEE
Q 000522 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 811 (1445)
Q Consensus 733 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i 811 (1445)
.|||||||||.||+|+..+|+++|+||||+|||+.++.+|++.+.......|.++|+|||++..+.+ ||+|+||.+|++
T Consensus 154 eLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~i 233 (539)
T COG1123 154 QLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEI 233 (539)
T ss_pred ccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEE
Confidence 9999999999999999999999999999999999999999987432223457799999999999887 999999999999
Q ss_pred EEecCHhHHHhccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcCccchhhHHH
Q 000522 812 KWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKN 891 (1445)
Q Consensus 812 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~ 891 (1445)
+|.|+.+++..+...-
T Consensus 234 VE~G~~~~i~~~p~hp---------------------------------------------------------------- 249 (539)
T COG1123 234 VETGPTEEILSNPQHP---------------------------------------------------------------- 249 (539)
T ss_pred EEecCHHHHHhccCCc----------------------------------------------------------------
Confidence 9999999886431100
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 892 YAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAA 971 (1445)
Q Consensus 892 y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s 971 (1445)
|-+. + |... ........
T Consensus 250 YT~~----------L------------------l~a~-p~~~~~~~---------------------------------- 266 (539)
T COG1123 250 YTRG----------L------------------LAAV-PRLGDEKI---------------------------------- 266 (539)
T ss_pred ccHH----------H------------------HhhC-CCcccccc----------------------------------
Confidence 0000 0 0000 00000000
Q ss_pred HHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHH
Q 000522 972 VKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFI 1051 (1445)
Q Consensus 972 ~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~ 1051 (1445)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 000522 1052 YSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQL 1131 (1445)
Q Consensus 1052 ~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~ 1131 (1445)
T Consensus 267 -------------------------------------------------------------------------------- 266 (539)
T COG1123 267 -------------------------------------------------------------------------------- 266 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCC
Q 000522 1132 LAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQ 1211 (1445)
Q Consensus 1132 l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~ 1211 (1445)
. . .+.+
T Consensus 267 -------------------~--~-----------------------------------------------~~~~------ 272 (539)
T COG1123 267 -------------------I--R-----------------------------------------------LPRR------ 272 (539)
T ss_pred -------------------c--c-----------------------------------------------cccc------
Confidence 0 0 0000
Q ss_pred CCCCCCCCCccEEEEEEEEEeCCC---------CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE
Q 000522 1212 SLSPDWPFQGLIEFQNVTMRYKPS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQIL 1282 (1445)
Q Consensus 1212 ~~~~~wp~~g~I~f~nVs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ 1282 (1445)
.+. +....++++|++.+|... ...+++||||++++||.+||||.||||||||.++|+|+++|++|+|.
T Consensus 273 ~~~---~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~~G~i~ 349 (539)
T COG1123 273 GPL---RAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPSSGSII 349 (539)
T ss_pred ccc---ccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE
Confidence 000 012358899999999741 24689999999999999999999999999999999999999999999
Q ss_pred ECCee--CCCCChHhhhcceEEEcCCCcc--c-CccHHHhcC-CCCCCChHHHHHHHHHccHHHHHHhCCCch-hhhcCC
Q 000522 1283 VDGLN--IINTPVRDLRGRFAVVPQSPFL--F-EGSLRDNLD-PFHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESG 1355 (1445)
Q Consensus 1283 IDG~d--i~~i~~~~lR~~i~~VpQdp~l--F-~gTIReNLd-p~~~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G 1355 (1445)
++|.| .+.-....+|+++-+|.|||+- - ..||+++|. |...+.... .+-.+..+.+.++..||.. ..+...
T Consensus 350 ~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~--~~~~~~rv~~ll~~VgL~~~~l~ryP 427 (539)
T COG1123 350 FDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGS--GAERRARVAELLELVGLPPEFLDRYP 427 (539)
T ss_pred EeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccc--hHHHHHHHHHHHHHcCCCHHHHhcCc
Confidence 99977 3333355678899999999973 2 259999984 222111100 0111112223333335655 355667
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCe
Q 000522 1356 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGH 1432 (1445)
Q Consensus 1356 ~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1432 (1445)
..||||||||+||||||..+|++||+|||||+||+-+...|.+.|.+..+ |.|.|+|||++..++. ||||+||++|+
T Consensus 428 ~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~vV~~i~drv~vm~~G~ 507 (539)
T COG1123 428 HELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAVVRYIADRVAVMYDGR 507 (539)
T ss_pred hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHhhCceEEEEECCe
Confidence 78999999999999999999999999999999999999999999877543 7999999999999986 89999999999
Q ss_pred EeeecCC
Q 000522 1433 LPHCGCA 1439 (1445)
Q Consensus 1433 vvE~G~p 1439 (1445)
|||.|+.
T Consensus 508 iVE~G~~ 514 (539)
T COG1123 508 IVEEGPT 514 (539)
T ss_pred EEEeCCH
Confidence 9999954
No 45
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=2.6e-64 Score=642.32 Aligned_cols=534 Identities=20% Similarity=0.230 Sum_probs=438.1
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 272 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 351 (1445)
Q Consensus 272 ~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir 351 (1445)
.+++.+++.++..+++.++..++...+|++++.+++...........+.+++.++++.++..++.....+...+.+.++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 86 (571)
T TIGR02203 7 SYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVV 86 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667788888888999999999999999999999865543322233334444555666677777777788889999999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHH
Q 000522 352 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITIL 430 (1445)
Q Consensus 352 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~~~~ 430 (1445)
..+...+|+|.++.+.....+.+.|++.|.++.|++++.+... .+..++...+.+++++.+++..-.+.+++.++++++
T Consensus 87 ~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l 166 (571)
T TIGR02203 87 RDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPV 166 (571)
T ss_pred HHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 9999999999999999888888999999999999999987653 455555555555554444444333333444444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 431 LIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWAT 510 (1445)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~ 510 (1445)
.+.+..++.++.++..++..+..+++.+.++|.++|+++||.++.|+.+.+++++..++..+...+..........+...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (571)
T TIGR02203 167 LSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQL 246 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55667788888889999999999999999999999999999999999988888887666665555544444433333222
Q ss_pred HH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcCC
Q 000522 511 TP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANS 588 (1445)
Q Consensus 511 ~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~ 588 (1445)
.. ..+.++.+|.+.+..+.+|++.+++++.++..+..|+..+...+..+.+++++++|+.++++.++..+... .
T Consensus 247 ~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~----~ 322 (571)
T TIGR02203 247 IASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGT----R 322 (571)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC----C
Confidence 22 22345667778888899999999999999999999999999999999999999999999997654322100 0
Q ss_pred CCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEE
Q 000522 589 PSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSI 668 (1445)
Q Consensus 589 ~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i 668 (1445)
+. ...+..++++|++|+|++.+ +++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|
T Consensus 323 ~~---------~~~~~~i~~~~v~f~y~~~~----~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I 389 (571)
T TIGR02203 323 AI---------ERARGDVEFRNVTFRYPGRD----RPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQI 389 (571)
T ss_pred CC---------CCCCCeEEEEEEEEEcCCCC----CccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeE
Confidence 00 11234699999999996532 245999999999999999999999999999999999999999999
Q ss_pred EEcC-------------eEEEEcCCCCCCCccHHHHHhcCC--CCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000522 669 HASG-------------SIAYVPQVPWILSGTIRDNILFGK--NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 733 (1445)
Q Consensus 669 ~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~--~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~ 733 (1445)
.++| .|+||||+|++|++||||||.++. +.++++++++++.|++++++..+|+|.+|.+|++|.+
T Consensus 390 ~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~ 469 (571)
T TIGR02203 390 LLDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVL 469 (571)
T ss_pred EECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCc
Confidence 9987 499999999999999999999985 5889999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEE
Q 000522 734 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKW 813 (1445)
Q Consensus 734 LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~ 813 (1445)
||||||||++||||++++|+|++||||||+||+++++++.+. +.. ..+++|+|+|||+.+.+..||+|++|++|++++
T Consensus 470 LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~-L~~-~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~ 547 (571)
T TIGR02203 470 LSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAA-LER-LMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVE 547 (571)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHH-HhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEe
Confidence 999999999999999999999999999999999999999887 433 456899999999999999999999999999999
Q ss_pred ecCHhHHHhcc
Q 000522 814 IGSSADLAVSL 824 (1445)
Q Consensus 814 ~g~~~~~~~~~ 824 (1445)
.|+++++++..
T Consensus 548 ~g~~~~l~~~~ 558 (571)
T TIGR02203 548 RGTHNELLARN 558 (571)
T ss_pred eCCHHHHHHcC
Confidence 99999987653
No 46
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=9.1e-65 Score=688.80 Aligned_cols=529 Identities=19% Similarity=0.228 Sum_probs=404.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 898 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 977 (1445)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ 977 (1445)
+..+++.+++.++..++....++.+...++... .......+...+++++++..++.+++.+++.+.+.+...+++.+
T Consensus 59 ~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lR~~ 135 (1466)
T PTZ00265 59 RKLLGVSFVCATISGGTLPFFVSVFGVIMKNMN---LGENVNDIIFSLVLIGIFQFILSFISSFCMDVVTTKILKTLKLE 135 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334444444444555555555555555554321 11123344556667777788888899999999999999999999
Q ss_pred HHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 978 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1057 (1445)
Q Consensus 978 ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~ 1057 (1445)
++++++++|++|||..+.|++.+|++.|++.+...+...+..++..++.+++.++++++.+|.+.++++.++.+++.+..
T Consensus 136 ~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv~l~~~pl~~~~~~ 215 (1466)
T PTZ00265 136 FLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLCITCVFPLIYICGV 215 (1466)
T ss_pred HHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988888888888888888888888888766554444443333333
Q ss_pred HHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 000522 1058 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII 1137 (1445)
Q Consensus 1058 ~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~ 1137 (1445)
.+.+..+...+......+...+.+.|+++|+++||+|+.|+++.++|.+..+...+..+.......+......++..+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~ 295 (1466)
T PTZ00265 216 ICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIGMINGFILASY 295 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444344444444455677889999999999999999999999999988888777766554443332222222221111
Q ss_pred HHHHHHH-HHhhcCC---CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCC
Q 000522 1138 SFIATMA-VIGSRGN---LPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSL 1213 (1445)
Q Consensus 1138 ~~~~~~~-v~~~~~~---~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~ 1213 (1445)
.++..+. .....+. ...+..++|.+...+.+.+.....+..+...+.++..+..|.+|+.+.++.+++..... .
T Consensus 296 ~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~~~~~--~ 373 (1466)
T PTZ00265 296 AFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRKPLVENND--D 373 (1466)
T ss_pred HHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCC--C
Confidence 1111110 0000110 00112344544433333333344455667788899999999999999998766532111 1
Q ss_pred CCCCCCCccEEEEEEEEEeCCC-CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE-CCeeCCCC
Q 000522 1214 SPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILV-DGLNIINT 1291 (1445)
Q Consensus 1214 ~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~I-DG~di~~i 1291 (1445)
....|..+.|+|+||+|+|+.. ..++|+|+||+|++||++||||+||||||||+++|.|+|+|++|+|.+ ||.|+.++
T Consensus 374 ~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g~~i~~~ 453 (1466)
T PTZ00265 374 GKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIINDSHNLKDI 453 (1466)
T ss_pred CccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCCcchhhC
Confidence 1112334589999999999753 247999999999999999999999999999999999999999999999 67999999
Q ss_pred ChHhhhcceEEEcCCCcccCccHHHhcCCCC-------------------------------------------------
Q 000522 1292 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH------------------------------------------------- 1322 (1445)
Q Consensus 1292 ~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~------------------------------------------------- 1322 (1445)
+.+++|++|++|||+|.+|++||+|||.++.
T Consensus 454 ~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (1466)
T PTZ00265 454 NLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSNTTDSNE 533 (1466)
T ss_pred CHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhcccccchhh
Confidence 9999999999999999999999999997631
Q ss_pred ---------CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHH
Q 000522 1323 ---------MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQ 1391 (1445)
Q Consensus 1323 ---------~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~ 1391 (1445)
..+|++++++++.++++++++.+ |+||.+|++|.+||||||||++||||++++|+|||||||||+||++
T Consensus 534 ~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpTSaLD~~ 613 (1466)
T PTZ00265 534 LIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDEATSSLDNK 613 (1466)
T ss_pred hhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHH
Confidence 24678999999999999999998 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC--CCcEEEEeccChhHHhhcCEEEEEeCC
Q 000522 1392 TASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHG 1431 (1445)
Q Consensus 1392 te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G 1431 (1445)
+++.|++.|++.. +++|+|+||||++++..||+|+||++|
T Consensus 614 se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g 655 (1466)
T PTZ00265 614 SEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNR 655 (1466)
T ss_pred HHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCC
Confidence 9999999999875 489999999999999999999999996
No 47
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.8e-63 Score=635.60 Aligned_cols=532 Identities=19% Similarity=0.230 Sum_probs=416.0
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 272 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLD--GYVLAIALGLTSILKSFFDTQYSFHLSKLKLK 349 (1445)
Q Consensus 272 ~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~--g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ 349 (1445)
...+.+++.++...++.++..++..+.|+++..+++.+....+... ...+++++++..++..++.....+...+.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (592)
T PRK10790 16 AYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVG 95 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455667777888888899999999999999999997754222111 12223334445556667777777888899999
Q ss_pred HHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHH---HhhHhHHHHHHHH
Q 000522 350 LRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYL---LYTQVKFAFVSGL 425 (1445)
Q Consensus 350 ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~p~~i~i~~~l---L~~~lg~a~l~~~ 425 (1445)
+...+...+|+|.++.+.....+.+.|+++|.++.|++.+.+.... +..+....+.+++.+.+ +.+.+++..++++
T Consensus 96 ~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~ 175 (592)
T PRK10790 96 VVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIF 175 (592)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998888889999999999999999875543 33333333333332222 2233333333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000522 426 AITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC- 504 (1445)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~- 504 (1445)
++.+.+..+..++..+..++..+..++..+...|.++|+++||.|+.|+.+.+++.+..++..+...+.....+..
T Consensus 176 ---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (592)
T PRK10790 176 ---PAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLL 252 (592)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223344555666677777777888888899999999999999999999999888876654444333322222211
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchh
Q 000522 505 ---VFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 581 (1445)
Q Consensus 505 ---~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~ 581 (1445)
..+......+..++.+ .+ +..+.++.+.+++++.++..+..|+..+...+..+.++..+.+||.++++.++.++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~-~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 330 (592)
T PRK10790 253 RPLLSLFSALILCGLLMLF-GF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG 330 (592)
T ss_pred HHHHHHHHHHHHHHHHHHH-HH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC
Confidence 1111111111112222 23 356789999999999999999999999999999999999999999999975432111
Q ss_pred hhhhcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCc
Q 000522 582 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 661 (1445)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~ 661 (1445)
.. .. ......++++|++|+|+++ +++|+|+||++++||.++|+|+||||||||+++|+|++
T Consensus 331 ~~---~~-----------~~~~~~i~~~~v~f~y~~~-----~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~ 391 (592)
T PRK10790 331 ND---DR-----------PLQSGRIDIDNVSFAYRDD-----NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYY 391 (592)
T ss_pred CC---cc-----------CCCCCeEEEEEEEEEeCCC-----CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhccc
Confidence 00 00 1123469999999999632 23599999999999999999999999999999999999
Q ss_pred cCCCeEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCccccc
Q 000522 662 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIG 728 (1445)
Q Consensus 662 ~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg 728 (1445)
+|++|+|.++| .|+||||+|++|++||||||.+|.+.++++..+++++++++++++.+|+|.+|.+|
T Consensus 392 ~p~~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~ 471 (592)
T PRK10790 392 PLTEGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLG 471 (592)
T ss_pred CCCCceEEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhcccccccccc
Confidence 99999999987 49999999999999999999999888999999999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeC
Q 000522 729 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 808 (1445)
Q Consensus 729 ~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~ 808 (1445)
|+|.+||||||||++||||++++|+|++||||||+||++++++|.+. +.. +.+++|+|+||||++.++.||+|++|++
T Consensus 472 e~g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~-l~~-~~~~~tvIivtHr~~~l~~~D~ii~l~~ 549 (592)
T PRK10790 472 EQGNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQA-LAA-VREHTTLVVIAHRLSTIVEADTILVLHR 549 (592)
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999887 433 4567999999999999999999999999
Q ss_pred CEEEEecCHhHHHhccccCcc
Q 000522 809 GQVKWIGSSADLAVSLYSGFW 829 (1445)
Q Consensus 809 G~i~~~g~~~~~~~~~~~~~~ 829 (1445)
|++++.|+++|+++..+.+..
T Consensus 550 G~i~~~G~~~~L~~~~~~y~~ 570 (592)
T PRK10790 550 GQAVEQGTHQQLLAAQGRYWQ 570 (592)
T ss_pred CEEEEEcCHHHHHhCCCHHHH
Confidence 999999999999876655444
No 48
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2.3e-63 Score=634.00 Aligned_cols=539 Identities=18% Similarity=0.216 Sum_probs=425.3
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1445)
Q Consensus 269 l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~ 348 (1445)
.++.+++.+++.++...++.++..++.++.|++++.+++.+-.+.+......+++.++++.++..++...+.+...+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (576)
T TIGR02204 8 ALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTWLGE 87 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455566777788888889999999999999999999974322222222223333444445555566667788889999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH-HH--hhHhHHHHHHH
Q 000522 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY-LL--YTQVKFAFVSG 424 (1445)
Q Consensus 349 ~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~-lL--~~~lg~a~l~~ 424 (1445)
++...+...+|+|.++.+.....+.+.|++.+.++.|++.+.+... .+..++...+.+++++. ++ .+.+++.++++
T Consensus 88 ~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~ 167 (576)
T TIGR02204 88 RVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLA 167 (576)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9999999999999999998887888899999999999999987653 34444444444333332 22 23333333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 425 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 504 (1445)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 504 (1445)
+++.+.+..++.+++++..+++++..++..+...|.++|+++||.+++|+.+.+++++..++..+...+......+.
T Consensus 168 ---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (576)
T TIGR02204 168 ---VPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALL 244 (576)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233344567888888899999999999999999999999999999999988888887665555544443333332
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhh
Q 000522 505 VFFWATT--PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHEL 582 (1445)
Q Consensus 505 ~~~~~~~--~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~ 582 (1445)
..+.... ...+..+.+|.|.+..+.++++.++++..+...+..|+..++..+..+.+++.+++|+.++++.++..+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 245 TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 2222111 22334556778888888999999999999999999999999999999999999999999999765321100
Q ss_pred hhhcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCcc
Q 000522 583 EQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM 662 (1445)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~ 662 (1445)
... .... .+....++++|++|+|+.+++ +++|+|+||+++|||.++|+|+||||||||+++|+|+++
T Consensus 325 ~~~-~~~~---------~~~~~~i~~~~v~f~y~~~~~---~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~ 391 (576)
T TIGR02204 325 AHP-KTLP---------VPLRGEIEFEQVNFAYPARPD---QPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYD 391 (576)
T ss_pred CCC-ccCC---------cCCCceEEEEEEEEECCCCCC---CccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccC
Confidence 000 0000 012346999999999975322 345999999999999999999999999999999999999
Q ss_pred CCCeEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCccccc
Q 000522 663 LTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIG 728 (1445)
Q Consensus 663 ~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg 728 (1445)
|.+|+|.++| .|+||||+|++|++||||||.+|.+ .++++..++++.+++.++++.+|+|++|.+|
T Consensus 392 p~~G~I~i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~ 471 (576)
T TIGR02204 392 PQSGRILLDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLG 471 (576)
T ss_pred CCCCEEEECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeC
Confidence 9999999987 5999999999999999999999875 5778899999999999999999999999999
Q ss_pred CCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeC
Q 000522 729 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDK 808 (1445)
Q Consensus 729 ~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~ 808 (1445)
|+|.+||||||||++||||++++|++++||||||+||+++++.+++. +.. +.+++|+|+|||+.+.++.+|+|++|++
T Consensus 472 ~~g~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~-l~~-~~~~~t~IiitH~~~~~~~~d~vi~l~~ 549 (576)
T TIGR02204 472 ERGVTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQA-LET-LMKGRTTLIIAHRLATVLKADRIVVMDQ 549 (576)
T ss_pred CCCCcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHH-HHH-HhCCCEEEEEecchHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999988876 443 4568999999999999999999999999
Q ss_pred CEEEEecCHhHHHhccc
Q 000522 809 GQVKWIGSSADLAVSLY 825 (1445)
Q Consensus 809 G~i~~~g~~~~~~~~~~ 825 (1445)
|++++.|+++++.++.+
T Consensus 550 g~~~~~g~~~~l~~~~~ 566 (576)
T TIGR02204 550 GRIVAQGTHAELIAKGG 566 (576)
T ss_pred CEEEeeecHHHHHHcCC
Confidence 99999999999876543
No 49
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.8e-63 Score=627.76 Aligned_cols=505 Identities=19% Similarity=0.189 Sum_probs=392.2
Q ss_pred HHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 272 AICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 351 (1445)
Q Consensus 272 ~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir 351 (1445)
.+.+.+++.++...++.++..++..+.|++++.++|.+.........+.+.++++++.++..++.....+...+.+.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (529)
T TIGR02868 6 PLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALRSL 85 (529)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455677777788888899999999999999999876542221111111222223445566666666677788899999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHH---HHhhHhHHHHHHHHHH
Q 000522 352 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALY---LLYTQVKFAFVSGLAI 427 (1445)
Q Consensus 352 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~p~~i~i~~~---lL~~~lg~a~l~~~~~ 427 (1445)
..+...+|+|.++++...+.+.++|+++|.++.|++++.+.... +..+....+.+++++. .+.+.+++.+++++++
T Consensus 86 ~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~~~ 165 (529)
T TIGR02868 86 GRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGLLL 165 (529)
T ss_pred HHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999888899999999999999999886543 4444444444333333 3334444444333222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 428 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFF 507 (1445)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~ 507 (1445)
+.++ ...+..+..++..++..+..++..+...|.++|+++||.+++|+.+.+++++..++..+...+.....+....+
T Consensus 166 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (529)
T TIGR02868 166 AGFV--APLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAA 243 (529)
T ss_pred HHHH--HHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 12233343455567777888999999999999999999999999999999887766656555555544444333
Q ss_pred HHHHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhh
Q 000522 508 WATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQA 585 (1445)
Q Consensus 508 ~~~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~ 585 (1445)
..... ..+.++++|.|.+.++.++++.+.+.+.+...+..|+..++..+..+.++.++.+|+.++++.++..+....
T Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~- 322 (529)
T TIGR02868 244 QLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVV- 322 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCC-
Confidence 32222 223345677787888899999999999999999999999999999999999999999999976543211000
Q ss_pred cCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCC
Q 000522 586 ANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH 665 (1445)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~ 665 (1445)
..+. ........|+++|++|+|+++ + ++|+|+||++++||+++|+||||||||||+++|+|+++|++
T Consensus 323 -~~~~-------~~~~~~~~I~~~~vsf~Y~~~--~---~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~ 389 (529)
T TIGR02868 323 -PAAG-------ALGLGKPTLELRDLSFGYPGS--P---PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQ 389 (529)
T ss_pred -CCCc-------ccCCCCceEEEEEEEEecCCC--C---ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCC
Confidence 0000 001123469999999999642 2 35999999999999999999999999999999999999999
Q ss_pred eEEEEcC------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000522 666 GSIHASG------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1445)
Q Consensus 666 G~i~~~~------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~ 732 (1445)
|+|.++| +||||||+|++|++||||||.+|.+ .++++++++++.|+++++++.+|+|++|.+||+|.
T Consensus 390 G~I~i~g~~i~~~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~ 469 (529)
T TIGR02868 390 GEVTLDGVSVSSLQDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGA 469 (529)
T ss_pred cEEEECCEEhhhHHHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccC
Confidence 9999998 7999999999999999999999864 68899999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCc
Q 000522 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNV 794 (1445)
Q Consensus 733 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~ 794 (1445)
+||||||||++||||++++|+|++||||||+||+++++.|.+.+ .. ..+++|+|+||||+
T Consensus 470 ~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l-~~-~~~~~TvIiItHrl 529 (529)
T TIGR02868 470 RLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDL-LA-ALSGKTVVVITHHL 529 (529)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HH-hcCCCEEEEEecCC
Confidence 99999999999999999999999999999999999999999884 33 56789999999985
No 50
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-66 Score=581.83 Aligned_cols=475 Identities=25% Similarity=0.379 Sum_probs=383.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhH-HHHHHH
Q 000522 962 SFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVL-SYVQVF 1040 (1445)
Q Consensus 962 ~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~-~~~~~~ 1040 (1445)
++...+..+-+.+--+.|.++.+..+.|.-+..+|-+..-......-|+..+-..+...+..++-+....+++ ....||
T Consensus 5 ~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~ 84 (497)
T COG5265 5 LFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWW 84 (497)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccH
Confidence 4455566666777778888999999999888777755444433333333333333333333333332222222 223566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 1041 FLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELT 1120 (1445)
Q Consensus 1041 ~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~ 1120 (1445)
++++.+...++|.++.-.-....-..||.-..+.+..++.-.+++-+-.|+|.||.|+++..+|.+.++.++++..+...
T Consensus 85 f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~ 164 (497)
T COG5265 85 FALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHV 164 (497)
T ss_pred HHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHH
Confidence 66665555555544333222233344555555666677788899999999999999999999999999999999888777
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000522 1121 ASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM 1200 (1445)
Q Consensus 1121 ~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~ 1200 (1445)
.-.|+.+.-..+..........+.... ...+..+.|.+...-.+..++..+++.+...+.++.++....|+..+..
T Consensus 165 Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~----v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl 240 (497)
T COG5265 165 SLLVLNFGQTAIFSTGLRVMMTMSALG----VEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLL 240 (497)
T ss_pred HHHHHHHhhHHHHHHHHHHHHhhcHHH----HhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhh
Confidence 777777665544443222222221111 1235567888888999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCCC-CCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCc
Q 000522 1201 DVPQEELCGYQSLSPDWP-FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1279 (1445)
Q Consensus 1201 ~~~~e~~~~~~~~~~~wp-~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G 1279 (1445)
+.+.|....+ ..++-|| ..|.|.|+||+|.|.+. .++|+|+||++++|+++||||+||+||||+..+|+|+|++++|
T Consensus 241 ~~~~~v~d~p-da~~L~~~~~g~v~F~~V~F~y~~~-r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG 318 (497)
T COG5265 241 DVEAEVSDAP-DAPPLWPVRLGAVAFINVSFAYDPR-RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG 318 (497)
T ss_pred ccchhhccCC-CCccccccccceEEEEEEEeecccc-chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc
Confidence 8877653322 2344574 46899999999999876 4799999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCC
Q 000522 1280 QILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGI 1356 (1445)
Q Consensus 1280 ~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~ 1356 (1445)
+|.|||+||.++..+.+|+.||+||||.+||+.|+..|+.++++ .+++|++.|++.++++++++++ |+||.|||+|-
T Consensus 319 ~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 319 SITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred eEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 99999999999999999999999999999999999999998765 6899999999999999999999 99999999999
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeee
Q 000522 1357 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHC 1436 (1445)
Q Consensus 1357 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~ 1436 (1445)
.||||||||+++||++|++|+||+||||||+||..||+.||..|++..+++|.++|||||+||.++|.|+||++|+|+|.
T Consensus 399 klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 399 KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCC
Q 000522 1437 GCAAAP 1442 (1445)
Q Consensus 1437 G~p~~~ 1442 (1445)
|+|+++
T Consensus 479 g~h~~l 484 (497)
T COG5265 479 GTHEEL 484 (497)
T ss_pred CcHHHH
Confidence 999876
No 51
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-65 Score=651.21 Aligned_cols=478 Identities=23% Similarity=0.316 Sum_probs=345.0
Q ss_pred CceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------
Q 000522 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1445)
Q Consensus 603 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 672 (1445)
+..++++|++++|..... ..++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 10 ~~~l~v~~l~~~y~~~~~--~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~ 87 (623)
T PRK10261 10 RDVLAVENLNIAFMQEQQ--KIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQV 87 (623)
T ss_pred CceEEEeceEEEecCCCC--ceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccc
Confidence 346899999999863211 12469999999999999999999999999999999999999999987643
Q ss_pred -----------------eEEEEcCCC--CCCC-ccHHHHHhcCCC----CCh----hhHHHHHHHhcchHHHhhccCCCc
Q 000522 673 -----------------SIAYVPQVP--WILS-GTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDM 724 (1445)
Q Consensus 673 -----------------~i~y~~Q~p--~l~~-~ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~d~~~~~~gd~ 724 (1445)
.||||+|+| .++. .||+|||.++.. .+. ++..++++..++... .
T Consensus 88 ~~~~~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~--------~ 159 (623)
T PRK10261 88 IELSEQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEA--------Q 159 (623)
T ss_pred cccccCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------h
Confidence 489999998 4554 599999987521 222 234455555555310 1
Q ss_pred ccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhhh-CCE
Q 000522 725 AYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADM 802 (1445)
Q Consensus 725 t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-~d~ 802 (1445)
........+|||||||||+||||++.+|++|||||||++||+.+.+.+.+. +.... ..|+|+|+|||+++.+.. ||+
T Consensus 160 ~~~~~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~l-l~~l~~~~g~tvi~itHdl~~~~~~adr 238 (623)
T PRK10261 160 TILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQL-IKVLQKEMSMGVIFITHDMGVVAEIADR 238 (623)
T ss_pred hHHhCCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCE
Confidence 123456679999999999999999999999999999999999999988875 33211 237899999999998765 999
Q ss_pred EEEEeCCEEEEecCHhHHHhccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcC
Q 000522 803 VVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEG 882 (1445)
Q Consensus 803 i~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g 882 (1445)
|++|++|++++.|+++++..... +
T Consensus 239 i~vl~~G~i~~~g~~~~~~~~~~-------------~------------------------------------------- 262 (623)
T PRK10261 239 VLVMYQGEAVETGSVEQIFHAPQ-------------H------------------------------------------- 262 (623)
T ss_pred EEEeeCCeecccCCHHHhhcCCC-------------C-------------------------------------------
Confidence 99999999998888776531100 0
Q ss_pred ccchhhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 883 RVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFS 962 (1445)
Q Consensus 883 ~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~ 962 (1445)
. |.+. + +. +..... ..
T Consensus 263 -----~---~~~~----------l---------------~~-~~~~~~----~~-------------------------- 278 (623)
T PRK10261 263 -----P---YTRA----------L---------------LA-AVPQLG----AM-------------------------- 278 (623)
T ss_pred -----h---hhhh----------h---------------hh-ccCccc----cc--------------------------
Confidence 0 0000 0 00 000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHH
Q 000522 963 FAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFL 1042 (1445)
Q Consensus 963 ~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~ 1042 (1445)
.|+ .++
T Consensus 279 --------------------------------~~~--------------~~~---------------------------- 284 (623)
T PRK10261 279 --------------------------------KGL--------------DYP---------------------------- 284 (623)
T ss_pred --------------------------------ccc--------------cCC----------------------------
Confidence 000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 1043 LLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTAS 1122 (1445)
Q Consensus 1043 ~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~ 1122 (1445)
.+-|.. +
T Consensus 285 ------------------------------~~~~~~----~--------------------------------------- 291 (623)
T PRK10261 285 ------------------------------RRFPLI----S--------------------------------------- 291 (623)
T ss_pred ------------------------------cccccc----c---------------------------------------
Confidence 000000 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 000522 1123 LWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV 1202 (1445)
Q Consensus 1123 ~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~ 1202 (1445)
.. . .. .. .
T Consensus 292 ---------------------~~---~-~~-~~----------------------------------------------~ 299 (623)
T PRK10261 292 ---------------------LE---H-PA-KQ----------------------------------------------E 299 (623)
T ss_pred ---------------------cc---c-cc-cc----------------------------------------------C
Confidence 00 0 00 00 0
Q ss_pred CccccccCCCCCCCCCCCccEEEEEEEEEeCCC---------CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcC
Q 000522 1203 PQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL 1273 (1445)
Q Consensus 1203 ~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl 1273 (1445)
+.+. . ...+ +....++++|++++|+.. ...+|+||||+|++||++||+|+||||||||+++|.|+
T Consensus 300 ~~~~--~-~~~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl 373 (623)
T PRK10261 300 PPIE--Q-DTVV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRL 373 (623)
T ss_pred cccc--c-cccc---CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcC
Confidence 0000 0 0000 012259999999999621 13699999999999999999999999999999999999
Q ss_pred CCCCCcEEEECCeeCCCCChH---hhhcceEEEcCCCc--ccCc-cHHHhcCCC----CCCChHHHHHHHHHccHHHHHH
Q 000522 1274 TPICGGQILVDGLNIINTPVR---DLRGRFAVVPQSPF--LFEG-SLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVE 1343 (1445)
Q Consensus 1274 ~~~~~G~I~IDG~di~~i~~~---~lR~~i~~VpQdp~--lF~g-TIReNLdp~----~~~sd~ei~~aL~~~~l~~~i~ 1343 (1445)
++|++|+|.+||.++...+.. .+|++|+||||+|. +++. |+++|+... +....++.. ....+.++
T Consensus 374 ~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~L~ 448 (623)
T PRK10261 374 VESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAA-----ARVAWLLE 448 (623)
T ss_pred CCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHH-----HHHHHHHH
Confidence 999999999999999877643 45788999999983 6654 999998531 111111111 11223334
Q ss_pred hCCCc-hhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHh
Q 000522 1344 AVGLE-TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL 1420 (1445)
Q Consensus 1344 ~lgLd-t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~ 1420 (1445)
.+|++ .........||||||||++|||||+.+|+|||||||||+||..+.+.|.+.|++.. .+.|||+|||+++.+.
T Consensus 449 ~~gL~~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~ 528 (623)
T PRK10261 449 RVGLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVE 528 (623)
T ss_pred HcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHH
Confidence 44664 33455566899999999999999999999999999999999999999999998764 3789999999999987
Q ss_pred h-cCEEEEEeCCeEeeecCCCC
Q 000522 1421 N-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1421 ~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
. ||||++|++|+|+|.|++++
T Consensus 529 ~~~dri~vl~~G~iv~~g~~~~ 550 (623)
T PRK10261 529 RISHRVAVMYLGQIVEIGPRRA 550 (623)
T ss_pred HhCCEEEEEECCEEEEecCHHH
Confidence 6 89999999999999998765
No 52
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.1e-62 Score=637.89 Aligned_cols=542 Identities=19% Similarity=0.212 Sum_probs=438.7
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1445)
Q Consensus 269 l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~ 348 (1445)
.+...++.+++.+...++..++..++.++.|++++.++|.+-...+....+.++++++++.++..++.....+...+++.
T Consensus 129 ~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 208 (694)
T TIGR01846 129 WFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAHLTS 208 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666777888888999999999999999999999987643333444555666666777788888888889999999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHH
Q 000522 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 427 (1445)
Q Consensus 349 ~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~ 427 (1445)
++...+...+|+|.++++...+.+.+.|++.+.+ .|++.+.+... .+..+....+.+++.+.+++..-++.+++.+++
T Consensus 209 ~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~ 287 (694)
T TIGR01846 209 RIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVIGS 287 (694)
T ss_pred HHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999998889999999998 59999988653 333333222222222333333223333333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 428 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFF 507 (1445)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~ 507 (1445)
+++.+.+..++.+++++..++.++..+++.+.+.|.++|+++||.+|.|+.+.+++.+.-++..+...+..........+
T Consensus 288 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (694)
T TIGR01846 288 LVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAGQA 367 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556677778888888888999999999999999999999999999999998887666666555555444443333
Q ss_pred HHHHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhh
Q 000522 508 WATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQA 585 (1445)
Q Consensus 508 ~~~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~ 585 (1445)
..... ..+.++++|+|.+..+.+|.|.++++..+...+..|+..+...+..+.+++.+++|+.++++.++..+.. .
T Consensus 368 ~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~-~- 445 (694)
T TIGR01846 368 IELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA-G- 445 (694)
T ss_pred HHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC-C-
Confidence 22222 2234567888888888999999999999999999999999999999999999999999999765432110 0
Q ss_pred cCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCC
Q 000522 586 ANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH 665 (1445)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~ 665 (1445)
... ....+..++++|++|+|+++. +++|+|+||++++||.++|+|+||||||||+++|+|+++|++
T Consensus 446 --~~~--------~~~~~~~i~~~~vsf~y~~~~----~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~ 511 (694)
T TIGR01846 446 --LAA--------LPELRGAITFENIRFRYAPDS----PEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQH 511 (694)
T ss_pred --CCC--------CCCCCCeEEEEEEEEEcCCCC----ccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCC
Confidence 000 012235799999999997432 235999999999999999999999999999999999999999
Q ss_pred eEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCC
Q 000522 666 GSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKG 731 (1445)
Q Consensus 666 G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g 731 (1445)
|+|.++| .|+||+|+|++|++||+|||.++.+ .++++..++++.++++++++.+|+|.+|.+|++|
T Consensus 512 G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g 591 (694)
T TIGR01846 512 GQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKG 591 (694)
T ss_pred ceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCC
Confidence 9999987 4899999999999999999999764 6788899999999999999999999999999999
Q ss_pred CccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEE
Q 000522 732 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQV 811 (1445)
Q Consensus 732 ~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i 811 (1445)
.+||||||||++||||++++|+|++||||||+||+++++.+.+. +.. ..+++|+|++||+++.++.||+|++|++|++
T Consensus 592 ~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~-~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i 669 (694)
T TIGR01846 592 ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRN-MRE-ICRGRTVIIIAHRLSTVRACDRIIVLEKGQI 669 (694)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHH-HHH-HhCCCEEEEEeCChHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999987 333 4568999999999999999999999999999
Q ss_pred EEecCHhHHHhccccCcc
Q 000522 812 KWIGSSADLAVSLYSGFW 829 (1445)
Q Consensus 812 ~~~g~~~~~~~~~~~~~~ 829 (1445)
+++|+++++++..+.+.+
T Consensus 670 ~~~g~~~~l~~~~~~y~~ 687 (694)
T TIGR01846 670 AESGRHEELLALQGLYAR 687 (694)
T ss_pred EEeCCHHHHHHcCChHHH
Confidence 999999999876554433
No 53
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=3e-63 Score=626.26 Aligned_cols=510 Identities=16% Similarity=0.148 Sum_probs=382.3
Q ss_pred HHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 000522 907 SAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAP 986 (1445)
Q Consensus 907 ~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p 986 (1445)
+.++...+....++.++.+.+.... ... ..+..++++.++..++.++..+.....+.+...+++.++++++++.|
T Consensus 26 ~~~~~~~~~~~~~~~i~~~i~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lR~~l~~~l~~~~ 100 (555)
T TIGR01194 26 LGLAGGLAIIALLASINNAIHEENF--LGQ---GSLFSFGGLCLLALLFRIGADIFPAYAGMHIIANLRIALCEKILGAP 100 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCc--ccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3444444555555666666542110 000 11222334445556667777778888899999999999999999999
Q ss_pred ccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 987 VLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSREL 1066 (1445)
Q Consensus 987 ~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l 1066 (1445)
+.||++.++|++++|+++|++.+++.+.. +..++..++.+++.++++++.+|.+.++++.++.+...+..+..+..++.
T Consensus 101 ~~~~~~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~li~l~~~~~~~~~~~~~~~~~~~~ 179 (555)
T TIGR01194 101 IEEIDRRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPMFAITISAIIIGTAAQLLAFMGGFKF 179 (555)
T ss_pred HHHHHhcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987753 55666666666677777777777665554433333223222222222233
Q ss_pred HHHHHhhcchhHhHHHHhhccHHHHHhcCcHH--HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000522 1067 RRLDSVSRSPIYASFTETLNGSSTIRAFKSED--YFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA 1144 (1445)
Q Consensus 1067 ~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~--~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~ 1144 (1445)
.+......+.+.+.+.|.+.|+++||+|+.++ ...+++.+..++..+................+++..+.+ ++..
T Consensus 180 ~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 256 (555)
T TIGR01194 180 FHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAENFGQLLFFLLI---GCAL 256 (555)
T ss_pred HHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH
Confidence 33333455678899999999999999999954 556677776666665554332222221111122211111 1111
Q ss_pred HHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccc-cc---cC-CCC--CCCC
Q 000522 1145 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEE-LC---GY-QSL--SPDW 1217 (1445)
Q Consensus 1145 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~-~~---~~-~~~--~~~w 1217 (1445)
+.+.. .+..+.|.+...+.+...+..++..+...+.++++...|.+|+.++.+.+.++ .. .. ... .+..
T Consensus 257 ~~~~~----~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~ 332 (555)
T TIGR01194 257 FAAAM----FASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPELELSDADNVLLLAHD 332 (555)
T ss_pred HHHHH----hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccC
Confidence 11110 12356788888888888999999999999999999999999999997632221 10 00 000 0111
Q ss_pred CCCccEEEEEEEEEeCCC---CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChH
Q 000522 1218 PFQGLIEFQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1294 (1445)
Q Consensus 1218 p~~g~I~f~nVs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~ 1294 (1445)
...+.|+|+||+|+|++. .+++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||+|+.+++.+
T Consensus 333 ~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~i~~~g~~i~~~~~~ 412 (555)
T TIGR01194 333 KSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGEILLDGAAVSADSRD 412 (555)
T ss_pred CCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHH
Confidence 234689999999999753 23699999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcceEEEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
++|+++++|||||++|++|+|+|+.+ ..+|++++++++.++++++++.+ |+||. .+||||||||++||||+
T Consensus 413 ~~~~~i~~v~q~~~lf~~ti~~n~~~--~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~LSgGq~qRlalaRal 485 (555)
T TIGR01194 413 DYRDLFSAIFADFHLFDDLIGPDEGE--HASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TALSTGQQKRLALICAW 485 (555)
T ss_pred HHHhhCcEEccChhhhhhhhhccccc--chhHHHHHHHHHHcCCchhhcccccccCCc-----ccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999743 46789999999999999999988 99984 58999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHH-h-CCCcEEEEeccChhHHhhcCEEEEEeCCeEeee
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISS-E-CKGMTVITIAHRISTVLNMDEILILDHGHLPHC 1436 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~-~-~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~ 1436 (1445)
+++|+|||||||||+||++|++.+++.+.+ . .+++|+|+||||++++..||+|+||++|+++|.
T Consensus 486 l~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 486 LEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred HcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999887643 3 468999999999999999999999999999985
No 54
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3.8e-64 Score=682.83 Aligned_cols=248 Identities=21% Similarity=0.294 Sum_probs=198.3
Q ss_pred HHHHHHHHHHHHHHHHhh--cCCccccccC--CCCCCCCCCCc--cEEEEEEEEEeC--CCCCccceeeeEEEeCCcEEE
Q 000522 1183 FTETEKEMVSLERVLEYM--DVPQEELCGY--QSLSPDWPFQG--LIEFQNVTMRYK--PSLPAALHDINFTIEGGTQVG 1254 (1445)
Q Consensus 1183 ~~~~e~~~~sv~Ri~~~~--~~~~e~~~~~--~~~~~~wp~~g--~I~f~nVs~~Y~--~~~~~vL~~isl~I~~Gekvg 1254 (1445)
..+.|..+.++||..++. +.++|..... ..++. ..| .++++||+++|+ ++.+++|+|||++|+|||++|
T Consensus 717 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~a 793 (1394)
T TIGR00956 717 GETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEK---ESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTA 793 (1394)
T ss_pred ccccccccccccccccCCCCccccccccccccccccc---cCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEE
Confidence 345677778899988763 2333321111 11111 134 479999999995 334579999999999999999
Q ss_pred EECCCCCCHHHHHHHHhcCCC---CCCcEEEECCeeCCCCChHhhhcceEEEcCCCccc-CccHHHhcCCC------CCC
Q 000522 1255 IVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF-EGSLRDNLDPF------HMN 1324 (1445)
Q Consensus 1255 IvGrTGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF-~gTIReNLdp~------~~~ 1324 (1445)
|+||||||||||+++|.|+.+ |++|+|.+||.++. ..+|++++||||++.++ ..||||||++. ...
T Consensus 794 I~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~ 869 (1394)
T TIGR00956 794 LMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSV 869 (1394)
T ss_pred EECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCC
Confidence 999999999999999999998 78899999999985 35789999999997654 56999999742 122
Q ss_pred ChHH----HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC-EEEEeccccCCCHHHHHHHHHH
Q 000522 1325 DDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK-VLCLDECTANVDAQTASILQNA 1399 (1445)
Q Consensus 1325 sd~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~-ILlLDEaTS~lD~~te~~Iq~~ 1399 (1445)
++++ +.++++..++.+ -.|+.+++.|.+||||||||++|||||+++|+ ||+||||||+||..+...|++.
T Consensus 870 ~~~~~~~~v~~~l~~l~L~~-----~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~ 944 (1394)
T TIGR00956 870 SKSEKMEYVEEVIKLLEMES-----YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKL 944 (1394)
T ss_pred CHHHHHHHHHHHHHHcCChh-----hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHH
Confidence 3333 445566665544 25888888888999999999999999999997 9999999999999999999999
Q ss_pred HHHh-CCCcEEEEeccChhHH--hhcCEEEEEeCC-eEeeecCCCCC
Q 000522 1400 ISSE-CKGMTVITIAHRISTV--LNMDEILILDHG-HLPHCGCAAAP 1442 (1445)
Q Consensus 1400 I~~~-~~~~TvI~IaHrl~ti--~~~DrI~Vl~~G-~vvE~G~p~~~ 1442 (1445)
|++. .+|+|||+++|+++.. ..||+|++|++| +++++|++.+.
T Consensus 945 L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~~ 991 (1394)
T TIGR00956 945 MRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGEN 991 (1394)
T ss_pred HHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcccc
Confidence 9886 4689999999999974 569999999997 99999998653
No 55
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-65 Score=635.68 Aligned_cols=442 Identities=23% Similarity=0.324 Sum_probs=337.6
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccC--CCeEEEEcC----------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML--THGSIHASG---------- 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~--~~G~i~~~~---------- 672 (1445)
.++++|+++.|.. . ++|+|+||++++|++++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~nl~~~~~~---~---~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~ 78 (506)
T PRK13549 5 LLEMKNITKTFGG---V---KALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRD 78 (506)
T ss_pred eEEEeeeEEEeCC---e---EeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHH
Confidence 5889999999852 2 359999999999999999999999999999999999986 899999875
Q ss_pred ----eEEEEcCCCCCCCc-cHHHHHhcCCCC------Chh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchH
Q 000522 673 ----SIAYVPQVPWILSG-TIRDNILFGKNY------DPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1445)
Q Consensus 673 ----~i~y~~Q~p~l~~~-ti~~nI~~g~~~------~~~----~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGG 737 (1445)
.++||+|+|.++.. |++||+.++... +.+ +.+++++..++.. .......+||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgG 147 (506)
T PRK13549 79 TERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDI-----------NPATPVGNLGLG 147 (506)
T ss_pred HHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCC-----------CcccchhhCCHH
Confidence 38999999988765 999999986431 211 2233344433321 223456789999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecC
Q 000522 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 816 (1445)
Q Consensus 738 QkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~ 816 (1445)
||||++||||+..+|+++||||||++||+...+.+++. +.....+++|+|++||+++.+.. ||+|++|++|+++..|+
T Consensus 148 qkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 226 (506)
T PRK13549 148 QQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDI-IRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRP 226 (506)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecc
Confidence 99999999999999999999999999999999988875 33212357899999999999875 99999999999987665
Q ss_pred HhHHHhccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcCccchhhHHHHHhhh
Q 000522 817 SADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFS 896 (1445)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~ 896 (1445)
.+++.. .+.
T Consensus 227 ~~~~~~-----------------------------------------------------~~~------------------ 235 (506)
T PRK13549 227 AAGMTE-----------------------------------------------------DDI------------------ 235 (506)
T ss_pred cccCCH-----------------------------------------------------HHH------------------
Confidence 322100 000
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 897 GWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHN 976 (1445)
Q Consensus 897 g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~ 976 (1445)
+..+..
T Consensus 236 -------------------------~~~~~~------------------------------------------------- 241 (506)
T PRK13549 236 -------------------------ITMMVG------------------------------------------------- 241 (506)
T ss_pred -------------------------HHHhhC-------------------------------------------------
Confidence 000000
Q ss_pred HHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 977 TLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQ 1056 (1445)
Q Consensus 977 ~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~ 1056 (1445)
T Consensus 242 -------------------------------------------------------------------------------- 241 (506)
T PRK13549 242 -------------------------------------------------------------------------------- 241 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 000522 1057 FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFI 1136 (1445)
Q Consensus 1057 ~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~ 1136 (1445)
+
T Consensus 242 -----------------~-------------------------------------------------------------- 242 (506)
T PRK13549 242 -----------------R-------------------------------------------------------------- 242 (506)
T ss_pred -----------------c--------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCC
Q 000522 1137 ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPD 1216 (1445)
Q Consensus 1137 ~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~ 1216 (1445)
. .. . . .+.+. ++
T Consensus 243 --------------~--~~---~---------------------------------------~--~~~~~------~~-- 254 (506)
T PRK13549 243 --------------E--LT---A---------------------------------------L--YPREP------HT-- 254 (506)
T ss_pred --------------C--cc---c---------------------------------------c--ccccc------cC--
Confidence 0 00 0 0 00000 00
Q ss_pred CCCCccEEEEEEEEEeCC-CCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-CCCcEEEECCeeCCCCCh-
Q 000522 1217 WPFQGLIEFQNVTMRYKP-SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-ICGGQILVDGLNIINTPV- 1293 (1445)
Q Consensus 1217 wp~~g~I~f~nVs~~Y~~-~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-~~~G~I~IDG~di~~i~~- 1293 (1445)
+....|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.|+...+.
T Consensus 255 -~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~~~~~~~~ 333 (506)
T PRK13549 255 -IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKPVKIRNPQ 333 (506)
T ss_pred -CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEECCCCCHH
Confidence 01125899999999953 23469999999999999999999999999999999999999 599999999999865543
Q ss_pred HhhhcceEEEcCCC---cccC-ccHHHhcCCCC--CC------ChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCCh
Q 000522 1294 RDLRGRFAVVPQSP---FLFE-GSLRDNLDPFH--MN------DDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSV 1360 (1445)
Q Consensus 1294 ~~lR~~i~~VpQdp---~lF~-gTIReNLdp~~--~~------sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSg 1360 (1445)
+..|++++|+||+| .+|+ -|+.+|+.... .. +.++ .+....+.++.+|++. ........|||
T Consensus 334 ~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~~LSg 408 (506)
T PRK13549 334 QAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAA-----ELKTILESIQRLKVKTASPELAIARLSG 408 (506)
T ss_pred HHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHH-----HHHHHHHHHHhcCccCCCcccccccCCH
Confidence 45677899999997 3665 59999996421 11 1111 1112334445556642 34555668999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecC
Q 000522 1361 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGC 1438 (1445)
Q Consensus 1361 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~ 1438 (1445)
|||||++||||++++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||||++|++|+++..|+
T Consensus 409 G~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~~G~i~~~~~ 488 (506)
T PRK13549 409 GNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMHEGKLKGDLI 488 (506)
T ss_pred HHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999999999998753 48999999999999876 89999999999999998
Q ss_pred CCCC
Q 000522 1439 AAAP 1442 (1445)
Q Consensus 1439 p~~~ 1442 (1445)
+++.
T Consensus 489 ~~~~ 492 (506)
T PRK13549 489 NHNL 492 (506)
T ss_pred cccC
Confidence 8775
No 56
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.8e-62 Score=619.73 Aligned_cols=534 Identities=19% Similarity=0.208 Sum_probs=417.0
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCC---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 273 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSG---HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKL 348 (1445)
Q Consensus 273 l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~-~~~~---~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~ 348 (1445)
+++.+++.++..+++.++..++..+.|.+++.+++... .+.. .......+++++++.++..++.....+...+.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (574)
T PRK11160 10 LYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSHDATF 89 (574)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777888888999999999999999999998642 2211 0111112333444556677777777788889999
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHH---HHHhhHhHHHHHHH
Q 000522 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVAL---YLLYTQVKFAFVSG 424 (1445)
Q Consensus 349 ~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~---~lL~~~lg~a~l~~ 424 (1445)
++...+...+|+|.++++.....+.+.|++++.++.|++.+..+.. .+..+....+.+++++ +.+.+.+++..+++
T Consensus 90 ~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~~ 169 (574)
T PRK11160 90 RVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGGI 169 (574)
T ss_pred HHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988888999999999999999998654 3444444444443333 33334444433333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 425 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 504 (1445)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 504 (1445)
+++. ...+..++.++.++..++..+..++..+.+.|.++|+++||.||.|+.+.+++++..++-.+...+.....+..
T Consensus 170 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (574)
T PRK11160 170 LLLL--LLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLS 247 (574)
T ss_pred HHHH--HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222 22233556677778888888999999999999999999999999999998888877655444444444443333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchh
Q 000522 505 VFFWATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSL-ISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHE 581 (1445)
Q Consensus 505 ~~~~~~~~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l-~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~ 581 (1445)
..+..... ..+.++.+|.+. .++.++++..++++.+..++ ..|+..++..+..+.++..+.+||.++++.++..+.
T Consensus 248 ~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~ 326 (574)
T PRK11160 248 QALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTF 326 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 22222111 222345566666 46778999888877665443 468888899999999999999999999976532110
Q ss_pred hhhhcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCc
Q 000522 582 LEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM 661 (1445)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~ 661 (1445)
... .+. ......++++|++|+|+++. +++|+|+||++++||.++|+||||||||||+++|+|++
T Consensus 327 ~~~---~~~---------~~~~~~i~~~~v~f~y~~~~----~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~ 390 (574)
T PRK11160 327 PTT---STA---------AADQVSLTLNNVSFTYPDQP----QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAW 390 (574)
T ss_pred Ccc---cCC---------CCCCCeEEEEEEEEECCCCC----CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 000 000 11235699999999996421 24599999999999999999999999999999999999
Q ss_pred cCCCeEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccc
Q 000522 662 MLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYI 727 (1445)
Q Consensus 662 ~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~v 727 (1445)
+|++|+|.++| .|+||||+|++|++||+|||.++.+ .++++..++++.++++++++. |+|++|.+
T Consensus 391 ~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~v 469 (574)
T PRK11160 391 DPQQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWL 469 (574)
T ss_pred CCCCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchh
Confidence 99999999987 4999999999999999999999875 678899999999999999999 99999999
Q ss_pred cCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEe
Q 000522 728 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMD 807 (1445)
Q Consensus 728 g~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~ 807 (1445)
||+|.+||||||||++||||++++|++++||||||+||+++++++.+. +.. ..+++|+|++|||++.++.||+|++|+
T Consensus 470 ge~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~-l~~-~~~~~tviiitHr~~~~~~~d~i~~l~ 547 (574)
T PRK11160 470 GEGGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILEL-LAE-HAQNKTVLMITHRLTGLEQFDRICVMD 547 (574)
T ss_pred cCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecChhHHHhCCEEEEEe
Confidence 999999999999999999999999999999999999999999999887 433 456899999999999999999999999
Q ss_pred CCEEEEecCHhHHHhccccCc
Q 000522 808 KGQVKWIGSSADLAVSLYSGF 828 (1445)
Q Consensus 808 ~G~i~~~g~~~~~~~~~~~~~ 828 (1445)
+|++++.|+++|++++++.+.
T Consensus 548 ~G~i~~~g~~~~l~~~~g~y~ 568 (574)
T PRK11160 548 NGQIIEQGTHQELLAQQGRYY 568 (574)
T ss_pred CCeEEEeCCHHHHHhcCcHHH
Confidence 999999999999987765443
No 57
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.7e-62 Score=617.73 Aligned_cols=520 Identities=19% Similarity=0.226 Sum_probs=415.6
Q ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 276 AYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIM 355 (1445)
Q Consensus 276 ~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~ 355 (1445)
.+++.++..+++.++..++..+.|++++.++|.+....+....+.+++.++++.++..++.....+...+.+.++...+.
T Consensus 3 ~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 82 (544)
T TIGR01842 3 KNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALN 82 (544)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35667777888889999999999999999999765322223334455566667777888888888889999999999999
Q ss_pred HHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH--HHHHHHHHHHHHH--HHHHHhhHhHHHHHHHHHHHHHH
Q 000522 356 TIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS--FHDAWSLPFQIGV--ALYLLYTQVKFAFVSGLAITILL 431 (1445)
Q Consensus 356 ~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~--~~~~~~~p~~i~i--~~~lL~~~lg~a~l~~~~~~~~~ 431 (1445)
..+|+|.++++... .+...+.++.|++++.+.... +..+...++.++. .++.+.+.+++.+++++++ .
T Consensus 83 ~~~~~~ll~~~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l---~ 154 (544)
T TIGR01842 83 QPIFAASFSATLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLLVCFLLHPWIGILALGGAVV---L 154 (544)
T ss_pred HHHHHHHhcCcccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH---H
Confidence 99999999998732 245567788999999876542 3334444443333 2333444455444433332 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 432 IPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATT 511 (1445)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~ 511 (1445)
..+..+..++.++..++.++..+++.+.+.|.++|+++||.+|+|+.+.+++++..++..+...+.....+....+....
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445666777788888999999999999999999999999999999999988876665555544444433332222222
Q ss_pred H--HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcCCC
Q 000522 512 P--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSP 589 (1445)
Q Consensus 512 ~--~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~ 589 (1445)
. ..+.++++|.|.+.++.+|++.+++++.++..+..|+..+...+..+.+++.+.+|+.++++.++..+.. .+
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~-----~~ 309 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA-----MP 309 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC-----CC
Confidence 1 2234567888888889999999999999999999999999999999999999999999999765432110 00
Q ss_pred CcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEE
Q 000522 590 SYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIH 669 (1445)
Q Consensus 590 ~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~ 669 (1445)
. +..+..++++|++|+|+..+ +++|+|+||++++|+.++|+||||||||||+++|+|+++|++|+|.
T Consensus 310 ~---------~~~~~~i~~~~v~~~y~~~~----~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~ 376 (544)
T TIGR01842 310 L---------PEPEGHLSVENVTIVPPGGK----KPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVR 376 (544)
T ss_pred C---------CCCCCeEEEEEEEEEcCCCC----ccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEE
Confidence 0 11234699999999996421 2459999999999999999999999999999999999999999999
Q ss_pred EcC-------------eEEEEcCCCCCCCccHHHHHhcCC-CCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000522 670 ASG-------------SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1445)
Q Consensus 670 ~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LS 735 (1445)
++| .++||||+|++|++|++|||.++. +.+++++.++++.+++++.++.+|+|++|.+|++|.+||
T Consensus 377 ~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LS 456 (544)
T TIGR01842 377 LDGADLKQWDRETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLS 456 (544)
T ss_pred ECCEehhhCCHHHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCC
Confidence 986 499999999999999999998655 478888999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEec
Q 000522 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 736 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g 815 (1445)
||||||++||||++++|+++|||||||+||+++++.+.+. +.....+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 457 gGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~-l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g 535 (544)
T TIGR01842 457 GGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANA-IKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFG 535 (544)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHH-HHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeC
Confidence 9999999999999999999999999999999999999886 333123579999999999999899999999999999999
Q ss_pred CHhHHHh
Q 000522 816 SSADLAV 822 (1445)
Q Consensus 816 ~~~~~~~ 822 (1445)
+++++.+
T Consensus 536 ~~~~l~~ 542 (544)
T TIGR01842 536 ERDEVLA 542 (544)
T ss_pred CHHHHhh
Confidence 9998864
No 58
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=3.4e-62 Score=622.89 Aligned_cols=533 Identities=19% Similarity=0.210 Sum_probs=413.5
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 273 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRS 352 (1445)
Q Consensus 273 l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~ 352 (1445)
.++.++..++..++..++..++.++.|+++..++|.+.++.. . ..+++.++++.++..+......+...+...++|.
T Consensus 13 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (588)
T PRK13657 13 YLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKGD--I-FPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRL 89 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566677778888999999999999999999998765321 1 1112222222333333344445566778888899
Q ss_pred HHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHH---HHHHhhHhHHHHHHHHHHH
Q 000522 353 SIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVA---LYLLYTQVKFAFVSGLAIT 428 (1445)
Q Consensus 353 ~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~---~~lL~~~lg~a~l~~~~~~ 428 (1445)
.+...+|+|.++++.....+.+.|++.+.++.|++.+..... .+..+....+..++. ++.+.+.+++.++++ +
T Consensus 90 ~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~---~ 166 (588)
T PRK13657 90 AVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVL---G 166 (588)
T ss_pred HHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H
Confidence 999999999999999888889999999999999999875432 333333333222222 223333444443333 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 429 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 508 (1445)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 508 (1445)
++...+..++.++..+.+++.++..++..+...|.++|+++||.|+.|+.+.+++.+.-++-.+...+..........+.
T Consensus 167 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (588)
T PRK13657 167 IVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLN 246 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344566778888888888999999999999999999999999999998777776654333333222222222221111
Q ss_pred --HHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhc
Q 000522 509 --ATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 586 (1445)
Q Consensus 509 --~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~ 586 (1445)
......+.+++++.|.+..+.+|++.+++++.++..+..|+..+...+..+.++..+++|+.++++.++..+....
T Consensus 247 ~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~-- 324 (588)
T PRK13657 247 RAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPG-- 324 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCC--
Confidence 1112234556778888888999999999999999999999999999999999999999999999876432111000
Q ss_pred CCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCe
Q 000522 587 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 666 (1445)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G 666 (1445)
... ....+..|+++|++|+|+.+ + ++|+|+||++++|++++|+|+||||||||+++|+|+++|++|
T Consensus 325 -~~~--------~~~~~~~I~~~~vsf~y~~~--~---~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G 390 (588)
T PRK13657 325 -AID--------LGRVKGAVEFDDVSFSYDNS--R---QGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSG 390 (588)
T ss_pred -CCC--------cCCCCCeEEEEEEEEEeCCC--C---ceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCC
Confidence 000 01123469999999999632 2 359999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000522 667 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1445)
Q Consensus 667 ~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~ 732 (1445)
+|.++| .|+||||+|++|++||||||.++++ .++++..++++.+++++.+..+|+|.+|.+|++|.
T Consensus 391 ~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~ 470 (588)
T PRK13657 391 RILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGR 470 (588)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCC
Confidence 999987 6999999999999999999999864 67788999999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEE
Q 000522 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1445)
Q Consensus 733 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~ 812 (1445)
+||||||||++||||++++|+|++||||||+||+++++.+++.+ .. ..+++|+|+||||++.++.||+|++|++|++.
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l-~~-~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~ 548 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAAL-DE-LMKGRTTFIIAHRLSTVRNADRILVFDNGRVV 548 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHH-HH-HhcCCEEEEEEecHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999998873 33 44689999999999999999999999999999
Q ss_pred EecCHhHHHhccccCcc
Q 000522 813 WIGSSADLAVSLYSGFW 829 (1445)
Q Consensus 813 ~~g~~~~~~~~~~~~~~ 829 (1445)
+.|+++++++..+.+.+
T Consensus 549 ~~g~~~~l~~~~~~y~~ 565 (588)
T PRK13657 549 ESGSFDELVARGGRFAA 565 (588)
T ss_pred EeCCHHHHHHCCChHHH
Confidence 99999999866544433
No 59
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-64 Score=631.28 Aligned_cols=439 Identities=21% Similarity=0.331 Sum_probs=335.5
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|.. ..+|+|+||++++||+++|+||||||||||+++|+|..+|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 78 (510)
T PRK09700 5 YISMAGIGKSFGP------VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAA 78 (510)
T ss_pred eEEEeeeEEEcCC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHH
Confidence 4789999998852 2359999999999999999999999999999999999999999999875
Q ss_pred --eEEEEcCCCCCCCc-cHHHHHhcCCC-----C-----Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000522 673 --SIAYVPQVPWILSG-TIRDNILFGKN-----Y-----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1445)
Q Consensus 673 --~i~y~~Q~p~l~~~-ti~~nI~~g~~-----~-----~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LS 735 (1445)
.++|++|++.++.. |++||+.++.. + +. ++..++++.+++.. .......+||
T Consensus 79 ~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS 147 (510)
T PRK09700 79 QLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKV-----------DLDEKVANLS 147 (510)
T ss_pred HCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCC-----------CcccchhhCC
Confidence 38999999987765 99999987532 0 11 12334444444432 1234556899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEe
Q 000522 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1445)
Q Consensus 736 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1445)
|||||||+||||++.+|+++||||||++||+.+.+.+.+. +.....+|+|+|++||+++.+.. ||++++|++|++++.
T Consensus 148 gG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~ 226 (510)
T PRK09700 148 ISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLI-MNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCS 226 (510)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeee
Confidence 9999999999999999999999999999999999988876 32212347899999999999875 999999999999877
Q ss_pred cCHhHHHhccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcCccchhhHHHHHh
Q 000522 815 GSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAK 894 (1445)
Q Consensus 815 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~ 894 (1445)
|+++++... +.. ....+
T Consensus 227 g~~~~~~~~------------------------------------------------~~~---~~~~~------------ 243 (510)
T PRK09700 227 GMVSDVSND------------------------------------------------DIV---RLMVG------------ 243 (510)
T ss_pred cchhhCCHH------------------------------------------------HHH---HHhcC------------
Confidence 765432100 000 00000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 895 FSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKV 974 (1445)
Q Consensus 895 ~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~l 974 (1445)
.
T Consensus 244 ------------------------------------~------------------------------------------- 244 (510)
T PRK09700 244 ------------------------------------R------------------------------------------- 244 (510)
T ss_pred ------------------------------------C-------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000522 975 HNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSK 1054 (1445)
Q Consensus 975 h~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~ 1054 (1445)
+
T Consensus 245 -----------~-------------------------------------------------------------------- 245 (510)
T PRK09700 245 -----------E-------------------------------------------------------------------- 245 (510)
T ss_pred -----------C--------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 000522 1055 LQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAA 1134 (1445)
Q Consensus 1055 i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~ 1134 (1445)
.. .
T Consensus 246 -----------~~-----~------------------------------------------------------------- 248 (510)
T PRK09700 246 -----------LQ-----N------------------------------------------------------------- 248 (510)
T ss_pred -----------cc-----c-------------------------------------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCC
Q 000522 1135 FIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLS 1214 (1445)
Q Consensus 1135 ~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~ 1214 (1445)
.. .. ..+. ..++
T Consensus 249 ----------------~~-~~----------------------------------------------~~~~-----~~~~ 260 (510)
T PRK09700 249 ----------------RF-NA----------------------------------------------MKEN-----VSNL 260 (510)
T ss_pred ----------------cc-cc----------------------------------------------cccc-----cccC
Confidence 00 00 0000 0000
Q ss_pred CCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCCh-
Q 000522 1215 PDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV- 1293 (1445)
Q Consensus 1215 ~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~- 1293 (1445)
+....++++|+++.|. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.
T Consensus 261 ---~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~~~ 333 (510)
T PRK09700 261 ---AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRSPL 333 (510)
T ss_pred ---CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCCHH
Confidence 0112599999998763 38999999999999999999999999999999999999999999999999876543
Q ss_pred HhhhcceEEEcCCC---cccCc-cHHHhcCCCCCC------------ChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCC
Q 000522 1294 RDLRGRFAVVPQSP---FLFEG-SLRDNLDPFHMN------------DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGI 1356 (1445)
Q Consensus 1294 ~~lR~~i~~VpQdp---~lF~g-TIReNLdp~~~~------------sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~ 1356 (1445)
+.+|++++|+||++ .+|++ |+++|+...... ...+ ++....+.++.+|+. ........
T Consensus 334 ~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~ 408 (510)
T PRK09700 334 DAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVD-----EQRTAENQRELLALKCHSVNQNIT 408 (510)
T ss_pred HHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHH-----HHHHHHHHHHhcCCCCCCccCccc
Confidence 45678999999984 57765 999998753210 1111 111223444555664 34455566
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEe
Q 000522 1357 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLP 1434 (1445)
Q Consensus 1357 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vv 1434 (1445)
.||||||||++|||||+++|+||||||||++||..+.+.+.+.|++.. ++.|||+|||+++.+.. ||||++|++|+++
T Consensus 409 ~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~ 488 (510)
T PRK09700 409 ELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCEGRLT 488 (510)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEE
Confidence 899999999999999999999999999999999999999999998753 48999999999998765 8999999999999
Q ss_pred eecCC
Q 000522 1435 HCGCA 1439 (1445)
Q Consensus 1435 E~G~p 1439 (1445)
+.+++
T Consensus 489 ~~~~~ 493 (510)
T PRK09700 489 QILTN 493 (510)
T ss_pred EEecC
Confidence 98876
No 60
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.7e-62 Score=617.70 Aligned_cols=522 Identities=20% Similarity=0.238 Sum_probs=412.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 000522 288 KVVNDSIGFAGPLLLNKLIKFLQQGS-GHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYVR 366 (1445)
Q Consensus 288 ~l~~~~~~~~~P~ll~~li~~~~~~~-~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy~K~L~l~ 366 (1445)
.++..++..+.|++++.++|.+.... .....+.+++.++++.++..++.....+...+.+.++...+...+|+|.++++
T Consensus 4 ~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~ 83 (569)
T PRK10789 4 LIIIAMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQH 83 (569)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34556677889999999999875422 22223334444555566677777666777788899999999999999999999
Q ss_pred ccccCCCChhHHHHHHHhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHhHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 367 LAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKF-AFVSGLAITILLIPVNKWIANLIAN 444 (1445)
Q Consensus 367 ~~~~~~~~~g~i~nlms~D~~~i~~~~-~~~~~~~~~p~~i~i~~~lL~~~lg~-a~l~~~~~~~~~~~~~~~~~~~~~~ 444 (1445)
...+.+.+.|++.+.++.|++.+.... ..+..++..++.+++++++++..++| .+++.++++++...+...+.+++.+
T Consensus 84 ~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 84 PEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888899999999999999998654 34555666555544444333223333 2223333333344455666777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
Q 000522 445 ATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP--TLFSLFTFGL 522 (1445)
Q Consensus 445 ~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~--~~~~~~~f~~ 522 (1445)
..++..+..++..+.+.|.++|+++||.+++|+.+.+++.+..++..+...+.....+....+..... ..+.++.+|.
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888888888899999999999999999999998888776544333333333333332222211111 2233456777
Q ss_pred HHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcCCCCcccCCCccCCCC
Q 000522 523 FALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSK 602 (1445)
Q Consensus 523 ~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (1445)
|.+.++.+|++.+++++.+...+..|+..+++.+..+.+++++.+||.++++.++..+... .+ .+..
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~----~~---------~~~~ 310 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS----EP---------VPEG 310 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC----CC---------CCCC
Confidence 8888899999999999999999999999999999999999999999999997653211000 00 0112
Q ss_pred CceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------
Q 000522 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1445)
Q Consensus 603 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 672 (1445)
+..++++|++|+|+..+ +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 311 ~~~I~~~~v~~~y~~~~----~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~ 386 (569)
T PRK10789 311 RGELDVNIRQFTYPQTD----HPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDS 386 (569)
T ss_pred CCcEEEEEEEEECCCCC----CccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHH
Confidence 34689999999997431 2459999999999999999999999999999999999999999999986
Q ss_pred ---eEEEEcCCCCCCCccHHHHHhcCC-CCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHH
Q 000522 673 ---SIAYVPQVPWILSGTIRDNILFGK-NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 748 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~~ti~~nI~~g~-~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARal 748 (1445)
.++||+|+|++|++|++|||.++. +.++++++++++.+++++++..+|+|++|.+|++|.+||||||||++||||+
T Consensus 387 ~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARal 466 (569)
T PRK10789 387 WRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARAL 466 (569)
T ss_pred HHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHH
Confidence 489999999999999999999985 4678899999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHhccccCc
Q 000522 749 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGF 828 (1445)
Q Consensus 749 y~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 828 (1445)
+++|+++|||||||+||+++++++.+. +.. +.+++|+|++||+++.++.||+|++|++|++++.|+++++.++.+.+.
T Consensus 467 l~~~~illlDEpts~LD~~~~~~i~~~-l~~-~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~ 544 (569)
T PRK10789 467 LLNAEILILDDALSAVDGRTEHQILHN-LRQ-WGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYR 544 (569)
T ss_pred hcCCCEEEEECccccCCHHHHHHHHHH-HHH-HhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHH
Confidence 999999999999999999999999987 433 457899999999999999999999999999999999999987655443
No 61
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.2e-64 Score=636.35 Aligned_cols=449 Identities=25% Similarity=0.344 Sum_probs=339.2
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC-------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------- 672 (1445)
.++++|+++.|+.... ...+|+|+||++++||+++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~--~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~ 82 (529)
T PRK15134 5 LLAIENLSVAFRQQQT--VRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHAS 82 (529)
T ss_pred eEEEeceEEEecCCCC--ceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCC
Confidence 5889999999853211 12469999999999999999999999999999999999986 799998754
Q ss_pred ----------eEEEEcCCCC--CCC-ccHHHHHhcCC----CCC----hhhHHHHHHHhcchHHHhhccCCCcccccCCC
Q 000522 673 ----------SIAYVPQVPW--ILS-GTIRDNILFGK----NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKG 731 (1445)
Q Consensus 673 ----------~i~y~~Q~p~--l~~-~ti~~nI~~g~----~~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g 731 (1445)
.+||++|+|. +++ .|+++|+.++. ..+ .++.+++++.+++.... .......
T Consensus 83 ~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~~~~ 154 (529)
T PRK15134 83 EQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLTDYP 154 (529)
T ss_pred HHHHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhhCC
Confidence 3899999985 444 49999986421 122 23445566666664211 0123456
Q ss_pred CccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCC
Q 000522 732 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKG 809 (1445)
Q Consensus 732 ~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G 809 (1445)
.+|||||||||+||||++.+|+++||||||++||+...+.+.+. +..... .++|+|+|||+++.+.. ||+|++|++|
T Consensus 155 ~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G 233 (529)
T PRK15134 155 HQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQL-LRELQQELNMGLLFITHNLSIVRKLADRVAVMQNG 233 (529)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHH-HHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECC
Confidence 78999999999999999999999999999999999999988875 322112 37899999999998875 9999999999
Q ss_pred EEEEecCHhHHHhccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcCccchhhH
Q 000522 810 QVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVY 889 (1445)
Q Consensus 810 ~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 889 (1445)
++++.|+++++.... .. .
T Consensus 234 ~i~~~g~~~~~~~~~---------------------------------------------------------~~-~---- 251 (529)
T PRK15134 234 RCVEQNRAATLFSAP---------------------------------------------------------TH-P---- 251 (529)
T ss_pred EEEEeCCHHHHhhCC---------------------------------------------------------CC-H----
Confidence 999887765542100 00 0
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 890 KNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLR 969 (1445)
Q Consensus 890 ~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~ 969 (1445)
+.+
T Consensus 252 --~~~--------------------------------------------------------------------------- 254 (529)
T PRK15134 252 --YTQ--------------------------------------------------------------------------- 254 (529)
T ss_pred --HHH---------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHH
Q 000522 970 AAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFW 1049 (1445)
Q Consensus 970 ~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~ 1049 (1445)
T Consensus 255 -------------------------------------------------------------------------------- 254 (529)
T PRK15134 255 -------------------------------------------------------------------------------- 254 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 000522 1050 FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRL 1129 (1445)
Q Consensus 1050 ~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l 1129 (1445)
.++. . .+
T Consensus 255 -------~~~~------------~-~~----------------------------------------------------- 261 (529)
T PRK15134 255 -------KLLN------------S-EP----------------------------------------------------- 261 (529)
T ss_pred -------HHHH------------h-Cc-----------------------------------------------------
Confidence 0000 0 00
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccc
Q 000522 1130 QLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCG 1209 (1445)
Q Consensus 1130 ~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~ 1209 (1445)
.. ++..
T Consensus 262 ------------------------~~-----------------------------------------------~~~~--- 267 (529)
T PRK15134 262 ------------------------SG-----------------------------------------------DPVP--- 267 (529)
T ss_pred ------------------------cc-----------------------------------------------cccc---
Confidence 00 0000
Q ss_pred CCCCCCCCCCCccEEEEEEEEEeCC---------CCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcE
Q 000522 1210 YQSLSPDWPFQGLIEFQNVTMRYKP---------SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQ 1280 (1445)
Q Consensus 1210 ~~~~~~~wp~~g~I~f~nVs~~Y~~---------~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~ 1280 (1445)
.++. ....++++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++ ++|+
T Consensus 268 --~~~~---~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~-~~G~ 341 (529)
T PRK15134 268 --LPEP---ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN-SQGE 341 (529)
T ss_pred --cCCC---CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC-CCcE
Confidence 0000 0114899999999952 12469999999999999999999999999999999999995 8999
Q ss_pred EEECCeeCCCCChHh---hhcceEEEcCCC--cccCc-cHHHhcCCCC-----CCChHHHHHHHHHccHHHHHHhCCCc-
Q 000522 1281 ILVDGLNIINTPVRD---LRGRFAVVPQSP--FLFEG-SLRDNLDPFH-----MNDDLKIWSVLEKCHVKEEVEAVGLE- 1348 (1445)
Q Consensus 1281 I~IDG~di~~i~~~~---lR~~i~~VpQdp--~lF~g-TIReNLdp~~-----~~sd~ei~~aL~~~~l~~~i~~lgLd- 1348 (1445)
|.+||.++...+... +|++++||||+| .+|+. |+++|+.... ..+..+. +..+.+.++.+|++
T Consensus 342 i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~ 416 (529)
T PRK15134 342 IWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQR-----EQQVIAVMEEVGLDP 416 (529)
T ss_pred EEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHH-----HHHHHHHHHHcCCCH
Confidence 999999998776543 477899999998 36664 9999996421 0111111 11123344445665
Q ss_pred hhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEE
Q 000522 1349 TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEI 1425 (1445)
Q Consensus 1349 t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI 1425 (1445)
........+||||||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|
T Consensus 417 ~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~~~~d~i 496 (529)
T PRK15134 417 ETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVRALCHQV 496 (529)
T ss_pred HHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhcCeE
Confidence 24556667899999999999999999999999999999999999999999998764 37899999999999875 8999
Q ss_pred EEEeCCeEeeecCCCC
Q 000522 1426 LILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1426 ~Vl~~G~vvE~G~p~~ 1441 (1445)
++|++|++++.|++++
T Consensus 497 ~~l~~G~i~~~~~~~~ 512 (529)
T PRK15134 497 IVLRQGEVVEQGDCER 512 (529)
T ss_pred EEEECCEEEEEcCHHH
Confidence 9999999999998865
No 62
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.1e-62 Score=563.46 Aligned_cols=530 Identities=20% Similarity=0.268 Sum_probs=446.1
Q ss_pred chHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 267 PSLVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKL 346 (1445)
Q Consensus 267 ~~l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~ 346 (1445)
.....+....++..++..+++..+.+++.++.|+++-++.|.+-.+.+......+.+....+|+++.+++....+...|+
T Consensus 11 ~~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Ri 90 (580)
T COG4618 11 KNLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRI 90 (580)
T ss_pred CchhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667778888888999999999999999999999999999998877777888888888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhhHhHHHH
Q 000522 347 KLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-----NSFHDAWSLPFQIGVALYLLYTQVKFAF 421 (1445)
Q Consensus 347 ~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~-----~~~~~~~~~p~~i~i~~~lL~~~lg~a~ 421 (1445)
+.++...|...||.-+++.+..........+.+ .|.+.+..+. ..+.+..+.|+.+++ +|+++..+|+.+
T Consensus 91 g~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v-~fl~Hp~lG~~a 165 (580)
T COG4618 91 GERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMPLYLAV-IFLFHPWLGLIA 165 (580)
T ss_pred HHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHHHHHHH-HHHHHHHHHHHH
Confidence 999999999999999976554433222222222 3556666554 357788889999887 789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 422 VSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLD 501 (1445)
Q Consensus 422 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~ 501 (1445)
++|.++++++..+|-.+++ +-.++-.+..-+|....+..++|..+|+.+|+.+...+++.+....-++...+..-..
T Consensus 166 ~~ga~iLv~la~ln~~~t~---~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~ 242 (580)
T COG4618 166 LAGAIILVVLALLNERATR---KPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRN 242 (580)
T ss_pred HHHHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999888888877776665 4556677888899999999999999999999999999999887766666555443332
Q ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Q 000522 502 AWCVFFWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYK 579 (1445)
Q Consensus 502 ~~~~~~~~~~~~--~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~ 579 (1445)
.....+.-..-. -+.++..|+|++.++++|+|.++++-.+......|+......+.++..|+.|.+|++++|......
T Consensus 243 ~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~ 322 (580)
T COG4618 243 GAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAA 322 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 222222111111 134567888999999999999999999999999999999999999999999999999999643221
Q ss_pred hhhhhhcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhc
Q 000522 580 HELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILG 659 (1445)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g 659 (1445)
+... .. +.+++.+.++++++.-+.. .+++++|+||++++||.++||||||||||||.++|.|
T Consensus 323 ~~~m---~L-----------P~P~g~L~Ve~l~~~PPg~----~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG 384 (580)
T COG4618 323 AERM---PL-----------PAPQGALSVERLTAAPPGQ----KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVG 384 (580)
T ss_pred cCCC---CC-----------CCCCceeeEeeeeecCCCC----CCcceecceeEecCCceEEEECCCCccHHHHHHHHHc
Confidence 1110 11 2356788999999964322 2456999999999999999999999999999999999
Q ss_pred CccCCCeEEEEcC-------------eEEEEcCCCCCCCccHHHHHh-cCCCCChhhHHHHHHHhcchHHHhhccCCCcc
Q 000522 660 EMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNIL-FGKNYDPQSYSETLKACTLDVDISLMVGGDMA 725 (1445)
Q Consensus 660 ~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~-~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t 725 (1445)
..+|.+|.|++|| +|||.||+..||.|||+|||. |+.+.|+++.-++.++.+.++-|..+|+|++|
T Consensus 385 ~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT 464 (580)
T COG4618 385 IWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDT 464 (580)
T ss_pred ccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccC
Confidence 9999999999987 699999999999999999996 88888999999999999999999999999999
Q ss_pred cccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEE
Q 000522 726 YIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVV 805 (1445)
Q Consensus 726 ~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~ 805 (1445)
.||+.|.+|||||||||+||||+|.+|.+++||||.|+||.+.+..+.+. +.....+|.|+|+||||++.+..+|+|.+
T Consensus 465 ~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~A-i~~~k~rG~~vvviaHRPs~L~~~Dkilv 543 (580)
T COG4618 465 RIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAA-ILAAKARGGTVVVIAHRPSALASVDKILV 543 (580)
T ss_pred ccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHH-HHHHHHcCCEEEEEecCHHHHhhcceeee
Confidence 99999999999999999999999999999999999999999988888776 54446678899999999999999999999
Q ss_pred EeCCEEEEecCHhHHHhc
Q 000522 806 MDKGQVKWIGSSADLAVS 823 (1445)
Q Consensus 806 l~~G~i~~~g~~~~~~~~ 823 (1445)
|+||++...|+.+|++++
T Consensus 544 l~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 544 LQDGRIAAFGPREEVLAK 561 (580)
T ss_pred ecCChHHhcCCHHHHHHH
Confidence 999999999999998765
No 63
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=2.2e-64 Score=633.29 Aligned_cols=434 Identities=22% Similarity=0.341 Sum_probs=332.1
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCc--cCCCeEEEEc------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM--MLTHGSIHAS------------ 671 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~--~~~~G~i~~~------------ 671 (1445)
++++|++++|.. +.+|+|+||++++|++++|+||||||||||+++|+|.. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~ 74 (520)
T TIGR03269 1 IEVKNLTKKFDG------KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVER 74 (520)
T ss_pred CEEEEEEEEECC------eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEecccccccccccc
Confidence 357888988842 23599999999999999999999999999999999996 7999999875
Q ss_pred -----------C-----------------------eEEEEcCC-CCCCC-ccHHHHHhcCCC---CC----hhhHHHHHH
Q 000522 672 -----------G-----------------------SIAYVPQV-PWILS-GTIRDNILFGKN---YD----PQSYSETLK 708 (1445)
Q Consensus 672 -----------~-----------------------~i~y~~Q~-p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~ 708 (1445)
| .++|++|+ +.+++ .|++||+.++.. ++ .++..++++
T Consensus 75 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~ 154 (520)
T TIGR03269 75 PSKVGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAVGRAVDLIE 154 (520)
T ss_pred ccccccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 1 38999997 56665 599999987521 22 134555666
Q ss_pred HhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceE
Q 000522 709 ACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTR 787 (1445)
Q Consensus 709 ~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ 787 (1445)
.++++... .....+|||||||||+||||++.+|+++||||||++||+.+.+.+.+. +..... .|+|+
T Consensus 155 ~~gl~~~~-----------~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tv 222 (520)
T TIGR03269 155 MVQLSHRI-----------THIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA-LEEAVKASGISM 222 (520)
T ss_pred HcCChhhh-----------hcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH-HHHHHHhcCcEE
Confidence 66664332 334568999999999999999999999999999999999999998775 332112 37899
Q ss_pred EEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHHhccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccC
Q 000522 788 ILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSV 866 (1445)
Q Consensus 788 ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 866 (1445)
|+|||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 223 iivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~------------------------------------------- 259 (520)
T TIGR03269 223 VLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAV------------------------------------------- 259 (520)
T ss_pred EEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHH-------------------------------------------
Confidence 999999999875 999999999998765543221000
Q ss_pred CchhhHHHHHHHHhcCccchhhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHH
Q 000522 867 SDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLC 946 (1445)
Q Consensus 867 ~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~ 946 (1445)
|. .
T Consensus 260 -------------------------~~---------------------------------~------------------- 262 (520)
T TIGR03269 260 -------------------------FM---------------------------------E------------------- 262 (520)
T ss_pred -------------------------HH---------------------------------h-------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHh
Q 000522 947 IFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVG 1026 (1445)
Q Consensus 947 ~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~ 1026 (1445)
T Consensus 263 -------------------------------------------------------------------------------- 262 (520)
T TIGR03269 263 -------------------------------------------------------------------------------- 262 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHH
Q 000522 1027 LLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKE 1106 (1445)
Q Consensus 1027 ~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~ 1106 (1445)
....
T Consensus 263 --------------------------------------~~~~-------------------------------------- 266 (520)
T TIGR03269 263 --------------------------------------GVSE-------------------------------------- 266 (520)
T ss_pred --------------------------------------hchh--------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 1107 HVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTET 1186 (1445)
Q Consensus 1107 ~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~ 1186 (1445)
. . .
T Consensus 267 --------------------------------------~-----~--~-------------------------------- 269 (520)
T TIGR03269 267 --------------------------------------V-----E--K-------------------------------- 269 (520)
T ss_pred --------------------------------------h-----c--c--------------------------------
Confidence 0 0 0
Q ss_pred HHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEeCC---CCCccceeeeEEEeCCcEEEEECCCCCCH
Q 000522 1187 EKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKP---SLPAALHDINFTIEGGTQVGIVGRTGAGK 1263 (1445)
Q Consensus 1187 e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~---~~~~vL~~isl~I~~GekvgIvGrTGSGK 1263 (1445)
.++. +. ....++++|++++|+. +..++|+|+||+|++||++||+|+|||||
T Consensus 270 ---------------~~~~-------~~----~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGK 323 (520)
T TIGR03269 270 ---------------ECEV-------EV----GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGK 323 (520)
T ss_pred ---------------cccc-------CC----CCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCH
Confidence 0000 00 1125999999999953 23469999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEC-Ce---eCCCCC---hHhhhcceEEEcCCCcccCc-cHHHhcCCC-C-CCChHHHHHHH
Q 000522 1264 SSILNALFRLTPICGGQILVD-GL---NIINTP---VRDLRGRFAVVPQSPFLFEG-SLRDNLDPF-H-MNDDLKIWSVL 1333 (1445)
Q Consensus 1264 STLl~~L~rl~~~~~G~I~ID-G~---di~~i~---~~~lR~~i~~VpQdp~lF~g-TIReNLdp~-~-~~sd~ei~~aL 1333 (1445)
|||+++|.|+++|++|+|.++ |. ++...+ ...+|++++|+||++.+|+. |+++|+... . ....++.
T Consensus 324 STLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~---- 399 (520)
T TIGR03269 324 TTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELA---- 399 (520)
T ss_pred HHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHH----
Confidence 999999999999999999996 64 344332 23567789999999988875 999999531 1 1111110
Q ss_pred HHccHHHHHHhCCCch-----hhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CC
Q 000522 1334 EKCHVKEEVEAVGLET-----FVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KG 1406 (1445)
Q Consensus 1334 ~~~~l~~~i~~lgLdt-----~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~ 1406 (1445)
+....+.++.+|++. ........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .+
T Consensus 400 -~~~~~~~l~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g 478 (520)
T TIGR03269 400 -RMKAVITLKMVGFDEEKAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEME 478 (520)
T ss_pred -HHHHHHHHHhCCCCCccchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcC
Confidence 111223344445542 2455566899999999999999999999999999999999999999999998764 37
Q ss_pred cEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1407 MTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1407 ~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
.|||+|||+++.+.. ||||++|++|++++.|+|++
T Consensus 479 ~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~ 514 (520)
T TIGR03269 479 QTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEE 514 (520)
T ss_pred cEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 899999999999876 89999999999999998754
No 64
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=5e-64 Score=626.82 Aligned_cols=435 Identities=21% Similarity=0.307 Sum_probs=334.2
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|.. . ++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~i~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~ 77 (501)
T PRK10762 4 LLQLKGIDKAFPG---V---KALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQ 77 (501)
T ss_pred eEEEeeeEEEeCC---e---EEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHH
Confidence 4789999998852 2 359999999999999999999999999999999999999999999875
Q ss_pred --eEEEEcCCCCCCCc-cHHHHHhcCCCC-------Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000522 673 --SIAYVPQVPWILSG-TIRDNILFGKNY-------DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1445)
Q Consensus 673 --~i~y~~Q~p~l~~~-ti~~nI~~g~~~-------~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQ 738 (1445)
.++|++|+|.++.. |++||+.++... +. ++..++++.+++... ......+|||||
T Consensus 78 ~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~ 146 (501)
T PRK10762 78 EAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFS-----------SDKLVGELSIGE 146 (501)
T ss_pred hCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCC-----------ccCchhhCCHHH
Confidence 38999999987764 999999986431 22 123344444444321 234456899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCH
Q 000522 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 817 (1445)
Q Consensus 739 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~ 817 (1445)
|||++||||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|+++..|+.
T Consensus 147 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~ 225 (501)
T PRK10762 147 QQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRV-IRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREV 225 (501)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCc
Confidence 9999999999999999999999999999999988865 32212347899999999998865 999999999999876543
Q ss_pred hHHHhccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcCccchhhHHHHHhhhh
Q 000522 818 ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG 897 (1445)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g 897 (1445)
+++.. ++.
T Consensus 226 ~~~~~-----------------------------------------------------~~~------------------- 233 (501)
T PRK10762 226 ADLTE-----------------------------------------------------DSL------------------- 233 (501)
T ss_pred CcCCH-----------------------------------------------------HHH-------------------
Confidence 22100 000
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 898 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 977 (1445)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ 977 (1445)
...+...
T Consensus 234 ------------------------~~~~~~~------------------------------------------------- 240 (501)
T PRK10762 234 ------------------------IEMMVGR------------------------------------------------- 240 (501)
T ss_pred ------------------------HHHhcCC-------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 978 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1057 (1445)
Q Consensus 978 ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~ 1057 (1445)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 000522 1058 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII 1137 (1445)
Q Consensus 1058 ~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~ 1137 (1445)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCC
Q 000522 1138 SFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDW 1217 (1445)
Q Consensus 1138 ~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~w 1217 (1445)
.. . ..++.. ..+
T Consensus 241 -------------~~-~----------------------------------------------~~~~~~-----~~~--- 252 (501)
T PRK10762 241 -------------KL-E----------------------------------------------DQYPRL-----DKA--- 252 (501)
T ss_pred -------------Cc-c----------------------------------------------cccccc-----ccC---
Confidence 00 0 000000 000
Q ss_pred CCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCCh-Hhh
Q 000522 1218 PFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDL 1296 (1445)
Q Consensus 1218 p~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~l 1296 (1445)
|..-.++++|++. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+
T Consensus 253 ~~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~~~~~~~~~ 325 (501)
T PRK10762 253 PGEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGL 325 (501)
T ss_pred CCCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHH
Confidence 0112588999984 37999999999999999999999999999999999999999999999999977664 346
Q ss_pred hcceEEEcCCC---cccC-ccHHHhcCCCCC---------CChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhH
Q 000522 1297 RGRFAVVPQSP---FLFE-GSLRDNLDPFHM---------NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQ 1362 (1445)
Q Consensus 1297 R~~i~~VpQdp---~lF~-gTIReNLdp~~~---------~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQ 1362 (1445)
|++++|+||+| .+|. -|+++|+..... .+..+. +....+.++.+|++ ...+.....|||||
T Consensus 326 ~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~LSgGe 400 (501)
T PRK10762 326 ANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADE-----QQAVSDFIRLFNIKTPSMEQAIGLLSGGN 400 (501)
T ss_pred HCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHH-----HHHHHHHHHhcCCCCCCccCchhhCCHHH
Confidence 78899999997 3555 599999964210 111111 11233444555663 34566667899999
Q ss_pred HHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCC
Q 000522 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAA 1440 (1445)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~ 1440 (1445)
|||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|++++.|+++
T Consensus 401 kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~G~i~~~~~~~ 480 (501)
T PRK10762 401 QQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHEGRISGEFTRE 480 (501)
T ss_pred HHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEECCEEEEEeccc
Confidence 999999999999999999999999999999999999998864 48899999999998875 8999999999999999987
Q ss_pred CC
Q 000522 1441 AP 1442 (1445)
Q Consensus 1441 ~~ 1442 (1445)
+.
T Consensus 481 ~~ 482 (501)
T PRK10762 481 QA 482 (501)
T ss_pred cC
Confidence 65
No 65
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=2.1e-61 Score=613.01 Aligned_cols=528 Identities=23% Similarity=0.287 Sum_probs=418.2
Q ss_pred HhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 277 YGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMT 356 (1445)
Q Consensus 277 ~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~ 356 (1445)
++ .++...++.++..++....|.++..+++.+.. .......+...+++++++..++...+.+...+.+.++...+..
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~ 89 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA--DLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRR 89 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 77888888899999999999999999988761 1222233333444444456666666667777777999999999
Q ss_pred HHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHH-HHHHHHHHHHHH---hhHhHHHHHHHHHHHHHHH
Q 000522 357 IIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWS-LPFQIGVALYLL---YTQVKFAFVSGLAITILLI 432 (1445)
Q Consensus 357 ~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~-~p~~i~i~~~lL---~~~lg~a~l~~~~~~~~~~ 432 (1445)
.+|+|.++++...+.+...|++++.++.|++.+............ +++.++..+.++ .+.+++..+.++ +++.
T Consensus 90 ~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~---~~~~ 166 (567)
T COG1132 90 DLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLIL---PLLA 166 (567)
T ss_pred HHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH---HHHH
Confidence 999999999998888888999999999999999987766422222 333333322222 233443333332 2333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH
Q 000522 433 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFF--WAT 510 (1445)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~--~~~ 510 (1445)
....++.++..+..++..+..++..+.+.|.++|++.||.++.|+...++..+..++..+...+........... ...
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (567)
T COG1132 167 LVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLS 246 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555656678888888899999999999999999999999999876666655443333332222222222211 112
Q ss_pred HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcCCCC
Q 000522 511 TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 590 (1445)
Q Consensus 511 ~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~ 590 (1445)
.-....++.++.+.+..+.++.+.+.+.+.++..+..|+..+...+..+..+..+.+|+.++++.++...... .+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~----~~- 321 (567)
T COG1132 247 SLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPP----DP- 321 (567)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCC----CC-
Confidence 2223345566777777888999999999999999999999999999999999999999999998744211000 00
Q ss_pred cccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEE
Q 000522 591 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 670 (1445)
Q Consensus 591 ~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~ 670 (1445)
....+..|+++|++|+|+++ +++|+|+||++++||.++||||+||||||++++|+|+++|++|+|.+
T Consensus 322 --------~~~~~~~I~f~~vsf~y~~~-----~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~i 388 (567)
T COG1132 322 --------LKDTIGSIEFENVSFSYPGK-----KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILI 388 (567)
T ss_pred --------CCCCCCeEEEEEEEEEcCCC-----CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEE
Confidence 01234569999999999742 34599999999999999999999999999999999999999999999
Q ss_pred cC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000522 671 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1445)
Q Consensus 671 ~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSG 736 (1445)
|| +||||||+|+||++||+|||.+|++ .++++..++++.+++++.++.+|+|++|.|||+|.+|||
T Consensus 389 dg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSg 468 (567)
T COG1132 389 DGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSG 468 (567)
T ss_pred CCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCH
Confidence 87 5999999999999999999999987 588899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecC
Q 000522 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 816 (1445)
Q Consensus 737 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~ 816 (1445)
|||||++||||++++|+|++||||||+||+++++.|.+.. .. +.++||+|+|+||++.+..||+|++|++|+|++.|+
T Consensus 469 GQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l-~~-l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~ 546 (567)
T COG1132 469 GQRQRLAIARALLRNPPILILDEATSALDTETEALIQDAL-KK-LLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGT 546 (567)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHH-HH-HhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecC
Confidence 9999999999999999999999999999999999999874 32 457789999999999999999999999999999999
Q ss_pred HhHHHhccccCccc
Q 000522 817 SADLAVSLYSGFWS 830 (1445)
Q Consensus 817 ~~~~~~~~~~~~~~ 830 (1445)
|+|++++++.+.++
T Consensus 547 h~eLl~~~g~y~~l 560 (567)
T COG1132 547 HEELLAKGGLYARL 560 (567)
T ss_pred HHHHHHcCCHHHHH
Confidence 99999876655443
No 66
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-61 Score=570.22 Aligned_cols=524 Identities=23% Similarity=0.279 Sum_probs=421.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000522 284 LGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCL 363 (1445)
Q Consensus 284 ~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy~K~L 363 (1445)
..++..+..+....|-.++-..++.+-..+.....+.++++++++.++.+++.....+..++.+.++|..|...+++|..
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~ 84 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQLFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLA 84 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555666667777777766655443334455667778888899999999999999999999999999999999999
Q ss_pred cCCccccCCCChhHHHHHHHhhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHH
Q 000522 364 YVRLAERSEFSDGEIQTFMSVDTDRTVNLAN----SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWIA 439 (1445)
Q Consensus 364 ~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~----~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~~~~~~~~~~~~~ 439 (1445)
+++....+..++|+..+++..-+|.+...+. .+...-..|+-+.++++++.+.-|+..+..+.++.+++ ..++
T Consensus 85 ~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfM---ilvg 161 (559)
T COG4988 85 KLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFM---ILVG 161 (559)
T ss_pred hCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH---HHHH
Confidence 9998888888899999999999998887542 33444567888888888888877766665555444443 3445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 440 NLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMK----TRSSEVKHLSTRKYLDAWCVFFWATTPTLF 515 (1445)
Q Consensus 440 ~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~----~R~~El~~~~~~~~~~~~~~~~~~~~~~~~ 515 (1445)
+..++..+++++.-..-....-+-|+|+.++|.|+..+...++|.+ .|+.-|+.++-...-.+..-++... .+..
T Consensus 162 ~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~l-siAl 240 (559)
T COG4988 162 LAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYL-SIAL 240 (559)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 5566777778888888888899999999999999988777766654 5666666665433222233333222 2222
Q ss_pred HHHHHHHHHHhC-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcCCCCcccC
Q 000522 516 SLFTFGLFALMG-HQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISN 594 (1445)
Q Consensus 516 ~~~~f~~~~~~~-~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~ 594 (1445)
..+.+| +.+.+ ++++....+.++.+---+-.|+..+...+..-+++..+.+++..|++.|............
T Consensus 241 vAv~~g-~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~------ 313 (559)
T COG4988 241 VAVYIG-FRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEV------ 313 (559)
T ss_pred HHHHHH-HHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCcccccc------
Confidence 233333 33445 6899999999999999999999999999999999999999999999877543311100000
Q ss_pred CCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--
Q 000522 595 GLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-- 672 (1445)
Q Consensus 595 ~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-- 672 (1445)
...+...+..+|.+|.|+..+ ++++|+||++++|++++|||+||||||||+++|+|+.+|++|+|.++|
T Consensus 314 ----~~~~~~ei~~~~l~~~y~~g~-----~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~ 384 (559)
T COG4988 314 ----ANEPPIEISLENLSFRYPDGK-----PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGID 384 (559)
T ss_pred ----ccCCCceeeecceEEecCCCC-----cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCcc
Confidence 012234555669999997531 459999999999999999999999999999999999999999999987
Q ss_pred -----------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHH
Q 000522 673 -----------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 740 (1445)
Q Consensus 673 -----------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkq 740 (1445)
+++||||+|.||+|||||||+++++ -+++...++++..+|.+.++. |+|.+|++||+|.+|||||+|
T Consensus 385 l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~Q 463 (559)
T COG4988 385 LRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQ 463 (559)
T ss_pred ccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHH
Confidence 5999999999999999999999987 568899999999999999998 999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHH
Q 000522 741 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 820 (1445)
Q Consensus 741 Rv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~ 820 (1445)
||+||||+++++++|+||||||+||.++++.|.+. +.. +.++||+|+||||++.+..+|+|++|++|+++++|+++++
T Consensus 464 RlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~-l~~-l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L 541 (559)
T COG4988 464 RLALARALLSPASLLLLDEPTAHLDAETEQIILQA-LQE-LAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEEL 541 (559)
T ss_pred HHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHH-HHH-HHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHH
Confidence 99999999999999999999999999999998887 443 6788999999999999999999999999999999999999
Q ss_pred HhccccCccc
Q 000522 821 AVSLYSGFWS 830 (1445)
Q Consensus 821 ~~~~~~~~~~ 830 (1445)
.++++.+..+
T Consensus 542 ~~~~~~y~~l 551 (559)
T COG4988 542 SEKQGLYANL 551 (559)
T ss_pred hhcCcHHHHH
Confidence 8877666554
No 67
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=3.1e-61 Score=607.40 Aligned_cols=507 Identities=21% Similarity=0.212 Sum_probs=400.4
Q ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 278 GYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMT 356 (1445)
Q Consensus 278 ~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~ 356 (1445)
++.++..+++.++..++....|++++.++|.+. +.......+.+++.++++.++..++.....+...+++.++...+..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 2 RRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677788889999999999999999999874 3222223334455555666777788888888889999999999999
Q ss_pred HHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHhhHhHHHHHHHHHHHHHHH
Q 000522 357 IIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY---LLYTQVKFAFVSGLAITILLI 432 (1445)
Q Consensus 357 ~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~---lL~~~lg~a~l~~~~~~~~~~ 432 (1445)
.+|+|.++++.....+.+.|+++|.++.|++.+.+... .+..+....+.+++++. .+.+.+++..+++++ +..
T Consensus 82 ~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~---l~~ 158 (529)
T TIGR02857 82 RLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAP---LIP 158 (529)
T ss_pred HHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH---HHH
Confidence 99999999999888889999999999999999997654 35555544444433333 233444444333322 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 433 PVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP 512 (1445)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~ 512 (1445)
.+..++.++..+..++.++..+++.+.+.|.++|+++||.|++|+.+.+++++.-++..+...+..........+.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (529)
T TIGR02857 159 IFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFA 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23355677777888888899999999999999999999999999999888876644433333333333332222222211
Q ss_pred HHH--HHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcCCCC
Q 000522 513 TLF--SLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPS 590 (1445)
Q Consensus 513 ~~~--~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~ 590 (1445)
.+. .++.++.+.+..+.++.+.+++++.+...+..|+..+...+..+.++..+++|+.++++.++.+.... ..+
T Consensus 239 ~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~---~~~- 314 (529)
T TIGR02857 239 TLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA---PVT- 314 (529)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc---CCC-
Confidence 111 12234445555778999999999999999999999999999999999999999999997442111000 000
Q ss_pred cccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEE
Q 000522 591 YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHA 670 (1445)
Q Consensus 591 ~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~ 670 (1445)
......++++|++|+|+..+ +++|+|+||++++|+.++|+||||||||||+++|+|+++|++|+|.+
T Consensus 315 ---------~~~~~~i~~~~v~f~y~~~~----~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~ 381 (529)
T TIGR02857 315 ---------AAPAPSLEFSGLSVAYPGRR----APALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAV 381 (529)
T ss_pred ---------CCCCCeEEEEEEEEECCCCC----cccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Confidence 01224699999999997431 24599999999999999999999999999999999999999999999
Q ss_pred cC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000522 671 SG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1445)
Q Consensus 671 ~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSG 736 (1445)
+| .++||+|+|++|++||||||.++.+ .++++.+++++.++++++++.+|+|++|.+||+|.+|||
T Consensus 382 ~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSg 461 (529)
T TIGR02857 382 NGVPLADADADSWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSG 461 (529)
T ss_pred CCEehhhCCHHHHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCH
Confidence 87 4999999999999999999999864 677899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEE
Q 000522 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVM 806 (1445)
Q Consensus 737 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l 806 (1445)
|||||++||||++++|++++||||||+||+++++.+++. +.. ..+++|+|+||||++.+..||+|++|
T Consensus 462 Gq~qri~laRal~~~~~ililDE~ts~lD~~~~~~i~~~-l~~-~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 462 GQAQRLALARAFLRDAPLLLLDEPTAHLDAETEALVTEA-LRA-LAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999999999999887 444 45789999999999999999999985
No 68
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.8e-63 Score=622.66 Aligned_cols=447 Identities=22% Similarity=0.295 Sum_probs=332.2
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccC--CCeEEEEcC-----------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML--THGSIHASG----------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~--~~G~i~~~~----------- 672 (1445)
++++|+++.|.. .++|+|+||++++|++++|+||||||||||+++|.|+.+| ++|+|.++|
T Consensus 2 l~i~~l~~~~~~------~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~ 75 (500)
T TIGR02633 2 LEMKGIVKTFGG------VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDT 75 (500)
T ss_pred EEEEeEEEEeCC------eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHH
Confidence 578899998852 2359999999999999999999999999999999999987 799999875
Q ss_pred ---eEEEEcCCCCCCCc-cHHHHHhcCCCC-------Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchH
Q 000522 673 ---SIAYVPQVPWILSG-TIRDNILFGKNY-------DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~-------~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGG 737 (1445)
.++|++|+|.++.. |++||+.++... +. ++.+++++.+++.... + .....+||||
T Consensus 76 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~----~~~~~~LSgG 145 (500)
T TIGR02633 76 ERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADN------V----TRPVGDYGGG 145 (500)
T ss_pred HhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCc------c----cCchhhCCHH
Confidence 38999999987765 999999886431 11 1233344444432111 0 1235689999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecC
Q 000522 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 816 (1445)
Q Consensus 738 QkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~ 816 (1445)
|||||+||||++.+|+++||||||++||+...+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+
T Consensus 146 ~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~ 224 (500)
T TIGR02633 146 QQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDI-IRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKD 224 (500)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecC
Confidence 99999999999999999999999999999999988876 33212357899999999999876 99999999999875543
Q ss_pred HhHHHhccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcCccchhhHHHHHhhh
Q 000522 817 SADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFS 896 (1445)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~ 896 (1445)
.+++. . . . .
T Consensus 225 ~~~~~------------------------------------------------~-----~--------~--~-------- 233 (500)
T TIGR02633 225 MSTMS------------------------------------------------E-----D--------D--I-------- 233 (500)
T ss_pred cccCC------------------------------------------------H-----H--------H--H--------
Confidence 11100 0 0 0 0
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 897 GWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHN 976 (1445)
Q Consensus 897 g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~ 976 (1445)
+....
T Consensus 234 -------------------------~~~~~-------------------------------------------------- 238 (500)
T TIGR02633 234 -------------------------ITMMV-------------------------------------------------- 238 (500)
T ss_pred -------------------------HHHHh--------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 977 TLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQ 1056 (1445)
Q Consensus 977 ~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~ 1056 (1445)
T Consensus 239 -------------------------------------------------------------------------------- 238 (500)
T TIGR02633 239 -------------------------------------------------------------------------------- 238 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Q 000522 1057 FFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFI 1136 (1445)
Q Consensus 1057 ~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~ 1136 (1445)
.+
T Consensus 239 ----------------~~-------------------------------------------------------------- 240 (500)
T TIGR02633 239 ----------------GR-------------------------------------------------------------- 240 (500)
T ss_pred ----------------Cc--------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCC
Q 000522 1137 ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPD 1216 (1445)
Q Consensus 1137 ~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~ 1216 (1445)
. .. . ..+.+. .+
T Consensus 241 --------------~--~~---~-----------------------------------------~~~~~~-----~~--- 252 (500)
T TIGR02633 241 --------------E--IT---S-----------------------------------------LYPHEP-----HE--- 252 (500)
T ss_pred --------------c--cc---c-----------------------------------------cccccc-----cC---
Confidence 0 00 0 000000 00
Q ss_pred CCCCccEEEEEEEEEeCCC-CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-CCcEEEECCeeCCCCC-h
Q 000522 1217 WPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-CGGQILVDGLNIINTP-V 1293 (1445)
Q Consensus 1217 wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-~~G~I~IDG~di~~i~-~ 1293 (1445)
+.+-.++++|++++|+.+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.++|.++...+ .
T Consensus 253 -~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~~~~~~~~~ 331 (500)
T TIGR02633 253 -IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGKPVDIRNPA 331 (500)
T ss_pred -CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCEECCCCCHH
Confidence 011258999999999432 24699999999999999999999999999999999999995 8999999999986544 3
Q ss_pred HhhhcceEEEcCCC---cccC-ccHHHhcCCCCC--CCh-HHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHH
Q 000522 1294 RDLRGRFAVVPQSP---FLFE-GSLRDNLDPFHM--NDD-LKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQL 1365 (1445)
Q Consensus 1294 ~~lR~~i~~VpQdp---~lF~-gTIReNLdp~~~--~sd-~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQr 1365 (1445)
..+|++++++||++ .+|+ -|+++|+..... ... ..+...-.+....+.++.+|+.. ........||||||||
T Consensus 332 ~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~LSgGqkqr 411 (500)
T TIGR02633 332 QAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPIGRLSGGNQQK 411 (500)
T ss_pred HHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCccccCCHHHHHH
Confidence 56788999999996 4666 499999975310 100 00000001112233444445532 2344456799999999
Q ss_pred HHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++||||++++|++|||||||++||..+.+.+.+.|++.. ++.|||+|||+++.+.+ ||+|++|++|+++..++..+.
T Consensus 412 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 412 AVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVIGEGKLKGDFVNHAL 490 (500)
T ss_pred HHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccC
Confidence 999999999999999999999999999999999988753 48899999999999876 899999999999988765443
No 69
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2.1e-63 Score=621.34 Aligned_cols=448 Identities=21% Similarity=0.354 Sum_probs=341.1
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1445)
..++++|+++.|.. +.+|+|+||++++|++++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 10 ~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 83 (510)
T PRK15439 10 PLLCARSISKQYSG------VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKA 83 (510)
T ss_pred ceEEEEeEEEEeCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHH
Confidence 35899999999852 2359999999999999999999999999999999999999999999876
Q ss_pred ---eEEEEcCCCCCCCc-cHHHHHhcCCCCC---hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000522 673 ---SIAYVPQVPWILSG-TIRDNILFGKNYD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~~---~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 745 (1445)
.+||++|++.++.. |++||+.++.... +++..++++..++..+ ......+|||||||||+||
T Consensus 84 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la 152 (510)
T PRK15439 84 HQLGIYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLD-----------LDSSAGSLEVADRQIVEIL 152 (510)
T ss_pred HhCCEEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCcc-----------ccCChhhCCHHHHHHHHHH
Confidence 38999999988765 9999999875322 2345556666665422 2344568999999999999
Q ss_pred HHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHHhcc
Q 000522 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVSL 824 (1445)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~~~~ 824 (1445)
||++.+|+++||||||++||+...+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 153 ~aL~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 231 (510)
T PRK15439 153 RGLMRDSRILILDEPTASLTPAETERLFSR-IRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD 231 (510)
T ss_pred HHHHcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH
Confidence 999999999999999999999999988876 33212347899999999998865 9999999999999887765531100
Q ss_pred ccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcCccchhhHHHHHhhhhHHHHHHH
Q 000522 825 YSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITLVI 904 (1445)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~~~ 904 (1445)
.
T Consensus 232 ------------------------------------------------~------------------------------- 232 (510)
T PRK15439 232 ------------------------------------------------I------------------------------- 232 (510)
T ss_pred ------------------------------------------------H-------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000522 905 CLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVN 984 (1445)
Q Consensus 905 ~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~ 984 (1445)
+..+... . ..
T Consensus 233 -----------------~~~~~~~---~-~~------------------------------------------------- 242 (510)
T PRK15439 233 -----------------IQAITPA---A-RE------------------------------------------------- 242 (510)
T ss_pred -----------------HHHHhCc---c-cc-------------------------------------------------
Confidence 0000000 0 00
Q ss_pred CcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 985 APVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSR 1064 (1445)
Q Consensus 985 ~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr 1064 (1445)
.
T Consensus 243 -------------------------------------------------------------------------------~ 243 (510)
T PRK15439 243 -------------------------------------------------------------------------------K 243 (510)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred HHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Q 000522 1065 ELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA 1144 (1445)
Q Consensus 1065 ~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~ 1144 (1445)
+.+. . .+.
T Consensus 244 ~~~~-----~-------------------------------------~~~------------------------------ 251 (510)
T PRK15439 244 SLSA-----S-------------------------------------QKL------------------------------ 251 (510)
T ss_pred cccc-----c-------------------------------------ccc------------------------------
Confidence 0000 0 000
Q ss_pred HHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEE
Q 000522 1145 VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIE 1224 (1445)
Q Consensus 1145 v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~ 1224 (1445)
. . ..+... ...+ +..-.++
T Consensus 252 ------~--~----------------------------------------------~~~~~~----~~~~---~~~~~l~ 270 (510)
T PRK15439 252 ------W--L----------------------------------------------ELPGNR----RQQA---AGAPVLT 270 (510)
T ss_pred ------c--c----------------------------------------------cccccc----cccC---CCCceEE
Confidence 0 0 000000 0000 0112589
Q ss_pred EEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHh-hhcceEEE
Q 000522 1225 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRFAVV 1303 (1445)
Q Consensus 1225 f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i~~V 1303 (1445)
++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|++++|+
T Consensus 271 ~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v 343 (510)
T PRK15439 271 VEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQRLARGLVYL 343 (510)
T ss_pred EeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHHHHhCCcEEC
Confidence 999983 2699999999999999999999999999999999999999999999999998776654 46789999
Q ss_pred cCCC---cccCc-cHHHhcCCC--C--C-C-ChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1304 PQSP---FLFEG-SLRDNLDPF--H--M-N-DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1304 pQdp---~lF~g-TIReNLdp~--~--~-~-sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
||++ .+|.. |+++|+... . . . ...+. +..+.+.++.+|++ .........||||||||++||||+
T Consensus 344 ~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~~LSgG~kqrl~la~al 418 (510)
T PRK15439 344 PEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARE-----NAVLERYRRALNIKFNHAEQAARTLSGGNQQKVLIAKCL 418 (510)
T ss_pred CCChhhCCccCCCcHHHHHHhhhhhhhccccChHHH-----HHHHHHHHHHcCCCCCCccCccccCCcHHHHHHHHHHHH
Confidence 9996 36654 999998432 1 0 0 11111 11233445555775 455666678999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|+++..|+|++.
T Consensus 419 ~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~~~~ 490 (510)
T PRK15439 419 EASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTGAAI 490 (510)
T ss_pred hhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEccccC
Confidence 99999999999999999999999999998753 48999999999999976 899999999999999998764
No 70
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.4e-61 Score=664.60 Aligned_cols=534 Identities=19% Similarity=0.193 Sum_probs=381.9
Q ss_pred hhhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 886 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 965 (1445)
Q Consensus 886 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~ 965 (1445)
.+..+..++..++..+... +..++..++....++.++...+.....+.......|+.++++..++..++.....+....
T Consensus 289 ~~l~~~l~~~~~~~~~~~~-~~~i~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 367 (1495)
T PLN03232 289 PWLLRALNNSLGGRFWLGG-IFKIGHDLSQFVGPVILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGR 367 (1495)
T ss_pred chHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455566665555544333 334555666666677666655432211111111112222222222222222112222346
Q ss_pred HHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHH
Q 000522 966 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1045 (1445)
Q Consensus 966 ~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1045 (1445)
.+.+....+...+++++++.|..++++.++|+++||+++|++.+++... .+..+....+.++..++++.....+..++.
T Consensus 368 ~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~~-~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~ 446 (1495)
T PLN03232 368 VGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIAE-QLHGLWSAPFRIIVSMVLLYQQLGVASLFG 446 (1495)
T ss_pred HHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 6777777888899999999999999999999999999999999998753 333333333333333322222111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 000522 1046 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1125 (1445)
Q Consensus 1046 ~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl 1125 (1445)
+++.+++..+..++.+..+..++.....+....+.+.|.++|+++||+|+||+.+.+++.+..+...+..........+.
T Consensus 447 ~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~ 526 (1495)
T PLN03232 447 SLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFN 526 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222222333333334444444455567788999999999999999999999999887766655554443333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q 000522 1126 SLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQE 1205 (1445)
Q Consensus 1126 ~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e 1205 (1445)
......... ++.++.+.+.... .+..++|.+..++++...+..++..+...+..+..+.+|.+|+.++++.+++
T Consensus 527 ~~~~~~~~~-~~~~~~fg~~~v~-----~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~ 600 (1495)
T PLN03232 527 SFILNSIPV-VVTLVSFGVFVLL-----GGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEER 600 (1495)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc
Confidence 221111111 1111111111111 2345788888888999999999999999999999999999999999976654
Q ss_pred ccccCCCCCCCCCCCccEEEEEEEEEeCCC-CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Q 000522 1206 ELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD 1284 (1445)
Q Consensus 1206 ~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ID 1284 (1445)
..... + +..+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++|.+.
T Consensus 601 ~~~~~--~-~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~-- 675 (1495)
T PLN03232 601 ILAQN--P-PLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV-- 675 (1495)
T ss_pred ccccc--C-CcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE--
Confidence 21111 1 111234679999999999753 46799999999999999999999999999999999999999999763
Q ss_pred CeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhH
Q 000522 1285 GLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1362 (1445)
Q Consensus 1285 G~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQ 1362 (1445)
.+|++|+||||+|++|+|||||||.++.++++++++++++.|++.++++.+ |+||.|||+|.+|||||
T Consensus 676 ----------~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQ 745 (1495)
T PLN03232 676 ----------VIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQ 745 (1495)
T ss_pred ----------EecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHH
Confidence 468999999999999999999999999889999999999999999999988 99999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeccccCCCHHHHHHH-HHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASIL-QNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I-q~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|||||||||++++|+|+|||||||+||++|++.| ++.++...+++|+|+||||++++..||+|++|++|+|+|.|+|++
T Consensus 746 kQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~e 825 (1495)
T PLN03232 746 KQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAE 825 (1495)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHH
Confidence 9999999999999999999999999999999876 556777778999999999999999999999999999999999876
Q ss_pred C
Q 000522 1442 P 1442 (1445)
Q Consensus 1442 ~ 1442 (1445)
+
T Consensus 826 L 826 (1495)
T PLN03232 826 L 826 (1495)
T ss_pred H
Confidence 5
No 71
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=2.8e-60 Score=602.25 Aligned_cols=533 Identities=18% Similarity=0.214 Sum_probs=414.0
Q ss_pred HHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 273 ICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRS 352 (1445)
Q Consensus 273 l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~ 352 (1445)
.++.+++.++..+++.++..++..+.|++++.++|.+...... ..+++.+++..++..+......+...++..++|.
T Consensus 13 ~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (585)
T TIGR01192 13 YLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSDV---LPTLALWAGFGVFNTIAYVLVAREADRLAHGRRA 89 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778888888999999999999999999999977543211 1111122223333444444445667788888999
Q ss_pred HHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH---HHhhHhHHHHHHHHHHH
Q 000522 353 SIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY---LLYTQVKFAFVSGLAIT 428 (1445)
Q Consensus 353 ~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~---lL~~~lg~a~l~~~~~~ 428 (1445)
.+...+|+|.++++.....+.++|++++.++.|++.+..... .+..+....+.++++++ .+.+.+++.+++ ++
T Consensus 90 ~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~---~~ 166 (585)
T TIGR01192 90 TLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLMV---LG 166 (585)
T ss_pred HHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH
Confidence 999999999999999988888999999999999999986543 33344444444433322 233333333332 23
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 429 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW 508 (1445)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~ 508 (1445)
++...+..++.+++.+..++..+..++..+.+.|.++|+++||.+|.|+.+.+++++..++-.+...+..........+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (585)
T TIGR01192 167 ILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLN 246 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344456677777788888888889999999999999999999999998888877754433333222222222222221
Q ss_pred HHH--HHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhc
Q 000522 509 ATT--PTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAA 586 (1445)
Q Consensus 509 ~~~--~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~ 586 (1445)
... ...+.++.+|.|.+.++.++.+.+++.+.++..+..|+..+...+..+.++..+.+|+.++++.++..+....
T Consensus 247 ~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~-- 324 (585)
T TIGR01192 247 RMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPAD-- 324 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcc--
Confidence 111 1223456678888888899999999999999999999999999999999999999999999975432110000
Q ss_pred CCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCe
Q 000522 587 NSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHG 666 (1445)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G 666 (1445)
.+. .+.....++++|++|+|+.+ +++|+|+||++++||.++|+||||||||||+++|+|+++|++|
T Consensus 325 -~~~--------~~~~~~~i~~~~v~~~y~~~-----~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G 390 (585)
T TIGR01192 325 -APE--------LPNVKGAVEFRHITFEFANS-----SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVG 390 (585)
T ss_pred -CCC--------CCCCCCeEEEEEEEEECCCC-----CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCC
Confidence 000 01123469999999999632 2359999999999999999999999999999999999999999
Q ss_pred EEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000522 667 SIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1445)
Q Consensus 667 ~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~ 732 (1445)
+|.++| .++||+|+|++|++|++|||.++.+ .+++..+++++.+++++.+..+|+|.+|.+|++|.
T Consensus 391 ~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~ 470 (585)
T TIGR01192 391 QILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGN 470 (585)
T ss_pred EEEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCC
Confidence 999876 5899999999999999999999864 56777888999999999999999999999999999
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEE
Q 000522 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1445)
Q Consensus 733 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~ 812 (1445)
+||||||||++||||++++|++++||||||+||+++++.+.+. +.. ..+++|+|++||+++.++.||+|++|++|+++
T Consensus 471 ~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~-l~~-~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~ 548 (585)
T TIGR01192 471 RLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNA-IDA-LRKNRTTFIIAHRLSTVRNADLVLFLDQGRLI 548 (585)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHH-HHH-HhCCCEEEEEEcChHHHHcCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999998876 433 45689999999999999999999999999999
Q ss_pred EecCHhHHHhccccCcc
Q 000522 813 WIGSSADLAVSLYSGFW 829 (1445)
Q Consensus 813 ~~g~~~~~~~~~~~~~~ 829 (1445)
+.|+++++.++.+.+.+
T Consensus 549 ~~g~~~~l~~~~~~y~~ 565 (585)
T TIGR01192 549 EKGSFQELIQKDGRFYK 565 (585)
T ss_pred EECCHHHHHHCCChHHH
Confidence 99999999876655443
No 72
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.4e-61 Score=648.04 Aligned_cols=217 Identities=21% Similarity=0.318 Sum_probs=183.0
Q ss_pred CccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcc
Q 000522 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1299 (1445)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1299 (1445)
...|+++|++++|+....++|+|+||+|++||++||+|++|||||||+++|.|+.+|++|+|.++|.++.+ +....|++
T Consensus 1935 ~~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~ 2013 (2272)
T TIGR01257 1935 TDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQN 2013 (2272)
T ss_pred CceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhh
Confidence 34699999999997533579999999999999999999999999999999999999999999999999965 45678899
Q ss_pred eEEEcCCCcccCc-cHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000522 1300 FAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1445)
Q Consensus 1300 i~~VpQdp~lF~g-TIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1445)
|||+||++.+++. |+||||..+. ..+++++.+. ..+.++.+||+...+.....||||||||+++||||+.+
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~-----v~~lLe~lgL~~~~dk~~~~LSGGqKqRLslA~ALi~~ 2088 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKV-----ANWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGC 2088 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcCCHHHhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999998875 9999996532 1222222211 12233334555445555567999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHh-CCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1376 SKVLCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~-~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|+||+|||||++||+.+.+.+.+.|++. .+|+|||++||+++.+.. ||||++|++|++++.|+|+++
T Consensus 2089 P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~L 2157 (2272)
T TIGR01257 2089 PPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHL 2157 (2272)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999885 358999999999999875 899999999999999998765
No 73
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-63 Score=618.45 Aligned_cols=438 Identities=21% Similarity=0.294 Sum_probs=332.8
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|.. ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~------~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~ 77 (501)
T PRK11288 4 YLSFDGIGKTFPG------VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAAL 77 (501)
T ss_pred eEEEeeeEEEECC------EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHH
Confidence 4789999999852 2359999999999999999999999999999999999999999998865
Q ss_pred --eEEEEcCCCCCCCc-cHHHHHhcCCC------CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000522 673 --SIAYVPQVPWILSG-TIRDNILFGKN------YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1445)
Q Consensus 673 --~i~y~~Q~p~l~~~-ti~~nI~~g~~------~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQk 739 (1445)
.|+|++|+|.++.. |++||+.++.. .+. ++..++++.+++... ......+||||||
T Consensus 78 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgGq~ 146 (501)
T PRK11288 78 AAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDID-----------PDTPLKYLSIGQR 146 (501)
T ss_pred hCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCC-----------cCCchhhCCHHHH
Confidence 38999999988875 99999998631 121 234445555554321 2345568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHh
Q 000522 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 818 (1445)
Q Consensus 740 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~ 818 (1445)
||++||||++.+|+++||||||++||+.+.+.+.+.+ .....+|+|+|++||+++.+.. ||+|++|++|+++..++..
T Consensus 147 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l-~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 225 (501)
T PRK11288 147 QMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVI-RELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDM 225 (501)
T ss_pred HHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHH-HHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCcc
Confidence 9999999999999999999999999999999888763 2212347899999999998865 9999999999987433200
Q ss_pred HHHhccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcCccchhhHHHHHhhhhH
Q 000522 819 DLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGW 898 (1445)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~ 898 (1445)
+ . . . .+. +.
T Consensus 226 ~-------------~---------------------------~-------~------~~~-------------~~----- 234 (501)
T PRK11288 226 A-------------Q---------------------------V-------D------RDQ-------------LV----- 234 (501)
T ss_pred c-------------c---------------------------C-------C------HHH-------------HH-----
Confidence 0 0 0 0 000 00
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 899 FITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTL 978 (1445)
Q Consensus 899 ~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~l 978 (1445)
..+..
T Consensus 235 ------------------------~~~~~--------------------------------------------------- 239 (501)
T PRK11288 235 ------------------------QAMVG--------------------------------------------------- 239 (501)
T ss_pred ------------------------HHhcC---------------------------------------------------
Confidence 00000
Q ss_pred HHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 979 LTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFF 1058 (1445)
Q Consensus 979 l~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~ 1058 (1445)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T PRK11288 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 000522 1059 YRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIIS 1138 (1445)
Q Consensus 1059 y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~ 1138 (1445)
+
T Consensus 240 ---------------~---------------------------------------------------------------- 240 (501)
T PRK11288 240 ---------------R---------------------------------------------------------------- 240 (501)
T ss_pred ---------------C----------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCC
Q 000522 1139 FIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWP 1218 (1445)
Q Consensus 1139 ~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp 1218 (1445)
.. .. . ...++. + +
T Consensus 241 ------------~~-~~----------------------------------------~---~~~~~~--------~---~ 253 (501)
T PRK11288 241 ------------EI-GD----------------------------------------I---YGYRPR--------P---L 253 (501)
T ss_pred ------------Cc-cc----------------------------------------c---cccccc--------C---C
Confidence 00 00 0 000000 0 0
Q ss_pred CCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCC-hHhhh
Q 000522 1219 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDLR 1297 (1445)
Q Consensus 1219 ~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~~lR 1297 (1445)
....++++|++++ .+++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .+..|
T Consensus 254 ~~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 327 (501)
T PRK11288 254 GEVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDIRSPRDAIR 327 (501)
T ss_pred CCcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCCCCHHHHHh
Confidence 1125889999742 4899999999999999999999999999999999999999999999999987543 34567
Q ss_pred cceEEEcCCCc---ccC-ccHHHhcCCCCC-C--------ChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHH
Q 000522 1298 GRFAVVPQSPF---LFE-GSLRDNLDPFHM-N--------DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQR 1363 (1445)
Q Consensus 1298 ~~i~~VpQdp~---lF~-gTIReNLdp~~~-~--------sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQr 1363 (1445)
++++|+||+|. +|+ .|+.+|+..... . ...+ ++....+.++.+|++ ........+||||||
T Consensus 328 ~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~~LSgGq~ 402 (501)
T PRK11288 328 AGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRW-----EAENADRFIRSLNIKTPSREQLIMNLSGGNQ 402 (501)
T ss_pred CCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHH-----HHHHHHHHHHhcCcccCCccCccccCCHHHH
Confidence 89999999973 554 699999864311 0 1100 011123344445663 334555668999999
Q ss_pred HHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1364 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1364 Qrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||++||||++.+|++|||||||++||..+.+.+.+.|++.. .+.|||+|||+++.+.. ||+|++|++|++++.|++.+
T Consensus 403 qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g~i~~~~~~~~ 482 (501)
T PRK11288 403 QKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREGRIAGELAREQ 482 (501)
T ss_pred HHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECCEEEEEEcccc
Confidence 99999999999999999999999999999999999997754 48899999999999865 79999999999999999877
Q ss_pred CC
Q 000522 1442 PN 1443 (1445)
Q Consensus 1442 ~~ 1443 (1445)
.+
T Consensus 483 ~~ 484 (501)
T PRK11288 483 AT 484 (501)
T ss_pred CC
Confidence 53
No 74
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.1e-61 Score=660.33 Aligned_cols=456 Identities=20% Similarity=0.212 Sum_probs=351.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHH
Q 000522 964 AFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLL 1043 (1445)
Q Consensus 964 ~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~ 1043 (1445)
...+.+....+...+++++++.|..++++.++|+++|++++|++.+++.... +..+....+.++..++++.....+..+
T Consensus 366 ~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~~~-l~~l~~~pl~ii~~~~lL~~~lg~~~l 444 (1622)
T PLN03130 366 MRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQICQQ-LHTLWSAPFRIIIAMVLLYQQLGVASL 444 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777888999999999999999999999999999999999987643 333333333333333333322222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000522 1044 LLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASL 1123 (1445)
Q Consensus 1044 ~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1123 (1445)
+.++++++...++.++.+..+..++.....+....+.+.|.++|+++||+|+||+.|.+++.+..+...+..........
T Consensus 445 ~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~ 524 (1622)
T PLN03130 445 IGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSA 524 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222223333333333333444444445556677899999999999999999999999998876665444333322222
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 000522 1124 WLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVP 1203 (1445)
Q Consensus 1124 wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~ 1203 (1445)
+.......... ++.++.+...... .+..++|.+..++++...+..++..+...+.++..+.+|.+|+.++++.+
T Consensus 525 ~~~~~~~~~~~-~v~~~~fg~~~~~-----~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~ 598 (1622)
T PLN03130 525 FNSFILNSIPV-LVTVVSFGVFTLL-----GGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAE 598 (1622)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 22221111111 1111111111111 23467888888888888888899999999999999999999999999765
Q ss_pred ccccccCCCCCCCCCCCccEEEEEEEEEeCCC-CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCC-cEE
Q 000522 1204 QEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG-GQI 1281 (1445)
Q Consensus 1204 ~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~-G~I 1281 (1445)
++..... ++ .-+..+.|+|+|++|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|.+ |+|
T Consensus 599 e~~~~~~--~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I 675 (1622)
T PLN03130 599 ERVLLPN--PP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASV 675 (1622)
T ss_pred ccccccC--Cc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceE
Confidence 4321111 11 11224579999999999753 3579999999999999999999999999999999999999999 999
Q ss_pred EECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCC
Q 000522 1282 LVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFS 1359 (1445)
Q Consensus 1282 ~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LS 1359 (1445)
.+ |++|+||||+|++|+|||||||.++.++++++++++++.|+|.++++.+ |++|.+||+|.+||
T Consensus 676 ~l-------------~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LS 742 (1622)
T PLN03130 676 VI-------------RGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNIS 742 (1622)
T ss_pred EE-------------cCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCC
Confidence 74 7799999999999999999999999889999999999999999999999 99999999999999
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHH-HHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecC
Q 000522 1360 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASIL-QNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGC 1438 (1445)
Q Consensus 1360 gGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~I-q~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~ 1438 (1445)
|||||||+||||++++|+|+|||||||+||+++++.| ++.++...+++|+|+||||++.+..||+|++|++|+|+|.|+
T Consensus 743 GGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt 822 (1622)
T PLN03130 743 GGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGT 822 (1622)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCC
Confidence 9999999999999999999999999999999999866 567887778999999999999999999999999999999999
Q ss_pred CCCC
Q 000522 1439 AAAP 1442 (1445)
Q Consensus 1439 p~~~ 1442 (1445)
|+++
T Consensus 823 ~~eL 826 (1622)
T PLN03130 823 YEEL 826 (1622)
T ss_pred HHHH
Confidence 8765
No 75
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-62 Score=610.67 Aligned_cols=198 Identities=19% Similarity=0.287 Sum_probs=166.2
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
..++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| ++++
T Consensus 318 ~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 384 (530)
T PRK15064 318 NALEVENLTKGFDN--GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANI 384 (530)
T ss_pred ceEEEEeeEEeeCC--ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEE
Confidence 36999999999964 3699999999999999999999999999999999999999999999987 3579
Q ss_pred EEEcCCCc--ccC-ccHHHhcCCCC--CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000522 1301 AVVPQSPF--LFE-GSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1445)
Q Consensus 1301 ~~VpQdp~--lF~-gTIReNLdp~~--~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1445)
+|+||++. +++ .|+++|+..+. ...++++.++|+..++. .........+||||||||++||||++++
T Consensus 385 ~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~--------~~~~~~~~~~LSgGq~qrv~la~al~~~ 456 (530)
T PRK15064 385 GYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFS--------QDDIKKSVKVLSGGEKGRMLFGKLMMQK 456 (530)
T ss_pred EEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCC--------hhHhcCcccccCHHHHHHHHHHHHHhcC
Confidence 99999984 443 59999986432 12233455555554431 1234455668999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEe-eecCCCC
Q 000522 1376 SKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLP-HCGCAAA 1441 (1445)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vv-E~G~p~~ 1441 (1445)
|+||||||||++||+.+.+.+.+.|++. +.|||+|||+++.+.. ||+|++|++|+++ +.|++.+
T Consensus 457 p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~ 522 (530)
T PRK15064 457 PNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEE 522 (530)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHH
Confidence 9999999999999999999999999876 4699999999999876 8999999999998 6777643
No 76
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=1.6e-60 Score=601.58 Aligned_cols=462 Identities=18% Similarity=0.231 Sum_probs=347.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhh
Q 000522 953 SFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAV 1032 (1445)
Q Consensus 953 ~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~ 1032 (1445)
.++.++..+.....+.+...+++.++++++++.|++||++.++|++++|+++|++.+...+. .+..++..++.+++.++
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~ 140 (547)
T PRK10522 62 MAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAA 140 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 44556677777888999999999999999999999999999999999999999999987554 35556666667777777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcH---HHHHHHHHHHHH
Q 000522 1033 VLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSE---DYFMAKFKEHVV 1109 (1445)
Q Consensus 1033 ~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e---~~f~~~~~~~~d 1109 (1445)
++++.+|.++++++..+.+...+..+..+..+...+...+..+.+.+++.|.++|+++++ ++.+ +.+.+++.+..+
T Consensus 141 ~l~~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~ 219 (547)
T PRK10522 141 YLAWLSPKMLLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQ 219 (547)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHH
Confidence 777777777665544444333333333333333333334566778899999999999995 5443 456777777666
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHH-HHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 1110 LYQRTSYSELTASLWLSLRLQLLAAFI-ISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEK 1188 (1445)
Q Consensus 1110 ~~~~~~~~~~~~~~wl~~~l~~l~~~~-~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~ 1188 (1445)
...+..+...... .....+..++ ..+.++..+.+.. . ...+.+.++....+...+..++..+...+.++..
T Consensus 220 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~ 291 (547)
T PRK10522 220 EYRHHIIRADTFH----LSAVNWSNIMMLGAIGLVFYMANS--L--GWADTNVAATYSLTLLFLRTPLLSAVGALPTLLS 291 (547)
T ss_pred HHHhhhHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH--h--hcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6655444322111 1111111111 1111111111110 0 1112333333334444566788899999999999
Q ss_pred HHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHH
Q 000522 1189 EMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILN 1268 (1445)
Q Consensus 1189 ~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~ 1268 (1445)
...+.+|+.++.+.++|+......+ -|..+.|+|+||+|+|++ .+++|+|+||+|+|||++||+|+||||||||++
T Consensus 292 ~~~a~~ri~~l~~~~~~~~~~~~~~---~~~~~~i~~~~v~f~y~~-~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ 367 (547)
T PRK10522 292 AQVAFNKLNKLALAPYKAEFPRPQA---FPDWQTLELRNVTFAYQD-NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAM 367 (547)
T ss_pred HHHHHHHHHHHhccccccccccccc---cCcCceEEEEEEEEEeCC-CCeEEecceEEEcCCCEEEEECCCCCCHHHHHH
Confidence 9999999999976554321111111 122357999999999974 357999999999999999999999999999999
Q ss_pred HHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCc
Q 000522 1269 ALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLE 1348 (1445)
Q Consensus 1269 ~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLd 1348 (1445)
+|.|+|+|++|+|.+||+|+++++.+++|+++++|||||.+|+||+++| ....+|++++++++++++.+.+.
T Consensus 368 ll~g~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~----- 439 (547)
T PRK10522 368 LLTGLYQPQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLE----- 439 (547)
T ss_pred HHhCCCCCCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhh-----
Confidence 9999999999999999999999999999999999999999999999999 23567788888888877655443
Q ss_pred hhhhc---CCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhhcC
Q 000522 1349 TFVKE---SGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMD 1423 (1445)
Q Consensus 1349 t~v~e---~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~D 1423 (1445)
.++ +|.+||||||||++||||++++|+|||||||||+||+++++.+.+.+.+.. +++|+|+||||++++..||
T Consensus 440 --~~~~~~~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d 517 (547)
T PRK10522 440 --LEDGRISNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHAD 517 (547)
T ss_pred --ccccCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCC
Confidence 222 378999999999999999999999999999999999999999999987654 4899999999999999999
Q ss_pred EEEEEeCCeEeeecC
Q 000522 1424 EILILDHGHLPHCGC 1438 (1445)
Q Consensus 1424 rI~Vl~~G~vvE~G~ 1438 (1445)
+|++|++|+++|...
T Consensus 518 ~i~~l~~G~i~e~~~ 532 (547)
T PRK10522 518 RLLEMRNGQLSELTG 532 (547)
T ss_pred EEEEEECCEEEEecC
Confidence 999999999999843
No 77
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-62 Score=611.54 Aligned_cols=434 Identities=22% Similarity=0.315 Sum_probs=327.1
Q ss_pred EccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------eE
Q 000522 609 QDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------------SI 674 (1445)
Q Consensus 609 ~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------------~i 674 (1445)
+|+++.|.. +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 2 ~nl~~~~~~------~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 75 (491)
T PRK10982 2 SNISKSFPG------VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGI 75 (491)
T ss_pred CceEEEeCC------EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 467777742 2359999999999999999999999999999999999999999999876 38
Q ss_pred EEEcCCCCCCC-ccHHHHHhcCCC------CChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHH
Q 000522 675 AYVPQVPWILS-GTIRDNILFGKN------YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1445)
Q Consensus 675 ~y~~Q~p~l~~-~ti~~nI~~g~~------~~~~----~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~ 743 (1445)
+|++|++.++. .|++||+.++.. .+.+ +.+++++.+++. ........+|||||||||+
T Consensus 76 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgGq~qrv~ 144 (491)
T PRK10982 76 SMVHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDID-----------IDPRAKVATLSVSQMQMIE 144 (491)
T ss_pred EEEecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCC-----------CCccCchhhCCHHHHHHHH
Confidence 99999998765 599999987631 1221 223333333332 1224456789999999999
Q ss_pred HHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHHh
Q 000522 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 744 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
||||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 145 lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 223 (491)
T PRK10982 145 IAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTI-IRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTM 223 (491)
T ss_pred HHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCH
Confidence 99999999999999999999999999998876 33212357899999999998865 99999999999987665322100
Q ss_pred ccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcCccchhhHHHHHhhhhHHHHH
Q 000522 823 SLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFITL 902 (1445)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~~ 902 (1445)
.+.
T Consensus 224 -----------------------------------------------------~~~------------------------ 226 (491)
T PRK10982 224 -----------------------------------------------------DKI------------------------ 226 (491)
T ss_pred -----------------------------------------------------HHH------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 903 VICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKI 982 (1445)
Q Consensus 903 ~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~l 982 (1445)
...+..
T Consensus 227 -------------------~~~~~~------------------------------------------------------- 232 (491)
T PRK10982 227 -------------------IAMMVG------------------------------------------------------- 232 (491)
T ss_pred -------------------HHHHhC-------------------------------------------------------
Confidence 000000
Q ss_pred hcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 983 VNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRST 1062 (1445)
Q Consensus 983 l~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~ 1062 (1445)
T Consensus 233 -------------------------------------------------------------------------------- 232 (491)
T PRK10982 233 -------------------------------------------------------------------------------- 232 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 000522 1063 SRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIAT 1142 (1445)
Q Consensus 1063 sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~ 1142 (1445)
+
T Consensus 233 -----------~-------------------------------------------------------------------- 233 (491)
T PRK10982 233 -----------R-------------------------------------------------------------------- 233 (491)
T ss_pred -----------C--------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCcc
Q 000522 1143 MAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGL 1222 (1445)
Q Consensus 1143 ~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~ 1222 (1445)
. .. + ..+.+. .+ +.+..
T Consensus 234 --------~--~~---------------------------------------~-----~~~~~~-----~~----~~~~~ 250 (491)
T PRK10982 234 --------S--LT---------------------------------------Q-----RFPDKE-----NK----PGEVI 250 (491)
T ss_pred --------C--cc---------------------------------------c-----cccccc-----CC----CCCcE
Confidence 0 00 0 000000 00 11125
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChH-hhhcceE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR-DLRGRFA 1301 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~-~lR~~i~ 1301 (1445)
|+++|++++| +++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+.. .+|+.++
T Consensus 251 i~~~~l~~~~----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~ 326 (491)
T PRK10982 251 LEVRNLTSLR----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNANEAINHGFA 326 (491)
T ss_pred EEEeCccccc----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCHHHHHHCCCE
Confidence 8999999975 2599999999999999999999999999999999999999999999999999876654 4577899
Q ss_pred EEcCCCc---ccC-ccHHHh-----cCCCCC----CChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHH
Q 000522 1302 VVPQSPF---LFE-GSLRDN-----LDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLIC 1367 (1445)
Q Consensus 1302 ~VpQdp~---lF~-gTIReN-----Ldp~~~----~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~ 1367 (1445)
|+||++. +|+ .|+++| +..... .+..+.. ....+.++.+|+. ........+||||||||++
T Consensus 327 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~ 401 (491)
T PRK10982 327 LVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMK-----SDTQWVIDSMRVKTPGHRTQIGSLSGGNQQKVI 401 (491)
T ss_pred EcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHH-----HHHHHHHHhcCccCCCcccccccCCcHHHHHHH
Confidence 9999963 565 477766 321111 1111111 1123344444553 2345556689999999999
Q ss_pred HHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||++++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||||++|++|+++..+++++.
T Consensus 402 la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 478 (491)
T PRK10982 402 IGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVAGIVDTKTT 478 (491)
T ss_pred HHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEEEEEccccC
Confidence 9999999999999999999999999999999997653 58999999999998875 799999999999998887543
No 78
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=5.6e-62 Score=607.70 Aligned_cols=444 Identities=19% Similarity=0.240 Sum_probs=330.4
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|.. ..+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~ 76 (490)
T PRK10938 3 SLQISQGTFRLSD------TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQ 76 (490)
T ss_pred eEEEEeEEEEcCC------eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHH
Confidence 3789999999852 1259999999999999999999999999999999999999999998764
Q ss_pred -eEEEEcCCCCC---------CCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000522 673 -SIAYVPQVPWI---------LSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1445)
Q Consensus 673 -~i~y~~Q~p~l---------~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv 742 (1445)
.++|++|+|.+ ++.|++||+.++.. ++++.+++++..++.... .....+||||||||+
T Consensus 77 ~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv 144 (490)
T PRK10938 77 KLVSDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITALL-----------DRRFKYLSTGETRKT 144 (490)
T ss_pred HHhceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhhh-----------hCCcccCCHHHHHHH
Confidence 27999998753 14599999876532 345566777777765332 334568999999999
Q ss_pred HHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHH
Q 000522 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1445)
Q Consensus 743 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~ 821 (1445)
+||||+..+|++++|||||++||+...+.+.+.+ .....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++.
T Consensus 145 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l-~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 223 (490)
T PRK10938 145 LLCQALMSEPDLLILDEPFDGLDVASRQQLAELL-ASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEIL 223 (490)
T ss_pred HHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHH-HHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999888863 3212347899999999998876 9999999999999877655432
Q ss_pred hccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcCccchhhHHHHHhhhhHHHH
Q 000522 822 VSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSGWFIT 901 (1445)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g~~~~ 901 (1445)
... .. .+..+.
T Consensus 224 ~~~------------------------------------------------~~---~~~~~~------------------ 234 (490)
T PRK10938 224 QQA------------------------------------------------LV---AQLAHS------------------ 234 (490)
T ss_pred cch------------------------------------------------hh---hhhhhh------------------
Confidence 100 00 000000
Q ss_pred HHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 902 LVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTK 981 (1445)
Q Consensus 902 ~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ 981 (1445)
.
T Consensus 235 -------------------------~------------------------------------------------------ 235 (490)
T PRK10938 235 -------------------------E------------------------------------------------------ 235 (490)
T ss_pred -------------------------h------------------------------------------------------
Confidence 0
Q ss_pred HhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 982 IVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRS 1061 (1445)
Q Consensus 982 ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~ 1061 (1445)
T Consensus 236 -------------------------------------------------------------------------------- 235 (490)
T PRK10938 236 -------------------------------------------------------------------------------- 235 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 000522 1062 TSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIA 1141 (1445)
Q Consensus 1062 ~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~ 1141 (1445)
.+. . .
T Consensus 236 ---~~~---~-~-------------------------------------------------------------------- 240 (490)
T PRK10938 236 ---QLE---G-V-------------------------------------------------------------------- 240 (490)
T ss_pred ---ccC---c-c--------------------------------------------------------------------
Confidence 000 0 0
Q ss_pred HHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCc
Q 000522 1142 TMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQG 1221 (1445)
Q Consensus 1142 ~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g 1221 (1445)
..... .+.... ...+ +...
T Consensus 241 ---------~~~~~------------------------------------------------~~~~~~-~~~~---~~~~ 259 (490)
T PRK10938 241 ---------QLPEP------------------------------------------------DEPSAR-HALP---ANEP 259 (490)
T ss_pred ---------ccCcc------------------------------------------------cccccc-cccC---CCCc
Confidence 00000 000000 0000 0122
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-CCcEEEECCeeCCC-CChHhhhcc
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-CGGQILVDGLNIIN-TPVRDLRGR 1299 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-~~G~I~IDG~di~~-i~~~~lR~~ 1299 (1445)
.++++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+.++ ++|+|.+||.++.. .+....|++
T Consensus 260 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 337 (490)
T PRK10938 260 RIVLNNGVVSYND--RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRRRGSGETIWDIKKH 337 (490)
T ss_pred eEEEeceEEEECC--eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecccCCCCCCHHHHHhh
Confidence 5999999999964 3599999999999999999999999999999999998876 69999999987632 233456889
Q ss_pred eEEEcCCCcccC---ccHHHhcCCC--C---CC--ChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHH
Q 000522 1300 FAVVPQSPFLFE---GSLRDNLDPF--H---MN--DDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICL 1368 (1445)
Q Consensus 1300 i~~VpQdp~lF~---gTIReNLdp~--~---~~--sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~L 1368 (1445)
++++||++.++. .|+++++.+. . .. .+.+.. ....+.++.+|++. ........||||||||++|
T Consensus 338 i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~LSgGq~qrv~l 412 (490)
T PRK10938 338 IGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQ-----KLAQQWLDILGIDKRTADAPFHSLSWGQQRLALI 412 (490)
T ss_pred ceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHH-----HHHHHHHHHcCCchhhccCchhhCCHHHHHHHHH
Confidence 999999986542 3677776421 1 01 011100 01223333446654 4455556899999999999
Q ss_pred HHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CC-cEEEEeccChhHHhh--cCEEEEEeCCeEeeecC
Q 000522 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KG-MTVITIAHRISTVLN--MDEILILDHGHLPHCGC 1438 (1445)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~-~TvI~IaHrl~ti~~--~DrI~Vl~~G~vvE~G~ 1438 (1445)
|||++++|+||||||||++||+++.+.+.+.|++.. ++ .|||+|||+++.+.. ||+|++|++|++++.-+
T Consensus 413 a~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~~l~~G~i~~~~~ 486 (490)
T PRK10938 413 VRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLEFVPDGDIYRYVQ 486 (490)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEEEecCCceEEeec
Confidence 999999999999999999999999999999998864 33 479999999999975 69999999999987643
No 79
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3e-60 Score=598.53 Aligned_cols=195 Identities=23% Similarity=0.273 Sum_probs=160.4
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
..++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ + .++
T Consensus 323 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~----------~~i 389 (556)
T PRK11819 323 KVIEAENLSKSFGD--RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-T----------VKL 389 (556)
T ss_pred eEEEEEeEEEEECC--eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-c----------eEE
Confidence 46999999999964 3699999999999999999999999999999999999999999999954 2 169
Q ss_pred EEEcCCC-cccCc-cHHHhcCCCCCC-----ChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHh
Q 000522 1301 AVVPQSP-FLFEG-SLRDNLDPFHMN-----DDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1301 ~~VpQdp-~lF~g-TIReNLdp~~~~-----sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
+|+||++ .++.. |+++|+...... .+.+..+ .++.+|+.. ........||||||||++||||+
T Consensus 390 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~---------~l~~~~l~~~~~~~~~~~LSgG~~qrv~la~al 460 (556)
T PRK11819 390 AYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRA---------YVGRFNFKGGDQQKKVGVLSGGERNRLHLAKTL 460 (556)
T ss_pred EEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHH---------HHHhCCCChhHhcCchhhCCHHHHHHHHHHHHH
Confidence 9999997 56654 999998643211 1122222 333445543 23455568999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeC-CeEee-ecCC
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-GHLPH-CGCA 1439 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~-G~vvE-~G~p 1439 (1445)
+.+|++|||||||++||+.+.+.+.+.|++. + .|||+|||+++.+.. ||+|++|++ |++.+ .|++
T Consensus 461 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~ 528 (556)
T PRK11819 461 KQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNF 528 (556)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCH
Confidence 9999999999999999999999999999875 4 499999999998876 899999996 88875 4443
No 80
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=6.5e-60 Score=595.51 Aligned_cols=469 Identities=23% Similarity=0.289 Sum_probs=326.0
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--eEEEEcCCCC
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPW 682 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~p~ 682 (1445)
.++++|++++|..+ +++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.+++ .||||+|+|+
T Consensus 4 ~i~~~nls~~~~~~-----~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~ 78 (552)
T TIGR03719 4 IYTMNRVSKVVPPK-----KEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQ 78 (552)
T ss_pred EEEEeeEEEecCCC-----CeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCC
Confidence 57899999998521 2359999999999999999999999999999999999999999999874 6999999999
Q ss_pred CCC-ccHHHHHhcCCCC------------------Ch---------hhHHHHHHHhcchH---H----HhhccCCCcccc
Q 000522 683 ILS-GTIRDNILFGKNY------------------DP---------QSYSETLKACTLDV---D----ISLMVGGDMAYI 727 (1445)
Q Consensus 683 l~~-~ti~~nI~~g~~~------------------~~---------~~~~~v~~~~~l~~---d----~~~~~~gd~t~v 727 (1445)
+++ .|++|||.++... ++ +++.++++.++... . ++.+ |.. ..
T Consensus 79 ~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~-~~ 155 (552)
T TIGR03719 79 LDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL--RCP-PW 155 (552)
T ss_pred CCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC--CCC-cc
Confidence 875 5999999875210 01 12344445554321 1 1111 111 12
Q ss_pred cCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEE
Q 000522 728 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVM 806 (1445)
Q Consensus 728 g~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l 806 (1445)
.....+|||||||||+||||++.+|+++||||||++||+.+.+++.+. +.. . +.|+|+|||+++.+.. ||++++|
T Consensus 156 ~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~-L~~-~--~~tvIiisHd~~~~~~~~d~v~~l 231 (552)
T TIGR03719 156 DADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQH-LQE-Y--PGTVVAVTHDRYFLDNVAGWILEL 231 (552)
T ss_pred cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHH-HHh-C--CCeEEEEeCCHHHHHhhcCeEEEE
Confidence 456779999999999999999999999999999999999999988876 332 2 3599999999999876 9999999
Q ss_pred eCCEEE-EecCHhHHHhccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcCccc
Q 000522 807 DKGQVK-WIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVE 885 (1445)
Q Consensus 807 ~~G~i~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~ 885 (1445)
++|+++ ..|+++++..... .. .+ ....+.+..+.
T Consensus 232 ~~g~i~~~~g~~~~~~~~~~-----------------~~---------~~---------------~~~~~~~~~~~---- 266 (552)
T TIGR03719 232 DRGRGIPWEGNYSSWLEQKE-----------------KR---------LE---------------QEEKEESARQK---- 266 (552)
T ss_pred ECCEEEEecCCHHHHHHHHH-----------------HH---------HH---------------HHHHHHHHHHH----
Confidence 999975 6788877643100 00 00 00000000000
Q ss_pred hhhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 886 LTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 965 (1445)
Q Consensus 886 ~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~ 965 (1445)
.+.. ...|....
T Consensus 267 ------~~~~--------------------------~~~~~~~~------------------------------------ 278 (552)
T TIGR03719 267 ------ALKR--------------------------ELEWVRSS------------------------------------ 278 (552)
T ss_pred ------HHHH--------------------------HHHHHHhh------------------------------------
Confidence 0000 00000000
Q ss_pred HHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHH
Q 000522 966 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1045 (1445)
Q Consensus 966 ~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1045 (1445)
+
T Consensus 279 --------------------~----------------------------------------------------------- 279 (552)
T TIGR03719 279 --------------------P----------------------------------------------------------- 279 (552)
T ss_pred --------------------h-----------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 000522 1046 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1125 (1445)
Q Consensus 1046 ~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl 1125 (1445)
.. + + + +....
T Consensus 280 ---------------~~-~---~----~-----------------------------~~~~~------------------ 289 (552)
T TIGR03719 280 ---------------KA-R---Q----A-----------------------------KSKAR------------------ 289 (552)
T ss_pred ---------------hh-H---H----H-----------------------------HHHHH------------------
Confidence 00 0 0 0 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCc
Q 000522 1126 SLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY-MDVPQ 1204 (1445)
Q Consensus 1126 ~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~-~~~~~ 1204 (1445)
....++..+. ...++
T Consensus 290 ----------------------------------------------------------------~~~~~~~~~~~~~~~~ 305 (552)
T TIGR03719 290 ----------------------------------------------------------------LARYEELLSQEFQKRN 305 (552)
T ss_pred ----------------------------------------------------------------HHHHHhhhhhcccccC
Confidence 0000000000 00000
Q ss_pred cccccCCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Q 000522 1205 EELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD 1284 (1445)
Q Consensus 1205 e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ID 1284 (1445)
+... ...+...-+.+..++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++
T Consensus 306 ~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~ 382 (552)
T TIGR03719 306 ETAE-IYIPPGPRLGDKVIEAENLSKGFGD--KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIG 382 (552)
T ss_pred CCce-eecCCCCCCCCeEEEEeeEEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEEC
Confidence 0000 0000000011236999999999964 369999999999999999999999999999999999999999999995
Q ss_pred CeeCCCCChHhhhcceEEEcCCCc-ccC-ccHHHhcCCCCC---CC--hHHHHHHHHHccHHHHHHhCCCch-hhhcCCC
Q 000522 1285 GLNIINTPVRDLRGRFAVVPQSPF-LFE-GSLRDNLDPFHM---ND--DLKIWSVLEKCHVKEEVEAVGLET-FVKESGI 1356 (1445)
Q Consensus 1285 G~di~~i~~~~lR~~i~~VpQdp~-lF~-gTIReNLdp~~~---~s--d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~ 1356 (1445)
+ + .+++|+||++. +++ -|+++|+..... .. +.+.. +.++.+|++. .......
T Consensus 383 ~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~---------~~l~~~~l~~~~~~~~~~ 442 (552)
T TIGR03719 383 E-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSR---------AYVGRFNFKGSDQQKKVG 442 (552)
T ss_pred C-c----------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHH---------HHHHhCCCChhHhcCchh
Confidence 4 2 16999999973 665 499999965321 11 11222 2344446643 2355556
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeC-CeEe
Q 000522 1357 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-GHLP 1434 (1445)
Q Consensus 1357 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~-G~vv 1434 (1445)
.||||||||++||||++.+|++|||||||++||+.+.+.+.+.|++. . .|||+|||+++.+.. ||+|++|++ |++.
T Consensus 443 ~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~d~i~~l~~~~~~~ 520 (552)
T TIGR03719 443 QLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GCAVVISHDRWFLDRIATHILAFEGDSHVE 520 (552)
T ss_pred hCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhCCEEEEEECCCeEE
Confidence 89999999999999999999999999999999999999999999976 3 499999999999876 899999997 6887
Q ss_pred ee
Q 000522 1435 HC 1436 (1445)
Q Consensus 1435 E~ 1436 (1445)
++
T Consensus 521 ~~ 522 (552)
T TIGR03719 521 WF 522 (552)
T ss_pred Ee
Confidence 54
No 81
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.6e-58 Score=635.44 Aligned_cols=545 Identities=19% Similarity=0.179 Sum_probs=398.5
Q ss_pred hHHHHHHHHHhHhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 268 SLVRAICCAYGYPYIC-LGLLKVVNDSIGFAGPLLLNKLIKFLQ-QGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSK 345 (1445)
Q Consensus 268 ~l~~~l~~~~~~~~~~-~~l~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r 345 (1445)
+.++..+++.++.... .+++.++..++....|+.++...+.-. +.......+. .+.+++..++..++.....+....
T Consensus 953 ~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~-~~iy~~l~i~~~~~~~~~~~~~~~ 1031 (1522)
T TIGR00957 953 SVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLR-LSVYGALGILQGFAVFGYSMAVSI 1031 (1522)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555443322 233444555666777888876654321 1111111221 112223333344443334455566
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHhHHHHHHH
Q 000522 346 LKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSG 424 (1445)
Q Consensus 346 ~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~ 424 (1445)
.+.+.-..+...+|++.++.+...+++.+.|+++|.++.|++.+..... .+..+...++.++.++.++.....+.+++.
T Consensus 1032 ~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~ 1111 (1522)
T TIGR00957 1032 GGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVII 1111 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7778888888899999999999999999999999999999999998654 445555666666555544443333333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 425 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 504 (1445)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 504 (1445)
++++++...+..+..+..+..++...+.+....+..+|.++|+++||.||+|+.|.++..+..+...+..........+.
T Consensus 1112 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 1191 (1522)
T TIGR00957 1112 PPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWL 1191 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233333334444444445555556667777899999999999999999999998887776554444433322223332
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhh
Q 000522 505 VFFWATTPTLFSLFTFGLFAL-MGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 583 (1445)
Q Consensus 505 ~~~~~~~~~~~~~~~f~~~~~-~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~ 583 (1445)
.........+ .++..+.+.+ ..+.++++.+..++.+...+..|+..+...+..+..+.+|.+||.+|++.++..+...
T Consensus 1192 ~~~~~~~~~~-~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~ 1270 (1522)
T TIGR00957 1192 AVRLECVGNC-IVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQI 1270 (1522)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccc
Confidence 2221111111 1222233333 3467999999999999999999999999999999999999999999997654321100
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccC
Q 000522 584 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 663 (1445)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~ 663 (1445)
. ...+.. .-+.++.|+++|++|+|+++. +++|+|+||+|++||.++|||++|||||||+++|+|.++|
T Consensus 1271 ~-~~~~~~-------~wp~~g~I~f~nVsf~Y~~~~----~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~ 1338 (1522)
T TIGR00957 1271 Q-ETAPPS-------GWPPRGRVEFRNYCLRYREDL----DLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINES 1338 (1522)
T ss_pred c-CCCCCC-------CCCCCCcEEEEEEEEEeCCCC----cccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccC
Confidence 0 000000 002346799999999997532 2469999999999999999999999999999999999999
Q ss_pred CCeEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCC
Q 000522 664 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1445)
Q Consensus 664 ~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~ 730 (1445)
++|+|.++| +|+||||+|.+|+|||||||....+++++...++++.|++++.+..+|+|.+|.|||+
T Consensus 1339 ~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1339 AEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred CCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 999999997 5999999999999999999983336888889999999999999999999999999999
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCE
Q 000522 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1445)
Q Consensus 731 g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~ 810 (1445)
|.+||||||||++||||++++|+|+|||||||+||+++++.|.+. +.. ..+++|+|+|+||++.+..+|+|++|++|+
T Consensus 1419 G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~-l~~-~~~~~TvI~IAHRl~ti~~~DrIlVld~G~ 1496 (1522)
T TIGR00957 1419 GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQST-IRT-QFEDCTVLTIAHRLNTIMDYTRVIVLDKGE 1496 (1522)
T ss_pred CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999888776 443 567899999999999999999999999999
Q ss_pred EEEecCHhHHHhccccCc
Q 000522 811 VKWIGSSADLAVSLYSGF 828 (1445)
Q Consensus 811 i~~~g~~~~~~~~~~~~~ 828 (1445)
|++.|+|+|++++.+.+.
T Consensus 1497 IvE~G~~~eLl~~~~~f~ 1514 (1522)
T TIGR00957 1497 VAEFGAPSNLLQQRGIFY 1514 (1522)
T ss_pred EEEECCHHHHHhCCCHHH
Confidence 999999999987654443
No 82
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.5e-58 Score=535.38 Aligned_cols=512 Identities=24% Similarity=0.288 Sum_probs=408.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcc--CCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000522 290 VNDSIGFAGPLLLNKLIKFLQQ--GSG--HLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIYQKCLYV 365 (1445)
Q Consensus 290 ~~~~~~~~~P~ll~~li~~~~~--~~~--~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy~K~L~l 365 (1445)
..-.+...+|++++.+++.+.. ..+ .......+.+++++.++.+++.-........+..++-......+|++.+.+
T Consensus 41 ~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~l 120 (591)
T KOG0057|consen 41 GAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSL 120 (591)
T ss_pred hhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 3356677899999999999864 222 223345566777777888888877777788888888888899999999999
Q ss_pred CccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000522 366 RLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAITIL-LIPVNKWIANLIA 443 (1445)
Q Consensus 366 ~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~~~~-~~~~~~~~~~~~~ 443 (1445)
+.+...+..+|++.+.|.--...|..... .+..+....+++.++...+++..|.+..+...+.+. .......++.+-.
T Consensus 121 d~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn 200 (591)
T KOG0057|consen 121 DLSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRN 200 (591)
T ss_pred hHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHH
Confidence 99998889999999999888888887654 456777788899999999999999876554433333 3334445567777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 444 NATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTR-SSEVKHLSTRKYLDAWCVFFWATTPTLFSLFTFGL 522 (1445)
Q Consensus 444 ~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R-~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 522 (1445)
+.+++++++.++..+..-+.|.|-.+||.|+-|+...++....- +.|-...+-.. ..++.++.... .+....++..
T Consensus 201 ~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~-sl~~lnfgQ~~--iFsv~~~~im 277 (591)
T KOG0057|consen 201 RFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSS-SLAFLNFGQKA--IFSVALTFIM 277 (591)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHh-HHHHHHHHHHH--HHHHHHHHHH
Confidence 88999999999999999999999999999999999988887653 23322222222 22222222111 1112223333
Q ss_pred HH----HhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcCCCCcccCCCcc
Q 000522 523 FA----LMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSN 598 (1445)
Q Consensus 523 ~~----~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~~~ 598 (1445)
|+ +.++.+|.+...-..+++..|..|+..|...+..+.++..-++-+....+.++ + . +....|.
T Consensus 278 ~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~--~-i-~~~~~~i-------- 345 (591)
T KOG0057|consen 278 VLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDE--D-I-QEAALPI-------- 345 (591)
T ss_pred HHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhh--h-h-hhccCCc--------
Confidence 32 45568999999999999999999999999999988888877765543332111 1 1 1100111
Q ss_pred CCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------
Q 000522 599 FNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------ 672 (1445)
Q Consensus 599 ~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------ 672 (1445)
...++.|+|+|++|+|.+ .+++|+++||+|++||.++|+|+|||||||++++|+++++ ++|+|.++|
T Consensus 346 -~~~~~~I~F~dV~f~y~~-----k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~ 418 (591)
T KOG0057|consen 346 -ELFGGSIEFDDVHFSYGP-----KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEV 418 (591)
T ss_pred -ccCCCcEEEEeeEEEeCC-----CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhh
Confidence 134456999999999973 2446999999999999999999999999999999999999 999999998
Q ss_pred -------eEEEEcCCCCCCCccHHHHHhcCCCC-ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHH
Q 000522 673 -------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 744 (1445)
Q Consensus 673 -------~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~l 744 (1445)
.||||||+..|||+||.+||.+|++. .+++..++++..++++-+..+|+|++|.|||+|..|||||||||+|
T Consensus 419 ~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvsl 498 (591)
T KOG0057|consen 419 SLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSL 498 (591)
T ss_pred ChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHH
Confidence 49999999999999999999999874 5667778888889999999999999999999999999999999999
Q ss_pred HHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHhcc
Q 000522 745 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSL 824 (1445)
Q Consensus 745 ARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~~~ 824 (1445)
|||+.+||+|+++|||||+||.+|++.+++. +.+ ...+||+|+|.||++.++.+|+|+++++|++.+.|+++|++...
T Consensus 499 aRa~lKda~Il~~DEaTS~LD~~TE~~i~~~-i~~-~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s 576 (591)
T KOG0057|consen 499 ARAFLKDAPILLLDEATSALDSETEREILDM-IMD-VMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPS 576 (591)
T ss_pred HHHHhcCCCeEEecCcccccchhhHHHHHHH-HHH-hcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhh
Confidence 9999999999999999999999999999998 444 67899999999999999999999999999999999999998743
Q ss_pred c
Q 000522 825 Y 825 (1445)
Q Consensus 825 ~ 825 (1445)
+
T Consensus 577 ~ 577 (591)
T KOG0057|consen 577 E 577 (591)
T ss_pred h
Confidence 3
No 83
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=2.4e-60 Score=527.96 Aligned_cols=448 Identities=25% Similarity=0.357 Sum_probs=337.5
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------ 672 (1445)
..+.++|.+..+.... ....++++|||++++||.+++||.||||||-..++++|+++. -+|+|..+|
T Consensus 5 ~lL~v~nLsV~f~~~~--~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~ 82 (534)
T COG4172 5 PLLSIRNLSVAFHQEG--GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAA 82 (534)
T ss_pred cceeeeccEEEEecCC--cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcC
Confidence 4567888888876543 234579999999999999999999999999999999999865 367888776
Q ss_pred -----------eEEEEcCCCCC-CCc--cHHHHH----hcCCCCC----hhhHHHHHHHhcchHHHhhccCCCcccccCC
Q 000522 673 -----------SIAYVPQVPWI-LSG--TIRDNI----LFGKNYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1445)
Q Consensus 673 -----------~i~y~~Q~p~l-~~~--ti~~nI----~~g~~~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~ 730 (1445)
+|++++|+|-- .|- ||-.-| ...+..+ +++..+.++..++.+- ...+...
T Consensus 83 se~~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~~p--------~~rl~~y 154 (534)
T COG4172 83 SERQLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIPEP--------EKRLDAY 154 (534)
T ss_pred CHHHHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCCch--------hhhhhhC
Confidence 69999999952 232 665544 3433333 2344555566665431 1223455
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCC
Q 000522 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKG 809 (1445)
Q Consensus 731 g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G 809 (1445)
...|||||||||-||.||..+||+||-||||.|||..+..+|++.+..-....|..+++|||++..+.. ||+|+||.+|
T Consensus 155 PHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G 234 (534)
T COG4172 155 PHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHG 234 (534)
T ss_pred CcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEecc
Confidence 679999999999999999999999999999999999999999986322223347799999999999987 9999999999
Q ss_pred EEEEecCHhHHHhccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcCccchhhH
Q 000522 810 QVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVY 889 (1445)
Q Consensus 810 ~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y 889 (1445)
+++|.|+.+++...... .
T Consensus 235 ~ivE~~~t~~lF~~PqH-------------------------------------------------------------p- 252 (534)
T COG4172 235 EIVETGTTETLFAAPQH-------------------------------------------------------------P- 252 (534)
T ss_pred EEeecCcHHHHhhCCCC-------------------------------------------------------------h-
Confidence 99998876554321000 0
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 890 KNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLR 969 (1445)
Q Consensus 890 ~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~ 969 (1445)
|-+
T Consensus 253 --YTr--------------------------------------------------------------------------- 255 (534)
T COG4172 253 --YTR--------------------------------------------------------------------------- 255 (534)
T ss_pred --HHH---------------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHH
Q 000522 970 AAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFW 1049 (1445)
Q Consensus 970 ~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~ 1049 (1445)
T Consensus 256 -------------------------------------------------------------------------------- 255 (534)
T COG4172 256 -------------------------------------------------------------------------------- 255 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 000522 1050 FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRL 1129 (1445)
Q Consensus 1050 ~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l 1129 (1445)
++
T Consensus 256 ---------------~L--------------------------------------------------------------- 257 (534)
T COG4172 256 ---------------KL--------------------------------------------------------------- 257 (534)
T ss_pred ---------------HH---------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccc
Q 000522 1130 QLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCG 1209 (1445)
Q Consensus 1130 ~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~ 1209 (1445)
++ .|+. +
T Consensus 258 ----------------------------------------------------------------------l~--aeP~-g 264 (534)
T COG4172 258 ----------------------------------------------------------------------LA--AEPS-G 264 (534)
T ss_pred ----------------------------------------------------------------------Hh--cCCC-C
Confidence 00 0000 0
Q ss_pred CCCCCCCCCCCccEEEEEEEEEeCCC---------CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcE
Q 000522 1210 YQSLSPDWPFQGLIEFQNVTMRYKPS---------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQ 1280 (1445)
Q Consensus 1210 ~~~~~~~wp~~g~I~f~nVs~~Y~~~---------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~ 1280 (1445)
..+|..-...-.++.+||.+.|+-. .-.+.+||||+.++||.+||||+||||||||-.+|+|+++++ |+
T Consensus 265 -~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s~-G~ 342 (534)
T COG4172 265 -DPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPSQ-GE 342 (534)
T ss_pred -CCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCcC-ce
Confidence 0011111122357778888877421 124799999999999999999999999999999999999976 99
Q ss_pred EEECCeeCCCCChHh---hhcceEEEcCCCc--ccC-ccHHHhcC----CCC-CC----ChHHHHHHHHHccHHHHHHhC
Q 000522 1281 ILVDGLNIINTPVRD---LRGRFAVVPQSPF--LFE-GSLRDNLD----PFH-MN----DDLKIWSVLEKCHVKEEVEAV 1345 (1445)
Q Consensus 1281 I~IDG~di~~i~~~~---lR~~i~~VpQdp~--lF~-gTIReNLd----p~~-~~----sd~ei~~aL~~~~l~~~i~~l 1345 (1445)
|.++|.||...+.++ +|+++-+|.|||+ |=+ .||-+-|. -.. .. .|+.+.+||+.+||+...
T Consensus 343 I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp~~--- 419 (534)
T COG4172 343 IRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDPAT--- 419 (534)
T ss_pred EEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCChhH---
Confidence 999999999888765 5799999999997 222 25544442 111 11 245677777777665432
Q ss_pred CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-c
Q 000522 1346 GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-M 1422 (1445)
Q Consensus 1346 gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~ 1422 (1445)
...-...+||||||||+||||++-+|++++||||||+||......|.+.+++.- .+-+-++|+|+|..++. |
T Consensus 420 -----r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~VvrAl~ 494 (534)
T COG4172 420 -----RNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAVVRALC 494 (534)
T ss_pred -----hhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHHHHHhh
Confidence 233355799999999999999999999999999999999999999999998763 47899999999999985 8
Q ss_pred CEEEEEeCCeEeeecCCCC
Q 000522 1423 DEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1423 DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|+|+||.+|+|||+|+-++
T Consensus 495 ~~viVm~~GkiVE~G~~~~ 513 (534)
T COG4172 495 HRVIVMRDGKIVEQGPTEA 513 (534)
T ss_pred ceEEEEeCCEEeeeCCHHH
Confidence 9999999999999997543
No 84
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-58 Score=589.87 Aligned_cols=195 Identities=23% Similarity=0.339 Sum_probs=159.3
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
..|+++||+++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+++. .++
T Consensus 311 ~~l~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 311 PLLKMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred ceEEEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 36999999999964 46999999999999999999999999999999999999999999999741 269
Q ss_pred EEEcCCC--cccC-ccHHHhcCCC-CCCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHhccC
Q 000522 1301 AVVPQSP--FLFE-GSLRDNLDPF-HMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALLKS 1375 (1445)
Q Consensus 1301 ~~VpQdp--~lF~-gTIReNLdp~-~~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1445)
+|+||++ .+.. .|+.+|+... ....++++.+.|+.. |+.. ........||||||||++||||++++
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~---------~l~~~~~~~~~~~LSgGekqRl~La~~l~~~ 448 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGF---------GFQGDKVTEETRRFSGGEKARLVLALIVWQR 448 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHc---------CCChhHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 9999985 3443 3788876321 111223344444443 4532 34445567999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEe-eecCC
Q 000522 1376 SKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLP-HCGCA 1439 (1445)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vv-E~G~p 1439 (1445)
|++|||||||++||..+...+.+.|++. . .|||+|||+++.+.. ||+|++|++|+++ ..|++
T Consensus 449 p~lLlLDEPt~~LD~~~~~~l~~~L~~~-~-gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~ 512 (638)
T PRK10636 449 PNLLLLDEPTNHLDLDMRQALTEALIDF-E-GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDL 512 (638)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCH
Confidence 9999999999999999999999999876 4 599999999999876 8999999999997 44554
No 85
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=1.1e-57 Score=616.19 Aligned_cols=212 Identities=20% Similarity=0.277 Sum_probs=174.9
Q ss_pred cEEEEEEEEEeCC-----------CCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCeeC
Q 000522 1222 LIEFQNVTMRYKP-----------SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNI 1288 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~-----------~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~--~~G~I~IDG~di 1288 (1445)
.+.|+||++.++. +...+|+|||++|+|||.+||+||||||||||+++|.|..++ .+|+|.+||.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 6999999998742 123699999999999999999999999999999999999873 689999999886
Q ss_pred CCCChHhhhcceEEEcCCCcccCc-cHHHhcCCCC------CCChH----HHHHHHHHccHHHHHHhCCCchhhhcCC-C
Q 000522 1289 INTPVRDLRGRFAVVPQSPFLFEG-SLRDNLDPFH------MNDDL----KIWSVLEKCHVKEEVEAVGLETFVKESG-I 1356 (1445)
Q Consensus 1289 ~~i~~~~lR~~i~~VpQdp~lF~g-TIReNLdp~~------~~sd~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G-~ 1356 (1445)
. ....|+.++||+|++.+++. |+||||.+.. ..+++ .+.++++..+|.+. .|+.+|..+ .
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-----~~~~vg~~~~~ 1018 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-----KDAIVGLPGVT 1018 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-----hCCccCCCCCC
Confidence 4 34567889999999988765 9999996421 12222 24556666665543 355665433 4
Q ss_pred CCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhH--HhhcCEEEEEeC-Ce
Q 000522 1357 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST--VLNMDEILILDH-GH 1432 (1445)
Q Consensus 1357 ~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~t--i~~~DrI~Vl~~-G~ 1432 (1445)
.||||||||++|||||+.+|+||+||||||+||+.+...+.+.|++.. +++|||+++|+++. ...||++++|++ |+
T Consensus 1019 ~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~ 1098 (1470)
T PLN03140 1019 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQ 1098 (1470)
T ss_pred CcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCE
Confidence 699999999999999999999999999999999999999999998864 48999999999984 456899999996 89
Q ss_pred EeeecCCCC
Q 000522 1433 LPHCGCAAA 1441 (1445)
Q Consensus 1433 vvE~G~p~~ 1441 (1445)
++++|++.+
T Consensus 1099 ~v~~G~~~~ 1107 (1470)
T PLN03140 1099 VIYSGPLGR 1107 (1470)
T ss_pred EEEECCccc
Confidence 999998753
No 86
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.6e-57 Score=584.44 Aligned_cols=535 Identities=22% Similarity=0.255 Sum_probs=390.7
Q ss_pred hhHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCC-CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 887 TVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSS-QTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAF 965 (1445)
Q Consensus 887 ~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~-~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~ 965 (1445)
++.+..++..+|.++...++..+.... ....+..+....+..... ........|....++..++.+++.-...+....
T Consensus 190 sl~~al~~~f~~~~~~~~~~~~~~~~~-~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~ 268 (1381)
T KOG0054|consen 190 SLLRALLRTFGRTFLLSGIFLFLRDLA-GFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFR 268 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-ccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 445555555555554444333333333 555666666655543222 122223444455555566666665555566677
Q ss_pred HHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHH
Q 000522 966 GSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLL 1045 (1445)
Q Consensus 966 ~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1045 (1445)
.+.|.-..+-..++++.++..-.--..++.|+|+|-++.|.+.+++..+.....+...+-.+++...+.-...+ -+++.
T Consensus 269 ~g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~-sa~~G 347 (1381)
T KOG0054|consen 269 VGMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGP-SALAG 347 (1381)
T ss_pred hhhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-HHHHH
Confidence 88888888888999999999988888889999999999999999998877666555544333332222111111 12222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Q 000522 1046 VPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWL 1125 (1445)
Q Consensus 1046 ~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl 1125 (1445)
+.+++++.-++.+..+..+..++.....+..-....+|.++|+++||.|+||+.|.++..+.-+.-.+...+....+...
T Consensus 348 ~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~ 427 (1381)
T KOG0054|consen 348 VAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALN 427 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333333334333333344444444444445567899999999999999999999998776554433333322222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc
Q 000522 1126 SLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQE 1205 (1445)
Q Consensus 1126 ~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e 1205 (1445)
..... ...+++.++++.+... ...+..++..+..++++.-.+..++..+......+-++.+|++|+.+|+..++.
T Consensus 428 ~~~~~-~~p~lv~~~tF~~~v~----~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~ 502 (1381)
T KOG0054|consen 428 SFLNF-FSPVLVSVVTFVVFVL----LLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEEL 502 (1381)
T ss_pred HHHHH-HHHHHHHHHHHHHHhh----ccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 22111 1122222222222210 112345666777788888888888888888888888999999999999976543
Q ss_pred ccccCCCCCCCCCCCccEEEEEEEEEeCCC-CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Q 000522 1206 ELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD 1284 (1445)
Q Consensus 1206 ~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ID 1284 (1445)
+...... .+.-+.+-.|+++|.+|++.++ .++.|+||||+|++||.+||||++|||||||+++|+|-++..+|++.++
T Consensus 503 ~~~~~~~-~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~ 581 (1381)
T KOG0054|consen 503 DPDSVER-SPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVN 581 (1381)
T ss_pred Ccccccc-CCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEc
Confidence 3211111 1222345579999999999864 4459999999999999999999999999999999999999999999998
Q ss_pred CeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhH
Q 000522 1285 GLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQ 1362 (1445)
Q Consensus 1285 G~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQ 1362 (1445)
|. ++||||.|++|+|||||||.++.+++++...++++.|+|...++.+ |-.|+|||+|.||||||
T Consensus 582 gs-------------iaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQ 648 (1381)
T KOG0054|consen 582 GS-------------VAYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQ 648 (1381)
T ss_pred Ce-------------EEEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhH
Confidence 84 9999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeccccCCCHHHHHH-HHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASI-LQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~-Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||||+||||++++++|.+||+|-|+||+++.+. +.+.|+...++||+|.|||.++.+.+||+|+||++|+|+|.|+++|
T Consensus 649 KqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~e 728 (1381)
T KOG0054|consen 649 KQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEE 728 (1381)
T ss_pred HHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHH
Confidence 999999999999999999999999999999775 5678888889999999999999999999999999999999999987
Q ss_pred C
Q 000522 1442 P 1442 (1445)
Q Consensus 1442 ~ 1442 (1445)
+
T Consensus 729 l 729 (1381)
T KOG0054|consen 729 L 729 (1381)
T ss_pred H
Confidence 6
No 87
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-56 Score=518.01 Aligned_cols=539 Identities=19% Similarity=0.235 Sum_probs=390.1
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSG--HLDGYVLAIALGLTSILKSFFDTQYSFHLSKL 346 (1445)
Q Consensus 269 l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~--~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~ 346 (1445)
.++...+ .++.++.++++.++..+....-=++-..+|..-.-... ...-++-+++.=+..++.++..+.-.......
T Consensus 7 ~i~l~~~-~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~A 85 (573)
T COG4987 7 YLRLYKR-HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYIFNVMLPSAGVRGLAILRTAARYVERLVSHDA 85 (573)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 3444444 66666666665554443333222222223321111111 11223334444455677777766666667788
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHH-HHH-HHHHHHHHHHhhHhHHHHHHH
Q 000522 347 KLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAW-SLP-FQIGVALYLLYTQVKFAFVSG 424 (1445)
Q Consensus 347 ~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~-~~p-~~i~i~~~lL~~~lg~a~l~~ 424 (1445)
..++-+.+.-.+|+|....+......+..|++.|.+..|++.+++...-+..-| .+. +.+++.+.+-+..++.+.+.+
T Consensus 86 tfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~ 165 (573)
T COG4987 86 TFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLG 165 (573)
T ss_pred HHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 889999999999999999998888888999999999999999998764433333 222 233333444466777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 425 LAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWC 504 (1445)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~ 504 (1445)
+...+..+.+...+.+.-++..++..+.+..--+.+.+.+.|....+++|.++.+.+.+++.-..=.+..+|...+..+.
T Consensus 166 ~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~ 245 (573)
T COG4987 166 LILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLS 245 (573)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666666666666666666677777777777788999999999999999999998877664333333333333333333
Q ss_pred HHHHHHHHHHH---HHHHHHHHHHhCCCCC-HhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCCcc
Q 000522 505 VFFWATTPTLF---SLFTFGLFALMGHQLD-AAMVFTCLALFNSLISPLNS-FPWVINGLIDAFISIRRLTRFLGCSEYK 579 (1445)
Q Consensus 505 ~~~~~~~~~~~---~~~~f~~~~~~~~~Lt-~~~~ft~l~l~~~l~~pl~~-l~~~i~~~~~a~~s~~Ri~~fL~~~e~~ 579 (1445)
.++......+. .++|++.-. -.+..+ +..+...+..|..+- ++.. .|.++..+.+...|.+|+.+.++.++..
T Consensus 246 ~a~~~l~~g~~v~~~l~w~a~~~-~~G~~~~~~aa~~ll~~f~~~e-af~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~ 323 (573)
T COG4987 246 DAILLLIAGLLVIGLLLWMAAQV-GAGALAQPGAALALLVIFAALE-AFEPLAPGAFQHLGQVIASARRLNDILDQKPEV 323 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-cCCCcchhHHHHHHHHHHHHHH-HHhhhcchhHHHhhHHHHHHHHHhhhccCCccc
Confidence 33322221111 122222211 122344 233323333233332 2222 2367788899999999999988765432
Q ss_pred hhhhhhcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhc
Q 000522 580 HELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILG 659 (1445)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g 659 (1445)
... . ... ...+..++++|++|+|+..+ .++|+|+||++++||.++|+|++|||||||++.+.|
T Consensus 324 ~~~-~-~~~-----------~~~~~~l~~~~vsF~y~~~~----~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~ 386 (573)
T COG4987 324 TFP-D-EQT-----------ATTGQALELRNVSFTYPGQQ----TKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAG 386 (573)
T ss_pred CCC-c-ccc-----------CCccceeeeccceeecCCCc----cchhhccceeecCCCeEEEECCCCCCHHHHHHHHHh
Confidence 211 0 000 11223799999999998542 346999999999999999999999999999999999
Q ss_pred CccCCCeEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCCC-ChhhHHHHHHHhcchHHHhhccCCCcc
Q 000522 660 EMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMA 725 (1445)
Q Consensus 660 ~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~d~~~~~~gd~t 725 (1445)
.++|++|+|..+| .+++++|.+.+|++|+|||+.++++. ++|...++++..+|++-++..|+|.+|
T Consensus 387 ~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t 466 (573)
T COG4987 387 AWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNT 466 (573)
T ss_pred ccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhc
Confidence 9999999999987 58999999999999999999999864 678889999999999999999999999
Q ss_pred cccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEE
Q 000522 726 YIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVV 805 (1445)
Q Consensus 726 ~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~ 805 (1445)
.+||+|..||||||||++|||++.+|+++++|||||.+||+.|++++++. +.. ..+|||+|+||||+..++.+|+|++
T Consensus 467 ~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~l-l~~-~~~~kTll~vTHrL~~le~~drIiv 544 (573)
T COG4987 467 WLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLAL-LFE-HAEGKTLLMVTHRLRGLERMDRIIV 544 (573)
T ss_pred hhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHH-HHH-HhcCCeEEEEecccccHhhcCEEEE
Confidence 99999999999999999999999999999999999999999999999997 333 5679999999999999999999999
Q ss_pred EeCCEEEEecCHhHHHhccccCcc
Q 000522 806 MDKGQVKWIGSSADLAVSLYSGFW 829 (1445)
Q Consensus 806 l~~G~i~~~g~~~~~~~~~~~~~~ 829 (1445)
|++|+++++|+|.+++.+++.+.+
T Consensus 545 l~~Gkiie~G~~~~Ll~~~g~~~~ 568 (573)
T COG4987 545 LDNGKIIEEGTHAELLANNGRYKR 568 (573)
T ss_pred EECCeeeecCCHHhhhccccHHHH
Confidence 999999999999999886655443
No 88
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.2e-56 Score=610.42 Aligned_cols=474 Identities=18% Similarity=0.201 Sum_probs=356.5
Q ss_pred HHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHH
Q 000522 349 KLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 427 (1445)
Q Consensus 349 ~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~ 427 (1445)
+....+...+|++.++.+...+.+.+.|+++|.++.|++.+...+. .+..+....+.++.++.++.....+.+++.+++
T Consensus 1028 ~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i~~ 1107 (1560)
T PTZ00243 1028 RGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVALVPC 1107 (1560)
T ss_pred HHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344677889999999999999999999999999999999998654 345555555555554444433323333322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 428 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFF 507 (1445)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~ 507 (1445)
+++...+..++.+..+..++......+.-.+.++|.++|+++||.|+.|+.+.++..+.-+...+...+......+....
T Consensus 1108 ~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~ 1187 (1560)
T PTZ00243 1108 GYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWLGVR 1187 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333334444555556666666777778899999999999999999999988887665444443333222222222221
Q ss_pred HHHH--HHHHHHHHHHHH--HHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcch--h
Q 000522 508 WATT--PTLFSLFTFGLF--ALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH--E 581 (1445)
Q Consensus 508 ~~~~--~~~~~~~~f~~~--~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~--~ 581 (1445)
.... ...+.++.++++ ....+.++++.+..++.+...+..|+..+...+..+..++.|++||.+|++..+.++ .
T Consensus 1188 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~ 1267 (1560)
T PTZ00243 1188 VEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHEDMPE 1267 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 1111 111112222222 222345789988888888899999999999999999999999999999996422111 0
Q ss_pred hhh-------hcCCCCc------ccCC--C--ccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEc
Q 000522 582 LEQ-------AANSPSY------ISNG--L--SNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIG 644 (1445)
Q Consensus 582 ~~~-------~~~~~~~------~~~~--~--~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG 644 (1445)
... ....+.+ .... . .+.....+.|+|+|++|+|+++. +++|+|+||+|++||.++|||
T Consensus 1268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~----~~vL~~vsf~I~~GekVaIVG 1343 (1560)
T PTZ00243 1268 LDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGL----PLVLRGVSFRIAPREKVGIVG 1343 (1560)
T ss_pred ccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCC----CceeecceEEECCCCEEEEEC
Confidence 000 0000000 0000 0 00011245799999999996431 346999999999999999999
Q ss_pred CCCCcHHHHHHHHhcCccCCCeEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhc
Q 000522 645 EVGSGKSSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACT 711 (1445)
Q Consensus 645 ~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~ 711 (1445)
++|||||||+++|+|.++|++|+|.++| .|+||||+|.||+|||||||..+.+++++...++++.|+
T Consensus 1344 rTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a~ 1423 (1560)
T PTZ00243 1344 RTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVG 1423 (1560)
T ss_pred CCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHCC
Confidence 9999999999999999999999999987 599999999999999999998777888899999999999
Q ss_pred chHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccC-CCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEE
Q 000522 712 LDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG-SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILC 790 (1445)
Q Consensus 712 l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~-~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilv 790 (1445)
+++.+..+|+|.+|.|||+|.+||||||||++||||++++ |+|+|||||||+||+++++.|.+. +.. ..+++|+|+|
T Consensus 1424 l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~-L~~-~~~~~TvI~I 1501 (1560)
T PTZ00243 1424 LRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQAT-VMS-AFSAYTVITI 1501 (1560)
T ss_pred ChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HCCCCEEEEE
Confidence 9999999999999999999999999999999999999996 899999999999999999988776 443 4578999999
Q ss_pred ccCchhhhhCCEEEEEeCCEEEEecCHhHHHhc-cccCc
Q 000522 791 THNVQAISAADMVVVMDKGQVKWIGSSADLAVS-LYSGF 828 (1445)
Q Consensus 791 th~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~ 828 (1445)
+||++.+..||+|++|++|+|++.|+++|++++ ++.+.
T Consensus 1502 AHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~ 1540 (1560)
T PTZ00243 1502 AHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFH 1540 (1560)
T ss_pred eccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHH
Confidence 999999999999999999999999999999864 44443
No 89
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=3.5e-57 Score=577.94 Aligned_cols=191 Identities=24% Similarity=0.343 Sum_probs=158.6
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+ |.++ +++
T Consensus 319 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 5899999999964 36999999999999999999999999999999999999999999999 4332 699
Q ss_pred EEcCCC-cccCc-cHHHhcCCCCC-C--C--hHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHhc
Q 000522 1302 VVPQSP-FLFEG-SLRDNLDPFHM-N--D--DLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1373 (1445)
Q Consensus 1302 ~VpQdp-~lF~g-TIReNLdp~~~-~--s--d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL 1373 (1445)
|++|++ .+++. |+++|+..... . . +.++.+ .+..+|+.. ........||||||||++||||++
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~---------~l~~~~l~~~~~~~~~~~LSgGekqRl~la~al~ 456 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLG---------YLQDFLFHPKRAMTPVKALSGGERNRLLLARLFL 456 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchHHHHHH---------HHHhcCCCHHHHhChhhhCCHHHHHHHHHHHHHh
Confidence 999986 46654 99999964321 1 1 122233 333334532 334445579999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEe-CCeEeee
Q 000522 1374 KSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD-HGHLPHC 1436 (1445)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~-~G~vvE~ 1436 (1445)
++|++|||||||++||..+.+.+.+.|++. +.|||+|||+++.+.. ||+|++|+ +|++.++
T Consensus 457 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~ 519 (635)
T PRK11147 457 KPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRY 519 (635)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEc
Confidence 999999999999999999999999999875 5699999999998875 89999998 8999876
No 90
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.4e-56 Score=513.42 Aligned_cols=478 Identities=22% Similarity=0.256 Sum_probs=352.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHH
Q 000522 945 LCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANF 1024 (1445)
Q Consensus 945 ~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~ 1024 (1445)
...+.++..++..+|++.+.+.+.+.-.+++..++...+++|..--...+....++ |++.+...+...-...+...
T Consensus 69 al~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~Lr----DL~qvR~Fltg~g~~A~fDa 144 (580)
T COG4618 69 ALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPLR----DLDQVRQFLTGTGLTAFFDA 144 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhhHHhhcCCCccccchh----hHHHHHHHHcCCCcchhcCC
Confidence 34455667788899999999999999999999999999888876554444455554 55555544422110000000
Q ss_pred HhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHH
Q 000522 1025 VGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKF 1104 (1445)
Q Consensus 1025 ~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~ 1104 (1445)
-..-..+.+++...||+.++.+.-.++...+...-...+++--+...+....-..+..-+..+..+|+|.|......+++
T Consensus 145 PW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW 224 (580)
T COG4618 145 PWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRW 224 (580)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHH
Confidence 00011122334455666554444333333322222222222222233334444567778899999999999987777666
Q ss_pred HHHHHHHH----HHHHHHH---HHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHH
Q 000522 1105 KEHVVLYQ----RTSYSEL---TASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLG 1177 (1445)
Q Consensus 1105 ~~~~d~~~----~~~~~~~---~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~ 1177 (1445)
.+....+. ++..... ...+-+-..+|. .+. .+-+++. ..+..++|.+...-........++.
T Consensus 225 ~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs---~iL---g~GA~Lv-----i~ge~t~G~mIA~SIl~gRaLaPid 293 (580)
T COG4618 225 GRFNAAYLSAQERASDRNGAFGALSRALRMALQS---AVL---GLGAWLV-----IKGEITPGMMIAGSILSGRALAPID 293 (580)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH---HHH---hcceeeE-----EcCcCCcchhhHHHHHhhhhhccHH
Confidence 55444433 3332211 111111111111 111 1111111 1234567766555555555667888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEEC
Q 000522 1178 NFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVG 1257 (1445)
Q Consensus 1178 ~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvG 1257 (1445)
..+..|.++..+..|..|+.++++..++.... ...| - .+|.+.++++++.=++..+|+|+|+||+++|||-+||+|
T Consensus 294 ~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~-m~LP--~-P~g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIG 369 (580)
T COG4618 294 LAIANWKQFVAARQSYKRLNELLAELPAAAER-MPLP--A-PQGALSVERLTAAPPGQKKPILKGISFALQAGEALGIIG 369 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCccccCC-CCCC--C-CCceeeEeeeeecCCCCCCcceecceeEecCCceEEEEC
Confidence 99999999999999999999999765543211 1111 1 268999999999666666799999999999999999999
Q ss_pred CCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCC-CCChHHHHHHHHHc
Q 000522 1258 RTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKC 1336 (1445)
Q Consensus 1258 rTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~-~~sd~ei~~aL~~~ 1336 (1445)
|||||||||.++|.|..+|.+|+|.+||-|+.+.+.+++-++|||.|||-.||+|||+|||.-|+ +.+++.|.+|.+.+
T Consensus 370 PSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lA 449 (580)
T COG4618 370 PSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLA 449 (580)
T ss_pred CCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999997666 66778899999999
Q ss_pred cHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHh-CCCcEEEEec
Q 000522 1337 HVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSE-CKGMTVITIA 1413 (1445)
Q Consensus 1337 ~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~-~~~~TvI~Ia 1413 (1445)
+.+|.|-.+ ||||.+||+|..|||||||||+||||++.+|++++||||-||||.+-|+.+.++|.+. .+|+|+|+||
T Consensus 450 gvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvvia 529 (580)
T COG4618 450 GVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIA 529 (580)
T ss_pred ChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEe
Confidence 999999999 9999999999999999999999999999999999999999999999999999998765 4799999999
Q ss_pred cChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1414 HRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1414 Hrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||.+.+..+|+|+||++|++..+|+-+|
T Consensus 530 HRPs~L~~~Dkilvl~~G~~~~FG~r~e 557 (580)
T COG4618 530 HRPSALASVDKILVLQDGRIAAFGPREE 557 (580)
T ss_pred cCHHHHhhcceeeeecCChHHhcCCHHH
Confidence 9999999999999999999999997543
No 91
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=4.3e-55 Score=552.12 Aligned_cols=519 Identities=15% Similarity=0.112 Sum_probs=374.8
Q ss_pred HHH-HHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 273 ICC-AYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLR 351 (1445)
Q Consensus 273 l~~-~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir 351 (1445)
+++ .+++.++..+++.++..++....|.+++.+++..... .....+. +++..++..++.....+...+.+.++.
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (555)
T TIGR01194 11 LLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFL-GQGSLFS----FGGLCLLALLFRIGADIFPAYAGMHII 85 (555)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cchHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566 7788888888899999999999999999887632111 1111111 112233444555566677788899999
Q ss_pred HHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hh--HhHHHHHHHHHHH
Q 000522 352 SSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLL-YT--QVKFAFVSGLAIT 428 (1445)
Q Consensus 352 ~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL-~~--~lg~a~l~~~~~~ 428 (1445)
..+...+|+|.++++.....+.++|++++.++.|++.+......+..+....+.+++++.++ +. .+++.+ ++++
T Consensus 86 ~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li~---l~~~ 162 (555)
T TIGR01194 86 ANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAIT---ISAI 162 (555)
T ss_pred HHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH---HHHH
Confidence 99999999999999998888889999999999999999987655555554444444333332 22 233322 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 429 ILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQ--IFSSWLMKTRSSEVKHLSTRKYLDAWCVF 506 (1445)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~--~~~~~i~~~R~~El~~~~~~~~~~~~~~~ 506 (1445)
++.+.+..+..++..+..++..+..++..+.+.|.+.|++++|.++.++ ...+++++.-++-.+...+..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (555)
T TIGR01194 163 IIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAEN 242 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2333334455566677777788888899999999999999999999854 33333333222211211111111111111
Q ss_pred HHHHHHHHHHHHHHHHHHH---hCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhh
Q 000522 507 FWATTPTLFSLFTFGLFAL---MGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 583 (1445)
Q Consensus 507 ~~~~~~~~~~~~~f~~~~~---~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~ 583 (1445)
+.... ..+.++.+.+ ..+.++.+.+++++.+...+..|+..+...+..+.++.+|.+||.++++.++.++...
T Consensus 243 ~~~~~----~~~~~~~~~~~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~ 318 (555)
T TIGR01194 243 FGQLL----FFLLIGCALFAAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPEL 318 (555)
T ss_pred HHHHH----HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 11111 1111111111 1257999999999999999999999999999999999999999999986422111000
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccC
Q 000522 584 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 663 (1445)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~ 663 (1445)
....... ............++++|++|+|+..+. ..+++|+|+||++++||+++|+||||||||||+++|+|+++|
T Consensus 319 ~~~~~~~---~~~~~~~~~~~~i~~~~v~f~y~~~~~-~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p 394 (555)
T TIGR01194 319 ELSDADN---VLLLAHDKSVDSIELKDVHMNPKAPEG-SEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIP 394 (555)
T ss_pred ccccccc---ccccccCCCCceEEEEEEEEEeCCCCC-CcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 0000000 000000012356999999999974311 113469999999999999999999999999999999999999
Q ss_pred CCeEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCC
Q 000522 664 THGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEK 730 (1445)
Q Consensus 664 ~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~ 730 (1445)
++|+|.++| .++||+|+|++|++|+++|+ ..+.++++.+++++.++++++++.+|+|++|.
T Consensus 395 ~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~---- 468 (555)
T TIGR01194 395 QEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT---- 468 (555)
T ss_pred CCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc----
Confidence 999999986 48999999999999999995 33456777889999999999999999999984
Q ss_pred CCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCE
Q 000522 731 GVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1445)
Q Consensus 731 g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~ 810 (1445)
.+||||||||++||||++++|+|+|||||||+||+++++.+.+.++.....+++|+|+||||++.+..||+|++|++|+
T Consensus 469 -~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~ 547 (555)
T TIGR01194 469 -TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGC 547 (555)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCE
Confidence 7899999999999999999999999999999999999999987643221235899999999999999999999999999
Q ss_pred EEEe
Q 000522 811 VKWI 814 (1445)
Q Consensus 811 i~~~ 814 (1445)
+++.
T Consensus 548 i~~~ 551 (555)
T TIGR01194 548 IVKD 551 (555)
T ss_pred EEEe
Confidence 9864
No 92
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-57 Score=508.22 Aligned_cols=515 Identities=22% Similarity=0.301 Sum_probs=382.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHH---HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 286 LLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAI---ALGLTS---ILKSFFDTQYSFHLSKLKLKLRSSIMTIIY 359 (1445)
Q Consensus 286 l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~---~l~~~~---~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy 359 (1445)
++.++.-++...-|.+.+.+++.+.. +...-+.+.. .+.+.+ .+..++.+...+...++..-....+-..+|
T Consensus 222 ~ll~i~rli~~~~pi~~k~iv~~lta--p~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lf 299 (790)
T KOG0056|consen 222 FLLIIGRLINVSLPILSKWIVDELTA--PDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELF 299 (790)
T ss_pred HHHHHHHHHhhhhHHhHHHHHHhhcC--cchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHH
Confidence 34444556677789999999988764 2222222222 222222 123556666666666666666667888899
Q ss_pred HHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHH---HHHHHHHHH
Q 000522 360 QKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI---TILLIPVNK 436 (1445)
Q Consensus 360 ~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~---~~~~~~~~~ 436 (1445)
+|...++....-.+.+|++...|......+.-.-..+..+-...+.+++++...+. ..-...|+++ +.+...+..
T Consensus 300 rHlh~LSlrwHL~rrtGeVLrvmdrGtssvtll~yvVF~i~PtllDl~va~vYF~~--~Fn~wFgLIVfl~m~lY~~~Ti 377 (790)
T KOG0056|consen 300 RHLHNLSLRWHLNRRTGEVLRVMDRGTSSVTLLEYVVFQIGPTLLDLGVAMVYFFI--KFNIWFGLIVFLMMLLYCYVTI 377 (790)
T ss_pred HHHHhhceeeeecccccceeehhccCcchhhHHHHHHhhcccHHHHhhhhhhhhhh--hHhHHHHHHHHHHHHHHhheee
Confidence 99999998777677889999988776666652222333443444455555443333 3333333333 333333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 437 WIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWL----MKTRSSEVKHLSTRKYLDAWCVFFWATTP 512 (1445)
Q Consensus 437 ~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i----~~~R~~El~~~~~~~~~~~~~~~~~~~~~ 512 (1445)
.+...-.+++++++..-.+--....+.|-|-.+||.|+.|+...++. .+..++|-+.+.....+......+...
T Consensus 378 ~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~l-- 455 (790)
T KOG0056|consen 378 KITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGL-- 455 (790)
T ss_pred eeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh--
Confidence 44444556666666665555666778888999999999998665554 344445544444333333222222111
Q ss_pred HHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcCCCCcc
Q 000522 513 TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYI 592 (1445)
Q Consensus 513 ~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~ 592 (1445)
.+.....+.+|.+..+.+++|...-...++-.+..|++.+......+....+-++|+.+.++.++...+.. ..++
T Consensus 456 gll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P---~a~p-- 530 (790)
T KOG0056|consen 456 GLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLP---GAPP-- 530 (790)
T ss_pred HHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCC---CCCC--
Confidence 11222334567677889999998888889999999999999999999999999999999997543211111 1111
Q ss_pred cCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC
Q 000522 593 SNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG 672 (1445)
Q Consensus 593 ~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~ 672 (1445)
.....+.|+++|++|+|+++ +++|+||||++++|+.+++|||||+||||+++.|.+.++..+|+|.+||
T Consensus 531 ------l~~~~G~i~fsnvtF~Y~p~-----k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDg 599 (790)
T KOG0056|consen 531 ------LKVTQGKIEFSNVTFAYDPG-----KPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDG 599 (790)
T ss_pred ------ccccCCeEEEEEeEEecCCC-----CceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcC
Confidence 12356789999999999753 3459999999999999999999999999999999999999999999998
Q ss_pred -------------eEEEEcCCCCCCCccHHHHHhcCCCC-ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000522 673 -------------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1445)
Q Consensus 673 -------------~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQ 738 (1445)
+||.|||+..|||.||..||.+|++- ..|...++.+|++.++.|..+|+|++|.|||+|..||||+
T Consensus 600 qdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGE 679 (790)
T KOG0056|consen 600 QDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGE 679 (790)
T ss_pred chHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcc
Confidence 59999999999999999999999874 4456677889999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHh
Q 000522 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSA 818 (1445)
Q Consensus 739 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~ 818 (1445)
|||||+||++.++|.|++|||+|||||.++++.|-.. +.. +..++|.|+|.||++.+-+||.|++++||+|+|.|+++
T Consensus 680 KQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaa-L~r-lca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~He 757 (790)
T KOG0056|consen 680 KQRVAIARTILKAPSIILLDEATSALDTNTERAIQAA-LAR-LCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHE 757 (790)
T ss_pred hhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHH-HHH-HhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHH
Confidence 9999999999999999999999999999999988654 433 67899999999999999999999999999999999999
Q ss_pred HHHhcc
Q 000522 819 DLAVSL 824 (1445)
Q Consensus 819 ~~~~~~ 824 (1445)
|+...+
T Consensus 758 eLl~rd 763 (790)
T KOG0056|consen 758 ELLKRD 763 (790)
T ss_pred HHHhcc
Confidence 998773
No 93
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=4.9e-56 Score=565.70 Aligned_cols=197 Identities=22% Similarity=0.330 Sum_probs=159.5
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
..++++||+++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+++ +.++
T Consensus 507 ~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 507 PIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred ceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 469999999999543 3699999999999999999999999999999999999999999999875 3579
Q ss_pred EEEcCCCcccCccHHHhcC-C----CCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000522 1301 AVVPQSPFLFEGSLRDNLD-P----FHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1445)
Q Consensus 1301 ~~VpQdp~lF~gTIReNLd-p----~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1445)
+|+||++. ..-++.+|.. . +...+++++.++|+..++.+ .........||||||||++||||++++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~--------~~~~~~~~~LSgGqkqRvaLAraL~~~ 645 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTG--------NLALQPMYTLSGGQKSRVAFAKITFKK 645 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCCh--------HHhcCCccccCHHHHHHHHHHHHHhcC
Confidence 99999973 2224444421 1 11234455555555554421 123445668999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEe-eecCCC
Q 000522 1376 SKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLP-HCGCAA 1440 (1445)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vv-E~G~p~ 1440 (1445)
|++|||||||++||..+.+.+.+.+++. + .|||+|||+++.+.. ||+|++|++|+++ ..|++.
T Consensus 646 p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~ 710 (718)
T PLN03073 646 PHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFH 710 (718)
T ss_pred CCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHH
Confidence 9999999999999999999998888764 4 499999999999986 8999999999998 456654
No 94
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=7.1e-55 Score=556.87 Aligned_cols=514 Identities=15% Similarity=0.126 Sum_probs=385.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 900 ITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYS---TSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHN 976 (1445)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~---~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~ 976 (1445)
.+++.+++.++...+....+++.+...+.....+.... ...++++++++.++..+..++...+......+..+++|+
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~ 176 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLYS 176 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445555566666666776666553211110000 112233334444455555555556666677788888888
Q ss_pred HHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHH-HHHHHHHHHHHHHHHHHHH
Q 000522 977 TLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSY-VQVFFLLLLVPFWFIYSKL 1055 (1445)
Q Consensus 977 ~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~pl~~~~~~i 1055 (1445)
+.+++....++.|||+ ++|++.+|+++|++.+.+.+...+..++..++.+++.++.+.. ..|.+.++++...++...+
T Consensus 177 ~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~i 255 (659)
T TIGR00954 177 KYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGVV 255 (659)
T ss_pred HHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 8888888888999997 8899999999999999999988888888888888776666654 5565545444444444455
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 000522 1056 QFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAF 1135 (1445)
Q Consensus 1056 ~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~ 1135 (1445)
.+++.+..+.+.+......+.+.+.+.|.++|+++||+|+.|+.+.+++.+..++..+..+.......++....+++...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~~ 335 (659)
T TIGR00954 256 LTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAKY 335 (659)
T ss_pred HHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 55566666666666666777888999999999999999999999999999999988888888777777777766665432
Q ss_pred H---HHHHHH-HHHHhhcCCCCCCcccHHH-HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccc
Q 000522 1136 I---ISFIAT-MAVIGSRGNLPATFSTPGL-VGLALS---YAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEEL 1207 (1445)
Q Consensus 1136 ~---~~~~~~-~~v~~~~~~~~~~~~~~g~-vgl~l~---~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~ 1207 (1445)
. +..+.. ..++...+ ...+..+.|. ++..+. +...+..++..+...+.++.+..++.+|+.++.+.++|..
T Consensus 336 ~~~~~~~~~~g~~~~~~~~-~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~ 414 (659)
T TIGR00954 336 TWSAVGLVAVSIPIFDKTH-PAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVK 414 (659)
T ss_pred HHHHHHHHHHHHHHHhccc-ccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 111111 11111110 0012334443 332333 3566788899999999999999999999999997644321
Q ss_pred cc--------CCCC--------------CCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHH
Q 000522 1208 CG--------YQSL--------------SPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSS 1265 (1445)
Q Consensus 1208 ~~--------~~~~--------------~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKST 1265 (1445)
.. .... .......+.|+++||+++|+++ +++|+|+||+|++||++||+|+|||||||
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i~~Ge~~~IvG~nGsGKST 493 (659)
T TIGR00954 415 SGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEVPSGNHLLICGPNGCGKSS 493 (659)
T ss_pred cccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEECCCCEEEEECCCCCCHHH
Confidence 00 0000 0001134679999999999643 46999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCC--------CCCChHHHHHHHHHcc
Q 000522 1266 ILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF--------HMNDDLKIWSVLEKCH 1337 (1445)
Q Consensus 1266 Ll~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~--------~~~sd~ei~~aL~~~~ 1337 (1445)
|+++|.|+++|++|+|.+|+ |+++++|||+|.+|++|+|||+... ...++++++++++.++
T Consensus 494 Ll~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~ 562 (659)
T TIGR00954 494 LFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQ 562 (659)
T ss_pred HHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcC
Confidence 99999999999999999874 6789999999999999999999753 2356788999999999
Q ss_pred HHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccCh
Q 000522 1338 VKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRI 1416 (1445)
Q Consensus 1338 l~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl 1416 (1445)
+.++++.- |+|+..+ .+.+||||||||++||||++++|+++|||||||+||+++++.+++.+++. ++|+|+||||+
T Consensus 563 l~~~~~~~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l~~~--~~tvI~isH~~ 639 (659)
T TIGR00954 563 LTHILEREGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLCREF--GITLFSVSHRK 639 (659)
T ss_pred CHHHHhhcCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHc--CCEEEEEeCch
Confidence 99988766 9999876 46699999999999999999999999999999999999999999999874 89999999999
Q ss_pred hHHhhcCEEEEEeC
Q 000522 1417 STVLNMDEILILDH 1430 (1445)
Q Consensus 1417 ~ti~~~DrI~Vl~~ 1430 (1445)
+++..||+|++|+.
T Consensus 640 ~~~~~~d~il~l~~ 653 (659)
T TIGR00954 640 SLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHhCCEEEEEeC
Confidence 99999999999973
No 95
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.4e-53 Score=584.81 Aligned_cols=483 Identities=18% Similarity=0.211 Sum_probs=360.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHh
Q 000522 339 YSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQV 417 (1445)
Q Consensus 339 ~~~~~~r~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL~~~l 417 (1445)
..+...+.+.+....+...+|++.++.+...+...+.|+++|.++.|++.+..... .+..+....+.+++.+.++....
T Consensus 945 ~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~ 1024 (1490)
T TIGR01271 945 RGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQ 1024 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666777788888889999999999998889999999999999999987553 44555555555555555444443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH
Q 000522 418 KFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTR 497 (1445)
Q Consensus 418 g~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~ 497 (1445)
++.+++.++++++.+.+..+..+..+..++.....+....+...|.++|+.+||.||+|+.+.++..+.-+...+.....
T Consensus 1025 p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~ 1104 (1490)
T TIGR01271 1025 PYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLY 1104 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 44333333333333444445555555566667777788899999999999999999999999888877644322221111
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 000522 498 KYLDAWCVFFWAT-TPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCS 576 (1445)
Q Consensus 498 ~~~~~~~~~~~~~-~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~ 576 (1445)
.....+....... ...++..+.+ ..+.....+++.+-.++++...+..++..+...+..+..+.+|.+||.+|++.+
T Consensus 1105 ~~~~~wl~~~~~~i~~~~~~~~~~--l~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~ 1182 (1490)
T TIGR01271 1105 LSTLRWFQMRIDIIFVFFFIAVTF--IAIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLP 1182 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1111121111111 1011111111 111112345666666677777888899988889999999999999999999765
Q ss_pred CcchhhhhhcCCC-----CcccCCCc-cCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcH
Q 000522 577 EYKHELEQAANSP-----SYISNGLS-NFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGK 650 (1445)
Q Consensus 577 e~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGK 650 (1445)
+..+......... ........ ..-+..+.|+++|++|+|+++. +++|+|+||+|++||.++|||++||||
T Consensus 1183 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~----~~vL~~is~~I~~GekvaIvGrSGsGK 1258 (1490)
T TIGR01271 1183 QEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAG----RAVLQDLSFSVEGGQRVGLLGRTGSGK 1258 (1490)
T ss_pred CccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCC----cceeeccEEEEcCCCEEEEECCCCCCH
Confidence 4322100000000 00000000 0012346799999999997532 346999999999999999999999999
Q ss_pred HHHHHHHhcCccCCCeEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHh
Q 000522 651 SSLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDIS 717 (1445)
Q Consensus 651 Stll~~l~g~~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~ 717 (1445)
|||+++|+|.++ .+|+|.++| +|+|+||+|.||+|||||||....++++++..++++.|+|.+.+.
T Consensus 1259 STLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~ 1337 (1490)
T TIGR01271 1259 STLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIE 1337 (1490)
T ss_pred HHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHH
Confidence 999999999997 799999987 599999999999999999998666788999999999999999999
Q ss_pred hccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhh
Q 000522 718 LMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI 797 (1445)
Q Consensus 718 ~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l 797 (1445)
.+|+|.+|.|||+|.+||||||||++||||++++|+|+|||||||+||+++.+.|.+. +.. ..+++|+|+||||++.+
T Consensus 1338 ~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~-L~~-~~~~~TvI~IaHRl~ti 1415 (1490)
T TIGR01271 1338 QFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKT-LKQ-SFSNCTVILSEHRVEAL 1415 (1490)
T ss_pred hCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHH
Confidence 9999999999999999999999999999999999999999999999999999998876 443 45789999999999999
Q ss_pred hhCCEEEEEeCCEEEEecCHhHHHhccccCccc
Q 000522 798 SAADMVVVMDKGQVKWIGSSADLAVSLYSGFWS 830 (1445)
Q Consensus 798 ~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~ 830 (1445)
..+|+|++|++|+|++.|+++++++.++.+.++
T Consensus 1416 ~~~DrIlvL~~G~ivE~g~p~~Ll~~~~~f~~l 1448 (1490)
T TIGR01271 1416 LECQQFLVIEGSSVKQYDSIQKLLNETSLFKQA 1448 (1490)
T ss_pred HhCCEEEEEECCEEEEeCCHHHHHcCCcHHHHH
Confidence 999999999999999999999998755555444
No 96
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=6.8e-56 Score=555.60 Aligned_cols=195 Identities=22% Similarity=0.309 Sum_probs=162.7
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++|++++|+. ..|+++||+|++||++||+|+||||||||+++|.|+++|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 5899999999964 25999999999999999999999999999999999999999999986 1599
Q ss_pred EEcCCCccc-CccHHHhcCCCC-CCC-hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1302 VVPQSPFLF-EGSLRDNLDPFH-MND-DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1302 ~VpQdp~lF-~gTIReNLdp~~-~~s-d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
|+||++.++ +.|+++|+.... ... +....++++ .+|++.........||||||||++|||||+++|+|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~---------~l~l~~~~~~~~~~LSGGe~QRvaiAraL~~~p~l 474 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIK---------PLQLERLLDKNVKDLSGGELQRVAIAACLSRDADL 474 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHH---------HCCCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 999998754 569999986431 111 222333333 34555445556668999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||||||++||.++...+.+.|++.. .++|+|+|+|+++.+.. ||||++|+ |++...|+..+|
T Consensus 475 lLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~-~~~~~~g~~~~~ 540 (590)
T PRK13409 475 YLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFE-GEPGKHGHASGP 540 (590)
T ss_pred EEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEc-CcceeeeecCCc
Confidence 99999999999999999999998864 37899999999998875 89999996 588888875544
No 97
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=1.4e-52 Score=529.26 Aligned_cols=508 Identities=17% Similarity=0.155 Sum_probs=362.1
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAG-PLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLK 347 (1445)
Q Consensus 269 l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~-P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~ 347 (1445)
+++-+++.+++.++..+++.++..++.+.. |++.+.+++.+... ....+.+++.+++. .++.....+...+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 76 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADTS--LLVLPEFLGLLLLL----MAVTLGSQLALTTLG 76 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--chHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 566777888888888888889988888874 77878888765321 11111111111111 223344556667778
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHH
Q 000522 348 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 427 (1445)
Q Consensus 348 ~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~ 427 (1445)
.++...+...+|+|.++++.....+.+.|+++|.++.|++.+......+..++...+.+++++++++..-...+++.+++
T Consensus 77 ~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~ 156 (547)
T PRK10522 77 HHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTAIW 156 (547)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 88888899999999999999888888999999999999999987655566677777776666555544333333444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 428 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYG--WEQIFSSWLMKTRSSEVKHLSTRKYLDAWCV 505 (1445)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g--~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~ 505 (1445)
+++.+.+..++.++..+..++..+..+++.+.+.|.++|++++++.+ .++.+.++..+..++-.+...+.........
T Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (547)
T PRK10522 157 MAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSAV 236 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 44445566777888888888999999999999999999999997433 2234444444432222111112111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCC---CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhh
Q 000522 506 FFWATTPTLFSLFTFGLFALMGH---QLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHEL 582 (1445)
Q Consensus 506 ~~~~~~~~~~~~~~f~~~~~~~~---~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~ 582 (1445)
.+.. +...+.++.+.+.++ ..+.+.+.+...+...+..|+..+...++.+.++..+.+|+.+++..++..+..
T Consensus 237 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~~ 312 (547)
T PRK10522 237 NWSN----IMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEFP 312 (547)
T ss_pred HHHH----HHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 1111 111111222222211 122222222222333466899999999999999999999999998654321100
Q ss_pred hhhcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCcc
Q 000522 583 EQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM 662 (1445)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~ 662 (1445)
. ..+ .+....++++|++|+|+.+ + ++|+|+||++++|+.++|+||||||||||+++|+|+++
T Consensus 313 -~--~~~----------~~~~~~i~~~~v~f~y~~~--~---~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~ 374 (547)
T PRK10522 313 -R--PQA----------FPDWQTLELRNVTFAYQDN--G---FSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQ 374 (547)
T ss_pred -c--ccc----------cCcCceEEEEEEEEEeCCC--C---eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC
Confidence 0 000 0112469999999999732 2 35999999999999999999999999999999999999
Q ss_pred CCCeEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccC
Q 000522 663 LTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGE 729 (1445)
Q Consensus 663 ~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~ 729 (1445)
|++|+|.++| +++||+|+|.+|++|++|| +...+++..+++++.+++..++.. ++|. .
T Consensus 375 ~~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~ 445 (547)
T PRK10522 375 PQSGEILLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----I 445 (547)
T ss_pred CCCeEEEECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----C
Confidence 9999999876 5999999999999999999 455677788888888888776652 3331 2
Q ss_pred CCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhhCCEEEEEeC
Q 000522 730 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDK 808 (1445)
Q Consensus 730 ~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~~d~i~~l~~ 808 (1445)
+|.+||||||||++||||++++|++++||||||+||+++++.+.+.+ ..... +++|+|+|||+++.+..||+|++|++
T Consensus 446 ~G~~LSgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l-~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~ 524 (547)
T PRK10522 446 SNLKLSKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVL-LPLLQEMGKTIFAISHDDHYFIHADRLLEMRN 524 (547)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHH-HHHHHhCCCEEEEEEechHHHHhCCEEEEEEC
Confidence 48899999999999999999999999999999999999999888763 22121 47899999999999999999999999
Q ss_pred CEEEEe
Q 000522 809 GQVKWI 814 (1445)
Q Consensus 809 G~i~~~ 814 (1445)
|++++.
T Consensus 525 G~i~e~ 530 (547)
T PRK10522 525 GQLSEL 530 (547)
T ss_pred CEEEEe
Confidence 999875
No 98
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.1e-53 Score=520.42 Aligned_cols=477 Identities=22% Similarity=0.290 Sum_probs=330.7
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--eEEEEcCCCC
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPW 682 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~p~ 682 (1445)
.+.++|++.+|.. +++++|+||++.+|+.+++||+|||||||||++|.|+..|++|+|...+ ++||++|+|.
T Consensus 3 ~i~~~~ls~~~g~------~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~ 76 (530)
T COG0488 3 MITLENLSLAYGD------RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPP 76 (530)
T ss_pred eEEEeeeEEeeCC------ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCC
Confidence 4778899999842 3459999999999999999999999999999999999999999999986 7999999999
Q ss_pred CCCc-cHHHHHhcCCCC-C--hhhHHHHHH---------------------HhcchHHHhhccCC--CcccccCCCCccc
Q 000522 683 ILSG-TIRDNILFGKNY-D--PQSYSETLK---------------------ACTLDVDISLMVGG--DMAYIGEKGVNLS 735 (1445)
Q Consensus 683 l~~~-ti~~nI~~g~~~-~--~~~~~~v~~---------------------~~~l~~d~~~~~~g--d~t~vg~~g~~LS 735 (1445)
.... ||+|.+.-+... . ...|+++.. ....+.++...-.| .... .....+||
T Consensus 77 ~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~LS 155 (530)
T COG0488 77 LDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSSLS 155 (530)
T ss_pred cCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhhcC
Confidence 9866 999999876421 0 011111111 11112222221111 1111 34557899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEE-E
Q 000522 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK-W 813 (1445)
Q Consensus 736 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~-~ 813 (1445)
||||.||+|||||..+||+|||||||++||..+..++-+.+ . ..+| |+|+||||.++|.. |++|+.++.|++. +
T Consensus 156 GG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L-~--~~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y 231 (530)
T COG0488 156 GGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYL-K--RYPG-TVIVVSHDRYFLDNVATHILELDRGKLTPY 231 (530)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHH-H--hCCC-cEEEEeCCHHHHHHHhhheEEecCCceeEe
Confidence 99999999999999999999999999999999999988763 2 2345 99999999999998 9999999999765 5
Q ss_pred ecCHhHHHhccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcCccchhhHHHHH
Q 000522 814 IGSSADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYA 893 (1445)
Q Consensus 814 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~ 893 (1445)
.|.|+...+.... . . ..+ .. ... ..+++.+ .
T Consensus 232 ~Gny~~~~~~r~~-----------------~-~------~~~----~~-------~~~-~~~~~~~-~------------ 262 (530)
T COG0488 232 KGNYSSYLEQKAE-----------------R-L------RQE----AA-------AYE-KQQKELA-K------------ 262 (530)
T ss_pred cCCHHHHHHHHHH-----------------H-H------HHH----HH-------HHH-HHHHHHH-H------------
Confidence 6777766432100 0 0 000 00 000 0000000 0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 894 KFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVK 973 (1445)
Q Consensus 894 ~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~ 973 (1445)
+..|+..
T Consensus 263 ----------------------------~~~~i~r--------------------------------------------- 269 (530)
T COG0488 263 ----------------------------EQEWIRR--------------------------------------------- 269 (530)
T ss_pred ----------------------------HHHHHHH---------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHH
Q 000522 974 VHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYS 1053 (1445)
Q Consensus 974 lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~ 1053 (1445)
+.
T Consensus 270 ----------------------------~~-------------------------------------------------- 271 (530)
T COG0488 270 ----------------------------GK-------------------------------------------------- 271 (530)
T ss_pred ----------------------------HH--------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 000522 1054 KLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLA 1133 (1445)
Q Consensus 1054 ~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~ 1133 (1445)
...+++++.
T Consensus 272 ----~~~~~~k~a------------------------------------------------------------------- 280 (530)
T COG0488 272 ----AAASKAKKA------------------------------------------------------------------- 280 (530)
T ss_pred ----hccchHHHH-------------------------------------------------------------------
Confidence 000000000
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hcCCccccc-c-
Q 000522 1134 AFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY--MDVPQEELC-G- 1209 (1445)
Q Consensus 1134 ~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~--~~~~~e~~~-~- 1209 (1445)
+......+|+.+- ...+.+... .
T Consensus 281 -----------------------------------------------------~sr~k~l~k~~~~~~~~~~~~~~~~~~ 307 (530)
T COG0488 281 -----------------------------------------------------KSRIKRLEKLEARLAEERPVEEGKPLA 307 (530)
T ss_pred -----------------------------------------------------HHHHHHHHHHHhhhhhcccccccccce
Confidence 0000011111100 000010000 0
Q ss_pred -CCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeC
Q 000522 1210 -YQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNI 1288 (1445)
Q Consensus 1210 -~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di 1288 (1445)
...+++.-+.+-.++++|+++.|.++ .++++++||.|.+|++|||+||+|+|||||+++|.|...|.+|+|.+.-
T Consensus 308 ~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~--- 383 (530)
T COG0488 308 FRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGE--- 383 (530)
T ss_pred eeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCC---
Confidence 00111111224479999999999765 6799999999999999999999999999999999999999999998843
Q ss_pred CCCChHhhhcceEEEcCCC-cccC-ccHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000522 1289 INTPVRDLRGRFAVVPQSP-FLFE-GSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1445)
Q Consensus 1289 ~~i~~~~lR~~i~~VpQdp-~lF~-gTIReNLdp~~-~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1365 (1445)
.-++||.+|+- .++. .|+-+++.... ...+.++...|.+.++...- +......||||||-|
T Consensus 384 --------~v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~--------~~~~v~~LSGGEk~R 447 (530)
T COG0488 384 --------TVKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGED--------QEKPVGVLSGGEKAR 447 (530)
T ss_pred --------ceEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChHH--------HhCchhhcCHhHHHH
Confidence 13699999998 3443 38888886544 22367777777776654321 122334699999999
Q ss_pred HHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeee-cCC
Q 000522 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHC-GCA 1439 (1445)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~-G~p 1439 (1445)
+.||+.++.+|.+|||||||..||.+|-+.+.++|.++ + -|||+|||+...+.. |++|+++++ ++.++ |.+
T Consensus 448 l~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f-~-Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y 520 (530)
T COG0488 448 LLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF-E-GTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGY 520 (530)
T ss_pred HHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC-C-CeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCH
Confidence 99999999999999999999999999999999999864 4 499999999999987 799999998 77777 543
No 99
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.5e-53 Score=500.02 Aligned_cols=437 Identities=25% Similarity=0.338 Sum_probs=333.5
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1445)
..++++|++=+|+. .++|+|+||++.+||+++++|.||+|||||+|.|.|.++|++|+|.++|
T Consensus 7 ~ll~~~~i~K~Fgg------V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A 80 (500)
T COG1129 7 PLLELRGISKSFGG------VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDA 80 (500)
T ss_pred ceeeeecceEEcCC------ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHH
Confidence 45788999888753 2459999999999999999999999999999999999999999999997
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCCCC-------hhh----HHHHHHHhcchHHHhhccCCCcccccCCCCccchH
Q 000522 673 ---SIAYVPQVPWILS-GTIRDNILFGKNYD-------PQS----YSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~~~-------~~~----~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGG 737 (1445)
.|+.|.|++-|++ -||.|||.+|++.. ... .+++++..++..| ......+||+|
T Consensus 81 ~~~GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~lg~~~~-----------~~~~v~~Lsia 149 (500)
T COG1129 81 LAAGIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARLGLDID-----------PDTLVGDLSIA 149 (500)
T ss_pred HhCCcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHcCCCCC-----------hhhhhhhCCHH
Confidence 4999999999875 59999999887532 222 2233333333211 23445689999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecC
Q 000522 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 816 (1445)
Q Consensus 738 QkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~ 816 (1445)
|||-|+||||++.+++|+|||||||+|+.+..+++|+. +.....+|.++|+|||+++++.. ||+|.||+||+.+..++
T Consensus 150 qrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~-ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~ 228 (500)
T COG1129 150 QRQMVEIARALSFDARVLILDEPTAALTVKETERLFDL-IRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRP 228 (500)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecc
Confidence 99999999999999999999999999999999999986 44435578999999999998776 99999999999875433
Q ss_pred H-hHHHhccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcCccchhhHHHHHhh
Q 000522 817 S-ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKF 895 (1445)
Q Consensus 817 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~ 895 (1445)
. .++ +.++.. .
T Consensus 229 ~~~~~------------------------------------------------~~~~lv----------~---------- 240 (500)
T COG1129 229 TAAET------------------------------------------------SEDELV----------R---------- 240 (500)
T ss_pred cccCC------------------------------------------------CHHHHH----------H----------
Confidence 1 110 000000 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 896 SGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVH 975 (1445)
Q Consensus 896 ~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh 975 (1445)
+.
T Consensus 241 -----------------------------~M------------------------------------------------- 242 (500)
T COG1129 241 -----------------------------LM------------------------------------------------- 242 (500)
T ss_pred -----------------------------Hh-------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000522 976 NTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKL 1055 (1445)
Q Consensus 976 ~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i 1055 (1445)
+|
T Consensus 243 -------------------vG----------------------------------------------------------- 244 (500)
T COG1129 243 -------------------VG----------------------------------------------------------- 244 (500)
T ss_pred -------------------hC-----------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 000522 1056 QFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAF 1135 (1445)
Q Consensus 1056 ~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~ 1135 (1445)
|++.
T Consensus 245 --------r~~~-------------------------------------------------------------------- 248 (500)
T COG1129 245 --------RELE-------------------------------------------------------------------- 248 (500)
T ss_pred --------cchh--------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCC
Q 000522 1136 IISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSP 1215 (1445)
Q Consensus 1136 ~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~ 1215 (1445)
+..++. +.
T Consensus 249 -----------------------------------------------------------------~~~~~~-------~~ 256 (500)
T COG1129 249 -----------------------------------------------------------------DLFPEP-------PE 256 (500)
T ss_pred -----------------------------------------------------------------hhcccc-------cc
Confidence 000000 00
Q ss_pred CCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCC-hH
Q 000522 1216 DWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VR 1294 (1445)
Q Consensus 1216 ~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~ 1294 (1445)
.-+..-.++++|++.. ..++|+||++++||.+||.|--|||+|-++.+|+|.-++.+|+|.+||.++.--+ .+
T Consensus 257 ~~~~~~~l~v~~l~~~------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v~~~sp~~ 330 (500)
T COG1129 257 EGIGEPVLEVRNLSGG------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPVRIRSPRD 330 (500)
T ss_pred cCCCCcEEEEecCCCC------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEccCCCHHH
Confidence 0011124677777642 2589999999999999999999999999999999999999999999999886655 55
Q ss_pred hhhcceEEEcCCCc---cc-CccHHHhcCCCC--CCChH-HHHHHHHHccHHHHHHhC-----CCchhhhcCCCCCChhH
Q 000522 1295 DLRGRFAVVPQSPF---LF-EGSLRDNLDPFH--MNDDL-KIWSVLEKCHVKEEVEAV-----GLETFVKESGISFSVGQ 1362 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~---lF-~gTIReNLdp~~--~~sd~-ei~~aL~~~~l~~~i~~l-----gLdt~v~e~G~~LSgGQ 1362 (1445)
..+..|+|||-|-- +| .-+|++|+.... .++.. -+...-++.-..++++.+ +.+..+ .+||||.
T Consensus 331 Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v----~~LSGGN 406 (500)
T COG1129 331 AIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPI----GTLSGGN 406 (500)
T ss_pred HHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchh----hcCCchh
Confidence 88889999999874 44 559999986431 11100 133334444455667766 344444 3799999
Q ss_pred HHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCC
Q 000522 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAA 1440 (1445)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~ 1440 (1445)
+|+++|||.|..+|+||||||||.++|..+.+.|.+.|++.. +|.+||+|+-.++.+. .||||+||.+|+++..=+..
T Consensus 407 QQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri~~e~~~~ 486 (500)
T COG1129 407 QQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRIVGELDRE 486 (500)
T ss_pred hhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEEEEEeccc
Confidence 999999999999999999999999999999999999999875 6899999999999987 69999999999998754443
No 100
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=7.3e-50 Score=510.80 Aligned_cols=516 Identities=16% Similarity=0.171 Sum_probs=376.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 280 PYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGYVLAIALGLTSILKSFFDTQYSFHLSKLKLKLRSSIMTIIY 359 (1445)
Q Consensus 280 ~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~ir~~L~~~iy 359 (1445)
.++...++.++.+++....|++++.+++.+.+.+... -...++.++++.++.+++.....|...++..++|..+...++
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~-f~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~ 175 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRN-FAWILFKWFLIAPPASFINSAIKYLLKELKLRFRVRLTRYLY 175 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677888888999999999999999876432111 111111222233334444444555566666777777777766
Q ss_pred HHHhcC----CccccCCCChhHHHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhHhHHHH-HHHHHHHHHHHH
Q 000522 360 QKCLYV----RLAERSEFSDGEIQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALYLLYTQVKFAF-VSGLAITILLIP 433 (1445)
Q Consensus 360 ~K~L~l----~~~~~~~~~~g~i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~lL~~~lg~a~-l~~~~~~~~~~~ 433 (1445)
++.++. +....++ ..|++.+.+++|++.+.+... .+..+...++.++.+++.++..++|.. ++.++.+++...
T Consensus 176 ~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l~~~ 254 (659)
T TIGR00954 176 SKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFATGV 254 (659)
T ss_pred HHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 666653 2222232 579999999999999988654 456666777777777777776666643 333444455566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000522 434 VNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFWATTP- 512 (1445)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~- 512 (1445)
+..++.+++.+..++..+..++-.+..+|.++|+++||+|+.|+.+.+++++.-++-.+...+.....+....+.....
T Consensus 255 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~ 334 (659)
T TIGR00954 255 VLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNIVAK 334 (659)
T ss_pred HHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 6777888888999999999999999999999999999999999998888877655555555555555544433332222
Q ss_pred ---HHHHHHHHHHHHHh-C----CCCCHhHHHH-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcch
Q 000522 513 ---TLFSLFTFGLFALM-G----HQLDAAMVFT-C---LALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH 580 (1445)
Q Consensus 513 ---~~~~~~~f~~~~~~-~----~~Lt~~~~ft-~---l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~ 580 (1445)
..+..+..+...+. . +.+|.+..+. . ..++..+..|+..+...+..+.++.++.+||.++++.++..+
T Consensus 335 ~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~~~~ 414 (659)
T TIGR00954 335 YTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLDDVK 414 (659)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22222223332222 2 5688876544 2 334677789999999999999999999999999996532111
Q ss_pred hhh-hhcCCCC-----------cccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCC
Q 000522 581 ELE-QAANSPS-----------YISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGS 648 (1445)
Q Consensus 581 ~~~-~~~~~~~-----------~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~Gs 648 (1445)
... .....+. ....+..........++++|++|.|+.+ +++|+|+||++++||.++|+|||||
T Consensus 415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-----~~il~~isl~i~~Ge~~~IvG~nGs 489 (659)
T TIGR00954 415 SGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-----DVLIESLSFEVPSGNHLLICGPNGC 489 (659)
T ss_pred cccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-----CeeeecceEEECCCCEEEEECCCCC
Confidence 000 0000000 0000000011123469999999988632 2359999999999999999999999
Q ss_pred cHHHHHHHHhcCccCCCeEEEEcC--eEEEEcCCCCCCCccHHHHHhcCC--------CCChhhHHHHHHHhcchHHHhh
Q 000522 649 GKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPWILSGTIRDNILFGK--------NYDPQSYSETLKACTLDVDISL 718 (1445)
Q Consensus 649 GKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~p~l~~~ti~~nI~~g~--------~~~~~~~~~v~~~~~l~~d~~~ 718 (1445)
|||||+++|+|+++|++|+|.+++ .++||+|+|+++++|++|||.++. ..++++..++++.+++++.++.
T Consensus 490 GKSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~ 569 (659)
T TIGR00954 490 GKSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER 569 (659)
T ss_pred CHHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh
Confidence 999999999999999999998864 699999999999999999999874 2345677889999999887776
Q ss_pred ccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhh
Q 000522 719 MVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS 798 (1445)
Q Consensus 719 ~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~ 798 (1445)
|.|.+|..+ .+.+||||||||++||||++++|++++||||||+||+++++.+.+.+ .. .++|+|++||+++.++
T Consensus 570 -~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~~l-~~---~~~tvI~isH~~~~~~ 643 (659)
T TIGR00954 570 -EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYRLC-RE---FGITLFSVSHRKSLWK 643 (659)
T ss_pred -cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHH-HH---cCCEEEEEeCchHHHH
Confidence 899999876 56799999999999999999999999999999999999999988763 22 3789999999999999
Q ss_pred hCCEEEEEeC
Q 000522 799 AADMVVVMDK 808 (1445)
Q Consensus 799 ~~d~i~~l~~ 808 (1445)
.||++++|+.
T Consensus 644 ~~d~il~l~~ 653 (659)
T TIGR00954 644 YHEYLLYMDG 653 (659)
T ss_pred hCCEEEEEeC
Confidence 9999999973
No 101
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-50 Score=453.94 Aligned_cols=464 Identities=20% Similarity=0.268 Sum_probs=355.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhHhHHHHHHHH
Q 000522 347 KLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYLLYTQVKFAFVSGL 425 (1445)
Q Consensus 347 ~~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~-~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~ 425 (1445)
+......+.-..|.+++.|+.....+..+|.+..-+.--...|....++ +..+....++++++..++++..||......
T Consensus 10 ~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~~t 89 (497)
T COG5265 10 GQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFALTT 89 (497)
T ss_pred HHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHHHH
Confidence 3334445666778888888887766666676655554444455554443 445556678999999999999998766655
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCchHHHHHHHHHHHHH----HHHHHHHHHHH
Q 000522 426 AITILLIPVNKW-IANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSS----EVKHLSTRKYL 500 (1445)
Q Consensus 426 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e~~~~~~i~~~R~~----El~~~~~~~~~ 500 (1445)
++++++..+-.+ +...-...+++.+++-.+......+.|-+-.++|.||-|+.+..+..+..+. +++......++
T Consensus 90 ~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~~L 169 (497)
T COG5265 90 LVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLLVL 169 (497)
T ss_pred HHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHHHH
Confidence 555544433322 2233333444455555556677779999999999999999888777655432 22222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcch
Q 000522 501 DAWCVFFWATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH 580 (1445)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~ 580 (1445)
......+... .+....+.+...+..+.+|.+...-.-++...+..|++.+......+.+++...+++.+.+..+-...
T Consensus 170 n~gQ~~I~~~--~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~ 247 (497)
T COG5265 170 NFGQTAIFST--GLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVS 247 (497)
T ss_pred HHhhHHHHHH--HHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhc
Confidence 1111111111 11222333444456789999999999999999999999999999999999999999988886542211
Q ss_pred hhhhhcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcC
Q 000522 581 ELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGE 660 (1445)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~ 660 (1445)
... ..+.. .....+.+.|++++|.|.++ +++|+++||++++|+.++|||++|+||||+++.|.++
T Consensus 248 d~p---da~~L-------~~~~~g~v~F~~V~F~y~~~-----r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRF 312 (497)
T COG5265 248 DAP---DAPPL-------WPVRLGAVAFINVSFAYDPR-----RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRF 312 (497)
T ss_pred cCC---CCccc-------cccccceEEEEEEEeecccc-----chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHH
Confidence 100 01110 00234679999999999753 4559999999999999999999999999999999999
Q ss_pred ccCCCeEEEEcC-------------eEEEEcCCCCCCCccHHHHHhcCCCC-ChhhHHHHHHHhcchHHHhhccCCCccc
Q 000522 661 MMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAY 726 (1445)
Q Consensus 661 ~~~~~G~i~~~~-------------~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~d~~~~~~gd~t~ 726 (1445)
+++.+|.|.++| .||.|||+..|||.|+..||.+|++. .++...++.++.++.+.++.+|+|++|.
T Consensus 313 yD~~sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~ 392 (497)
T COG5265 313 YDVNSGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTG 392 (497)
T ss_pred hCCcCceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcc
Confidence 999999999998 49999999999999999999999874 5677888999999999999999999999
Q ss_pred ccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEE
Q 000522 727 IGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVM 806 (1445)
Q Consensus 727 vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l 806 (1445)
|||+|-.||||+|||||+||++.++|+|++|||+|||||.+|++.|... +.. ..+|+|.+++.||++.+-.||.|+||
T Consensus 393 VgerglklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~-l~~-~~~~rttlviahrlsti~~adeiivl 470 (497)
T COG5265 393 VGERGLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAA-LRE-VSAGRTTLVIAHRLSTIIDADEIIVL 470 (497)
T ss_pred cchheeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHH-HHH-HhCCCeEEEEeehhhhccCCceEEEe
Confidence 9999999999999999999999999999999999999999999998776 433 56899999999999999999999999
Q ss_pred eCCEEEEecCHhHHHhccccCcc
Q 000522 807 DKGQVKWIGSSADLAVSLYSGFW 829 (1445)
Q Consensus 807 ~~G~i~~~g~~~~~~~~~~~~~~ 829 (1445)
++|+|+|.|+++|+++.++.+.+
T Consensus 471 ~~g~i~erg~h~~ll~~~g~ya~ 493 (497)
T COG5265 471 DNGRIVERGTHEELLAAGGLYAE 493 (497)
T ss_pred eCCEEEecCcHHHHHHcCChHHH
Confidence 99999999999999988766543
No 102
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.8e-50 Score=466.05 Aligned_cols=443 Identities=26% Similarity=0.368 Sum_probs=343.7
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1445)
..+++++.+-.|+. -.+++||||++++||+.++.|.||+|||||++.|.|.++|++|+|.++|
T Consensus 3 ~~l~~~~itK~f~~------~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA 76 (501)
T COG3845 3 PALEMRGITKRFPG------VVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDA 76 (501)
T ss_pred ceEEEeccEEEcCC------EEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHH
Confidence 46788888888762 2459999999999999999999999999999999999999999999998
Q ss_pred ---eEEEEcCCCCCCCc-cHHHHHhcCCCC------C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000522 673 ---SIAYVPQVPWILSG-TIRDNILFGKNY------D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~------~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQ 738 (1445)
.||+|.|++-|++. ||.|||..|.+- | .++.++..+.++|+-|.+ .+...||=|+
T Consensus 77 ~~~GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~yGl~vdp~-----------~~V~dLsVG~ 145 (501)
T COG3845 77 IRLGIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERYGLPVDPD-----------AKVADLSVGE 145 (501)
T ss_pred HHcCCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHhCCCCCcc-----------ceeecCCcch
Confidence 49999999999876 999999998753 2 245667777777776653 3456899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCH
Q 000522 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 817 (1445)
Q Consensus 739 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~ 817 (1445)
||||.|-+|||++|+++|||||||.|-|...+++|+. +......|+|||+|||+++.+.. ||++-||++|+++.. .
T Consensus 146 qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~-l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt--~ 222 (501)
T COG3845 146 QQRVEILKALYRGARLLILDEPTAVLTPQEADELFEI-LRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGT--V 222 (501)
T ss_pred hHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEee--e
Confidence 9999999999999999999999999999999999986 33324569999999999999876 999999999997532 1
Q ss_pred hHHHhccccCcccccccchhhhhhhhhhhccccchhhhhhhhhcccccCCchhhHHHHHHHHhcCccchhhHHHHHhhhh
Q 000522 818 ADLAVSLYSGFWSTNEFDTSLHMQKQEMRTNASSANKQILLQEKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG 897 (1445)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g 897 (1445)
+.. + +. +. +|-
T Consensus 223 ~~~-----------~---------------------------~~-------t~-----~el------------------- 233 (501)
T COG3845 223 DPV-----------A---------------------------ET-------TE-----EEL------------------- 233 (501)
T ss_pred cCC-----------C---------------------------CC-------CH-----HHH-------------------
Confidence 100 0 00 00 000
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhHhhhhhcccCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 898 WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNT 977 (1445)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ 977 (1445)
.- ++
T Consensus 234 ---------a~-lM------------------------------------------------------------------ 237 (501)
T COG3845 234 ---------AE-LM------------------------------------------------------------------ 237 (501)
T ss_pred ---------HH-Hh------------------------------------------------------------------
Confidence 00 00
Q ss_pred HHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 978 LLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQF 1057 (1445)
Q Consensus 978 ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~ 1057 (1445)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 000522 1058 FYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFII 1137 (1445)
Q Consensus 1058 ~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~ 1137 (1445)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCC
Q 000522 1138 SFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDW 1217 (1445)
Q Consensus 1138 ~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~w 1217 (1445)
+ + ... . .+.+ .++.-
T Consensus 238 -------v-G--~~v--~----------------------------------------------~~~~-------~~~~~ 252 (501)
T COG3845 238 -------V-G--REV--V----------------------------------------------LRVV-------KPPST 252 (501)
T ss_pred -------c-C--Ccc--c----------------------------------------------cccc-------cCCCC
Confidence 0 0 000 0 0000 01111
Q ss_pred CCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeC-CCCChHhh
Q 000522 1218 PFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNI-INTPVRDL 1296 (1445)
Q Consensus 1218 p~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di-~~i~~~~l 1296 (1445)
|..-.++++|++..-+.+ -+.+++|||++++||.+||.|-.|-|-|-|+.+|.|+..|.+|+|.++|.|+ ...+....
T Consensus 253 pg~~vL~V~~L~v~~~~~-~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~~~~~~~~ 331 (501)
T COG3845 253 PGEVVLEVEDLSVKDRRG-VTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLGRLSPRER 331 (501)
T ss_pred CCCeEEEEeeeEeecCCC-CceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccccCCHHHH
Confidence 233468999999865433 3689999999999999999999999999999999999999999999999997 66777777
Q ss_pred hc-ceEEEcCCCc----ccCccHHHhcCCCCCCCh-----H-HHHHHHHHccHHHHHHhC-----CCchhhhcCCCCCCh
Q 000522 1297 RG-RFAVVPQSPF----LFEGSLRDNLDPFHMNDD-----L-KIWSVLEKCHVKEEVEAV-----GLETFVKESGISFSV 1360 (1445)
Q Consensus 1297 R~-~i~~VpQdp~----lF~gTIReNLdp~~~~sd-----~-ei~~aL~~~~l~~~i~~l-----gLdt~v~e~G~~LSg 1360 (1445)
|+ .+++||.|.. ..+-|+.||+-+.....+ - -=|+++++ ...+.++.. +.++++ .+|||
T Consensus 332 r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~-~a~~li~~fdVr~~~~~~~a----~~LSG 406 (501)
T COG3845 332 RRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRK-FARELIEEFDVRAPSPDAPA----RSLSG 406 (501)
T ss_pred HhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHH-HHHHHHHHcCccCCCCCcch----hhcCC
Confidence 65 5999999994 556799999854322111 0 00112211 123344444 333333 47999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecC
Q 000522 1361 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGC 1438 (1445)
Q Consensus 1361 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~ 1438 (1445)
|+.|++-+||-|.++|++||..+||-+||..+.+.|++.|.+.. +|+.|++|+-.|+.+.. ||||.||.+|+++...+
T Consensus 407 GNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaVi~~Gri~~~~~ 486 (501)
T COG3845 407 GNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAVIYEGRIVGIVP 486 (501)
T ss_pred cceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeeeeeCCceecccc
Confidence 99999999999999999999999999999999999999887664 69999999999999875 89999999999999998
Q ss_pred CCCC
Q 000522 1439 AAAP 1442 (1445)
Q Consensus 1439 p~~~ 1442 (1445)
|++-
T Consensus 487 ~~~~ 490 (501)
T COG3845 487 PEEA 490 (501)
T ss_pred cccC
Confidence 8864
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=6.7e-51 Score=465.34 Aligned_cols=221 Identities=33% Similarity=0.626 Sum_probs=212.8
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
|.|+|+|++++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ .+|+|.+||+|+.+++...+|+++
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5799999999997666679999999999999999999999999999999999998 789999999999999999999999
Q ss_pred EEEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1301 AVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1301 ~~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
+||||+|.+|++|+++|++++...++++++++++.+++.++++.+ +|++.++++|.+||+|||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999988777889999999999999999987 999999999999999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||||||++||+++++.+++.|++.+++||||+||||++++..||||+||++|+++|+|+|+++
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l 223 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKL 223 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHH
Confidence 9999999999999999999999988889999999999999999999999999999999999775
No 104
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-49 Score=460.81 Aligned_cols=224 Identities=26% Similarity=0.381 Sum_probs=200.9
Q ss_pred CCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEECCeeC
Q 000522 1214 SPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNI 1288 (1445)
Q Consensus 1214 ~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di 1288 (1445)
+.+||..|.|+|+|++++|++..+++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.|||+|+
T Consensus 72 ~~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i 151 (329)
T PRK14257 72 KEDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNT 151 (329)
T ss_pred cCCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEc
Confidence 34699999999999999997655679999999999999999999999999999999999997 5799999999999
Q ss_pred C--CCChHhhhcceEEEcCCCcccCccHHHhcCCC---CCCChHHH-----HHHHHHccHHHHHHhCCCchhhhcCCCCC
Q 000522 1289 I--NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF---HMNDDLKI-----WSVLEKCHVKEEVEAVGLETFVKESGISF 1358 (1445)
Q Consensus 1289 ~--~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~---~~~sd~ei-----~~aL~~~~l~~~i~~lgLdt~v~e~G~~L 1358 (1445)
. .++...+|++++||||+|++|++|+++||++. ...++++. .++++.+++++ ++++.+++.|.+|
T Consensus 152 ~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----~l~~~~~~~~~~L 226 (329)
T PRK14257 152 RSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWD-----EVKDDLDKAGNAL 226 (329)
T ss_pred cccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcc-----hhhhhhhCCcccC
Confidence 7 45667899999999999999999999999843 23444444 44566666543 4567889999999
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeec
Q 000522 1359 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1359 SgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G 1437 (1445)
|||||||+|||||++++|+|||||||||+||+++.+.+++.|++.++++|+|+|||+++++.+ ||||+||++|+|+|.|
T Consensus 227 SgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g 306 (329)
T PRK14257 227 SGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAG 306 (329)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999999889999999999999998 9999999999999999
Q ss_pred CCCCC
Q 000522 1438 CAAAP 1442 (1445)
Q Consensus 1438 ~p~~~ 1442 (1445)
+|++.
T Consensus 307 ~~~~l 311 (329)
T PRK14257 307 ETKTI 311 (329)
T ss_pred CHHHH
Confidence 99874
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-45 Score=381.22 Aligned_cols=214 Identities=27% Similarity=0.392 Sum_probs=183.5
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCC-CCChHhhhcce
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII-NTPVRDLRGRF 1300 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~-~i~~~~lR~~i 1300 (1445)
.|+++||+.+|... .||||||++|++||++.||||||||||||+++|.++-+|++|+|.|||.++. ..+...+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 48999999999754 6999999999999999999999999999999999999999999999998774 34789999999
Q ss_pred EEEcCCCcccCc-cHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1445)
|+|+|+.-||+- |+-||+.... ..+.+|-.+ + ..+.++..||......-..+|||||+||+||||||.-+
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~---~--A~~lL~~VGL~~ka~~yP~qLSGGQqQRVAIARALaM~ 154 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEARE---K--ALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMD 154 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHH---H--HHHHHHHcCchhhhhhCccccCcHHHHHHHHHHHHcCC
Confidence 999999999986 9999986431 122222111 1 11223333666666667789999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1376 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|+|+++|||||+||+|.-..+.+++++.. .|.|+|+|||.+...++ +|||+.||+|+|+|.|+|++.
T Consensus 155 P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~ 223 (240)
T COG1126 155 PKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEF 223 (240)
T ss_pred CCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHH
Confidence 99999999999999999999999998875 58899999999999998 599999999999999998764
No 106
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-45 Score=397.27 Aligned_cols=214 Identities=29% Similarity=0.429 Sum_probs=183.7
Q ss_pred EEEEEEEEEeCCC---CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCC---hHhh
Q 000522 1223 IEFQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDL 1296 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---~~~l 1296 (1445)
|+++||++.|+.. ...+|+||||+|++||..||+|+||||||||++++.++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999863 356999999999999999999999999999999999999999999999999987766 5566
Q ss_pred hcceEEEcCCCcccC-ccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1297 RGRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1297 R~~i~~VpQdp~lF~-gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
|++||+|+|++-|++ -|+.+|+.+-- ..+.+|+.+- ..+.++-.||....+.-..+||||||||++|||||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~R-----V~elLelVgL~dk~~~yP~qLSGGQKQRVaIARAL 156 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQR-----VAELLELVGLSDKADRYPAQLSGGQKQRVAIARAL 156 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHH-----HHHHHHHcCChhhhccCchhcCcchhhHHHHHHHH
Confidence 789999999999998 69999996431 2344443221 12222223777777778889999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
..+|+||+.|||||+||++|.+.|.+.+++.- -|-|+++|||.++.+++ ||||.||++|+|+|.|+-.+
T Consensus 157 a~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~ 228 (339)
T COG1135 157 ANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSE 228 (339)
T ss_pred hcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHH
Confidence 99999999999999999999999999987653 48999999999999987 99999999999999998654
No 107
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.9e-45 Score=375.25 Aligned_cols=214 Identities=30% Similarity=0.420 Sum_probs=194.0
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCC-----cEEEECCeeCCC--CCh
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG-----GQILVDGLNIIN--TPV 1293 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~-----G~I~IDG~di~~--i~~ 1293 (1445)
..++++|+++.|.. ..+|+|||++|++++.+|++|||||||||++++|-|+.+..+ |+|.+||.||.+ ++.
T Consensus 6 ~~~~~~~l~~yYg~--~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGD--KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECc--hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 46899999999974 469999999999999999999999999999999999999876 999999999966 689
Q ss_pred HhhhcceEEEcCCCcccCccHHHhcCCCCC-------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1294 ~~lR~~i~~VpQdp~lF~gTIReNLdp~~~-------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
-.||+++|+|.|.|--|+.||+||+.++-+ .-|+.++++|+++.||+.++. .+.+.+..|||||+|||
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-----rL~~sa~~LSGGQQQRL 158 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-----RLHKSALGLSGGQQQRL 158 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-----HhhCCccCCChhHHHHH
Confidence 999999999999999999999999976522 124568889999999998864 45666778999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||||||.-+|+||+||||||+||+.+...|.+.|.+..++.||++|||.+.-... +|+...+-.|+++|+|+-++
T Consensus 159 cIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 159 CIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 9999999999999999999999999999999999999899999999999997655 69999999999999998654
No 108
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-43 Score=415.41 Aligned_cols=262 Identities=22% Similarity=0.300 Sum_probs=217.4
Q ss_pred CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhhhhcCCCCcccCCCccCCCCCceEE
Q 000522 528 HQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVI 607 (1445)
Q Consensus 528 ~~Lt~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 607 (1445)
+.++++++|+++++++.+..|+..+|..... .+|+++|+..++.+...... . .+.+..++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~-----------~~~~~~i~ 82 (329)
T PRK14257 23 NELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKE--D-----------FNHANVFE 82 (329)
T ss_pred chhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccC--C-----------CCcCceEE
Confidence 4789999999999999999999887765433 56999998766532200000 0 12345799
Q ss_pred EEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC----------
Q 000522 608 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG---------- 672 (1445)
Q Consensus 608 ~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~---------- 672 (1445)
++|+++.|... . +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 83 ~~nls~~y~~~-~---~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~ 158 (329)
T PRK14257 83 IRNFNFWYMNR-T---KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISS 158 (329)
T ss_pred EEeeEEEecCC-C---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 99999999642 1 235999999999999999999999999999999999996 5799988643
Q ss_pred -----eEEEEcCCCCCCCccHHHHHhcCCCCC----hh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000522 673 -----SIAYVPQVPWILSGTIRDNILFGKNYD----PQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1445)
Q Consensus 673 -----~i~y~~Q~p~l~~~ti~~nI~~g~~~~----~~----~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQk 739 (1445)
.++||||+||++++||+|||.|+..++ ++ .|+++++.|+|..+++ +.++++|.+||||||
T Consensus 159 ~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~-------~~~~~~~~~LSgGqk 231 (329)
T PRK14257 159 LELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVK-------DDLDKAGNALSGGQQ 231 (329)
T ss_pred HhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhh-------hhhhCCcccCCHHHH
Confidence 599999999999999999999875322 22 2677888998866553 678999999999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHh
Q 000522 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 818 (1445)
Q Consensus 740 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~ 818 (1445)
|||+||||++++|+|+||||||||||+++.+++.+. +.. +.+++|+|+|||+++++.. ||+|++|++|+|++.|+++
T Consensus 232 qRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~-i~~-l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~ 309 (329)
T PRK14257 232 QRLCIARAIALEPEVLLMDEPTSALDPIATAKIEEL-ILE-LKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETK 309 (329)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999986554 554 5567899999999999887 9999999999999999999
Q ss_pred HHHh
Q 000522 819 DLAV 822 (1445)
Q Consensus 819 ~~~~ 822 (1445)
++..
T Consensus 310 ~l~~ 313 (329)
T PRK14257 310 TIFI 313 (329)
T ss_pred HHhc
Confidence 9854
No 109
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=7.4e-43 Score=402.97 Aligned_cols=193 Identities=24% Similarity=0.327 Sum_probs=157.1
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.|.|+||+|.|.++. ..++++||.|.++++|++|||+|+|||||++++.+.+.|..|.|.-.-. .+++
T Consensus 389 vi~~~nv~F~y~~~~-~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H-----------~~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP-MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH-----------NKLP 456 (614)
T ss_pred eEEEeccccCCCCcc-hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc-----------ccch
Confidence 599999999997654 8999999999999999999999999999999999999999998864322 1233
Q ss_pred EEcC---CCcccCccHHHhcCC-CC-CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1302 VVPQ---SPFLFEGSLRDNLDP-FH-MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1302 ~VpQ---dp~lF~gTIReNLdp-~~-~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
+--| +-.-++-|.-+|+.| +. ....+++...|.++||.... .+.++ .+||+|||.|+++||.+++.|
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~----q~~p~----~~LS~Gqr~rVlFa~l~~kqP 528 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDA----QVVPM----SQLSDGQRRRVLFARLAVKQP 528 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccc----cccch----hhcccccchhHHHHHHHhcCC
Confidence 3333 334566677777654 22 34567788888888876321 22333 379999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeee
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHC 1436 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~ 1436 (1445)
.||+|||||++||.+|-....++|.+. .-+||+|+|+...|.. +++|.+.++|.+...
T Consensus 529 ~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~ 587 (614)
T KOG0927|consen 529 HLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKW 587 (614)
T ss_pred cEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeec
Confidence 999999999999999999999999764 4489999999999987 599999999988764
No 110
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1e-42 Score=389.36 Aligned_cols=219 Identities=51% Similarity=0.890 Sum_probs=206.3
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
|.++++|++++|+....++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 56899999999975445799999999999999999999999999999999999999999999999999988988999999
Q ss_pred EEEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1301 AVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1301 ~~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
+|+||+|.+|++|++||++++....++++.++++..++.+.+..+ |+++..++.+.+||+|||||++||||++++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 999999999999999999987666778889999999999998876 999999988999999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCA 1439 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p 1439 (1445)
+||||||++||+.+.+.+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999987778999999999999999999999999999998864
No 111
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.1e-42 Score=397.41 Aligned_cols=223 Identities=42% Similarity=0.736 Sum_probs=208.3
Q ss_pred CCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhc
Q 000522 1219 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRG 1298 (1445)
Q Consensus 1219 ~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~ 1298 (1445)
..|.|+++|++++|+.....+|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 46789999999999754457999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1299 RFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1299 ~i~~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
+++|+||+|.+|++|+++|+++.....+++++++++.+++.+.++.+ |+++.+++.+.+||+|||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876544566788899999999988888 9999999999999999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
++|||||||++||+++.+.+.+.+++..+++|+|++||+++.+..||||++|++|++++.|++++
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~ 240 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPEN 240 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999988767999999999999999999999999999999998764
No 112
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.6e-42 Score=379.20 Aligned_cols=207 Identities=45% Similarity=0.847 Sum_probs=188.1
Q ss_pred CCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhh
Q 000522 1217 WPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL 1296 (1445)
Q Consensus 1217 wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l 1296 (1445)
||..+.++++|++++|+....++++|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.+.+...+
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 89999999999999997543479999999999999999999999999999999999999999999999999998888889
Q ss_pred hcceEEEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1297 RGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1297 R~~i~~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
|++++|+||+|.+|++|+++|+.++...+++++.++++ +++....||+||+||++||||++++|
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~----------------~~~~~~~LS~G~~qrv~laral~~~p 144 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR----------------VSEGGLNLSQGQRQLLCLARALLKRP 144 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh----------------ccCCCCcCCHHHHHHHHHHHHHhhCC
Confidence 99999999999999999999998765444444443332 24456789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCA 1439 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p 1439 (1445)
+|+||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+|
T Consensus 145 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 145 RVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999987778999999999999988999999999999999876
No 113
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4.1e-42 Score=388.62 Aligned_cols=219 Identities=35% Similarity=0.553 Sum_probs=201.7
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+...+...+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57899999997544579999999999999999999999999999999999999999999999999988888889999999
Q ss_pred EcCCCcccCccHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000522 1303 VPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1445)
Q Consensus 1303 VpQdp~lF~gTIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1445)
+||++.+|+.|+++||..... .+.+++.++++..++.+.++.+ |+++..+..+.+||||||||++||||++++|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 999999999999999986543 3455677778888899888888 8898888888999999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1380 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1380 lLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||||||++||+.+.+.+.+.|++..+++|||++||+++.+..||+|++|++|++++.|++++
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~ 222 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDE 222 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 99999999999999999999998877899999999999998899999999999999998764
No 114
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-42 Score=367.03 Aligned_cols=213 Identities=30% Similarity=0.424 Sum_probs=185.2
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+|+|||++|. ...+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++..+||++|||
T Consensus 2 I~~~nvsk~y~--~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYG--NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcC--CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 79999999997 3579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCcccCc-cHHHhcCCC---CCCChHHHHHHHHHccHHHHHHhCCCch--hhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1303 VPQSPFLFEG-SLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLET--FVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1303 VpQdp~lF~g-TIReNLdp~---~~~sd~ei~~aL~~~~l~~~i~~lgLdt--~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
|=|.--||+- ||.|||..- ...+.+++.+- ..+.+...|||. ....-...|||||+||+.+||||..+|
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r-----~~ELl~lvgL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP 154 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKR-----ADELLDLVGLDPSEYADRYPHELSGGQQQRVGVARALAADP 154 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHH-----HHHHHHHhCCCHHHHhhcCchhcCcchhhHHHHHHHHhcCC
Confidence 9999999986 999998532 23344444322 233333337765 344556789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHH-hhcCEEEEEeCCeEeeecCCCCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTV-LNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti-~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|+++|||.++||+-|...+|+-+.+.. -++|+|+|||+++.. +-+|||.||++|+|+.+|+|++.
T Consensus 155 ~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~i 223 (309)
T COG1125 155 PILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEI 223 (309)
T ss_pred CeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHH
Confidence 9999999999999999999999887654 389999999999865 55899999999999999999764
No 115
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.8e-42 Score=357.42 Aligned_cols=200 Identities=28% Similarity=0.365 Sum_probs=172.3
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.|+++|++-+|.. ..+|+|||++|++||.++|+|||||||||||++|.|+.+|++|+|.++|
T Consensus 2 mi~i~~l~K~fg~------~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~ 75 (240)
T COG1126 2 MIEIKNLSKSFGD------KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKL 75 (240)
T ss_pred eEEEEeeeEEeCC------eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHH
Confidence 3678888877752 3359999999999999999999999999999999999999999999998
Q ss_pred --eEEEEcCCCCCCCc-cHHHHHhcCC----CCC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 --SIAYVPQVPWILSG-TIRDNILFGK----NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 --~i~y~~Q~p~l~~~-ti~~nI~~g~----~~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
++|+|+|+..||+- ||.|||..+. ..+ +++-.+.++..+|.+..+..| ..||||||||
T Consensus 76 R~~vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQR 144 (240)
T COG1126 76 RRKVGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQR 144 (240)
T ss_pred HHhcCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHH
Confidence 37899999999975 9999999863 222 234556677778877666666 4899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHH
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~ 820 (1445)
|||||||..+|+++|+|||||||||+....+++- +......|.|.|+|||.+.+.+. ||||+.|++|+|+++|+++++
T Consensus 145 VAIARALaM~P~vmLFDEPTSALDPElv~EVL~v-m~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~ 223 (240)
T COG1126 145 VAIARALAMDPKVMLFDEPTSALDPELVGEVLDV-MKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEF 223 (240)
T ss_pred HHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHH-HHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHH
Confidence 9999999999999999999999999999988875 33324568899999999999987 999999999999999999987
Q ss_pred Hh
Q 000522 821 AV 822 (1445)
Q Consensus 821 ~~ 822 (1445)
..
T Consensus 224 f~ 225 (240)
T COG1126 224 FD 225 (240)
T ss_pred hc
Confidence 54
No 116
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-40 Score=420.12 Aligned_cols=201 Identities=23% Similarity=0.327 Sum_probs=166.9
Q ss_pred CCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccC-
Q 000522 1235 SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--ICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFE- 1311 (1445)
Q Consensus 1235 ~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~--~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~- 1311 (1445)
+....|+|||=-++||-..|++|.||||||||++.|.+=.. ..+|+|+|||.+..+ +..++++|||.|++.-.+
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 34568999999999999999999999999999999997653 357999999998765 789999999999886444
Q ss_pred ccHHHhcCCC------CCCChHH----HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC-CEEE
Q 000522 1312 GSLRDNLDPF------HMNDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS-KVLC 1380 (1445)
Q Consensus 1312 gTIReNLdp~------~~~sd~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~-~ILl 1380 (1445)
-||||-|.+. .+.+++| +.++++-.+|.+.- |..||.-|..||..||.||.||=-|..|| .||.
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~~-----daiVG~~G~GLs~eQRKrLTIgVELvA~P~~ilF 953 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEYA-----DALVGLPGSGLSTEQRKRLTIGVELVANPSSILF 953 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhhh-----hhhccCCCCCCCHHHhceeeEEEEEecCCceeEE
Confidence 4999998542 2233333 44555555555443 45677777889999999999999999999 8999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhH--HhhcCEEEEEeC-CeEeeecCCCCCC
Q 000522 1381 LDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST--VLNMDEILILDH-GHLPHCGCAAAPN 1443 (1445)
Q Consensus 1381 LDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~t--i~~~DrI~Vl~~-G~vvE~G~p~~~~ 1443 (1445)
||||||+||+++...|.+.+|+.. .|+||++.-|+++. .+.+|+++.|++ |+.|-+|++.+-+
T Consensus 954 LDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s 1020 (1391)
T KOG0065|consen 954 LDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENS 1020 (1391)
T ss_pred ecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccccc
Confidence 999999999999999999999874 69999999999884 457899999976 7999999987653
No 117
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=396.49 Aligned_cols=218 Identities=24% Similarity=0.352 Sum_probs=186.4
Q ss_pred CCccEEEEEEEEEeCCC---CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCC----
Q 000522 1219 FQGLIEFQNVTMRYKPS---LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT---- 1291 (1445)
Q Consensus 1219 ~~g~I~f~nVs~~Y~~~---~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i---- 1291 (1445)
....|+++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.
T Consensus 18 ~~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~ 97 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNH 97 (320)
T ss_pred CCceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccc
Confidence 34469999999999743 23699999999999999999999999999999999999999999999999998653
Q ss_pred ------------ChHhhhcceEEEcCCC--cccCccHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCc-hhhhc
Q 000522 1292 ------------PVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKE 1353 (1445)
Q Consensus 1292 ------------~~~~lR~~i~~VpQdp--~lF~gTIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e 1353 (1445)
+...+|++++||+|+| .+|++|+++|+.+... .++++. .++ ..+.++.+|++ ...+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~---~~~--~~~~l~~~gL~~~~~~~ 172 (320)
T PRK13631 98 ELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEA---KKL--AKFYLNKMGLDDSYLER 172 (320)
T ss_pred cccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHH---HHH--HHHHHHHcCCChhHhcC
Confidence 3567899999999998 6899999999965421 233332 222 23455556886 56778
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHh-hcCEEEEEeCC
Q 000522 1354 SGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHG 1431 (1445)
Q Consensus 1354 ~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G 1431 (1445)
.+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .||||++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 888999999999999999999999999999999999999999999998653 5899999999999875 59999999999
Q ss_pred eEeeecCCCC
Q 000522 1432 HLPHCGCAAA 1441 (1445)
Q Consensus 1432 ~vvE~G~p~~ 1441 (1445)
++++.|+|++
T Consensus 253 ~i~~~g~~~~ 262 (320)
T PRK13631 253 KILKTGTPYE 262 (320)
T ss_pred EEEEeCCHHH
Confidence 9999999874
No 118
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.1e-41 Score=372.95 Aligned_cols=210 Identities=27% Similarity=0.404 Sum_probs=184.2
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++|++++|+ ..++|+|+||+|++||.++|+||||||||||+++|.|+++|.+|+|.+||.|+.+++..++-++++
T Consensus 2 ~L~~~~ls~~y~--~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYG--GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEEC--CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 478999999997 357999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCcc-cCccHHHhcCCCC--------CCC--hH-HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000522 1302 VVPQSPFL-FEGSLRDNLDPFH--------MND--DL-KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1369 (1445)
Q Consensus 1302 ~VpQdp~l-F~gTIReNLdp~~--------~~s--d~-ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1369 (1445)
||||++.. |.-||+|-+..+. ..+ |+ .+.+||+.+++.++.+. .-..||||||||+.||
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r---------~~~~LSGGerQrv~iA 150 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADR---------PVDELSGGERQRVLIA 150 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcC---------cccccChhHHHHHHHH
Confidence 99999754 4559988875432 112 33 47778888888776432 2235999999999999
Q ss_pred HHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHH-hhcCEEEEEeCCeEeeecCCCCC
Q 000522 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTV-LNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti-~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||.++|+||+||||||+||....-.+.+.+++.. +++|+|+|.|+++.. +.||++++|++|+++..|+|++-
T Consensus 151 rALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~ev 226 (258)
T COG1120 151 RALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEV 226 (258)
T ss_pred HHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchh
Confidence 99999999999999999999999999999998875 479999999999865 56899999999999999999863
No 119
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-41 Score=379.00 Aligned_cols=219 Identities=34% Similarity=0.559 Sum_probs=201.2
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+++|++++|+....++++|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999997543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EcCCCcccCccHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000522 1303 VPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1445)
Q Consensus 1303 VpQdp~lF~gTIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1445)
+||+|.+|+.|++||+..+.. .+.+++.+.++.+++.+.++.+ |+++..+....+||+|||||++||||++++|+++
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999986533 3455677778888899988887 8888888888899999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1380 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1380 lLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||||||++||+.+.+.+.+.|++..++.|+|++||+++.+..||+|++|++|++++.|++++
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~ 222 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEE 222 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHH
Confidence 99999999999999999999998878899999999999999999999999999999998754
No 120
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.5e-41 Score=395.43 Aligned_cols=210 Identities=24% Similarity=0.381 Sum_probs=180.8
Q ss_pred EEEEEEEEEeCCC--CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHh---hh
Q 000522 1223 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1297 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR 1297 (1445)
|+++||+++|+.+ ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cceEEEcCCCcccC-ccHHHhcCCCC---CCChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000522 1298 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1369 (1445)
Q Consensus 1298 ~~i~~VpQdp~lF~-gTIReNLdp~~---~~sd~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1369 (1445)
++|++|||++.+|+ .|+++|+.+.. ..+.+ ++.++++.+ |++.........||||||||++||
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~v---------gL~~~~~~~~~~LSgGqkQRV~IA 152 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALV---------GLGDKHDSYPSNLSGGQKQRVAIA 152 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc---------CCchhhhCChhhCCHHHHHHHHHH
Confidence 89999999999996 69999996421 12222 233444444 554445556678999999999999
Q ss_pred HHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|||+.+|+|||||||||+||+++.+.+.+.|++..+ +.|||+|||+++.+.. ||+|++|++|+|+|.|++++
T Consensus 153 RAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~ 227 (343)
T TIGR02314 153 RALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSE 227 (343)
T ss_pred HHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 999999999999999999999999999999988643 7999999999999976 89999999999999998754
No 121
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.1e-41 Score=376.13 Aligned_cols=220 Identities=39% Similarity=0.629 Sum_probs=202.5
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
|.|+++|++++|+. ..++++|+||+|++||+++|+|++|||||||+++|.|+++|.+|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDE-KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCC-CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 46899999999963 23699999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcCCCcccCccHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1301 AVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1301 ~~VpQdp~lF~gTIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
+|+||++.+|++|+++|+..+.. ..++++.++++.+++.+.++.+ |+++.++....+||+|||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999976543 3456778888999999988887 89999988888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1378 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+..||+|++|++|++++.|++++
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~ 223 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDE 223 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHH
Confidence 9999999999999999999999988767899999999999999999999999999999887644
No 122
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.5e-40 Score=371.50 Aligned_cols=217 Identities=37% Similarity=0.524 Sum_probs=197.6
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
|.++++|++++|+....++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999965335699999999999999999999999999999999999999999999999999888887888999
Q ss_pred EEEcCCCcccCccHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1301 AVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1301 ~~VpQdp~lF~gTIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
+|+||+|.+|..|++||+..... .+++++.++++..++.+.++.. |+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999998999999976432 3455777889999998888776 89998888888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeec
Q 000522 1378 VLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G 1437 (1445)
+|||||||++||.++.+.+.+.|++..+++|||++||+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999876668999999999988889999999999998765
No 123
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-40 Score=364.92 Aligned_cols=206 Identities=28% Similarity=0.413 Sum_probs=180.8
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.|+++|++++|... +||+||||+|++||.+||+||+|||||||+++++|+++|.+|+|.++|.++..... |.+||
T Consensus 4 ~i~v~nl~v~y~~~--~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR--PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE--eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 59999999999755 49999999999999999999999999999999999999999999999998766543 67999
Q ss_pred EEcCCC---cccCccHHHhcCCCC-----------CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000522 1302 VVPQSP---FLFEGSLRDNLDPFH-----------MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1367 (1445)
Q Consensus 1302 ~VpQdp---~lF~gTIReNLdp~~-----------~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1367 (1445)
||||.. .-|+-||+|-+..+. ..+.+++.+||+++|++++. |-.++ .|||||+||+.
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-----~r~i~----~LSGGQ~QRV~ 149 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-----DRQIG----ELSGGQKQRVL 149 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-----CCccc----ccCcHHHHHHH
Confidence 999955 458889999986542 11347899999999998764 33454 59999999999
Q ss_pred HHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC-CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~-~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||||+.+|++|+|||||+++|+.+++.|.+.|++..+ ||||++|+|+++.+.+ +|+|+.|. +++...|+|++-
T Consensus 150 lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 150 LARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999999988764 9999999999999886 79999995 667889998875
No 124
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.1e-40 Score=374.40 Aligned_cols=209 Identities=32% Similarity=0.460 Sum_probs=179.8
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCC-----CCCCcEEEECCeeCCCCC--hHh
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT-----PICGGQILVDGLNIINTP--VRD 1295 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~-----~~~~G~I~IDG~di~~i~--~~~ 1295 (1445)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++.+.+ ...
T Consensus 1 i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGD--KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 578999999964 36999999999999999999999999999999999999 999999999999998776 567
Q ss_pred hhcceEEEcCCCcccCccHHHhcCCCCC----CC----hHHHHHHHHHccHHHHHHhCCCchhhhcC--CCCCChhHHHH
Q 000522 1296 LRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKES--GISFSVGQRQL 1365 (1445)
Q Consensus 1296 lR~~i~~VpQdp~lF~gTIReNLdp~~~----~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~--G~~LSgGQrQr 1365 (1445)
+|++++|+||++.+|..|++||+.+... .. ++++.++++.. |++...... +.+||||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~~~LSgG~~qr 149 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKA---------ALWDEVKDRLHALGLSGGQQQR 149 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHc---------CCChHHhccCCcccCCHHHHHH
Confidence 8899999999999998899999975321 11 12333344443 554444433 46899999999
Q ss_pred HHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++||||++++|++|||||||++||+++.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+|++.
T Consensus 150 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 150 LCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 99999999999999999999999999999999999987656899999999998875 899999999999999998763
No 125
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-40 Score=374.13 Aligned_cols=218 Identities=37% Similarity=0.629 Sum_probs=201.0
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++|++++|+.+ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 4789999999643 469999999999999999999999999999999999999999999999999999888889999999
Q ss_pred EcCCCcccCccHHHhcCCCC-CCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000522 1303 VPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1445)
Q Consensus 1303 VpQdp~lF~gTIReNLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1445)
+||+|.+|++|+++|+.... ..+++++.++++.+++.+.+..+ |+++.+.....+||+|||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999997643 34566778888899999888887 8999999888999999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1380 CLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1380 lLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||||||++||+++.+.+.+.|++..++.|+|+++|+++.+..||++++|++|++++.|++++
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~ 221 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEE 221 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHH
Confidence 99999999999999999999988766899999999999999999999999999999888654
No 126
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.4e-41 Score=355.96 Aligned_cols=212 Identities=28% Similarity=0.447 Sum_probs=176.5
Q ss_pred cEEEEEEEEEeCCCC--CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCC-ChHhhhc
Q 000522 1222 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT-PVRDLRG 1298 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i-~~~~lR~ 1298 (1445)
.++++|+++.|+... .++|+||||+|.+||.+||||+||||||||.++|.|+.+|++|+|.+||.+.... +.+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 489999999997542 2599999999999999999999999999999999999999999999999776543 3446788
Q ss_pred ceEEEcCCCc--ccC-ccHHHhc----CCCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000522 1299 RFAVVPQSPF--LFE-GSLRDNL----DPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1370 (1445)
Q Consensus 1299 ~i~~VpQdp~--lF~-gTIReNL----dp~~~-~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1370 (1445)
.+.+|+|||. |=+ -||++-| .+.+. ...++++++|+.+||.+.. .......||||||||+||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~--------l~R~P~eLSGGQ~QRiaIAR 154 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSF--------LDRRPHELSGGQRQRIAIAR 154 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHH--------HhcCchhcChhHHHHHHHHH
Confidence 8999999996 222 2666555 33221 2344577788777765433 34456679999999999999
Q ss_pred HhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1371 ALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1371 ALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||.-+|++||+|||||+||....+.|.+.+.+..+ +-|.|+|||+++.+.. ||||+||++|+++|.++-++
T Consensus 155 AL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~ 228 (252)
T COG1124 155 ALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEE 228 (252)
T ss_pred HhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhh
Confidence 99999999999999999999999999999987765 5599999999999986 89999999999999987655
No 127
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.4e-40 Score=374.49 Aligned_cols=219 Identities=36% Similarity=0.585 Sum_probs=199.0
Q ss_pred EEEEEEEEEeCCC-CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1223 IEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
++++|++++|+.. ..++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4789999999653 246999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcCCCcccCccHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1302 VVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1302 ~VpQdp~lF~gTIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
|+||+|.+|+.|++||+..... ...+++.+.++..++.+.+..+ |+++..+....+||+|||||++||||++++|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999976432 3455677788888888888877 888888888889999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|||||||++||+.+.+.+.+.|++..+++|||++||+++.+..||+|++|++|++++.|++++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~ 223 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDE 223 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999988767899999999999999999999999999999887643
No 128
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.7e-40 Score=357.28 Aligned_cols=208 Identities=29% Similarity=0.424 Sum_probs=172.7
Q ss_pred EEEEEEEEEeCCCC--CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChH---hh-
Q 000522 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DL- 1296 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~l- 1296 (1445)
++++||+..|..+. ..+|+|+||+|++||.|+|+||||||||||+++|-++..|++|.|.++|.|+..++-+ .+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67999999997543 3699999999999999999999999999999999999999999999999999999843 34
Q ss_pred hcceEEEcCCCcccCc-cHHHhcCC---CCCCChHHHHHHHHHccHHHHHHhCCCchhhh-cCCCCCChhHHHHHHHHHH
Q 000522 1297 RGRFAVVPQSPFLFEG-SLRDNLDP---FHMNDDLKIWSVLEKCHVKEEVEAVGLETFVK-ESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1297 R~~i~~VpQdp~lF~g-TIReNLdp---~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~-e~G~~LSgGQrQrl~LARA 1371 (1445)
|++||+|+|+..|++. |++||+.. +......+..++ ..+..+.+||..... .....||||||||+|||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~-----~~~l~~~lgl~~~~~~~~p~eLSGGqqQRVAIARA 156 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRA-----AEELLEVLGLEDRLLKKKPSELSGGQQQRVAIARA 156 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHH-----HHHHHHhcCChhhhccCCchhcCHHHHHHHHHHHH
Confidence 4579999999999876 99999862 222221111111 112222335654444 5567899999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhhcCEEEEEeCCeEee
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLPH 1435 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE 1435 (1445)
|+.+|+|++.||||++||.+|.+.|.+.+++.. .++|+|+|||+......|||++.|.||++.+
T Consensus 157 L~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 157 LINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999998874 4889999999999999999999999999543
No 129
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.9e-40 Score=379.64 Aligned_cols=193 Identities=22% Similarity=0.304 Sum_probs=161.2
Q ss_pred CccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcc
Q 000522 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1299 (1445)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1299 (1445)
...+++.+|+|.|.|+.++.+++++++++.-+++++||++|+||||+++++.+-.+|..|.+-+.+ |.+
T Consensus 360 ~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 347999999999999887899999999999999999999999999999999999999999988865 789
Q ss_pred eEEEcCCCccc-CccHHHhcCC----CCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCC-CCCChhHHHHHHHHHHhc
Q 000522 1300 FAVVPQSPFLF-EGSLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESG-ISFSVGQRQLICLARALL 1373 (1445)
Q Consensus 1300 i~~VpQdp~lF-~gTIReNLdp----~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G-~~LSgGQrQrl~LARALL 1373 (1445)
|++-.|.-+=| +-.+-. +|. +...+++|+.+.|... |++.++...+ ..||||||-|+++|-...
T Consensus 429 i~~f~Qhhvd~l~~~v~~-vd~~~~~~pG~~~ee~r~hl~~~---------Gl~g~la~~si~~LSGGQKsrvafA~~~~ 498 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNA-VDFMEKSFPGKTEEEIRRHLGSF---------GLSGELALQSIASLSGGQKSRVAFAACTW 498 (582)
T ss_pred ecchhHhhhhHHHHHhHH-HHHHHHhCCCCCHHHHHHHHHhc---------CCCchhhhccccccCCcchhHHHHHHHhc
Confidence 99999977633 211111 111 1122788888777665 5555554444 469999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEee
Q 000522 1374 KSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPH 1435 (1445)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE 1435 (1445)
.+|.+|||||||..||.++-..+-++|+. |.| -||+|+|+.+.+.. |+.++|.++|+|..
T Consensus 499 ~~PhlLVLDEPTNhLD~dsl~AL~~Al~~-F~G-GVv~VSHd~~fi~~~c~E~Wvve~g~vt~ 559 (582)
T KOG0062|consen 499 NNPHLLVLDEPTNHLDRDSLGALAKALKN-FNG-GVVLVSHDEEFISSLCKELWVVEDGKVTP 559 (582)
T ss_pred CCCcEEEecCCCccccHHHHHHHHHHHHh-cCC-cEEEEECcHHHHhhcCceeEEEcCCcEEe
Confidence 99999999999999999999999999976 444 69999999999986 89999999999975
No 130
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.4e-40 Score=377.28 Aligned_cols=219 Identities=25% Similarity=0.340 Sum_probs=195.7
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.|+++|+++.|+... .++|+|+||+|++||+++|+|+||||||||+++|.|+++ .+|+|.++|
T Consensus 2 ~i~~~nls~~~~~~~----~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr 76 (275)
T cd03289 2 QMTVKDLTAKYTEGG----NAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWR 76 (275)
T ss_pred eEEEEEEEEEeCCCC----CcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHh
Confidence 478999999996321 235999999999999999999999999999999999998 799999987
Q ss_pred -eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccC
Q 000522 673 -SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 751 (1445)
Q Consensus 673 -~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~ 751 (1445)
.|+||||+|++|++|++||+....++++++..++++.++|...+..+|++++|.++++|.+||||||||++||||++++
T Consensus 77 ~~i~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~ 156 (275)
T cd03289 77 KAFGVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSK 156 (275)
T ss_pred hhEEEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcC
Confidence 4899999999999999999964345667788999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHhccccCccc
Q 000522 752 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVSLYSGFWS 830 (1445)
Q Consensus 752 ~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~~~ 830 (1445)
|+|+||||||++||+.+.+.+.+. +.. ..+++|+|+|||+++.+..||+|++|++|++++.|+++++.+....+.++
T Consensus 157 p~illlDEpts~LD~~~~~~l~~~-l~~-~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~ 233 (275)
T cd03289 157 AKILLLDEPSAHLDPITYQVIRKT-LKQ-AFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQA 233 (275)
T ss_pred CCEEEEECccccCCHHHHHHHHHH-HHH-hcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHH
Confidence 999999999999999998877766 443 34578999999999999899999999999999999999998765444433
No 131
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-40 Score=372.31 Aligned_cols=213 Identities=28% Similarity=0.407 Sum_probs=179.5
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCCh---Hhhhcc
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1299 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1299 (1445)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 478999999963 469999999999999999999999999999999999999999999999999987764 567889
Q ss_pred eEEEcCCCcccCc-cHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000522 1300 FAVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1445)
Q Consensus 1300 i~~VpQdp~lF~g-TIReNLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1445)
++|+||++.+|++ |+++|+.... ..+.++..+. ..+.++.+|++.........||||||||++||||+++
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~ia~al~~ 153 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREI-----VLEKLEAVGLRGAEDLYPAELSGGMKKRVALARALAL 153 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHH-----HHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 9999999999986 9999996531 1222222111 1223333455544555556899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1375 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+|++.
T Consensus 154 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 224 (235)
T cd03261 154 DPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEEL 224 (235)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHH
Confidence 999999999999999999999999998864 37899999999998876 899999999999999987653
No 132
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-40 Score=365.48 Aligned_cols=211 Identities=30% Similarity=0.455 Sum_probs=188.4
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCC-CCChHhhhcce
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII-NTPVRDLRGRF 1300 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~-~i~~~~lR~~i 1300 (1445)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.++. ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 58999999999877 78999999999999999999999999999999999999999999999999998 48899999999
Q ss_pred EEEcCCC--cccCccHHHhcCCCCC---CChHH----HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000522 1301 AVVPQSP--FLFEGSLRDNLDPFHM---NDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1301 ~~VpQdp--~lF~gTIReNLdp~~~---~sd~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1445)
++|.|+| .+|..||.+.+.++.. .+.+| +.++|+.+++.+ .......+||||||||+|||.+
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~---------~~~r~p~~LSGGqkqRvaIA~v 152 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEE---------LLDRPPFNLSGGQKQRVAIAGV 152 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchh---------hccCCccccCCcceeeHHhhHH
Confidence 9999999 7999999999987643 23333 445555555543 3455667899999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|..+|+|||||||||+||+...+.+.+.+++..+ ++|+|+|||+++.+.. |||++||++|+++.+|+|++.
T Consensus 153 La~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i 226 (235)
T COG1122 153 LAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEI 226 (235)
T ss_pred HHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHH
Confidence 9999999999999999999999999999998754 5799999999999998 899999999999999998653
No 133
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=4.8e-37 Score=370.41 Aligned_cols=493 Identities=19% Similarity=0.196 Sum_probs=338.6
Q ss_pred HHHhhhhhHhhhhhcccCCC---CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccc
Q 000522 913 ASRNGNDLWLSYWVDTTGSS---QTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLF 989 (1445)
Q Consensus 913 ~~~~~~~~wl~~w~~~~~~~---~~~~~~~~~l~~~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~f 989 (1445)
......++|++.|.....+. .........+.+|.+++.+...+...+.++......+.-.-+-+.++++-+... .|
T Consensus 57 l~~v~~~v~~~~w~~~~~~aL~~~d~~~f~~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~-~~ 135 (604)
T COG4178 57 LLSVRGQVLLNDWNGPFYNALARRDLAAFWQQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPR-RY 135 (604)
T ss_pred HHHhheeeeeHhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-ch
Confidence 33445567777776432110 001112233567777777777777778888888888888888888888888777 44
Q ss_pred cccCChh------HHHHHHHhhHHHHhhhhHHHHHHHHHHHHhHHHhhhhHHH--------------HHHH----HHHHH
Q 000522 990 FDQTPGG------RILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSY--------------VQVF----FLLLL 1045 (1445)
Q Consensus 990 f~~~~~G------~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~l~~~~~~~~--------------~~~~----~~~~~ 1045 (1445)
|.-...| ..=+|+.+|+...-+..-.....++.++++++...+++.- ..|. ++++.
T Consensus 136 y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Y 215 (604)
T COG4178 136 YRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIY 215 (604)
T ss_pred HHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHH
Confidence 3333332 3346899998877665444444555555444433333221 1111 11111
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 000522 1046 VPFW-FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLW 1124 (1445)
Q Consensus 1046 ~pl~-~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1124 (1445)
+++. .+..++.+...+..-+..+.|..-| ....-.-+....|-.|+-|+...++..+..+.-.+.+......+.+
T Consensus 216 a~~~s~~~~~iGr~Li~LN~~~~~~EA~fR----~~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~ 291 (604)
T COG4178 216 AISASLLTHLIGRPLIRLNFERQKLEADFR----YSLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIR 291 (604)
T ss_pred HHHHHHHHHHHccccccccHHHHHHHHHHH----HHHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2211 1222444444444444444444443 3344455677788899999888877777666666655555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--
Q 000522 1125 LSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV-- 1202 (1445)
Q Consensus 1125 l~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~-- 1202 (1445)
++..-...+-+.+.+-.+++. ...-.+..+.|.++.+.....++...++|++..+.++.+-...+.|+.++.+.
T Consensus 292 l~~~~~gy~~~s~v~P~li~a----p~~f~g~i~~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~ 367 (604)
T COG4178 292 LTWFQLGYGWLSVVLPILIAA----PRYFSGQITFGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALE 367 (604)
T ss_pred hHHhhhhhhHHHHHHHHHhcc----HhhhcCcChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 444333332222211111111 01113456678888888888899999999999999999999999999998732
Q ss_pred ----CccccccCC-CCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC
Q 000522 1203 ----PQEELCGYQ-SLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC 1277 (1445)
Q Consensus 1203 ----~~e~~~~~~-~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~ 1277 (1445)
+++...... .....-..+..|+|+|++..-+++. ..|+++||+|+|||.+-|.|+||||||||+++|.|+.+--
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g 446 (604)
T COG4178 368 AAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWG 446 (604)
T ss_pred hccCcccccCcccccccccccccceeEEeeeeEECCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccC
Confidence 222111100 0000000147899999999987654 7899999999999999999999999999999999999999
Q ss_pred CcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcC-CCC--CCChHHHHHHHHHccHHHHHHhC-CCchhhhc
Q 000522 1278 GGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLD-PFH--MNDDLKIWSVLEKCHVKEEVEAV-GLETFVKE 1353 (1445)
Q Consensus 1278 ~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLd-p~~--~~sd~ei~~aL~~~~l~~~i~~l-gLdt~v~e 1353 (1445)
+|+|..-. -+++-++||.|++-.||+||-|. |.. .++|+|+.++|.+|||.+.++++ +.+.
T Consensus 447 ~G~I~~P~-----------~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~~---- 511 (604)
T COG4178 447 SGRISMPA-----------DSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEEDR---- 511 (604)
T ss_pred CCceecCC-----------CCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccCc----
Confidence 99987631 23589999999999999999985 333 37899999999999999999987 4444
Q ss_pred CCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeC
Q 000522 1354 SGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDH 1430 (1445)
Q Consensus 1354 ~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~ 1430 (1445)
-..-||+||||||++||.+|++|++++||||||+||.++|..+.+.++++..++|||.|+||.....-.++.+-+++
T Consensus 512 W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 512 WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 23359999999999999999999999999999999999999999999999999999999999887777777666543
No 134
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.6e-40 Score=376.74 Aligned_cols=212 Identities=28% Similarity=0.440 Sum_probs=183.4
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.|+++||+.+|++.. +|+|+||+|+.||.++++|||||||||++++|.|+.+|++|+|.|||.|+.++++++ +.|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 589999999997543 999999999999999999999999999999999999999999999999999999976 7899
Q ss_pred EEcCCCcccCc-cHHHhcCCCCCC---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1302 VVPQSPFLFEG-SLRDNLDPFHMN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1302 ~VpQdp~lF~g-TIReNLdp~~~~---sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
+|+|+..||+- ||++||.+.-+. ..+|+.+..+ +..+.++++..+......||||||||+||||||.++|+
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~-----eva~~L~l~~lL~r~P~~LSGGQrQRVAlaRAlVr~P~ 153 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVK-----EVAKLLGLEHLLNRKPLQLSGGQRQRVALARALVRKPK 153 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHH-----HHHHHcCChhHHhcCcccCChhhHHHHHHHHHHhcCCC
Confidence 99999999986 999999875332 2333322211 22233366666677788999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1378 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+++||||.|+||++....+..-|++..+ +.|+|.|||+....+. +|||+||++|+|.+.|+|.+.
T Consensus 154 v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~el 221 (338)
T COG3839 154 VFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLEL 221 (338)
T ss_pred EEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHH
Confidence 9999999999999999988888877543 6899999999887765 799999999999999999876
No 135
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-40 Score=362.92 Aligned_cols=205 Identities=28% Similarity=0.373 Sum_probs=172.8
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
|++++++..|... ......+|+|+||+|++||+.+|+|.||+|||||++++.++-.|++|+|.++|
T Consensus 2 I~l~~vsK~~~~~-~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~ 80 (339)
T COG1135 2 IELENVSKTFGQT-GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQ 80 (339)
T ss_pred eEEEeeeeeeccC-CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHH
Confidence 6788998888753 22234579999999999999999999999999999999999999999999988
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCCC----Chh---hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 ---SIAYVPQVPWILS-GTIRDNILFGKNY----DPQ---SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~~----~~~---~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
+||+++|++-|++ .||.|||.|..+. .++ +..+.++..+|.+.. +....+||||||||
T Consensus 81 ~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~-----------~~yP~qLSGGQKQR 149 (339)
T COG1135 81 LRQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKA-----------DRYPAQLSGGQKQR 149 (339)
T ss_pred HHhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhh-----------ccCchhcCcchhhH
Confidence 5999999999997 5999999997543 223 344444555555332 44567999999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHH
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~ 820 (1445)
|+|||||..+|+|||.|||||||||+|.+.|++.+..-....|-|+++|||.++.++. |||+.+|++|+++++|+..++
T Consensus 150 VaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~v 229 (339)
T COG1135 150 VAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEV 229 (339)
T ss_pred HHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHh
Confidence 9999999999999999999999999999999986432223347799999999999998 999999999999999999887
Q ss_pred Hh
Q 000522 821 AV 822 (1445)
Q Consensus 821 ~~ 822 (1445)
..
T Consensus 230 F~ 231 (339)
T COG1135 230 FA 231 (339)
T ss_pred hc
Confidence 54
No 136
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-40 Score=348.93 Aligned_cols=212 Identities=29% Similarity=0.430 Sum_probs=185.9
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCC---hHhhhc
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDLRG 1298 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---~~~lR~ 1298 (1445)
.|+++||+.+|+ +...+|+||||+|++||.|+|+|+||||||||+++|.|+.+|++|+|.++|.++...+ ++.+|+
T Consensus 3 ~i~~~nl~k~yp-~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYP-GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecC-CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 589999999997 4567999999999999999999999999999999999999999999999999998888 677789
Q ss_pred ceEEEcCCCcccCc-cHHHhcCC------------CCCCChH---HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhH
Q 000522 1299 RFAVVPQSPFLFEG-SLRDNLDP------------FHMNDDL---KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQ 1362 (1445)
Q Consensus 1299 ~i~~VpQdp~lF~g-TIReNLdp------------~~~~sd~---ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQ 1362 (1445)
++|+|.|++-|-+. |+-+|+.. ++-++.+ +..++|+++|+.+.. -.+..+|||||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A---------~qra~~LSGGQ 152 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKA---------YQRASTLSGGQ 152 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHH---------HHHhccCCcch
Confidence 99999999998875 89999742 2334433 355666677665543 33455799999
Q ss_pred HHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCC
Q 000522 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCA 1439 (1445)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p 1439 (1445)
+||++|||||..+|+|++=|||+|+||+++.+.|++.|++.. .|.|||+.-|.++..++ ||||+=|++|||+-.|++
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~ 232 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPA 232 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCCh
Confidence 999999999999999999999999999999999999998764 58999999999999876 699999999999999999
Q ss_pred CCCC
Q 000522 1440 AAPN 1443 (1445)
Q Consensus 1440 ~~~~ 1443 (1445)
++++
T Consensus 233 ~el~ 236 (258)
T COG3638 233 SELT 236 (258)
T ss_pred hhhh
Confidence 8874
No 137
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.9e-40 Score=368.28 Aligned_cols=214 Identities=25% Similarity=0.373 Sum_probs=179.3
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+++||+++|+....++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.... ..+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEEE
Confidence 5789999999653356999999999999999999999999999999999999999999999999987643 667889999
Q ss_pred EcCCCccc-CccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1303 VPQSPFLF-EGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1303 VpQdp~lF-~gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
+||+|.+| ..|+++|+.... ....++..+ ...+.++.+|++........+||+|||||++||||++++|++
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 154 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKE-----EVELLLRVLGLTDKANKRARTLSGGMKRKLSLAIALIGGPSV 154 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999988 579999986421 112111111 122333334554444555568999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+|++.
T Consensus 155 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 155 LLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999987778999999999999875 899999999999999998753
No 138
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=8.9e-40 Score=366.81 Aligned_cols=215 Identities=35% Similarity=0.525 Sum_probs=194.7
Q ss_pred CCccEEEEEEEEEeCCC-CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhh
Q 000522 1219 FQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLR 1297 (1445)
Q Consensus 1219 ~~g~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR 1297 (1445)
..|.++++|++++|+.. ..++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+....|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 35789999999999753 24699999999999999999999999999999999999999999999999999888888888
Q ss_pred cceEEEcCCCcccCccHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000522 1298 GRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLK 1374 (1445)
Q Consensus 1298 ~~i~~VpQdp~lF~gTIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1445)
++++|+||+|.+|++|+++|+++... ....++++..++.++.+.++.+ |+++.+++...+||||||||++||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999985432 3344556666677788888888 89988999899999999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeE
Q 000522 1375 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHL 1433 (1445)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~v 1433 (1445)
+|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999987778999999999999999999999999975
No 139
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-37 Score=342.79 Aligned_cols=469 Identities=19% Similarity=0.251 Sum_probs=325.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCChhHHHHHHHhhHHHHhhhhHHHHHHHHHHH
Q 000522 945 LCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANF 1024 (1445)
Q Consensus 945 ~~~l~~~~~i~~~~~~~~~~~~~~~~s~~lh~~ll~~ll~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~ 1024 (1445)
|+++..+..+...+........+.+.-.+++.++.++++.+|+.-+++...++++.++++|+..|.-.+ ..+..+.+..
T Consensus 54 f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~-s~lp~~~qa~ 132 (546)
T COG4615 54 FLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAF-SRLPELVQAI 132 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehH-hhhHHHHHHH
Confidence 333444444444555566778889999999999999999999999999999999999999999988332 2334455666
Q ss_pred HhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHhHHHHhhccHHHHHhcCcHH--HHHH
Q 000522 1025 VGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSED--YFMA 1102 (1445)
Q Consensus 1025 ~~~l~~~~~~~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~~l~~~~~spl~~~~~Etl~Gl~tIraf~~e~--~f~~ 1102 (1445)
+..+++.+.+++.+|.+.++.+..+++..+.+.+..+..-+--+...+....++.+++..++|.+..+...--. .+.+
T Consensus 133 il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~ 212 (546)
T COG4615 133 ILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNN 212 (546)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhh
Confidence 67778888888988876655544444333332222111111112222344568899999999999988765332 3333
Q ss_pred HHHHHHHHHHH----HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccHHHHHHHHHHHHHHHHHHHH
Q 000522 1103 KFKEHVVLYQR----TSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGN 1178 (1445)
Q Consensus 1103 ~~~~~~d~~~~----~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~ 1178 (1445)
.+...-+...+ ..........|.++.+-.+ +..+..++... ... +...........+.+-+++.+
T Consensus 213 ~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~l----IGlvf~lal~~---~w~----st~~a~tivlvlLflr~pL~s 281 (546)
T COG4615 213 LYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGL----IGLVFWLALSL---GWA----STNVAATIVLVLLFLRTPLLS 281 (546)
T ss_pred hcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHH----HHHHHHHHHhh---ccc----hhhHHHHHHHHHHHHhhHHHH
Confidence 33221111111 1111112334443322111 11111111110 110 011111111222334567888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCccccccCCCCCCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECC
Q 000522 1179 FLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGR 1258 (1445)
Q Consensus 1179 li~~~~~~e~~~~sv~Ri~~~~~~~~e~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGr 1258 (1445)
++..++.+-++.+|..|+.++...|+.+.-....+-|+|. .||++||.|.|.+.. --+..||++|+.||.|-|+|.
T Consensus 282 ~vgilP~l~~AqvA~~kiakle~~~~~a~~~~~q~~p~~~---~lelrnvrfay~~~~-FhvgPiNl~ikrGelvFliG~ 357 (546)
T COG4615 282 AVGILPTLLTAQVAFNKIAKLELAPYKADFPRPQAFPDWK---TLELRNVRFAYQDNA-FHVGPINLTIKRGELVFLIGG 357 (546)
T ss_pred HHhhhhHHHHHHHHHHHHHHhhcCCccccCCCCCcCCccc---ceeeeeeeeccCccc-ceecceeeEEecCcEEEEECC
Confidence 8999999999999999999987644332222223334464 699999999998654 457889999999999999999
Q ss_pred CCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccH
Q 000522 1259 TGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHV 1338 (1445)
Q Consensus 1259 TGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l 1338 (1445)
+||||||++++|.|+|.|++|+|.+||.+++.-++++.|+-++-|.-|-+||+.++ .|.+..+.+.+..-|++..+
T Consensus 358 NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll----~~e~~as~q~i~~~LqrLel 433 (546)
T COG4615 358 NGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL----GPEGKASPQLIEKWLQRLEL 433 (546)
T ss_pred CCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh----CCccCCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999764 34444677777766766555
Q ss_pred HHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHh--CCCcEEEEeccCh
Q 000522 1339 KEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSE--CKGMTVITIAHRI 1416 (1445)
Q Consensus 1339 ~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~--~~~~TvI~IaHrl 1416 (1445)
.....-. |-... ...||-|||.|+++--|++.+.+|+++||=-+--|+.=.+...+.+-.. -.||||+.|||+-
T Consensus 434 ~~ktsl~--d~~fs--~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd 509 (546)
T COG4615 434 AHKTSLN--DGRFS--NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDD 509 (546)
T ss_pred hhhhccc--CCccc--ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCc
Confidence 4322111 11111 1259999999999999999999999999999999999999887776443 2599999999999
Q ss_pred hHHhhcCEEEEEeCCeEeeec
Q 000522 1417 STVLNMDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1417 ~ti~~~DrI~Vl~~G~vvE~G 1437 (1445)
.....+||++.|++|+++|.-
T Consensus 510 ~YF~~ADrll~~~~G~~~e~t 530 (546)
T COG4615 510 HYFIHADRLLEMRNGQLSELT 530 (546)
T ss_pred hhhhhHHHHHHHhcCceeecc
Confidence 999999999999999999864
No 140
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-40 Score=374.27 Aligned_cols=213 Identities=26% Similarity=0.418 Sum_probs=183.5
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC---CCCcEEEECCeeCCCCChHhhhc
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLRG 1298 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~lR~ 1298 (1445)
.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.|+.+.+...+|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 4789999999963 469999999999999999999999999999999999985 68999999999999888888899
Q ss_pred ceEEEcCCCcccCccHHHhcCCCCC---C------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000522 1299 RFAVVPQSPFLFEGSLRDNLDPFHM---N------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1369 (1445)
Q Consensus 1299 ~i~~VpQdp~lF~gTIReNLdp~~~---~------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1369 (1445)
+++|+||+|.+|+.|+++|+.++.. . .++++.++++.+++.+.+ .....+.+.+||+|||||++||
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv~la 154 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEV-----KDKLKQNALALSGGQQQRLCIA 154 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhh-----hHHhcCCcccCCHHHHHHHHHH
Confidence 9999999999999999999975421 0 112344455555543322 1234556778999999999999
Q ss_pred HHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||++++|+||+|||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 155 ral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 227 (246)
T PRK14269 155 RALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKE 227 (246)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999887678999999999998864 89999999999999998765
No 141
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.8e-40 Score=355.14 Aligned_cols=191 Identities=31% Similarity=0.390 Sum_probs=163.2
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------eEEE
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAY 676 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~y 676 (1445)
.+.+++++..|.. ..+|+|+||+|++||+++|+|||||||||||++|.|...|++|+|.++| .+||
T Consensus 3 ~l~i~~v~~~f~~------~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~ 76 (248)
T COG1116 3 LLEIEGVSKSFGG------VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGY 76 (248)
T ss_pred eEEEEeeEEEeCc------eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEE
Confidence 4678888888764 3459999999999999999999999999999999999999999999987 5899
Q ss_pred EcCCCCCCCc-cHHHHHhcCCCCC-------hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHH
Q 000522 677 VPQVPWILSG-TIRDNILFGKNYD-------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 748 (1445)
Q Consensus 677 ~~Q~p~l~~~-ti~~nI~~g~~~~-------~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARal 748 (1445)
|+|++-|++= ||+|||.||.+.. .++.++.++.++|...-+..| ..||||||||||||||+
T Consensus 77 vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiARAL 145 (248)
T COG1116 77 VFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIARAL 145 (248)
T ss_pred EeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHHHH
Confidence 9999998875 9999999986542 346778888888876655555 48999999999999999
Q ss_pred ccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhh-hCCEEEEEeC--CEEE
Q 000522 749 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDK--GQVK 812 (1445)
Q Consensus 749 y~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~~d~i~~l~~--G~i~ 812 (1445)
..+|++++|||||+|||+.|..++-+.+..-....++|+++|||++++.- -+|||++|.+ |+|.
T Consensus 146 ~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 146 ATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred hcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 99999999999999999999998877744322334689999999999855 4999999998 5553
No 142
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-40 Score=378.87 Aligned_cols=214 Identities=30% Similarity=0.476 Sum_probs=180.4
Q ss_pred EEEEEEEEEeCCCC---CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCC--hHhhh
Q 000522 1223 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--VRDLR 1297 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~--~~~lR 1297 (1445)
|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 79999999997432 46999999999999999999999999999999999999999999999999998754 45788
Q ss_pred cceEEEcCCC--cccCccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCc--hhhhcCCCCCChhHHHHHHHHH
Q 000522 1298 GRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLE--TFVKESGISFSVGQRQLICLAR 1370 (1445)
Q Consensus 1298 ~~i~~VpQdp--~lF~gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLd--t~v~e~G~~LSgGQrQrl~LAR 1370 (1445)
++++||||+| .+|+.|+++|+.+.. ..++++..+. ..+.++.+|++ +........||||||||++|||
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~~LSgGq~qrv~iAr 157 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENR-----VKRAMNIVGLDYEDYKDKSPFELSGGQKRRVAIAG 157 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHHcCCCchhhccCCcccCCHHHHHHHHHHH
Confidence 9999999998 578899999997532 1233322211 11223333554 4455666789999999999999
Q ss_pred HhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCC
Q 000522 1371 ALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1371 ALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||+.+|+||||||||++||+.+.+.+.+.|++..+ +.|||+|||+++.+. .||||++|++|++++.|+|++
T Consensus 158 aL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 158 VVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999987643 789999999999885 589999999999999998865
No 143
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-40 Score=377.29 Aligned_cols=211 Identities=27% Similarity=0.418 Sum_probs=183.0
Q ss_pred cEEEEEEEEEeCCC-CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1222 LIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
.++++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743 34699999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcCCCc--ccCccHHHhcCCCCC---CCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000522 1301 AVVPQSPF--LFEGSLRDNLDPFHM---NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1301 ~~VpQdp~--lF~gTIReNLdp~~~---~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1445)
+|++|+|. ++..|+++||.+... .+. +++.++++.+ |++........+||||||||++||||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~---------gL~~~~~~~~~~LSgGq~qrv~lAra 154 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELV---------GMQDFKEREPARLSGGQKQRVAIAGA 154 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHC---------CCHhHhhCCcccCCHHHHHHHHHHHH
Confidence 99999983 566799999975421 222 2344444444 45444555567899999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|+++|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+..||||++|++|++++.|+|++
T Consensus 155 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~ 226 (279)
T PRK13650 155 VAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRE 226 (279)
T ss_pred HHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999998764 3899999999999998899999999999999998865
No 144
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-40 Score=386.73 Aligned_cols=215 Identities=27% Similarity=0.421 Sum_probs=183.0
Q ss_pred EEEEEEEEEeCC--CCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHh---hh
Q 000522 1223 IEFQNVTMRYKP--SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1297 (1445)
Q Consensus 1223 I~f~nVs~~Y~~--~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR 1297 (1445)
|+++||+++|+. ...++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999972 2347999999999999999999999999999999999999999999999999999887654 47
Q ss_pred cceEEEcCCCcccC-ccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000522 1298 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1445)
Q Consensus 1298 ~~i~~VpQdp~lF~-gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1445)
++++||||++.+|. .|+++|+.+.. ..++++..+ .+.+.++.+|++........+||||||||++|||||+
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~LSgGq~qRv~lAraL~ 156 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELVGLSDKADRYPAQLSGGQKQRVAIARALA 156 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHH
Confidence 89999999999986 69999996431 122222211 1233444556666666667789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1374 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++|+||+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++.
T Consensus 157 ~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~ 228 (343)
T PRK11153 157 SNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEV 228 (343)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999999988643 7899999999999876 899999999999999987653
No 145
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=7.3e-40 Score=332.98 Aligned_cols=208 Identities=28% Similarity=0.366 Sum_probs=182.0
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChH---hhhcc
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1299 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~~ 1299 (1445)
|+|+||+.+|+.+ +++|+||||+|++||.+=++||||||||||+++|++...|++|+|.++|.|+++++.+ -||++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 8999999999877 7899999999999999999999999999999999999999999999999999887654 57999
Q ss_pred eEEEcCCCcccCc-cHHHhcCCCC---CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000522 1300 FAVVPQSPFLFEG-SLRDNLDPFH---MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1300 i~~VpQdp~lF~g-TIReNLdp~~---~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1445)
||+|.||--|... |+.||+.+-- .... +++.++|+.+||.+ ....-...|||||+||+|||||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~---------k~~~lP~~LSGGEQQRvaIARA 151 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKH---------KARALPSQLSGGEQQRVAIARA 151 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccch---------hhhcCccccCchHHHHHHHHHH
Confidence 9999999988765 9999986431 1222 34556666666554 3444566899999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhhc-CEEEEEeCCeEeeecCCC
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNM-DEILILDHGHLPHCGCAA 1440 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~-DrI~Vl~~G~vvE~G~p~ 1440 (1445)
+..+|++||=||||.|||+++...|++.+.+.- .|.||++.||+.+.+.++ -|++.+++|+++....+.
T Consensus 152 iV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~g 222 (223)
T COG2884 152 IVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESRG 222 (223)
T ss_pred HccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccccC
Confidence 999999999999999999999999999998764 599999999999999987 789999999999877654
No 146
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-40 Score=369.65 Aligned_cols=210 Identities=32% Similarity=0.453 Sum_probs=182.7
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+...+...+|++++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999963 46999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEcCCCcccCccHHHhcCCCCCCC---hHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1302 VVPQSPFLFEGSLRDNLDPFHMND---DLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1302 ~VpQdp~lF~gTIReNLdp~~~~s---d~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
|+||+|.+|+.|+++|+....... ++++.+. ++.+|++ ........+||||||||++||||++++|+
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~---------l~~~~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 151 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYY---------LSIVGLNKEYATRDVKNLSGGEAQRVSIARTLANNPE 151 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcHHHHHHHH---------HHHcCCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCC
Confidence 999999999999999997532211 2233333 3344664 23456677899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1378 VLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|||||||++||.++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+|++.
T Consensus 152 llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (241)
T PRK14250 152 VLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDF 219 (241)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 999999999999999999999998763 38999999999999875 899999999999999988653
No 147
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-39 Score=364.87 Aligned_cols=213 Identities=26% Similarity=0.389 Sum_probs=180.4
Q ss_pred cEEEEEEEEEeCCCC--CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHh---h
Q 000522 1222 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---L 1296 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---l 1296 (1445)
.++++||+++|+.+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997532 46999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-cceEEEcCCCcccCc-cHHHhcCCC---CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000522 1297 R-GRFAVVPQSPFLFEG-SLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1297 R-~~i~~VpQdp~lF~g-TIReNLdp~---~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1445)
| ++++|+||+|.+|++ |+++|+.+. .....++..+ .+.+.++.+|++........+||||||||++||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LSgG~~qrl~la~a 159 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS-----RALEMLAAVGLEHRANHRPSELSGGERQRVAIARA 159 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHH
Confidence 3 679999999999876 999998642 1122221111 12333444466666666677899999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCC
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLPHCGCA 1439 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p 1439 (1445)
++++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+..+|++++|++|+|++.|+-
T Consensus 160 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~~ 229 (233)
T PRK11629 160 LVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELSL 229 (233)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEecc
Confidence 999999999999999999999999999998763 48999999999999999999999999999988763
No 148
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=7.2e-40 Score=346.44 Aligned_cols=215 Identities=27% Similarity=0.415 Sum_probs=184.3
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChH---hhh
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLR 1297 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR 1297 (1445)
-.|++++|+++|.. ..|++||||+|++||.+||+|+||||||||++++.|+..|++|+|.|+|.|+.+++.+ .+|
T Consensus 7 ~~I~vr~v~~~fG~--~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 7 PLIEVRGVTKSFGD--RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred ceEEEeeeeeecCC--EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 46999999999964 4799999999999999999999999999999999999999999999999999988864 569
Q ss_pred cceEEEcCCCcccCc-cHHHhcCC-CCCC---ChHHHHHHHHHccHHHHHHhCCCchh-hhcCCCCCChhHHHHHHHHHH
Q 000522 1298 GRFAVVPQSPFLFEG-SLRDNLDP-FHMN---DDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1298 ~~i~~VpQdp~lF~g-TIReNLdp-~~~~---sd~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~~LSgGQrQrl~LARA 1371 (1445)
+++|++.|+..||+. ||+||+.+ ..++ +++++.+. ... .++..||... ..--.+.||||.+.|.+||||
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~l-v~~----KL~~VGL~~~~~~~~PsELSGGM~KRvaLARA 159 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIREL-VLM----KLELVGLRGAAADLYPSELSGGMRKRVALARA 159 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHH-HHH----HHHhcCCChhhhhhCchhhcchHHHHHHHHHH
Confidence 999999999999987 99999974 3333 44444331 111 1222277666 334566899999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+.-+|+|+++|||||+||+-+...+-+.|++.. -+.|+|+|||+++++.. ||||+++.+|+|+-.|+|+++
T Consensus 160 ialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 160 IALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 999999999999999999999999988887754 38999999999999987 599999999999999999876
No 149
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=374.57 Aligned_cols=211 Identities=24% Similarity=0.365 Sum_probs=181.8
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.|+++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999632 46999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcCCC--cccCccHHHhcCCCCC---CCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1302 VVPQSP--FLFEGSLRDNLDPFHM---NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1302 ~VpQdp--~lF~gTIReNLdp~~~---~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
|+||+| .+|..|+++|+.+... .+. +++.++++.+++ ..........||||||||++|||||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L---------~~~~~~~~~~LSgG~~qrv~laraL 153 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRM---------WDFRDKPPYHLSYGQKKRVAIAGVL 153 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCC---------HHHhcCChhhCCHHHHHHHHHHHHH
Confidence 999998 6788999999975321 121 234444554444 3334444557999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCCC
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+++|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .||||++|++|++++.|+|++.
T Consensus 154 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 154 AMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99999999999999999999999999998764 4899999999999985 5899999999999999987643
No 150
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=372.70 Aligned_cols=215 Identities=27% Similarity=0.384 Sum_probs=183.8
Q ss_pred CccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CC
Q 000522 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TP 1292 (1445)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~ 1292 (1445)
.+.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 567999999999964 369999999999999999999999999999999999986 589999999999863 45
Q ss_pred hHhhhcceEEEcCCCcccCccHHHhcCCCC----CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000522 1293 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1364 (1445)
Q Consensus 1293 ~~~lR~~i~~VpQdp~lF~gTIReNLdp~~----~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1364 (1445)
...+|++++|+||+|.+|+.|+++|+.+.. ..+. ++++++++.+++.+. +....++...+||+||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LS~Gq~q 163 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNE-----VKDKLHQSGYSLSGGQQQ 163 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChh-----hHHHHhcCCCCCCHHHHH
Confidence 667899999999999999999999997531 1222 334555555554321 123456667789999999
Q ss_pred HHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|++||||++++|+||||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 164 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 241 (260)
T PRK10744 164 RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDT 241 (260)
T ss_pred HHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999987678899999999999865 89999999999999998764
No 151
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=8e-40 Score=369.78 Aligned_cols=218 Identities=26% Similarity=0.413 Sum_probs=182.8
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhh-hcceE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1301 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1301 (1445)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 478999999963 469999999999999999999999999999999999999999999999999988876654 57799
Q ss_pred EEcCCCcccCc-cHHHhcCCCCCC-ChHHH-------HHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1302 VVPQSPFLFEG-SLRDNLDPFHMN-DDLKI-------WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1302 ~VpQdp~lF~g-TIReNLdp~~~~-sd~ei-------~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
|+||+|.+|++ |+++|+...... ....+ ...-......+.++.+|++...+.....||||||||++||||+
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 158 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRPAGELSYGQQRRLEIARAL 158 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCChhhCCHHHHHHHHHHHHH
Confidence 99999999987 999998643211 00000 0000111234455555777777777778999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+++|++|||||||++||..+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+|++.
T Consensus 159 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (236)
T cd03219 159 ATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEV 230 (236)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHh
Confidence 99999999999999999999999999998764 68999999999999876 899999999999999988654
No 152
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-39 Score=370.02 Aligned_cols=213 Identities=29% Similarity=0.396 Sum_probs=180.8
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCC---hHhhhcc
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---VRDLRGR 1299 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---~~~lR~~ 1299 (1445)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 4789999999642 46999999999999999999999999999999999999999999999999998876 4567889
Q ss_pred eEEEcCCCcccC-ccHHHhcCCCCC------------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1300 FAVVPQSPFLFE-GSLRDNLDPFHM------------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1300 i~~VpQdp~lF~-gTIReNLdp~~~------------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
++|+||++.+|. .|+++|+.+... .+++. .....+.++.+|++......+..||||||||+
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv 153 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEE------KQRALAALERVGLLDKAYQRADQLSGGQQQRV 153 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHH------HHHHHHHHHHcCChhhhCCCcccCCHHHHHHH
Confidence 999999998887 699999964211 11111 01122334444666556667778999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+||||++++|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+. -||+|++|++|++++.|+|++.
T Consensus 154 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (241)
T cd03256 154 AIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAEL 232 (241)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHh
Confidence 99999999999999999999999999999999998864 3899999999999998 5899999999999999988654
No 153
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=376.28 Aligned_cols=215 Identities=26% Similarity=0.385 Sum_probs=183.0
Q ss_pred cEEEEEEEEEeCCCC---CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCC----ChH
Q 000522 1222 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~ 1294 (1445)
.|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 379999999996432 3699999999999999999999999999999999999999999999999999754 346
Q ss_pred hhhcceEEEcCCC--cccCccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHH
Q 000522 1295 DLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICL 1368 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp--~lF~gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~L 1368 (1445)
.+|++|+||||+| .+|+.|+++|+.+.. ..+.++..+. ..+.++.+||++ ..+..+.+||||||||++|
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~l 156 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDLGFSRDVMSQSPFQMSGGQMRKIAI 156 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHcCCChhhhhCCcccCCHHHHHHHHH
Confidence 7899999999998 588889999996532 1232232221 234455558874 4566778999999999999
Q ss_pred HHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCC
Q 000522 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+. .||||++|++|++++.|+|.+
T Consensus 157 araL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~ 232 (286)
T PRK13646 157 VSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKE 232 (286)
T ss_pred HHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999998763 4899999999999886 589999999999999999865
No 154
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.4e-39 Score=362.52 Aligned_cols=202 Identities=29% Similarity=0.395 Sum_probs=171.7
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChH---hhhcc
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1299 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~~ 1299 (1445)
++++|++++|+.+.+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999965434699999999999999999999999999999999999999999999999999876543 47889
Q ss_pred eEEEcCCCcccC-ccHHHhcCCCC---CC----ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000522 1300 FAVVPQSPFLFE-GSLRDNLDPFH---MN----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1300 i~~VpQdp~lF~-gTIReNLdp~~---~~----sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1445)
++|+||+|.+|. .|++||+.... .. .++++.++++.+ |++........+||||||||++||||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LSgG~~qrv~lara 152 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKV---------GLEGKAHALPMQLSGGEQQRVAIARA 152 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc---------CChhhhhCChhhCCHHHHHHHHHHHH
Confidence 999999999887 49999996421 11 123344445444 44444444556899999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeE
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1433 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~v 1433 (1445)
|+++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++
T Consensus 153 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 153 IVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999998763 47999999999999875 799999999985
No 155
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.1e-39 Score=365.09 Aligned_cols=212 Identities=26% Similarity=0.405 Sum_probs=178.8
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhh-hcceE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1301 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1301 (1445)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGK--SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCC--eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 578999999964 369999999999999999999999999999999999999999999999999988877654 67899
Q ss_pred EEcCCCcccCc-cHHHhcCCCCCCC-hHHHHHHHHHccHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1302 VVPQSPFLFEG-SLRDNLDPFHMND-DLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1302 ~VpQdp~lF~g-TIReNLdp~~~~s-d~ei~~aL~~~~l~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
|+||++.+|++ |+++|+.+..... +.+..+. +.+.++.+ +++...+.....||+|||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p~l 153 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKAR-----LERVYELFPRLKERRKQLAGTLSGGEQQMLAIARALMSRPKL 153 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHHH-----HHHHHHHHHhhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999987 9999996542211 1111111 12223333 355555666678999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|+|||||++||.++.+.+.+.|++.. +++|+|++||+++.+.+ ||+|++|++|++++.|++++
T Consensus 154 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 218 (222)
T cd03224 154 LLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAE 218 (222)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHH
Confidence 99999999999999999999998764 57999999999998766 89999999999999988754
No 156
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-39 Score=362.21 Aligned_cols=206 Identities=29% Similarity=0.440 Sum_probs=173.3
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+. .|++++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEEE
Confidence 478999999964 469999999999999999999999999999999999999999999999999986543 5778999
Q ss_pred EcCCCcccC-ccHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1303 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1303 VpQdp~lF~-gTIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
+||+|.+|. .|+++|+..... .+.++..+ ...+.++.+|++........+||||||||++|||||+++|++
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~ 151 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRA-----RVRELLELVGLEGLLNRYPHELSGGQQQRVALARALAREPSL 151 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999886 599999964311 11111111 122334444666556666678999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeec
Q 000522 1379 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G 1437 (1445)
|||||||++||+++.+.+.+.|++.. .++|||++||+++.+.+ ||+|++|++|++++.|
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 152 LLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999998864 38999999999998765 8999999999999876
No 157
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.1e-39 Score=364.06 Aligned_cols=206 Identities=29% Similarity=0.390 Sum_probs=174.6
Q ss_pred EEEEEEEEEeCCCC--CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHh----h
Q 000522 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD----L 1296 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~----l 1296 (1445)
++++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996531 46999999999999999999999999999999999999999999999999998877433 4
Q ss_pred hcceEEEcCCCcccCc-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1297 RGRFAVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1297 R~~i~~VpQdp~lF~g-TIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
|++++|+||+|.+|.+ |++||+..... ....+. ...+.+.++.+|++........+||||||||++||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al 155 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERVGLGDRLNHYPSELSGGQQQRVAIARAL 155 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHcCCchhhhcChhhcCHHHHHHHHHHHHH
Confidence 6789999999999987 99999975321 111111 11233444555777666667778999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhhcCEEEEEeCCeE
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHL 1433 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~v 1433 (1445)
+++|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|++
T Consensus 156 ~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 156 ANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred ccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999988754 7999999999999888999999999985
No 158
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2e-39 Score=368.14 Aligned_cols=213 Identities=29% Similarity=0.388 Sum_probs=179.9
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCCh---Hhhhcc
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1299 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1299 (1445)
++++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 2 l~~~~l~~~~~~-~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPN-GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCC-CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 689999999962 2469999999999999999999999999999999999999999999999999987654 346889
Q ss_pred eEEEcCCCcccC-ccHHHhcCCCCC------------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1300 FAVVPQSPFLFE-GSLRDNLDPFHM------------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1300 i~~VpQdp~lF~-gTIReNLdp~~~------------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
++|+||++.+|. .|+++|+..... ..+++ .....+.++.+|++........+||||||||+
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv 154 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEED------KERALSALERVGLADKAYQRADQLSGGQQQRV 154 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHH------HHHHHHHHHHcCcHhhhcCCcccCCHHHHHHH
Confidence 999999999887 599999964211 01110 11123334444666556667778999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|||||+++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|++++.|+|++.
T Consensus 155 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 155 AIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 99999999999999999999999999999999998764 37899999999999865 899999999999999998764
No 159
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=2.3e-39 Score=349.40 Aligned_cols=178 Identities=33% Similarity=0.547 Sum_probs=166.6
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+++|++++|+...+++++|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 578999999975444699999999999999999999999999999999999999999999999998776 6678899999
Q ss_pred EcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000522 1303 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1445)
Q Consensus 1303 VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1445)
+||+|.+|++|++||+ ..+||+|||||++||||++++|++||||
T Consensus 80 ~~q~~~~~~~tv~~~i------------------------------------~~~LS~G~~qrv~laral~~~p~~lllD 123 (178)
T cd03247 80 LNQRPYLFDTTLRNNL------------------------------------GRRFSGGERQRLALARILLQDAPIVLLD 123 (178)
T ss_pred EccCCeeecccHHHhh------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999997 3479999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeec
Q 000522 1383 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1383 EaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G 1437 (1445)
|||++||.++.+.+.+.|++..+++|+|+++|+++.+..||++++|++|++++.|
T Consensus 124 EP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 124 EPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999998877789999999999999999999999999999865
No 160
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-39 Score=375.12 Aligned_cols=215 Identities=29% Similarity=0.444 Sum_probs=180.5
Q ss_pred EEEEEEEEEeCCCC---CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCC----CChHh
Q 000522 1223 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----TPVRD 1295 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~----i~~~~ 1295 (1445)
|+++||+++|++.. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997432 259999999999999999999999999999999999999999999999999863 34567
Q ss_pred hhcceEEEcCCC--cccCccHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHH
Q 000522 1296 LRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLA 1369 (1445)
Q Consensus 1296 lR~~i~~VpQdp--~lF~gTIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LA 1369 (1445)
+|++++||+|+| .+|..|+.+|+.+... .+.+++.+ ...+.++.+|++ ........+||||||||++||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~~LSgGqkqrvaiA 156 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK-----IAAEKLEMVGLADEFWEKSPFELSGGQMRRVAIA 156 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCCChhhccCCcccCCHHHHHHHHHH
Confidence 899999999998 7899999999975321 22222211 112333334664 234566678999999999999
Q ss_pred HHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCCC
Q 000522 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .||||++|++|++++.|+|++.
T Consensus 157 ~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 157 GILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999998754 4899999999999885 5999999999999999998763
No 161
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-39 Score=366.10 Aligned_cols=211 Identities=28% Similarity=0.384 Sum_probs=177.9
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 3 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 78 (239)
T cd03296 3 IEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGF 78 (239)
T ss_pred EEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEE
Confidence 789999999964 469999999999999999999999999999999999999999999999999876653 3678999
Q ss_pred EcCCCcccC-ccHHHhcCCCCCC-------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000522 1303 VPQSPFLFE-GSLRDNLDPFHMN-------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1445)
Q Consensus 1303 VpQdp~lF~-gTIReNLdp~~~~-------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1445)
+||+|.+|. .|+++|+.+.... +..+.. ..+.+.++.+|++........+||+|||||++|||||++
T Consensus 79 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~ 153 (239)
T cd03296 79 VFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIR-----AKVHELLKLVQLDWLADRYPAQLSGGQRQRVALARALAV 153 (239)
T ss_pred EecCCcccCCCCHHHHHhhhhhhccccccCCHHHHH-----HHHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHHhc
Confidence 999999986 5999999753211 111111 112333444466655566667899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1375 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|++|||||||++||+++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|++++.|+|++.
T Consensus 154 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 224 (239)
T cd03296 154 EPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEV 224 (239)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHH
Confidence 9999999999999999999999999987643 7899999999998765 899999999999999998653
No 162
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2e-39 Score=362.01 Aligned_cols=209 Identities=27% Similarity=0.427 Sum_probs=175.7
Q ss_pred EEEEEEEEEeCCCC--CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 68999999996432 269999999999999999999999999999999999999999999999999976 346778999
Q ss_pred EEEcCCCcccCc-cHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
+|+||+|.+|++ |++||+.... ..+.++..+ ...+.++.+|++........+||||||||++||||++++|
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA-----RLEELADRLGMEELLDRRVGGFSTGMRQKVAIARALVHDP 155 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHHhhhhhhcCHHHHHHHHHHHHHhcCC
Confidence 999999999986 9999985321 112211111 1123334446655566667789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeec
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G 1437 (1445)
+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++++.|
T Consensus 156 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 156 PVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999998764 48999999999998875 8999999999999865
No 163
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.1e-39 Score=355.52 Aligned_cols=197 Identities=30% Similarity=0.473 Sum_probs=179.2
Q ss_pred EEEEEEEEEeCCCC---CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcc
Q 000522 1223 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1299 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1299 (1445)
++++||+++|++.. +++|+|+||+|++||+++|+|++|||||||+++|.|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57999999997542 4699999999999999999999999999999999999999999999999 6
Q ss_pred eEEEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1300 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1300 i~~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
++|+||+|.+|++|++||+.+....++++.+++++.+++.+.+..+ |+++.+++.+.+||+|||||++||||++++|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999876555666788888899998888877 89999998889999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHH-HHHHhC-CCcEEEEeccChhHHhhcCEEEEEeCCe
Q 000522 1378 VLCLDECTANVDAQTASILQN-AISSEC-KGMTVITIAHRISTVLNMDEILILDHGH 1432 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~-~I~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1432 (1445)
+++|||||++||.++.+.+.+ .+++.. +++|||++||+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999877766 566553 4689999999999999999999999985
No 164
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-39 Score=368.69 Aligned_cols=213 Identities=29% Similarity=0.426 Sum_probs=181.9
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999753 469999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EcCCCcccC-ccHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCch--hhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1303 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLET--FVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1303 VpQdp~lF~-gTIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt--~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
+||+|.+|+ .|++||+..... .+.++. .....+.++.+|++. .....+.+||+|||||++||||++++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p 154 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALVGLDPAEFADRYPHELSGGQQQRVGVARALAADP 154 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHcCCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999986 599999964321 111111 112234455556664 556667789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
++|+|||||++||+++.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|++++
T Consensus 155 ~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 222 (242)
T cd03295 155 PLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDE 222 (242)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 9999999999999999999999998864 38999999999998765 89999999999999998754
No 165
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-39 Score=371.36 Aligned_cols=215 Identities=24% Similarity=0.425 Sum_probs=184.5
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++|++++|+++.+++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 58999999999744457999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcCCC--cccCccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1302 VVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1302 ~VpQdp--~lF~gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
|+||+| .++..|+++|+.+.. ..++++..+ .+.+.++.+|++........+||+|||||++|||||+++|
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKVGMEDYLDKEPQNLSGGQKQRVAIASVLALNP 161 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHcCCHHHhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 999998 455679999997531 123332221 1223344446666666677799999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|++++
T Consensus 162 ~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~ 228 (271)
T PRK13632 162 EIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKE 228 (271)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHH
Confidence 99999999999999999999999988643 589999999999998899999999999999998765
No 166
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=370.08 Aligned_cols=214 Identities=29% Similarity=0.408 Sum_probs=181.7
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1294 (1445)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 369999999999999999999999999999999999975 589999999999875 3455
Q ss_pred hhhcceEEEcCCCcccCccHHHhcCCC----CCCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPF----HMND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~gTIReNLdp~----~~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
.+|++++|+||++.+|++|+++|+.+. +... ++++.++++.+++.+.+ +...+....+||||||||+
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq~qrv 158 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEV-----KDRLHESALGLSGGQQQRL 158 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhh-----hHHhhCCcccCCHHHHHHH
Confidence 778999999999999999999999642 1111 23445555555553322 2234556678999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+||||++++|+||||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+|++.
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 159 CIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999987668999999999999865 899999999999999988653
No 167
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.1e-39 Score=361.23 Aligned_cols=207 Identities=25% Similarity=0.377 Sum_probs=175.0
Q ss_pred EEEEEEEEEeCCCC--CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHh---hh
Q 000522 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LR 1297 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR 1297 (1445)
++++||+++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+...+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996432 46999999999999999999999999999999999999999999999999998887654 34
Q ss_pred -cceEEEcCCCcccC-ccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1298 -GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1298 -~~i~~VpQdp~lF~-gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
++++|+||+|.+|+ .|++||+.... ..+..+.. + ...+.++.+|++.........||||||||++||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~---~--~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral 156 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAK---E--RAYEMLEKVGLEHRINHRPSELSGGERQRVAIARAL 156 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHH---H--HHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 68999999999986 59999996521 11211111 1 123344445776666666778999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhhcCEEEEEeCCeEe
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLP 1434 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vv 1434 (1445)
+++|+||||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+..+|+|++|++|+++
T Consensus 157 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 157 VNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred hCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999998764 378999999999999999999999999986
No 168
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=369.81 Aligned_cols=215 Identities=26% Similarity=0.389 Sum_probs=182.5
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CCh
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1293 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~ 1293 (1445)
..++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 6 AIIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred ceEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 36999999999964 4699999999999999999999999999999999999997 48999999999863 345
Q ss_pred HhhhcceEEEcCCCcccCccHHHhcCCCCC----CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000522 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1445)
Q Consensus 1294 ~~lR~~i~~VpQdp~lF~gTIReNLdp~~~----~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1365 (1445)
..+|++++|+||++.+|..|++||+.+... .+ ++++.++++.+++.+.+ +........+||||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LSgG~~qr 158 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV-----KDKLNTNALSLSGGQQQR 158 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh-----HHHHhCCcccCCHHHHHH
Confidence 677899999999999999999999965321 11 23455566666553322 122344566899999999
Q ss_pred HHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++|||||+++|++|||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.+ ||||++|++|++++.|+|++.
T Consensus 159 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 159 LCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999988678999999999999865 899999999999999998654
No 169
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-39 Score=372.03 Aligned_cols=211 Identities=25% Similarity=0.422 Sum_probs=183.3
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++||+++|+...+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999754456999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcCCC--cccCccHHHhcCCCCC---CChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1302 VVPQSP--FLFEGSLRDNLDPFHM---NDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1302 ~VpQdp--~lF~gTIReNLdp~~~---~sd~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
|+||+| .+++.|+++||.+... .+.+ ++.++++.+ ||+.........||||||||++|||||
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~---------gL~~~~~~~~~~LS~G~~qrv~laral 155 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQV---------GMEDFLNREPHRLSGGQKQRVAIAGVL 155 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHc---------CChhhhhCCcccCCHHHHHHHHHHHHH
Confidence 999998 4667899999975321 2222 233334443 555555555668999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|++++.|++++
T Consensus 156 ~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (279)
T PRK13635 156 ALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEE 226 (279)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999987653 799999999999999999999999999999998764
No 170
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=370.91 Aligned_cols=217 Identities=25% Similarity=0.373 Sum_probs=184.1
Q ss_pred CCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--C
Q 000522 1219 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--T 1291 (1445)
Q Consensus 1219 ~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i 1291 (1445)
....|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .
T Consensus 10 ~~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~ 87 (269)
T PRK14259 10 KNIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRV 87 (269)
T ss_pred CCceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccC
Confidence 3457999999999964 369999999999999999999999999999999999987 589999999999863 5
Q ss_pred ChHhhhcceEEEcCCCcccCccHHHhcCCCCC---CC---hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000522 1292 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1445)
Q Consensus 1292 ~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~---~s---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1365 (1445)
+...+|++++|+||+|.+|+.|++||+.+... .. ++++.++++.++++. +++........+||+|||||
T Consensus 88 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~l~~~~~~~~~~LS~G~~qr 162 (269)
T PRK14259 88 DPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWD-----ECKDKLNESGYSLSGGQQQR 162 (269)
T ss_pred CHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcc-----hhhhhhCCCcccCCHHHHHH
Confidence 66788899999999999999999999975422 11 234455566655432 22334455566899999999
Q ss_pred HHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeC-----------CeE
Q 000522 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDH-----------GHL 1433 (1445)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~-----------G~v 1433 (1445)
++||||++++|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.+ ||+|++|++ |++
T Consensus 163 l~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~ 242 (269)
T PRK14259 163 LCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYL 242 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceE
Confidence 99999999999999999999999999999999999987668999999999998865 899999996 679
Q ss_pred eeecCCCCC
Q 000522 1434 PHCGCAAAP 1442 (1445)
Q Consensus 1434 vE~G~p~~~ 1442 (1445)
+|.|+|++.
T Consensus 243 ~~~~~~~~~ 251 (269)
T PRK14259 243 VEFNETKKI 251 (269)
T ss_pred EEeCCHHHH
Confidence 999988653
No 171
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-39 Score=372.55 Aligned_cols=215 Identities=27% Similarity=0.392 Sum_probs=181.9
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCC--CCChHhhhcc
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII--NTPVRDLRGR 1299 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~--~i~~~~lR~~ 1299 (1445)
.|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+. ..+...+|++
T Consensus 5 ~l~~~~l~~~~~~-~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSD-GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCC-CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 5899999999963 346999999999999999999999999999999999999999999999999984 3445678999
Q ss_pred eEEEcCCC--cccCccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000522 1300 FAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1445)
Q Consensus 1300 i~~VpQdp--~lF~gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1445)
++|+||+| .+|+.|+++|+.+.. ..+.++.++. ..+.++.+|++........+||+|||||++|||||+.
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~LS~G~~qrl~laraL~~ 158 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRTGIEHLKDKPTHCLSFGQKKRVAIAGVLVM 158 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHCCChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999998 578899999996521 1232222211 1223333456555566777899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCCC
Q 000522 1375 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+. .||||++|++|++++.|++++.
T Consensus 159 ~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~ 229 (283)
T PRK13636 159 EPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEV 229 (283)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999987753 799999999999987 5999999999999999998753
No 172
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-39 Score=366.39 Aligned_cols=215 Identities=28% Similarity=0.402 Sum_probs=180.4
Q ss_pred EEEEEEEEEeCCC--CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChH---hhh
Q 000522 1223 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLR 1297 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR 1297 (1445)
|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 7899999999643 12699999999999999999999999999999999999999999999999999877654 347
Q ss_pred cceEEEcCCCcccC-ccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000522 1298 GRFAVVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1445)
Q Consensus 1298 ~~i~~VpQdp~lF~-gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1445)
++++|+||+|.+|. .|++||+.... ..+..+.. ....+.++.+|++........+||+|||||++||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~ 156 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIE-----ERVLELLELVGLEDKADAYPAQLSGGQKQRVGIARALA 156 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHCCChhhhhcChhhCCHHHHHHHHHHHHHh
Confidence 89999999999997 59999986421 11211111 11233444446665556666789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1374 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++|++|||||||++||+.+.+.+.+.|++.. .++|||++||+++.+.. ||+|++|++|++++.|++++.
T Consensus 157 ~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (233)
T cd03258 157 NNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEV 228 (233)
T ss_pred cCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999998764 37999999999999876 899999999999999987654
No 173
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3e-39 Score=367.41 Aligned_cols=212 Identities=30% Similarity=0.446 Sum_probs=179.6
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC-----CcEEEECCeeCCCC--ChHh
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIINT--PVRD 1295 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~i--~~~~ 1295 (1445)
++++||+++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +...
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGE--KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECC--eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 789999999964 35999999999999999999999999999999999999998 99999999999763 4567
Q ss_pred hhcceEEEcCCCcccCccHHHhcCCCC---C-CCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000522 1296 LRGRFAVVPQSPFLFEGSLRDNLDPFH---M-NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1367 (1445)
Q Consensus 1296 lR~~i~~VpQdp~lF~gTIReNLdp~~---~-~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1367 (1445)
.|++++|+||++.+|+.|+++|+.... . .+. +++.++++..++.+.++ ........+||||||||++
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----~~~~~~~~~LSgG~~qrv~ 154 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-----DRLHDSALGLSGGQQQRLC 154 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-----hHhhCCcccCCHHHHHHHH
Confidence 788999999999999999999996421 1 111 22333444443321110 4455666789999999999
Q ss_pred HHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||||++++|+++||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+|++
T Consensus 155 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 229 (247)
T TIGR00972 155 IARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQ 229 (247)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999987667999999999998865 89999999999999998864
No 174
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.5e-39 Score=365.41 Aligned_cols=211 Identities=28% Similarity=0.424 Sum_probs=180.7
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.+. +++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998776544 468999
Q ss_pred EcCCCccc-CccHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1303 VPQSPFLF-EGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1303 VpQdp~lF-~gTIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
+||++.++ ..|+++|+..... .+.++.. ....+.++.+|++...+....+||||||||++||||++++|+|
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~laral~~~p~l 153 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARLGLAERADDKVRELNGGHRRRVEIARALLHRPAL 153 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999874 5799999965321 1211111 1223445555777767777778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++++.|+|++
T Consensus 154 lllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~ 218 (236)
T TIGR03864 154 LLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAE 218 (236)
T ss_pred EEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHH
Confidence 99999999999999999999998764 4799999999999998899999999999999998754
No 175
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-39 Score=380.33 Aligned_cols=209 Identities=27% Similarity=0.409 Sum_probs=180.7
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
..|+++|++++|+. .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+.+++ |+++
T Consensus 5 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 5 NFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred cEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 46999999999963 4699999999999999999999999999999999999999999999999999887754 6789
Q ss_pred EEEcCCCcccCc-cHHHhcCCCCC---CChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFHM---NDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~~---~sd~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
++|+|++.+|+. |++||+.+.-. .+++ ++.++++.. |++.........||||||||++|||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~---------gl~~~~~r~~~~LSgGq~QRVaLARaL 151 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELV---------DLAGFEDRYVDQISGGQQQRVALARAL 151 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHc---------CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 999999999986 99999975421 2222 333444444 444444555678999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+++|+||+||||||+||..+.+.+++.|++..+ ++|+|+|||+++.+.. ||||+||++|+|++.|+|++.
T Consensus 152 ~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~ 224 (351)
T PRK11432 152 ILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQEL 224 (351)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999999999999999999999987654 7999999999998865 899999999999999999753
No 176
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-39 Score=381.90 Aligned_cols=209 Identities=22% Similarity=0.316 Sum_probs=179.7
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++|++++|+. ..++|+|+||+|++||.++|+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ +++|+
T Consensus 3 ~l~i~~l~~~~~~-~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDG-KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCC-CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999942 24699999999999999999999999999999999999999999999999999988764 47899
Q ss_pred EEcCCCcccCc-cHHHhcCCCCC---CChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000522 1302 VVPQSPFLFEG-SLRDNLDPFHM---NDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1445)
Q Consensus 1302 ~VpQdp~lF~g-TIReNLdp~~~---~sd~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1445)
||||++.+|+. |+++|+.+... .+.. ++.++++.+ |++........+||||||||++|||||+
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~---------gL~~~~~~~~~~LSgGq~QRvalARAL~ 150 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARIL---------ELEPLLDRKPRELSGGQRQRVAMGRAIV 150 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHc---------CChhHhhCChhhCCHHHHHHHHHHHHHh
Confidence 99999999975 99999975422 2222 233344444 5555555566689999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCCC
Q 000522 1374 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++|+||+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+. -||+|++|++|++++.|+|++.
T Consensus 151 ~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~ 222 (356)
T PRK11650 151 REPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEV 222 (356)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHH
Confidence 99999999999999999999999999987643 789999999999776 4899999999999999998764
No 177
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-39 Score=344.13 Aligned_cols=202 Identities=25% Similarity=0.377 Sum_probs=171.8
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
|+++|++..|.. ..+++|+||+|++||+++++|||||||||+||+|.++++|++|+|.++|
T Consensus 2 I~~~nvsk~y~~------~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr 75 (309)
T COG1125 2 IEFENVSKRYGN------KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRR 75 (309)
T ss_pred ceeeeeehhcCC------ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHH
Confidence 678999998862 3459999999999999999999999999999999999999999999987
Q ss_pred eEEEEcCCCCCCC-ccHHHHHhcCC---CCChh----hHHHHHHHhcchH-HHhhccCCCcccccCCCCccchHHHHHHH
Q 000522 673 SIAYVPQVPWILS-GTIRDNILFGK---NYDPQ----SYSETLKACTLDV-DISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1445)
Q Consensus 673 ~i~y~~Q~p~l~~-~ti~~nI~~g~---~~~~~----~~~~v~~~~~l~~-d~~~~~~gd~t~vg~~g~~LSGGQkqRv~ 743 (1445)
+||||-|+.-||+ .||.|||..-. .++++ +.++.++..+|+. +. .......|||||+|||.
T Consensus 76 ~IGYviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~----------~~RyP~eLSGGQQQRVG 145 (309)
T COG1125 76 KIGYVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEY----------ADRYPHELSGGQQQRVG 145 (309)
T ss_pred hhhhhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHH----------hhcCchhcCcchhhHHH
Confidence 5999999999986 59999998743 35554 4556666777764 22 23445689999999999
Q ss_pred HHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchh-hhhCCEEEEEeCCEEEEecCHhHHHh
Q 000522 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 744 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~-l~~~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
+||||..+|+|+|+||||+||||-+..++-+....-...-++|+|+|||++++ ++-+|||.+|++|+|+..++++++..
T Consensus 146 v~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 146 VARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILA 225 (309)
T ss_pred HHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHh
Confidence 99999999999999999999999999888776433223347899999999987 45699999999999999999999986
Q ss_pred c
Q 000522 823 S 823 (1445)
Q Consensus 823 ~ 823 (1445)
+
T Consensus 226 ~ 226 (309)
T COG1125 226 N 226 (309)
T ss_pred C
Confidence 5
No 178
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-39 Score=356.73 Aligned_cols=202 Identities=29% Similarity=0.454 Sum_probs=174.7
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+++||+++|+. .++|+|+||+|++| ++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 i~~~~~~~~~~~--~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK--KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC--EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 579999999964 36999999999999 99999999999999999999999999999999999998776 778999999
Q ss_pred EcCCCcccCc-cHHHhcCCCC---CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000522 1303 VPQSPFLFEG-SLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1445)
Q Consensus 1303 VpQdp~lF~g-TIReNLdp~~---~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1445)
+||+|.+|.+ |+++|+.... ..+ ++++.++++..++.+ .......+||+|||||++||||+++
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~---------~~~~~~~~LS~G~~qrv~la~al~~ 147 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGD---------RAKKKIGSLSGGMRRRVGIAQALVG 147 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHH---------HHhCchhhCCHHHHHHHHHHHHHhc
Confidence 9999999986 9999986421 111 223445555555443 3334445799999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeec
Q 000522 1375 SSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G 1437 (1445)
+|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 148 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 148 DPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999987767999999999999875 8999999999999875
No 179
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=3.1e-39 Score=376.46 Aligned_cols=214 Identities=28% Similarity=0.376 Sum_probs=180.1
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
..|+++|++++|+. ..+|+||||+|++||++||+||||||||||+++|.|+++|++|+|.++|.|+...+ ...|+++
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 46999999999964 46999999999999999999999999999999999999999999999999997755 4578999
Q ss_pred EEEcCCCcccC-ccHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1301 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1301 ~~VpQdp~lF~-gTIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
+|+||+|.+|. .|++||+.++.. .++.+..+. ..+.++.+|+.........+||+|||||++|||||+.+|
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P 157 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARAL-----VPPLLEFAKLENKADAKVGELSGGMKRRLTLARALVNDP 157 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCchHhcCchhhCCHHHHHHHHHHHHHhCCC
Confidence 99999999886 599999975332 122222111 122333334443334444579999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++|+|||||++||+.+.+.+.+.|++.. +++|||++||+++.+.. ||||++|++|++++.|+|++.
T Consensus 158 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l 225 (306)
T PRK13537 158 DVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHAL 225 (306)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999998864 47999999999999976 899999999999999998764
No 180
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=5e-39 Score=380.20 Aligned_cols=212 Identities=28% Similarity=0.404 Sum_probs=182.8
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++|++++|+. ..+|+|+||+|++||+++|+||||||||||+++|.|+.+|++|+|.+||.++.+.+++ |++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 4899999999964 4699999999999999999999999999999999999999999999999999887764 67899
Q ss_pred EEcCCCcccC-ccHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1302 VVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1302 ~VpQdp~lF~-gTIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
||+|++.+|+ .|++||+.+... .+..+.. ....+.++.+||+........+||||||||++|||||+++|+
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~-----~~~~~~l~~l~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~ 154 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVA-----ERVAELLDLVGLPGSERKYPGQLSGGQQQRVALARALATSPG 154 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCCchhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999997 599999975421 2222221 123344455577766777778999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1378 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||++|++|++++.|+|++.
T Consensus 155 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~ 222 (353)
T TIGR03265 155 LLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEI 222 (353)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 9999999999999999999999987643 7899999999998765 899999999999999998754
No 181
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-39 Score=373.27 Aligned_cols=214 Identities=28% Similarity=0.397 Sum_probs=180.1
Q ss_pred EEEEEEEEEeCCCC---CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCC----CChHh
Q 000522 1223 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----TPVRD 1295 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~----i~~~~ 1295 (1445)
++++|++++|+... .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 79999999996432 469999999999999999999999999999999999999999999999999863 34567
Q ss_pred hhcceEEEcCCC--cccCccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000522 1296 LRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1369 (1445)
Q Consensus 1296 lR~~i~~VpQdp--~lF~gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LA 1369 (1445)
.|++++|+||+| .+|+.|+++|+.+.. ..+.++..+. ..+.++.+||+. ........||+|||||++||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~~~~~~~~~~LSgGq~qrv~lA 157 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQK-----AREMIELVGLPEELLARSPFELSGGQMRRVAIA 157 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHCCCChhhhhCCcccCCHHHHHHHHHH
Confidence 888999999998 688889999996432 1233332211 223344446653 34556678999999999999
Q ss_pred HHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|||+.+|+||||||||++||+.+...+.+.|++.. .+.|||+|||+++.+.. ||||++|++|++++.|+|++
T Consensus 158 raL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 158 GVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999998764 37899999999999865 89999999999999998765
No 182
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-39 Score=346.36 Aligned_cols=196 Identities=28% Similarity=0.377 Sum_probs=167.5
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.+++++|+.+|.. ..||+|+||+|++||.|+|+||||||||||++++.|+.+|++|+|.+||.++..- ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 5899999999976 5799999999999999999999999999999999999999999999999988433 45799
Q ss_pred EEcCCCcccCc-cHHHhcCCCCCC---C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000522 1302 VVPQSPFLFEG-SLRDNLDPFHMN---D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1445)
Q Consensus 1302 ~VpQdp~lF~g-TIReNLdp~~~~---s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1445)
||+|++.||+= ||++|+...-+. + .+...+.|+.+||. ..-+.-...||||||||++|||||+
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~---------~~~~~~P~qLSGGMrQRVaiARAL~ 146 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLA---------GFEDKYPHQLSGGMRQRVAIARALA 146 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCc---------chhhcCccccChHHHHHHHHHHHHh
Confidence 99999999996 999998654322 1 22344555555544 4445567789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHh-hcCEEEEEeC--CeE
Q 000522 1374 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDH--GHL 1433 (1445)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrI~Vl~~--G~v 1433 (1445)
.+|+||+||||.++||+.|...+|+-+.+.. .++||++|||+.+... -+|||+||.+ |+|
T Consensus 147 ~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 147 TRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred cCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999999887764 3699999999998755 5899999999 555
No 183
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.7e-39 Score=357.17 Aligned_cols=204 Identities=31% Similarity=0.467 Sum_probs=173.1
Q ss_pred EEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEE
Q 000522 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1445)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1445)
+++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 47899999975334699999999999999999999999999999999999999999999999999888888889999999
Q ss_pred cCCCc--ccCccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1304 PQSPF--LFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1304 pQdp~--lF~gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
||+|. ++..|+++|+.+.. ..++.+..+ ...+.++.+|++.........||||||||++|||||+++|++
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~l 155 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELVGLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDI 155 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 99983 67789999996531 112221111 122334444666556666778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCe
Q 000522 1379 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGH 1432 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1432 (1445)
|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|+
T Consensus 156 lllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 156 LLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999998764 47999999999999987 99999999985
No 184
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-39 Score=368.18 Aligned_cols=213 Identities=25% Similarity=0.333 Sum_probs=180.0
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCC--CCChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII--NTPVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~--~i~~~ 1294 (1445)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 4899999999964 4699999999999999999999999999999999999987 4999999999997 45666
Q ss_pred hhhcceEEEcCCCcccCc-cHHHhcCCCC---C--CCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH---M--NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1364 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~g-TIReNLdp~~---~--~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1364 (1445)
.+|++++++||+|.+|++ |+++|+.... . ... +++.++++..++.+.+ .........+|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~q 156 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEV-----KDRLNDYPSNLSGGQRQ 156 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccch-----hhhhccChhhCCHHHHH
Confidence 788999999999999976 9999996421 1 011 2344444444433211 12345556689999999
Q ss_pred HHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|++||||++++|++|||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+|++
T Consensus 157 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (253)
T PRK14267 157 RLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRK 234 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999987667999999999999875 89999999999999998865
No 185
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-39 Score=371.64 Aligned_cols=216 Identities=24% Similarity=0.322 Sum_probs=179.6
Q ss_pred cEEEEEEEEEeCCCC---CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCC--------
Q 000522 1222 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN-------- 1290 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~-------- 1290 (1445)
.|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 389999999996532 269999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CChHhhhcceEEEcCCC--cccCccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCc-
Q 000522 1291 ----------------TPVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLE- 1348 (1445)
Q Consensus 1291 ----------------i~~~~lR~~i~~VpQdp--~lF~gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLd- 1348 (1445)
.+...+|++++||||+| .+|..|+++||.+.. ..+.+++.+. ..+.++.+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~gL~~ 156 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKR-----AAKYIELVGLDE 156 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHcCCCh
Confidence 13457889999999987 688889999997542 1233332221 12233344665
Q ss_pred hhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHh-hcCEEE
Q 000522 1349 TFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEIL 1426 (1445)
Q Consensus 1349 t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrI~ 1426 (1445)
...+....+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+. .||||+
T Consensus 157 ~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~ 236 (305)
T PRK13651 157 SYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTI 236 (305)
T ss_pred hhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEE
Confidence 34566677899999999999999999999999999999999999999999998753 4899999999999875 589999
Q ss_pred EEeCCeEeeecCCCCC
Q 000522 1427 ILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1427 Vl~~G~vvE~G~p~~~ 1442 (1445)
+|++|++++.|+|++.
T Consensus 237 vl~~G~i~~~g~~~~~ 252 (305)
T PRK13651 237 FFKDGKIIKDGDTYDI 252 (305)
T ss_pred EEECCEEEEECCHHHH
Confidence 9999999999998763
No 186
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=8.7e-39 Score=353.18 Aligned_cols=198 Identities=26% Similarity=0.403 Sum_probs=169.3
Q ss_pred EEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEE
Q 000522 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1445)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1445)
+++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 468999999642 469999999999999999999999999999999999999999999999999864 4567889999
Q ss_pred cCCC--cccCccHHHhcCCCCC-C--ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1304 PQSP--FLFEGSLRDNLDPFHM-N--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1304 pQdp--~lF~gTIReNLdp~~~-~--sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
||+| .+|..|++||+..+.. . .++++.++++.+++. .........||||||||++||||++++|++
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~---------~~~~~~~~~LS~G~~qrv~laral~~~p~l 147 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLY---------ALKERHPLSLSGGQKQRLAIAAALLSGKDL 147 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCc---------hhcCCCchhCCHHHHHHHHHHHHHHhCCCE
Confidence 9998 4678899999975422 1 223455556555544 334444457999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHh-CCCcEEEEeccChhHHhh-cCEEEEEeCCeEe
Q 000522 1379 LCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLN-MDEILILDHGHLP 1434 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~-~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vv 1434 (1445)
|+|||||++||+++.+.+.+.|++. .+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 148 LIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999876 358999999999999875 8999999999985
No 187
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.3e-39 Score=363.30 Aligned_cols=218 Identities=22% Similarity=0.355 Sum_probs=183.7
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhh-hcce
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1300 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1300 (1445)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |+++
T Consensus 2 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 2 ILYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred eEEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 3789999999964 469999999999999999999999999999999999999999999999999988776654 5679
Q ss_pred EEEcCCCcccCc-cHHHhcCCCCCCChHHH-------HHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFHMNDDLKI-------WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~~~sd~ei-------~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
+|+||++.+|++ |+++|+....... ..+ ........+.+.++.+|++.........||||||||++||||+
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~Ge~qrv~laral 158 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRD-KSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLAGLLSHGQKQWLEIGMLL 158 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcc-cccccccccccHHHHHHHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 999999999987 9999997532110 000 0000111233444555777666777778999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+++|++|+|||||++||+++.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++.
T Consensus 159 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~ 229 (242)
T TIGR03411 159 MQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQV 229 (242)
T ss_pred hcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHH
Confidence 9999999999999999999999999999987678999999999999975 899999999999999987653
No 188
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=6.8e-39 Score=360.38 Aligned_cols=211 Identities=25% Similarity=0.392 Sum_probs=175.7
Q ss_pred EEEEEEEEEeCCCC--CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCCh---Hhhh
Q 000522 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLR 1297 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR 1297 (1445)
|+++||+++|+... +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 369999999999999999999999999999999999999999999999999988774 5778
Q ss_pred cceEEEcCCC--ccc-CccHHHhcCCC----CCCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHH
Q 000522 1298 GRFAVVPQSP--FLF-EGSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLA 1369 (1445)
Q Consensus 1298 ~~i~~VpQdp--~lF-~gTIReNLdp~----~~~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LA 1369 (1445)
++++|+||+| .++ ..|+++|+... ....+++..+ .+ ..+.++.+|++ ........+||+|||||++||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~---~~-~~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~la 157 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARK---EA-VLLLLVGVGLPEEVLNRYPHELSGGQRQRVAIA 157 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHH---HH-HHHHHHHCCCChhHhhCCchhcCHHHHHHHHHH
Confidence 8999999999 344 46999998532 1111111111 00 12344445774 456677778999999999999
Q ss_pred HHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHh-hcCEEEEEeCCeEeeec
Q 000522 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G 1437 (1445)
||++.+|+||||||||++||+++.+.+.+.|++..+ ++|||++||+++.+. .||+|++|++|++++.|
T Consensus 158 ral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 158 RALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999988753 799999999999988 58999999999998865
No 189
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3.9e-39 Score=363.21 Aligned_cols=213 Identities=25% Similarity=0.379 Sum_probs=181.4
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhh-hcceE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1301 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1301 (1445)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 478999999963 369999999999999999999999999999999999999999999999999988776554 56899
Q ss_pred EEcCCCcccCc-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1302 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1302 ~VpQdp~lF~g-TIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
|+||++.+|++ |+++|+..... ...++.. ..+.+.++.+|++........+||+|||||++||||++.+|+
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 153 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEFHITHLRKSKASSLSGGERRRVEIARALATNPK 153 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999987 99999964321 1111111 123344555577766777778899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1378 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|||||||++||.++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|++++.
T Consensus 154 llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 220 (232)
T cd03218 154 FLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEI 220 (232)
T ss_pred EEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHh
Confidence 999999999999999999999998764 47899999999987765 899999999999999987653
No 190
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-39 Score=368.96 Aligned_cols=211 Identities=22% Similarity=0.340 Sum_probs=182.6
Q ss_pred cEEEEEEEEEeCCC-CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1222 LIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
.++++||+++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743 34699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEcCCC--cccCccHHHhcCCCC---CCChHHH----HHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000522 1301 AVVPQSP--FLFEGSLRDNLDPFH---MNDDLKI----WSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1301 ~~VpQdp--~lF~gTIReNLdp~~---~~sd~ei----~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1445)
+|+||+| .++..|+.+||.+.. ..+++++ .++++.+ |++.........||||||||++||||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~lAra 154 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAV---------NMLDFKTREPARLSGGQKQRVAVAGI 154 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHC---------CCHhHhhCCcccCCHHHHHHHHHHHH
Confidence 9999998 467789999997431 1233332 3344444 44444455566899999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++++.|+|++
T Consensus 155 L~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~ 226 (277)
T PRK13642 155 IALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSE 226 (277)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999987643 799999999999998899999999999999999865
No 191
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-39 Score=365.74 Aligned_cols=213 Identities=27% Similarity=0.385 Sum_probs=181.1
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCCCCChHhh
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTPVRDL 1296 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i~~~~l 1296 (1445)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999964 3699999999999999999999999999999999999974 69999999999998888889
Q ss_pred hcceEEEcCCCccc-CccHHHhcCCCCC-----CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1297 RGRFAVVPQSPFLF-EGSLRDNLDPFHM-----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1297 R~~i~~VpQdp~lF-~gTIReNLdp~~~-----~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
|++++|+||+|.+| ..|+++|+.+... .. ++++.++++.+++.+.+ +........+||||||||+
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgG~~qrv 155 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEV-----KDRLDAPAGKLSGGQQQRL 155 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcch-----hhhhcCCcccCCHHHHHHH
Confidence 99999999999755 5799999964211 01 23345555555543221 1233445568999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+||||++++|+||+|||||++||+.+.+.+.+.|++..+++|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 156 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (250)
T PRK14247 156 CIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTRE 231 (250)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHH
Confidence 999999999999999999999999999999999998767899999999999986 589999999999999998864
No 192
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=3.6e-39 Score=380.33 Aligned_cols=201 Identities=26% Similarity=0.345 Sum_probs=172.5
Q ss_pred CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhh----hcceEEEcCCCcccCc
Q 000522 1237 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGRFAVVPQSPFLFEG 1312 (1445)
Q Consensus 1237 ~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l----R~~i~~VpQdp~lF~g 1312 (1445)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.|+...+...+ |++++||||++.+|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 469999999999999999999999999999999999999999999999999999998888 7899999999999985
Q ss_pred -cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCC
Q 000522 1313 -SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANV 1388 (1445)
Q Consensus 1313 -TIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~l 1388 (1445)
||++|+.+... .+.++..+ ...+.++.+||+...+....+||||||||++|||||+++|+|||||||||+|
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~vgL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~saL 160 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKE-----KALELLKLVGLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFSAL 160 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhcCCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 99999964321 22222211 1122333336666667777789999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhC--CCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCCC
Q 000522 1389 DAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1389 D~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|+.+.+.+++.+++.. .++|+|+|||+++.+. -||||++|++|++++.|+|++.
T Consensus 161 D~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei 217 (363)
T TIGR01186 161 DPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEI 217 (363)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 9999999999998763 3899999999999865 5899999999999999998764
No 193
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=7.6e-39 Score=354.55 Aligned_cols=202 Identities=27% Similarity=0.398 Sum_probs=174.8
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++... ..+|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 478999999953 4799999999999999999999999999999999999999999999999998764 567889999
Q ss_pred EcCCCcccC-ccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1303 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1303 VpQdp~lF~-gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
+||++.+|. .|++||+.++. ..+++++.++++..++.+. .......||+|||||++||||++++|++
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~---------~~~~~~~LS~G~~qrv~la~al~~~p~l 147 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDS---------AKKKVKGFSLGMKQRLGIALALLGNPDL 147 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHH---------HhhhHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998885 69999996532 1234556666666655443 3444557999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeec
Q 000522 1379 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G 1437 (1445)
|+|||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 148 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 148 LILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999998754 47999999999999875 8999999999999875
No 194
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-39 Score=367.67 Aligned_cols=216 Identities=26% Similarity=0.387 Sum_probs=182.8
Q ss_pred CCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--C
Q 000522 1219 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--T 1291 (1445)
Q Consensus 1219 ~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i 1291 (1445)
+.+.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3568999999999964 4699999999999999999999999999999999999975 89999999999975 3
Q ss_pred ChHhhhcceEEEcCCCcccCccHHHhcCCCCC---C--C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhH
Q 000522 1292 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N--D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQ 1362 (1445)
Q Consensus 1292 ~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~---~--s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQ 1362 (1445)
+...+|++++|+||+|.+|++|+++|+.+... . + ++++.++++.+++.+.+ ....+..+.+|||||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq 168 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEV-----KDRLHEPGTGLSGGQ 168 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhh-----hHHhhCCcccCCHHH
Confidence 45678899999999999999999999964211 1 1 22344455555443321 123455667899999
Q ss_pred HHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|||++|||||+.+|++|||||||++||+.+.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|++++
T Consensus 169 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 248 (267)
T PRK14235 169 QQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEK 248 (267)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999865 79999999999999998764
No 195
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=376.83 Aligned_cols=212 Identities=24% Similarity=0.355 Sum_probs=179.1
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+...+. .|++++
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 3899999999964 469999999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEcCCCcccCc-cHHHhcCCCCC-------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000522 1302 VVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1445)
Q Consensus 1302 ~VpQdp~lF~g-TIReNLdp~~~-------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1445)
||||++.+|+. |++||+.+... .+.++..+ ...+.++.+|++.........||||||||++|||||+
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~L~~~~~~~~~~LSgGq~QRvalArAL~ 152 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKA-----KVTQLLEMVQLAHLADRYPAQLSGGQKQRVALARALA 152 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHH-----HHHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHh
Confidence 99999999985 99999975421 12222111 1122333335555555566789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1374 KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++|++|+||||||+||..+.+.+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|+|++.|+|++.
T Consensus 153 ~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i 224 (353)
T PRK10851 153 VEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQV 224 (353)
T ss_pred cCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999999987653 7899999999998765 899999999999999998753
No 196
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.4e-38 Score=363.30 Aligned_cols=205 Identities=27% Similarity=0.398 Sum_probs=183.2
Q ss_pred CccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcc
Q 000522 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGR 1299 (1445)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~ 1299 (1445)
.+.|+++|+++.. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+|| +
T Consensus 37 ~~~l~i~nls~~~----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLVG----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEec----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 4579999999852 4699999999999999999999999999999999999999999999998 3
Q ss_pred eEEEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1300 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1300 i~~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
++|+||++.+|++|+++|+.+.....+.++.++++.+++.+.+..+ +.++.+++.+.+||+|||||++||||++++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999865444445667778888888887776 77888888888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHH-HHHhCCCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1378 VLCLDECTANVDAQTASILQNA-ISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~~-I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||||||||++||+++.+.+.+. +++..+++|||+|||+++.+..||+|++|++|++++.|++++
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~ 244 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSE 244 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999888765 455556899999999999999999999999999999998764
No 197
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-39 Score=366.86 Aligned_cols=215 Identities=24% Similarity=0.361 Sum_probs=183.4
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CCh
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPV 1293 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~ 1293 (1445)
..|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 46999999999953 479999999999999999999999999999999999997 579999999999864 345
Q ss_pred HhhhcceEEEcCCCcccCccHHHhcCCCC----CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000522 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1445)
Q Consensus 1294 ~~lR~~i~~VpQdp~lF~gTIReNLdp~~----~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1365 (1445)
..+|+.++|+||++.+|.+|+++|+.... ..+ ++++.++++.+++.+.+ +...+.....||+|||||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-----~~~~~~~~~~LS~G~~qr 171 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-----KDDLHKSALTLSGGQQQR 171 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-----hhhhcCCcccCCHHHHHH
Confidence 67789999999999999999999996531 111 22344455555543322 234566677899999999
Q ss_pred HHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++||||++++|++|||||||++||+.+.+.+.+.|++..++.|+|+|||+++.+.. ||+|++|++|++++.|++++.
T Consensus 172 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14237 172 LCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNI 249 (267)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999988778999999999998865 899999999999999998653
No 198
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.2e-39 Score=357.86 Aligned_cols=208 Identities=26% Similarity=0.362 Sum_probs=176.7
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEEE
Confidence 578999999964 4699999999999999999999999999999999999999999999999998763 3567889999
Q ss_pred EcCCCcccCc-cHHHhcCCCC---CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000522 1303 VPQSPFLFEG-SLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1445)
Q Consensus 1303 VpQdp~lF~g-TIReNLdp~~---~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1445)
+||++.+|++ |+++|+.... ..+ ++++.++++..+ ++.........||||||||++||||++.
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~---------l~~~~~~~~~~LS~G~~qr~~la~al~~ 148 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVG---------LLEAADRLVKTYSGGMRRRLEIARSLVH 148 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC---------CHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 9999998875 9999996421 111 223444444444 4433444455799999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhC-C-CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1375 SSKVLCLDECTANVDAQTASILQNAISSEC-K-GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~-~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|++|||||||++||+++.+.+.+.|++.. + ++|||+|+|+++.+.. ||+|++|++|++++.|+|++.
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 149 RPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999998764 2 7899999999999876 899999999999999988764
No 199
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-38 Score=368.99 Aligned_cols=212 Identities=28% Similarity=0.443 Sum_probs=183.8
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCC---cEEEECCeeCCCCChHhhh
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG---GQILVDGLNIINTPVRDLR 1297 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~---G~I~IDG~di~~i~~~~lR 1297 (1445)
+.|+++|++++|++...++|+|+||+|++||++||+|+||||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999997544469999999999999999999999999999999999999987 8999999999888877889
Q ss_pred cceEEEcCCC--cccCccHHHhcCCCC---CCChHH----HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000522 1298 GRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1368 (1445)
Q Consensus 1298 ~~i~~VpQdp--~lF~gTIReNLdp~~---~~sd~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1368 (1445)
++++|+||+| .+++.|++||+.+.. ..++++ +.++++.+ |++...+....+||+|||||++|
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~---------~L~~~~~~~~~~LS~G~~qrv~l 154 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADV---------GMLDYIDSEPANLSGGQKQRVAI 154 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHC---------CChhHhcCCcccCCHHHHHHHHH
Confidence 9999999998 466789999997531 123322 33334443 55555566667899999999999
Q ss_pred HHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||||+++|++|||||||++||..+.+.+.+.|++..+ ++|||++||+++.+..||+|++|++|++++.|+|++
T Consensus 155 aral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~ 229 (282)
T PRK13640 155 AGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVE 229 (282)
T ss_pred HHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999987653 789999999999998899999999999999998864
No 200
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=8.3e-39 Score=355.69 Aligned_cols=206 Identities=27% Similarity=0.417 Sum_probs=173.6
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++|
T Consensus 1 i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGN--VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECC--eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 578999999964 3699999999999999999999999999999999999999999999999999766543 568999
Q ss_pred EcCCCcccC-ccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1303 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1303 VpQdp~lF~-gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
+||++.+|. .|+++|+.... ....++..+ .+.+.++.+|++.........||+|||||++||||++++|+|
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 151 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAELLQIEHLLDRKPKQLSGGQRQRVALGRAIVREPKV 151 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999886 59999996531 112222111 112233344666556666678999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeec
Q 000522 1379 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G 1437 (1445)
++|||||++||+++.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|++|++++.|
T Consensus 152 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 152 FLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999998764 37999999999999876 8999999999999886
No 201
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.3e-38 Score=360.59 Aligned_cols=212 Identities=27% Similarity=0.432 Sum_probs=180.8
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCC--ChHhhhcce
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT--PVRDLRGRF 1300 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i--~~~~lR~~i 1300 (1445)
++++|++++|++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999963 4699999999999999999999999999999999999999999999999999764 345678899
Q ss_pred EEEcCCCcccC-ccHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000522 1301 AVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1445)
Q Consensus 1301 ~~VpQdp~lF~-gTIReNLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1445)
+|+||++.+|. .|+++|+.+.. ..+.++.++ ...+.++.+|++.........||+|||||++||||++++
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 154 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVK 154 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHcCChHHHhcChhhcCHHHHHHHHHHHHHhcC
Confidence 99999999886 59999996431 112222111 123445555777667777778999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1376 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|+|++|||||++||.++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|++.+
T Consensus 155 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 222 (240)
T PRK09493 155 PKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQV 222 (240)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHH
Confidence 99999999999999999999999998764 47999999999999865 89999999999999998754
No 202
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-39 Score=357.98 Aligned_cols=207 Identities=30% Similarity=0.354 Sum_probs=172.2
Q ss_pred EEEEEEEEEeCCCC--CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
++++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999996421 469999999999999999999999999999999999999999999999999863 46789
Q ss_pred EEEcCCCcccC-ccHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1301 AVVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1301 ~~VpQdp~lF~-gTIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
+|+||+|.+|+ .|+++|+.+... ...++.. ....+.++.+|++........+||||||||++||||++++|
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrl~la~al~~~p 150 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEAR-----ERAEELLELVGLSGFENAYPHQLSGGMRQRVALARALAVDP 150 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHcCChhhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999987 699999864211 1111110 11223334445555555566689999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEe--CCeEeeecCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILD--HGHLPHCGCA 1439 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~--~G~vvE~G~p 1439 (1445)
++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.+ ||+|++|+ +|+++|.++.
T Consensus 151 ~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 151 DVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999998763 37899999999998765 89999999 7999998764
No 203
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=366.39 Aligned_cols=216 Identities=24% Similarity=0.381 Sum_probs=182.5
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++|++++|+...+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 58999999999754456999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcCCCc-cc-CccHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1302 VVPQSPF-LF-EGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1302 ~VpQdp~-lF-~gTIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
|+||+|. +| ..|+++|+..... ...++..+ .+.+.++.+|++........+||+|||||++||||++++|
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 161 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHR-----RVSEALKQVDMLERADYEPNALSGGQKQRVAIAGVLALNP 161 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHcCCchhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 9999994 44 5589999864321 12222111 1122333335554455566789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||||++|++|++++.|+|++.
T Consensus 162 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 229 (269)
T PRK13648 162 SVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEI 229 (269)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999988643 7899999999999988999999999999999998753
No 204
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.2e-39 Score=361.02 Aligned_cols=210 Identities=25% Similarity=0.396 Sum_probs=178.2
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHh-hhcceE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRFA 1301 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i~ 1301 (1445)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQ--SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCC--eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 478999999974 36999999999999999999999999999999999999999999999999998877654 467899
Q ss_pred EEcCCCcccCc-cHHHhcCCCC-CC--ChHH-HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1302 VVPQSPFLFEG-SLRDNLDPFH-MN--DDLK-IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1302 ~VpQdp~lF~g-TIReNLdp~~-~~--sd~e-i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
|+||++.+|++ |+++|+.... .. .+++ ..++++..+ +++........+||||||||++||||++++|
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~--------~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP--------VLKEMLGRRGGDLSGGQQQQLAIARALVTRP 150 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH--------hHHHHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999986 9999996431 11 1111 122222221 2344455566689999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+++||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|++++.
T Consensus 151 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 151 KLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999987653 7999999999999986 899999999999999998765
No 205
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-39 Score=369.69 Aligned_cols=214 Identities=29% Similarity=0.425 Sum_probs=180.5
Q ss_pred EEEEEEEEEeCCCC---CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCC----ChHh
Q 000522 1223 IEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRD 1295 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~~ 1295 (1445)
++++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997432 3699999999999999999999999999999999999999999999999998764 3567
Q ss_pred hhcceEEEcCCC--cccCccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHHH
Q 000522 1296 LRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICLA 1369 (1445)
Q Consensus 1296 lR~~i~~VpQdp--~lF~gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LA 1369 (1445)
+|++|+|+||+| .+|+.|+++|+.+.. ..++++..+. ..+.++.+|++. ........||||||||++||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~la 157 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALVGISESLFEKNPFELSGGQMRRVAIA 157 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCChhhhhCCcccCCHHHHHHHHHH
Confidence 889999999998 678899999996421 1223322211 223344446753 45666778999999999999
Q ss_pred HHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||++++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+|++
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (280)
T PRK13649 158 GILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKD 231 (280)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999998764 47899999999998865 89999999999999998765
No 206
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=8.8e-39 Score=355.84 Aligned_cols=201 Identities=30% Similarity=0.387 Sum_probs=171.1
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCCh---Hhhhcc
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV---RDLRGR 1299 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~---~~lR~~ 1299 (1445)
++++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 4789999999643 469999999999999999999999999999999999999999999999999987754 357889
Q ss_pred eEEEcCCCcccCc-cHHHhcCCCC---CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000522 1300 FAVVPQSPFLFEG-SLRDNLDPFH---MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1300 i~~VpQdp~lF~g-TIReNLdp~~---~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1445)
++++||+|.+|++ |+++|+.... ..+. +++.++++.+ |++........+||+|||||++||||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~lara 150 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELV---------GLSHKHRALPAELSGGEQQRVAIARA 150 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc---------CCHHHhhCChhhcCHHHHHHHHHHHH
Confidence 9999999999985 9999996431 1121 2233444444 55444445556899999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeE
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1433 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~v 1433 (1445)
++++|+|+||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|++
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 151 IVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999998763 58999999999999986 899999999975
No 207
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-39 Score=365.71 Aligned_cols=213 Identities=28% Similarity=0.390 Sum_probs=178.9
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1294 (1445)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 4899999999964 469999999999999999999999999999999999997 479999999999864 3455
Q ss_pred hhhcceEEEcCCCcccCccHHHhcCCCCC---CCh-----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---NDD-----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~gTIReNLdp~~~---~sd-----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
.+|+.++|+||++.+|++|+++|+.+... ..+ +++.++++.++++... ....+....+||+|||||+
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~Gq~qr~ 156 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-----KDNLDRNAQAFSGGQQQRI 156 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-----HHHhccChhhCCHHHHHHH
Confidence 67889999999999999999999975311 111 2233444444432110 1223455668999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+||||++++|+++||||||++||+++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 157 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14251 157 CIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEE 232 (251)
T ss_pred HHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999987678999999999999876 89999999999999998754
No 208
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-38 Score=370.83 Aligned_cols=217 Identities=24% Similarity=0.349 Sum_probs=180.7
Q ss_pred CccEEEEEEEEEeCCCC---CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCC----C-
Q 000522 1220 QGLIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN----T- 1291 (1445)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~----i- 1291 (1445)
.|.|+++|++++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 46799999999996432 259999999999999999999999999999999999999999999999999853 2
Q ss_pred ChHhhhcceEEEcCCC--cccCccHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHH
Q 000522 1292 PVRDLRGRFAVVPQSP--FLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQL 1365 (1445)
Q Consensus 1292 ~~~~lR~~i~~VpQdp--~lF~gTIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQr 1365 (1445)
+...+|++++|+||+| .+|..|+++|+.+... ...++..+. +.+.++.+|++ ...+.....||+|||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~ll~~~~L~~~~~~~~~~~LS~Gq~qr 158 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK-----VPELLKLVQLPEDYVKRSPFELSGGQKRR 158 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCChhHhcCChhhCCHHHHHH
Confidence 4567888999999998 4678899999964321 222222211 12333344663 34566677899999999
Q ss_pred HHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
++|||||+++|++|||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 159 v~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 237 (289)
T PRK13645 159 VALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFE 237 (289)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999998764 37999999999998764 89999999999999998764
No 209
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.6e-38 Score=341.01 Aligned_cols=172 Identities=35% Similarity=0.591 Sum_probs=162.8
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+++|++++|+....++++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+.+.+|++++|
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999997544569999999999999999999999999999999999999999999999999999998899999999
Q ss_pred EcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000522 1303 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1445)
Q Consensus 1303 VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1445)
++|+|.+|++|+++|+ ||+|||||++||||++++|++||||
T Consensus 81 ~~q~~~~~~~tv~~~l---------------------------------------LS~G~~qrv~la~al~~~p~~lllD 121 (173)
T cd03246 81 LPQDDELFSGSIAENI---------------------------------------LSGGQRQRLGLARALYGNPRILVLD 121 (173)
T ss_pred ECCCCccccCcHHHHC---------------------------------------cCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999998 9999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhhcCEEEEEeCCeE
Q 000522 1383 ECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHL 1433 (1445)
Q Consensus 1383 EaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~v 1433 (1445)
|||++||+.+.+.+.+.|++.. +++|+|+++|+++.+..||+|++|++|++
T Consensus 122 EPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 122 EPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred CCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 9999999999999999998764 48899999999999988999999999975
No 210
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=8.4e-39 Score=352.40 Aligned_cols=201 Identities=25% Similarity=0.398 Sum_probs=171.4
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|++|+|.. +++|+|+||++++|++++|+||||||||||||+|.|.++|.+|+|.++|
T Consensus 2 ~L~~~~ls~~y~~------~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelA 75 (258)
T COG1120 2 MLEVENLSFGYGG------KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELA 75 (258)
T ss_pred eeEEEEEEEEECC------eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHh
Confidence 3678999999963 3459999999999999999999999999999999999999999999998
Q ss_pred -eEEEEcCCCCCCCc-cHHHHHhcCCC-C----------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000522 673 -SIAYVPQVPWILSG-TIRDNILFGKN-Y----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1445)
Q Consensus 673 -~i~y~~Q~p~l~~~-ti~~nI~~g~~-~----------~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQk 739 (1445)
.+||+||++....+ ||+|-+.+|+- + |++...++++.+++.+-. ...-..||||||
T Consensus 76 k~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la-----------~r~~~~LSGGer 144 (258)
T COG1120 76 KKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLA-----------DRPVDELSGGER 144 (258)
T ss_pred hhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHh-----------cCcccccChhHH
Confidence 69999999876544 99999999852 1 233455667777776432 234568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchh-hhhCCEEEEEeCCEEEEecCHh
Q 000522 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSA 818 (1445)
Q Consensus 740 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~-l~~~d~i~~l~~G~i~~~g~~~ 818 (1445)
|||.|||||+++|+|++||||||+||....-.+++.+..-...+|+|+|+|+|+++. +.+||++++|++|+++.+|+++
T Consensus 145 Qrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~ 224 (258)
T COG1120 145 QRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPE 224 (258)
T ss_pred HHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcc
Confidence 999999999999999999999999999999999987433223457899999999987 4569999999999999999998
Q ss_pred HHHh
Q 000522 819 DLAV 822 (1445)
Q Consensus 819 ~~~~ 822 (1445)
|++.
T Consensus 225 evlT 228 (258)
T COG1120 225 EVLT 228 (258)
T ss_pred hhcC
Confidence 8764
No 211
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.6e-38 Score=361.66 Aligned_cols=216 Identities=22% Similarity=0.335 Sum_probs=181.4
Q ss_pred CccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCC-------
Q 000522 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP------- 1292 (1445)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~------- 1292 (1445)
++.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++....
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 467999999999964 46999999999999999999999999999999999999999999999999986421
Q ss_pred ------hHhhhcceEEEcCCCcccCc-cHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCchhh-hcCCCCCCh
Q 000522 1293 ------VRDLRGRFAVVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFV-KESGISFSV 1360 (1445)
Q Consensus 1293 ------~~~lR~~i~~VpQdp~lF~g-TIReNLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLdt~v-~e~G~~LSg 1360 (1445)
...+|++++|+||++.+|++ |++||+.... ...+.+.. ..+.+.++.+|++... +.....||+
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~~LS~ 155 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEAR-----ERAVKYLAKVGIDERAQGKYPVHLSG 155 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHH-----HHHHHHHHHcCCChhhhhCCcccCCH
Confidence 34678899999999999985 9999996421 11111111 1123344445665543 556678999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecC
Q 000522 1361 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGC 1438 (1445)
Q Consensus 1361 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~ 1438 (1445)
|||||++|||||+++|+++||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||||++|++|++++.|+
T Consensus 156 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 235 (257)
T PRK10619 156 GQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGA 235 (257)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998764 48999999999999986 89999999999999998
Q ss_pred CCCC
Q 000522 1439 AAAP 1442 (1445)
Q Consensus 1439 p~~~ 1442 (1445)
+++.
T Consensus 236 ~~~~ 239 (257)
T PRK10619 236 PEQL 239 (257)
T ss_pred HHHh
Confidence 7653
No 212
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-39 Score=364.43 Aligned_cols=214 Identities=28% Similarity=0.391 Sum_probs=179.5
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcC---CCC--CCcEEEECCeeCCCC--ChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL---TPI--CGGQILVDGLNIINT--PVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl---~~~--~~G~I~IDG~di~~i--~~~ 1294 (1445)
.++++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 5899999999964 4699999999999999999999999999999999997 454 589999999999764 346
Q ss_pred hhhcceEEEcCCCcccCccHHHhcCCCC---CC-C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~gTIReNLdp~~---~~-s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
.+|++++|+||+|.+|.+|+++|+.+.. .. . +++++++++.+++.+.+ +......+.+||||||||+
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv 155 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEV-----KDKLKESAFALSGGQQQRL 155 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcch-----hhhhhCCcccCCHHHHHHH
Confidence 7788999999999999999999996421 11 1 12334444444432211 2345566778999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+||||++++|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|+|++.
T Consensus 156 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 156 CIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999987778999999999999865 899999999999999988653
No 213
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=363.66 Aligned_cols=214 Identities=29% Similarity=0.427 Sum_probs=180.9
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CCh
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1293 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~ 1293 (1445)
|.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGD--FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECC--ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 57999999999964 3699999999999999999999999999999999999863 69999999999875 455
Q ss_pred HhhhcceEEEcCCCcccCccHHHhcCCCCC----CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000522 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1445)
Q Consensus 1294 ~~lR~~i~~VpQdp~lF~gTIReNLdp~~~----~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1365 (1445)
..+|++++|+||+|.+|+.|+++|+..... .+ ++++.++++.+++.+. +....+....+||+|||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDE-----VKDRLKKSALGLSGGQQQR 154 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchh-----hHHHHhcCCCCCCHHHHHH
Confidence 678999999999999999999999964321 11 2234444445444322 1233455667899999999
Q ss_pred HHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
++||||++.+|++|+|||||++||+.+.+.+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|++++
T Consensus 155 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 155 LCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999887668999999999998866 89999999999999998754
No 214
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2e-38 Score=361.53 Aligned_cols=213 Identities=26% Similarity=0.367 Sum_probs=180.4
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCC--------h
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--------V 1293 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~--------~ 1293 (1445)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG--QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 3899999999964 36999999999999999999999999999999999999999999999999987542 3
Q ss_pred HhhhcceEEEcCCCcccC-ccHHHhcCCC----CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000522 1294 RDLRGRFAVVPQSPFLFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1368 (1445)
Q Consensus 1294 ~~lR~~i~~VpQdp~lF~-gTIReNLdp~----~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1368 (1445)
..+|++++|+||+|.+|+ .|++||+... .....++..+ ...+.++.+|++........+||||||||++|
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~Gq~qrv~l 155 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA-----RARELLAKVGLAGKETSYPRRLSGGQQQRVAI 155 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCcchhhCChhhCChHHHHHHHH
Confidence 567889999999999886 5999999642 1112211111 12334455577666666777899999999999
Q ss_pred HHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|||++.+|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|++++.|++++
T Consensus 156 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 230 (250)
T PRK11264 156 ARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKA 230 (250)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999998764 48899999999999876 89999999999999998764
No 215
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1e-38 Score=321.43 Aligned_cols=205 Identities=24% Similarity=0.395 Sum_probs=177.5
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|.+++|.++|... + -..+++|++||+|||+||||||||||++++.||..|.+|+|.|+|+|....++. ++-+++
T Consensus 2 l~L~~V~~~y~~~-~---~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGHL-P---MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCcc-e---EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 5678999999642 2 367899999999999999999999999999999999999999999999888774 567999
Q ss_pred EcCCCcccCc-cHHHhcCCCC----CC---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000522 1303 VPQSPFLFEG-SLRDNLDPFH----MN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1445)
Q Consensus 1303 VpQdp~lF~g-TIReNLdp~~----~~---sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1445)
+.||.-||.- ||++|+..+- +. ..+.+..++.++|+.++.+.+ ...||||||||++|||+|+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RL---------P~~LSGGqRQRvALARclvR 146 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRL---------PGELSGGQRQRVALARCLVR 146 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhC---------ccccCchHHHHHHHHHHHhc
Confidence 9999999986 9999987542 22 335677888888887765543 44799999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1375 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+.+||+||||.|+||+.-.+.+...+.+.. ++.|+++|||.++.+.. +||++++++|||++.|+-++.
T Consensus 147 ~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~ 217 (231)
T COG3840 147 EQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQEL 217 (231)
T ss_pred cCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHH
Confidence 999999999999999999999988887654 58899999999998765 799999999999999986654
No 216
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=9.5e-39 Score=378.13 Aligned_cols=214 Identities=25% Similarity=0.383 Sum_probs=182.9
Q ss_pred CccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCC--cEEEECCeeCCCCChHhhh
Q 000522 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICG--GQILVDGLNIINTPVRDLR 1297 (1445)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~--G~I~IDG~di~~i~~~~lR 1297 (1445)
.|.|+++||+++|+. ..+|+|+||+|++||.++|+||||||||||+++|.|+++|++ |+|.+||.++.+.+.. +
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~--~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPH--K 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHH--H
Confidence 478999999999964 369999999999999999999999999999999999999999 9999999999877653 6
Q ss_pred cceEEEcCCCcccCc-cHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000522 1298 GRFAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1445)
Q Consensus 1298 ~~i~~VpQdp~lF~g-TIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1445)
+++++|+|++.+|+. |+++|+.+.- ..+++++.+. ..+.++.+||+........+||||||||++|||||+
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~-----v~~~l~~~gL~~~~~~~~~~LSgGq~QRvaLARAL~ 153 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAER-----VADALKLVGLGDAAAHLPAQLSGGMQQRIAIARAIA 153 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHhcCCCchhhCChhhCCHHHHHHHHHHHHHh
Confidence 789999999999987 9999997532 1233332221 223344446666666677789999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhCC---CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1374 KSSKVLCLDECTANVDAQTASILQNAISSECK---GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~---~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++|++|+||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||||+||++|++++.|+|++.
T Consensus 154 ~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~ 226 (362)
T TIGR03258 154 IEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQAL 226 (362)
T ss_pred cCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999999987543 7899999999998765 899999999999999998754
No 217
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.9e-38 Score=361.82 Aligned_cols=213 Identities=29% Similarity=0.449 Sum_probs=180.2
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCC----------
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP---------- 1292 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~---------- 1292 (1445)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 579999999964 46999999999999999999999999999999999999999999999999997653
Q ss_pred ---hHhhhcceEEEcCCCcccC-ccHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000522 1293 ---VRDLRGRFAVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1364 (1445)
Q Consensus 1293 ---~~~lR~~i~~VpQdp~lF~-gTIReNLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1364 (1445)
...+|++++++||++.+|. .|+++|+.... ....++..+ .+.+.++.+|++.........||+||||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~q 153 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEK-----RAMELLDMVGLADKADHMPAQLSGGQQQ 153 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCChhHhhcChhhcCHHHHH
Confidence 2467889999999999886 69999996421 112111111 1234444456666666777789999999
Q ss_pred HHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|++||||++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.+ ||++++|++|++++.|++++
T Consensus 154 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T TIGR03005 154 RVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDE 233 (252)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999987643 7899999999999865 89999999999999998765
Q ss_pred C
Q 000522 1442 P 1442 (1445)
Q Consensus 1442 ~ 1442 (1445)
.
T Consensus 234 ~ 234 (252)
T TIGR03005 234 I 234 (252)
T ss_pred H
Confidence 3
No 218
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-38 Score=365.75 Aligned_cols=213 Identities=27% Similarity=0.423 Sum_probs=180.6
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCC-hHhhhcceE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDLRGRFA 1301 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~~lR~~i~ 1301 (1445)
++++|++++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 7899999999633 46999999999999999999999999999999999999999999999999998765 467788999
Q ss_pred EEcCCCc--ccCccHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1302 VVPQSPF--LFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1302 ~VpQdp~--lF~gTIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
|+||+|. +++.|+++|+.+... .+.++..+. +.+.++.+|++.........||+|||||++||||++.+|
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~laral~~~p 155 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKR-----VDRALAEIGLEKYRHRSPKTLSGGQGQCVALAGILTMEP 155 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHCCCHHHhcCCcccCCHHHHHHHHHHHHHHcCC
Confidence 9999985 567899999975421 122221111 122333346655566667789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+||||||||++||+.+...+.+.+++.. +++|||++||+++.+..||+|++|++|++++.|++++
T Consensus 156 ~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~ 221 (274)
T PRK13644 156 ECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPEN 221 (274)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999998754 4899999999999998999999999999999998765
No 219
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-39 Score=365.41 Aligned_cols=215 Identities=24% Similarity=0.363 Sum_probs=180.5
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCCCC--Ch
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PV 1293 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~ 1293 (1445)
..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 11 ~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 11 PQIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eeEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 36999999999963 4699999999999999999999999999999999999985 799999999998653 34
Q ss_pred HhhhcceEEEcCCCcccCccHHHhcCCCC---CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1294 ~~lR~~i~~VpQdp~lF~gTIReNLdp~~---~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
..+|+.++|+||++.+|+.|+++|+.+.. ..+. +++.++++.+++.+.+ +.........||||||||+
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgG~~qrv 163 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-----SDRLKSPALSLSGGQQQRL 163 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-----hhhhcCChhhCCHHHHHHH
Confidence 56788999999999999999999996421 1222 2234455554442211 2334455668999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|||||+++|+||+|||||++||.++.+.+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|+|++.
T Consensus 164 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 164 CIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQI 240 (258)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999987668999999999999866 899999999999999998653
No 220
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=364.17 Aligned_cols=213 Identities=23% Similarity=0.371 Sum_probs=179.4
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--C---CCcEEEECCeeCCCC--ChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIINT--PVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~--~---~~G~I~IDG~di~~i--~~~ 1294 (1445)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++... +..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 5899999999964 369999999999999999999999999999999999954 6 499999999998653 345
Q ss_pred hhhcceEEEcCCCcccCccHHHhcCCC----CCCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPF----HMND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~gTIReNLdp~----~~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
.+|+.++|+||+|.+|+.|++||+.+. +... ++++.++++.+++.+.+ ....+....+||+|||||+
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv 157 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEV-----KDRLHDSALGLSGGQQQRV 157 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhH-----HHHHhcCcccCCHHHHHHH
Confidence 678899999999999999999998642 1111 22344455555443221 2345566678999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+||||++++|++|||||||++||.++.+.+.+.|++..+++|||+|||+++.+.. ||||++|++|++++.|++++
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T PRK14239 158 CIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQ 233 (252)
T ss_pred HHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999987667999999999998865 89999999999999998765
No 221
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-38 Score=358.25 Aligned_cols=204 Identities=27% Similarity=0.362 Sum_probs=175.6
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
-.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|+++
T Consensus 11 ~~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 11 TPLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred CcEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 35999999999964 46999999999999999999999999999999999999999999999998763 567899
Q ss_pred EEEcCCCcccC-ccHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1301 AVVPQSPFLFE-GSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1301 ~~VpQdp~lF~-gTIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
+|+||+|.+|+ .|++||+.+... ..++++.++++.. |++........+||||||||++|||||+++|++
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~---------gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~l 154 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAV---------GLADRANEWPAALSGGQKQRVALARALIHRPGL 154 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHc---------CChhHhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999987 599999975321 1233444444444 555555566678999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAA 1440 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~ 1440 (1445)
|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+..
T Consensus 155 llLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 155 LLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 99999999999999999999998763 37999999999998865 8999999999999988754
No 222
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=362.43 Aligned_cols=216 Identities=23% Similarity=0.370 Sum_probs=180.5
Q ss_pred CccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--C---CCcEEEECCeeCCCC--C
Q 000522 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIINT--P 1292 (1445)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~--~---~~G~I~IDG~di~~i--~ 1292 (1445)
+|.|+++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 467999999999963 469999999999999999999999999999999999986 4 689999999999754 3
Q ss_pred hHhhhcceEEEcCCCcccC-ccHHHhcCCC----CCCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHH
Q 000522 1293 VRDLRGRFAVVPQSPFLFE-GSLRDNLDPF----HMNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQR 1363 (1445)
Q Consensus 1293 ~~~lR~~i~~VpQdp~lF~-gTIReNLdp~----~~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQr 1363 (1445)
...+|++++|+||++.+|. .|+++|+... +..+. +++.++++.+++.+.+ +...+....+||+|||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~ 154 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEV-----KDRLKSNAMELSGGQQ 154 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hHHhhCCcCcCCHHHH
Confidence 4567899999999999998 5999999642 11121 2233444444433221 1234456678999999
Q ss_pred HHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1364 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1364 Qrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||++||||++++|++|||||||++||..+.+.+.+.|++..++.|||++||+++.+.. ||+|++|++|++++.|++++.
T Consensus 155 qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14256 155 QRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKI 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778899999999999865 899999999999999988653
No 223
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=366.03 Aligned_cols=213 Identities=27% Similarity=0.431 Sum_probs=179.1
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1294 (1445)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 6999999999963 469999999999999999999999999999999999875 689999999999865 3445
Q ss_pred hhhcceEEEcCCCcccCccHHHhcCCCC----CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFH----MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~gTIReNLdp~~----~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
.+|++++|+||++.+|++|+++|+.... ... ++.+.++++.+++.+. +....+....+||||||||+
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~~~~~~LSgGq~qrl 173 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDE-----VKDRLHSSALSLSGGQQQRL 173 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcc-----hHHHHhcCcccCCHHHHHHH
Confidence 6788999999999999999999986421 111 1233444444443211 12334566678999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+||||++++|+||||||||++||..+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|++++
T Consensus 174 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 249 (268)
T PRK14248 174 CIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQ 249 (268)
T ss_pred HHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999987667899999999998765 89999999999999998754
No 224
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-38 Score=358.36 Aligned_cols=213 Identities=24% Similarity=0.365 Sum_probs=180.8
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCC------CChHhh
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN------TPVRDL 1296 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~------i~~~~l 1296 (1445)
++++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+
T Consensus 3 l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (242)
T PRK11124 3 IQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIREL 80 (242)
T ss_pred EEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHH
Confidence 789999999964 469999999999999999999999999999999999999999999999998741 234567
Q ss_pred hcceEEEcCCCcccCc-cHHHhcCCC--C--CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000522 1297 RGRFAVVPQSPFLFEG-SLRDNLDPF--H--MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1297 R~~i~~VpQdp~lF~g-TIReNLdp~--~--~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1445)
|++++|+||+|.+|.+ |++||+..+ . ....++.. ..+.+.++.+|++...+....+||||||||++||||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~lara 155 (242)
T PRK11124 81 RRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERLRLKPYADRFPLHLSGGQQQRVAIARA 155 (242)
T ss_pred HhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHH
Confidence 8899999999999976 999999631 1 11222211 123344555577766777777899999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++++|+|+||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||+|++|++|++++.|++++.
T Consensus 156 l~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 156 LMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 999999999999999999999999999998764 48999999999999875 899999999999999987654
No 225
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.3e-39 Score=332.47 Aligned_cols=204 Identities=25% Similarity=0.342 Sum_probs=173.2
Q ss_pred CceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCC-----eEEEEcC-----
Q 000522 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH-----GSIHASG----- 672 (1445)
Q Consensus 603 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~-----G~i~~~~----- 672 (1445)
...++++|.++.|.. +.+|+|||++|+++++++++|||||||||||+++.+..+..+ |+|.++|
T Consensus 5 ~~~~~~~~l~~yYg~------~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~ 78 (253)
T COG1117 5 IPAIEVRDLNLYYGD------KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYD 78 (253)
T ss_pred cceeEecceeEEECc------hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccC
Confidence 356889999998863 335999999999999999999999999999999999887765 8998877
Q ss_pred ----------eEEEEcCCCCCCCccHHHHHhcCCCCC-------hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000522 673 ----------SIAYVPQVPWILSGTIRDNILFGKNYD-------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1445)
Q Consensus 673 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~~~-------~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LS 735 (1445)
+||+|+|.|.-|+.||+|||.+|.... ++..++.++.++|-+... ....+.+..||
T Consensus 79 ~~~d~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVK-------DrL~~sa~~LS 151 (253)
T COG1117 79 PKVDVVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVK-------DRLHKSALGLS 151 (253)
T ss_pred CCCCHHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhH-------HHhhCCccCCC
Confidence 599999999999999999999985422 234666677777765443 23467788999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEe
Q 000522 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1445)
Q Consensus 736 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1445)
|||+||++||||+.-+|+|+|||||||||||.+..+|-+. +.. +.++-|+|+|||+++...+ +|+...+-+|+++|.
T Consensus 152 GGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeL-i~e-Lk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~ 229 (253)
T COG1117 152 GGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEEL-ITE-LKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEF 229 (253)
T ss_pred hhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHH-HHH-HHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEE
Confidence 9999999999999999999999999999999988888775 433 4556699999999998766 999999999999999
Q ss_pred cCHhHHH
Q 000522 815 GSSADLA 821 (1445)
Q Consensus 815 g~~~~~~ 821 (1445)
|+.+++-
T Consensus 230 g~T~~iF 236 (253)
T COG1117 230 GPTDKIF 236 (253)
T ss_pred cCHHhhh
Confidence 9988874
No 226
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=9.6e-39 Score=374.95 Aligned_cols=215 Identities=24% Similarity=0.383 Sum_probs=179.5
Q ss_pred cEEEEEEEEEeCCC-----------CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCC
Q 000522 1222 LIEFQNVTMRYKPS-----------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN 1290 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~-----------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~ 1290 (1445)
.++++|++++|+.. ...+++|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 58999999999631 2469999999999999999999999999999999999999999999999999998
Q ss_pred CChHh---hhcceEEEcCCC--cccC-ccHHHhcCC----CC-CCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCC
Q 000522 1291 TPVRD---LRGRFAVVPQSP--FLFE-GSLRDNLDP----FH-MNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISF 1358 (1445)
Q Consensus 1291 i~~~~---lR~~i~~VpQdp--~lF~-gTIReNLdp----~~-~~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~L 1358 (1445)
++.+. +|++++||+|+| .+++ .||++|+.. +. ..+.++..+. ..+.++.+|++ .........|
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~-----~~~~l~~vgl~~~~~~~~p~~L 162 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDR-----VKAMMLKVGLLPNLINRYPHEF 162 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHcCCChHHhcCCcccC
Confidence 87554 678999999999 4774 699999852 11 1233332221 12333444663 2345666789
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEee
Q 000522 1359 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPH 1435 (1445)
Q Consensus 1359 SgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE 1435 (1445)
|||||||++|||||+.+|++||+||||++||..+.+.|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|
T Consensus 163 SgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive 242 (331)
T PRK15079 163 SGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVE 242 (331)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999987643 7899999999999986 89999999999999
Q ss_pred ecCCCC
Q 000522 1436 CGCAAA 1441 (1445)
Q Consensus 1436 ~G~p~~ 1441 (1445)
.|++++
T Consensus 243 ~g~~~~ 248 (331)
T PRK15079 243 LGTYDE 248 (331)
T ss_pred EcCHHH
Confidence 998754
No 227
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=359.73 Aligned_cols=213 Identities=26% Similarity=0.404 Sum_probs=182.0
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHh-hhcce
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1300 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1300 (1445)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 3889999999964 46999999999999999999999999999999999999999999999999998877644 57889
Q ss_pred EEEcCCCcccCc-cHHHhcCCCCCC----ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFHMN----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~~~----sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1445)
+++||++.+|.+ |++||+...... +.++. +....+.++.+|++.........||+|||||++||||++++
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAAN 155 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHcCCHHHhhcchhhCCHHHHHHHHHHHHHhcC
Confidence 999999998885 999999754211 11111 11233455555777766777778999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1376 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|++|||||||++||+.+.+.+.+.+++.. +++|+|++||+++.+.. ||+|++|++|++++.|+|++
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 223 (241)
T PRK10895 156 PKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTE 223 (241)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHH
Confidence 99999999999999999999999887753 48999999999987755 89999999999999998864
No 228
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-39 Score=364.68 Aligned_cols=212 Identities=25% Similarity=0.381 Sum_probs=177.9
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEECCeeCCCCC--hHh
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINTP--VRD 1295 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~i~--~~~ 1295 (1445)
-+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999963 469999999999999999999999999999999999986 47999999999987653 346
Q ss_pred hhcceEEEcCCCcccCccHHHhcCCCC---CC------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1296 LRGRFAVVPQSPFLFEGSLRDNLDPFH---MN------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1296 lR~~i~~VpQdp~lF~gTIReNLdp~~---~~------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
+|++++|+||++.+|++|+++|+.+.. .. .++++.++++..++.+.+ .+.++..+.+||+|||||+
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~Gq~qrv 158 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEEL-----GDRLKDSAFELSGGQQQRL 158 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchh-----hhHhhcChhhCCHHHHHHH
Confidence 788999999999999999999986431 11 112333444444432211 1244556678999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+||||++++|+||||||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 159 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (251)
T PRK14244 159 CIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQE 234 (251)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999987678999999999999875 89999999999999998764
No 229
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2e-38 Score=378.36 Aligned_cols=209 Identities=27% Similarity=0.406 Sum_probs=183.6
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++|++++|+. .++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.+++...+|++++
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999964 47999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCcc-cCccHHHhcCCCCC-----C------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000522 1302 VVPQSPFL-FEGSLRDNLDPFHM-----N------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1369 (1445)
Q Consensus 1302 ~VpQdp~l-F~gTIReNLdp~~~-----~------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1369 (1445)
++||++.+ |+.|+++|+.+... . +++++.++++.+++.+. ......+||||||||++||
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~---------~~~~~~~LSgGerQRv~IA 151 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQF---------ADRPVTSLSGGERQRVLLA 151 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchh---------hcCChhhCCHHHHHHHHHH
Confidence 99999987 57799999965321 1 12345566666655443 3344557999999999999
Q ss_pred HHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCC
Q 000522 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|||+++|+||+|||||++||+.+...+.+.|++.. +++|||+++|+++.+. -||||++|++|++++.|+|++
T Consensus 152 rAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~e 225 (402)
T PRK09536 152 RALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPAD 225 (402)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 99999999999999999999999999999998764 4889999999999995 589999999999999999875
No 230
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-38 Score=365.43 Aligned_cols=211 Identities=27% Similarity=0.408 Sum_probs=181.1
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++|++++|+.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 3 ~l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 3 LIETRDLCYSYSGS-KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred eEEEEEEEEEeCCC-CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 37899999999633 35999999999999999999999999999999999999999999999999998878888899999
Q ss_pred EEcCCC--cccCccHHHhcCCCC---CCChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1302 VVPQSP--FLFEGSLRDNLDPFH---MNDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1302 ~VpQdp--~lF~gTIReNLdp~~---~~sd~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
|+||+| .+|+.|+++|+.... ..+.+ ++.++++.+ |+..........||+|||||++|||||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~Gq~qrl~laraL 152 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHML---------GLEELRDRVPHHLSGGEKKRVAIAGVI 152 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHC---------CChhHhcCCcccCCHHHHHHHHHHHHH
Confidence 999998 477889999996422 12222 233444444 444444555668999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCCC
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+.+|++|||||||++||+.+.+.+.+.+++..+ ++|||++||+++.+. .||||++|++|++++.|+|++.
T Consensus 153 ~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~ 225 (277)
T PRK13652 153 AMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEI 225 (277)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999999987643 799999999999985 5899999999999999998764
No 231
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=361.97 Aligned_cols=214 Identities=28% Similarity=0.392 Sum_probs=181.5
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCCCC--ChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1294 (1445)
.++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 5899999999964 4699999999999999999999999999999999999975 799999999999754 345
Q ss_pred hhhcceEEEcCCCcccCccHHHhcCCCCC---C-C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N-D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~gTIReNLdp~~~---~-s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
.+|++++|+||++.+|+.|+++|+.+... . + ++++.++++.+++.+.+ ....+.....||+|||||+
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv 156 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEV-----KDDLKKSALKLSGGQQQRL 156 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhh-----hhHhhCCcccCCHHHHHHH
Confidence 67889999999999999999999974321 1 1 12344555555543221 2234556678999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+||||++++|+||||||||++||+.+.+.+.+.|++..++.|+|+|||+++.+.. ||||++|++|++++.|++++.
T Consensus 157 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 157 CIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999987767999999999999876 899999999999999987653
No 232
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=8.1e-39 Score=367.54 Aligned_cols=209 Identities=26% Similarity=0.379 Sum_probs=184.0
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
..|+++||+.+|+ ...+++|+||+|++||.+.+.|||||||||++++|.||..|++|+|.+||.|+.++|++ ++.|
T Consensus 4 ~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 4699999999998 45799999999999999999999999999999999999999999999999999999986 6799
Q ss_pred EEEcCCCcccCc-cHHHhcCCCCC----CChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFHM----NDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~~----~sd~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1445)
++|+|+..||+- ||++|+.++-+ ..++ ++.++|+.++|.++ -......|||||+||++||||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~---------~~R~p~qLSGGQqQRVALARA 150 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGF---------ADRKPHQLSGGQQQRVALARA 150 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhh---------hhhChhhhChHHHHHHHHHHH
Confidence 999999999986 99999987533 2333 45666666665543 344566899999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCCC
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|..+|++|+||||-|+||.+-...+|.-+++.. .|.|.|.|||+-+... -+|||+||++|+|...|+|+|.
T Consensus 151 L~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~ei 224 (352)
T COG3842 151 LVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEI 224 (352)
T ss_pred hhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHH
Confidence 999999999999999999999999988887653 3899999999988655 5799999999999999999875
No 233
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-38 Score=363.66 Aligned_cols=216 Identities=24% Similarity=0.346 Sum_probs=182.2
Q ss_pred CccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CC
Q 000522 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TP 1292 (1445)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~ 1292 (1445)
.-.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 22 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 22 KVVFDTQNLNLWYGE--DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred ceEEEEeeeEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 346999999999964 369999999999999999999999999999999999997 699999999999853 45
Q ss_pred hHhhhcceEEEcCCCcccCccHHHhcCCCC---CCChH-----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000522 1293 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDDL-----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1364 (1445)
Q Consensus 1293 ~~~lR~~i~~VpQdp~lF~gTIReNLdp~~---~~sd~-----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1364 (1445)
...+|++++|+||+|.+|.+|+++|+.+.. ..+++ .+.++++..++.+ ++....+..+..|||||||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~l~~~~~~~~~~LSgGe~q 174 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWD-----ELKDRLHDNAYGLSGGQQQ 174 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-----hHHHHHhcCcccCCHHHHH
Confidence 567889999999999999999999997421 12221 2233344333321 2334456667789999999
Q ss_pred HHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|++++.
T Consensus 175 rv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 175 RLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999887778999999999999875 899999999999999988653
No 234
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=363.06 Aligned_cols=213 Identities=24% Similarity=0.374 Sum_probs=179.6
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--C---CCcEEEECCeeCCC--CChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIIN--TPVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~--~---~~G~I~IDG~di~~--i~~~ 1294 (1445)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQ--HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECC--eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 5899999999964 369999999999999999999999999999999999997 3 58999999999864 4556
Q ss_pred hhhcceEEEcCCCcccCccHHHhcCCCCC----CChHH----HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~gTIReNLdp~~~----~sd~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
.+|++++|+||+|.+|++|+++|+.+... .++++ +.++++..++.+.+ .........+||+|||||+
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~l~~~~~~LS~Gq~qrv 164 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEV-----KDRLHTQALSLSGGQQQRL 164 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hhhhhCCcccCCHHHHHHH
Confidence 78899999999999999999999964321 12222 33334444433221 2334566678999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+||||++++|+||+|||||++||.++...+.+.|++..+++|+|+|||+++.+.+ ||||++|++|++++.|+|++
T Consensus 165 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 240 (259)
T PRK14274 165 CIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNK 240 (259)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999999987678999999999999875 89999999999999999765
No 235
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-38 Score=358.36 Aligned_cols=214 Identities=24% Similarity=0.385 Sum_probs=178.4
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHh-hhcce
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1300 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1300 (1445)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 4899999999964 46999999999999999999999999999999999999999999999999998887654 67889
Q ss_pred EEEcCCCcccCc-cHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
+|+||++.+|++ |+++|+..... .+.++..+.+ .+.++.+ +++.........||+|||||++||||++++|+
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~ 157 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFPRLHERRIQRAGTMSGGEQQMLAIGRALMSQPR 157 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHHHHHHHHhCchhhCCHHHHHHHHHHHHHHhCCC
Confidence 999999999985 99999965321 1222222111 1222222 23333344556899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1378 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||||++|++|++++.|+|++.
T Consensus 158 illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 224 (237)
T PRK11614 158 LLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDAL 224 (237)
T ss_pred EEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHH
Confidence 999999999999999999999998764 48999999999997654 899999999999999998754
No 236
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-38 Score=364.26 Aligned_cols=217 Identities=27% Similarity=0.372 Sum_probs=183.8
Q ss_pred CCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--C
Q 000522 1219 FQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--T 1291 (1445)
Q Consensus 1219 ~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i 1291 (1445)
..+.++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.|+.. .
T Consensus 22 ~~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 22 EQTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CCcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 3457999999999964 3699999999999999999999999999999999999984 89999999999875 3
Q ss_pred ChHhhhcceEEEcCCCcccCccHHHhcCCCC---C-CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHH
Q 000522 1292 PVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---M-ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQR 1363 (1445)
Q Consensus 1292 ~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~---~-~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQr 1363 (1445)
+...+|++++|+||++.+|++|+++|+.+.. . .. ++++.++++.+++.+.+ .+..+..+.+||+|||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~Gq~ 174 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEV-----KDRLHENAFGLSGGQQ 174 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhH-----HHHhhCCcccCCHHHH
Confidence 4567899999999999999999999996431 1 11 12344555555543322 1345566778999999
Q ss_pred HHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1364 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1364 Qrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||++||||++++|+|+||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++.
T Consensus 175 qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 254 (272)
T PRK14236 175 QRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTL 254 (272)
T ss_pred HHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHH
Confidence 9999999999999999999999999999999999999987678999999999999865 899999999999999987653
No 237
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-38 Score=360.96 Aligned_cols=214 Identities=27% Similarity=0.383 Sum_probs=181.8
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC-----CcEEEECCeeCCCC--ChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIINT--PVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~i--~~~ 1294 (1445)
.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 5899999999963 46999999999999999999999999999999999999987 69999999998653 456
Q ss_pred hhhcceEEEcCCCcccCccHHHhcCCCCC----CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM----ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~gTIReNLdp~~~----~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
.+|++++|+||+|.+|++|++||+.+... .. ++.+.++++..++++.+ ....+..+.+||+|||||+
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LS~Gq~qrv 156 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEV-----KDNLHKSGLALSGGQQQRL 156 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhh-----hhHhhCCcccCCHHHHHHH
Confidence 78899999999999999999999975321 11 12233444445544322 2335566778999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+||||++++|++|||||||++||..+.+.+.+.|++..+++|||+|||+++.+.+ ||+|++|++|++++.|++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 157 CIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999887668999999999999887 699999999999999988653
No 238
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-38 Score=353.57 Aligned_cols=204 Identities=26% Similarity=0.418 Sum_probs=173.1
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++|++++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 478999999963 469999999999999999999999999999999999999999999999998753 56789999
Q ss_pred EcCCCcccCc-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1303 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1303 VpQdp~lF~g-TIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
+||++.+|++ |++||+..... .+..+.. ..+.+.++.+|++........+||+|||||++||||++++|++
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~~ 149 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEAR-----RRIDEWLERLELSEYANKRVEELSKGNQQKVQFIAAVIHDPEL 149 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHHH-----HHHHHHHHHcCChHHHhCcHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999986 99999864321 1111111 1223444455776666666778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeec
Q 000522 1379 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G 1437 (1445)
+||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|
T Consensus 150 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 150 LILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999998764 47899999999999875 8999999999999865
No 239
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=4.2e-38 Score=351.20 Aligned_cols=208 Identities=25% Similarity=0.380 Sum_probs=183.0
Q ss_pred EEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCCh----Hhhhcc
Q 000522 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV----RDLRGR 1299 (1445)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~----~~lR~~ 1299 (1445)
.+.|+.++|+++ .++++|+||+|++||.++|+|++|||||||+++|.|+++|++|+|.+||.++...+. ...|+.
T Consensus 2 ~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 80 (218)
T cd03290 2 QVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRYS 80 (218)
T ss_pred eeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcce
Confidence 578999999755 569999999999999999999999999999999999999999999999999876542 345678
Q ss_pred eEEEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhC--CCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1300 FAVVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1300 i~~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
++|+||+|.+|+.|+++|+......++++.+++++.+++.+.++.+ |+++.++....+||+|||||++||||++++|+
T Consensus 81 i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~ 160 (218)
T cd03290 81 VAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNTN 160 (218)
T ss_pred EEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 9999999999999999999875555566678888888888877765 78888888888999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHH--HHHHhC-CCcEEEEeccChhHHhhcCEEEEEeCCe
Q 000522 1378 VLCLDECTANVDAQTASILQN--AISSEC-KGMTVITIAHRISTVLNMDEILILDHGH 1432 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~--~I~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1432 (1445)
||||||||++||..+.+.+.+ .++... .+.|+|++||+++.+..||+|++|++|+
T Consensus 161 illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 161 IVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred EEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 999999999999999887776 444332 3789999999999999999999999984
No 240
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.9e-38 Score=375.26 Aligned_cols=213 Identities=25% Similarity=0.410 Sum_probs=180.5
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
..++++|++++|.. .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+.+ ++++
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 35999999999964 4699999999999999999999999999999999999999999999999999887764 5789
Q ss_pred EEEcCCCcccCc-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
++|+|++.+|+. |++||+.+.-. .++.++.+. +.+.++.+|++.........||||||||++|||||+++|
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P 163 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPR-----VMEALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKP 163 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHH-----HHHHHHHcCCchhhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999976 99999975321 222222111 122233335555556666789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++|+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+|++.
T Consensus 164 ~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i 232 (375)
T PRK09452 164 KVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREI 232 (375)
T ss_pred CEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 99999999999999999999999988653 7999999999998764 899999999999999998653
No 241
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=378.20 Aligned_cols=212 Identities=27% Similarity=0.377 Sum_probs=178.6
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++|++++|+. ..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 4899999999964 3699999999999999999999999999999999999999999999999999877653 57899
Q ss_pred EEcCCCcccCc-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1302 VVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1302 ~VpQdp~lF~g-TIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
||||++.+|+. |+++|+.+... .+.++..+ ...+.++.+|++........+||||||||++|||||+++|+
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~lgL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~ 153 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ-----RVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPS 153 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHcCChhhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99999999975 99999975321 22222111 12233333455555555666899999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1378 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|++.
T Consensus 154 lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i 221 (369)
T PRK11000 154 VFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLEL 221 (369)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 9999999999999999999999987643 7899999999998765 899999999999999998653
No 242
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-38 Score=363.84 Aligned_cols=209 Identities=26% Similarity=0.356 Sum_probs=180.4
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+.+.+...+|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5999999999963 36999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcCCCcccCc-cHHHhcCCCCC--------C---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000522 1302 VVPQSPFLFEG-SLRDNLDPFHM--------N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1369 (1445)
Q Consensus 1302 ~VpQdp~lF~g-TIReNLdp~~~--------~---sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1369 (1445)
|+||++.++.+ |+++|+..... . .++++.++++.+++. ........+||||||||++||
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~---------~~~~~~~~~LSgG~~qrv~la 159 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLK---------PLAHRLVDSLSGGERQRAWIA 159 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCH---------HHhcCCcccCCHHHHHHHHHH
Confidence 99999877665 99999964311 0 122345555555543 333444557999999999999
Q ss_pred HHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||++.+|+||||||||++||..+.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|++++.|++++
T Consensus 160 ral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~ 234 (265)
T PRK10575 160 MLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAE 234 (265)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHH
Confidence 99999999999999999999999999999998764 37999999999999864 89999999999999998765
No 243
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=5.9e-38 Score=350.99 Aligned_cols=206 Identities=27% Similarity=0.382 Sum_probs=172.3
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHh---hhcc
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---LRGR 1299 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---lR~~ 1299 (1445)
|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++... +|++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999532 46999999999999999999999999999999999999999999999999998876543 6889
Q ss_pred eEEEcCCCccc-CccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000522 1300 FAVVPQSPFLF-EGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1445)
Q Consensus 1300 i~~VpQdp~lF-~gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1445)
++|+||+|.+| ..|+++|+.... ..++++..+. ..+.++.+|++........+||+|||||++||||++++
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRR-----VSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNK 155 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHH-----HHHHHHHcCChhhhhCCchhCCHHHHHHHHHHHHHHcC
Confidence 99999999875 569999997531 1222222211 12223333555445556678999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEe
Q 000522 1376 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLP 1434 (1445)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vv 1434 (1445)
|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (222)
T PRK10908 156 PAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLH 216 (222)
T ss_pred CCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEc
Confidence 99999999999999999999999998763 47899999999999986 7999999999985
No 244
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-38 Score=349.83 Aligned_cols=200 Identities=24% Similarity=0.380 Sum_probs=170.5
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+++|++++|++. . .|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5789999999642 2 39999999999999999999999999999999999999999999999987654 4678999
Q ss_pred EcCCCcccCc-cHHHhcCCCCC-------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000522 1303 VPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1445)
Q Consensus 1303 VpQdp~lF~g-TIReNLdp~~~-------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1445)
+||+|.+|++ |++||+.+... .+++++.++++.++ ++........+||+|||||++||||+++
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~---------l~~~~~~~~~~LS~G~~qrv~ia~al~~ 145 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVG---------LAGLEKRLPGELSGGERQRVALARVLVR 145 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcC---------CHHHHhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999986 99999974321 11234445555554 4444444556899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeec
Q 000522 1375 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G 1437 (1445)
+|++|||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 146 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 146 DKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999998764 37999999999999976 8999999999998865
No 245
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.2e-38 Score=347.42 Aligned_cols=204 Identities=52% Similarity=0.902 Sum_probs=181.7
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcCeEEEEcCCCCCCC
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQVPWILS 685 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~~Q~p~l~~ 685 (1445)
++++|+++.|..... +..++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|+|+|++|+|.+++
T Consensus 1 l~~~~l~~~~~~~~~-~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~ 79 (204)
T cd03250 1 ISVEDASFTWDSGEQ-ETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQN 79 (204)
T ss_pred CEEeEEEEecCCCCc-cccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhcc
Confidence 357899999864210 0023699999999999999999999999999999999999999999999999999999999999
Q ss_pred ccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcC
Q 000522 686 GTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVD 765 (1445)
Q Consensus 686 ~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD 765 (1445)
.|++||+.++..+++++..++.+.+++...+..+|.|.+|.+++.+.+||||||||++||||++.+|++++|||||++||
T Consensus 80 ~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD 159 (204)
T cd03250 80 GTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVD 159 (204)
T ss_pred CcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCC
Confidence 99999999987777677788888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCE
Q 000522 766 AQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1445)
Q Consensus 766 ~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~ 810 (1445)
++..+.+++.++.....+++|+|++||+.+.+..||++++|++|+
T Consensus 160 ~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 160 AHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999888887544322234689999999999988899999999984
No 246
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-38 Score=361.49 Aligned_cols=209 Identities=24% Similarity=0.379 Sum_probs=181.1
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999964 469999999999999999999999999999999999999999999999999988888888899999
Q ss_pred EcCCCcccCc-cHHHhcCCCCC--------CC---hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000522 1303 VPQSPFLFEG-SLRDNLDPFHM--------ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1370 (1445)
Q Consensus 1303 VpQdp~lF~g-TIReNLdp~~~--------~s---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1370 (1445)
+||++.+|.+ |+++|+++... .. ++++.++++.+ |++.........||||||||++|||
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~lar 151 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQT---------RINHLADRRLTDLSGGQRQRAFLAM 151 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHc---------CCHHHHcCCcccCCHHHHHHHHHHH
Confidence 9999998877 99999975311 01 12233334433 5554455566789999999999999
Q ss_pred HhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1371 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1371 ALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|++++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.+ ||+|++|++|++++.|++++.
T Consensus 152 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 225 (255)
T PRK11231 152 VLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEV 225 (255)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHh
Confidence 9999999999999999999999999999998764 48999999999999875 899999999999999987653
No 247
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-38 Score=366.08 Aligned_cols=215 Identities=27% Similarity=0.447 Sum_probs=179.9
Q ss_pred cEEEEEEEEEeCCCC---CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCC----ChH
Q 000522 1222 LIEFQNVTMRYKPSL---PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~---~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~ 1294 (1445)
.|+++|++++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999997432 4699999999999999999999999999999999999999999999999998653 345
Q ss_pred hhhcceEEEcCCC--cccCccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHHHH
Q 000522 1295 DLRGRFAVVPQSP--FLFEGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLICL 1368 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp--~lF~gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~L 1368 (1445)
..|++++|+||+| .+|..|+++|+.+.. ..+.++..+ ...+.++.+|++. .......+||+|||||++|
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~~LSgGq~qrl~l 156 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKVGLSEDLISKSPFELSGGQMRRVAI 156 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCChhHhhCCcccCCHHHHHHHHH
Confidence 6788999999998 577889999996321 122222211 1223444457753 4456677899999999999
Q ss_pred HHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCC
Q 000522 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||||+++|++|||||||++||+.+.+.+.+.|++.. ++.|||++||+++.+. -||+|++|++|++++.|+|++
T Consensus 157 aral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (287)
T PRK13641 157 AGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKE 231 (287)
T ss_pred HHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999998764 4789999999999886 589999999999999999875
No 248
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=362.18 Aligned_cols=213 Identities=26% Similarity=0.419 Sum_probs=180.3
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCCCC--ChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1294 (1445)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999963 4699999999999999999999999999999999999984 899999999998753 345
Q ss_pred hhhcceEEEcCCCcccCccHHHhcCCCC----CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFH----MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~gTIReNLdp~~----~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
.+|++++++||+|.+|+.|+++|+.... ... ++++.++++..++.+.+ +...+....+||+|||||+
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~Gq~qr~ 155 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEV-----KSELNKPGTRLSGGQQQRL 155 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchh-----HHHHhCChhhcCHHHHHHH
Confidence 6788999999999999999999997421 111 12244445554443221 2334566678999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+||||++++|+||+|||||++||..+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 156 ~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (250)
T PRK14262 156 CIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTRE 231 (250)
T ss_pred HHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 9999999999999999999999999999999999987778999999999998765 89999999999999998864
No 249
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.9e-38 Score=362.54 Aligned_cols=202 Identities=32% Similarity=0.418 Sum_probs=174.5
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------e
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 673 (1445)
.++++|++..|.+. . +++|+||+|++||+++++|||||||||||++|+|+.+|++|+|.++| .
T Consensus 3 ~i~l~~v~K~yg~~-----~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~ 76 (338)
T COG3839 3 ELELKNVRKSFGSF-----E-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRG 76 (338)
T ss_pred EEEEeeeEEEcCCc-----e-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCC
Confidence 57899999998632 1 59999999999999999999999999999999999999999999987 5
Q ss_pred EEEEcCCCCCCCc-cHHHHHhcCCCCC-------hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000522 674 IAYVPQVPWILSG-TIRDNILFGKNYD-------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1445)
Q Consensus 674 i~y~~Q~p~l~~~-ti~~nI~~g~~~~-------~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 745 (1445)
||+|+|+.-|++- ||+|||.||.... +++.+++.+..++++.++..| ..||||||||||||
T Consensus 77 iamVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAla 145 (338)
T COG3839 77 IAMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALA 145 (338)
T ss_pred EEEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHH
Confidence 9999999999865 9999999986542 467788888888887776554 58999999999999
Q ss_pred HHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhh-hCCEEEEEeCCEEEEecCHhHHHhc
Q 000522 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 823 (1445)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~~~~~~~~ 823 (1445)
||+.++|+++|||||+|+||++....+-..+..-....+.|+|.||||..+.. .||+|++|++|+|.+.|++.|+...
T Consensus 146 RAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~ 224 (338)
T COG3839 146 RALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYER 224 (338)
T ss_pred HHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhC
Confidence 99999999999999999999998887766532211223679999999987754 5999999999999999999999754
No 250
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2e-38 Score=352.89 Aligned_cols=200 Identities=29% Similarity=0.399 Sum_probs=170.3
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChH---hhhcc
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRGR 1299 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~~ 1299 (1445)
++++|++++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+..++.. .+|+.
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 7899999999532 4699999999999999999999999999999999999999999999999999887643 46789
Q ss_pred eEEEcCCCcccC-ccHHHhcCCCC---CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000522 1300 FAVVPQSPFLFE-GSLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1300 i~~VpQdp~lF~-gTIReNLdp~~---~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1445)
++|+||+|.+|. .|+++|+.... ... +++++++++..++ +........+||||||||++||||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l---------~~~~~~~~~~LS~G~~qrl~la~a 151 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGL---------EHKADAFPEQLSGGEQQRVAIARA 151 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC---------hhhhhCChhhCCHHHHHHHHHHHH
Confidence 999999999986 59999986431 111 2334445555444 333344445799999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCe
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGH 1432 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1432 (1445)
|+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.+ ||+|++|++|+
T Consensus 152 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 152 IVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999998864 48999999999999986 89999999985
No 251
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.6e-38 Score=365.35 Aligned_cols=213 Identities=27% Similarity=0.340 Sum_probs=178.8
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChH---hhhc
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLRG 1298 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR~ 1298 (1445)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 5899999999963 4699999999999999999999999999999999999999999999999999876643 3578
Q ss_pred ceEEEcCCCcccCc-cHHHhcCCC----CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000522 1299 RFAVVPQSPFLFEG-SLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1445)
Q Consensus 1299 ~i~~VpQdp~lF~g-TIReNLdp~----~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1445)
+++|+||++.+|++ |+++|+.+. ...+.++..+ ...+.++.+|++........+||||||||++||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LSgGq~qrv~laral~ 159 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHS-----TVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA 159 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHH-----HHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHh
Confidence 89999999999987 999998642 1112111111 1222333446655555556689999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1374 KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
++|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+|++
T Consensus 160 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 230 (269)
T PRK11831 160 LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQA 230 (269)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999998764 37999999999998876 89999999999999998764
No 252
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-38 Score=364.81 Aligned_cols=212 Identities=25% Similarity=0.390 Sum_probs=181.1
Q ss_pred cEEEEEEEEEeCCC----CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCC-hHhh
Q 000522 1222 LIEFQNVTMRYKPS----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP-VRDL 1296 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~----~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~-~~~l 1296 (1445)
.++++|++++|+.. .+++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 58999999999743 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hcceEEEcCCCc--ccCccHHHhcCCCCC---CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000522 1297 RGRFAVVPQSPF--LFEGSLRDNLDPFHM---ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1367 (1445)
Q Consensus 1297 R~~i~~VpQdp~--lF~gTIReNLdp~~~---~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1367 (1445)
|++++|+||+|. +|..|+++|+.+... .+ ++++.++++.+ |++.........||+|||||++
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~---------gL~~~~~~~~~~LS~G~~qrv~ 154 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKV---------GMYEYRRHAPHLLSGGQKQRVA 154 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHC---------CCHhHhhCCcccCCHHHHHHHH
Confidence 899999999984 676789999965321 12 22344444444 4444455556689999999999
Q ss_pred HHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||++++|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+..||+|++|++|++++.|+|++.
T Consensus 155 laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (280)
T PRK13633 155 IAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEI 231 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999998764 38999999999999988999999999999999998663
No 253
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=3.9e-38 Score=354.01 Aligned_cols=206 Identities=24% Similarity=0.313 Sum_probs=174.7
Q ss_pred cEEEEEEEEEeCCCC--CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHh---h
Q 000522 1222 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD---L 1296 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~---l 1296 (1445)
.|+++|++++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 599999999997532 35999999999999999999999999999999999999999999999999998877654 2
Q ss_pred -hcceEEEcCCCcccCc-cHHHhcCCC---CCCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000522 1297 -RGRFAVVPQSPFLFEG-SLRDNLDPF---HMNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1367 (1445)
Q Consensus 1297 -R~~i~~VpQdp~lF~g-TIReNLdp~---~~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1367 (1445)
+++++++||+|.+|++ |+++|+.+. ..... +++.++++.. |++.........||+|||||++
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~Ge~qrl~ 156 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQL---------GLGKRLDHLPAQLSGGEQQRVA 156 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc---------CCHhHhhCChhhCCHHHHHHHH
Confidence 3679999999999885 999998642 11111 2333344444 5544444555689999999999
Q ss_pred HHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhhcCEEEEEeCCeEeee
Q 000522 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLPHC 1436 (1445)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~ 1436 (1445)
|||||+++|++|||||||++||+++.+.+.+.|++.. .++|||+|+|+++.+..||+|++|++|+++|.
T Consensus 157 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 157 LARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999998763 37899999999999999999999999999874
No 254
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-38 Score=344.53 Aligned_cols=200 Identities=30% Similarity=0.466 Sum_probs=169.4
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------e
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------S 673 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------~ 673 (1445)
..|+++|++|.|... + +|+||||++++|++++|+||||||||||+|+|+|.++|.+|+|.+.| .
T Consensus 3 ~~i~v~nl~v~y~~~---~---vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~ 76 (254)
T COG1121 3 PMIEVENLTVSYGNR---P---VLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLR 76 (254)
T ss_pred cEEEEeeeEEEECCE---e---eeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCe
Confidence 368999999999642 2 59999999999999999999999999999999999999999999865 5
Q ss_pred EEEEcCCC---CCCCccHHHHHhcCCCC-----------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000522 674 IAYVPQVP---WILSGTIRDNILFGKNY-----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1445)
Q Consensus 674 i~y~~Q~p---~l~~~ti~~nI~~g~~~-----------~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQk 739 (1445)
||||||.. |-|+.||+|-+..|... |.+..+++++..++. |+. ......|||||+
T Consensus 77 IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~-~~~----------~r~i~~LSGGQ~ 145 (254)
T COG1121 77 IGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGME-DLR----------DRQIGELSGGQK 145 (254)
T ss_pred EEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCch-hhh----------CCcccccCcHHH
Confidence 99999954 77899999999987432 346777888888876 332 234457999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHh
Q 000522 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 818 (1445)
Q Consensus 740 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~ 818 (1445)
|||-|||||.++||+|+|||||+|+|+.++..+++- +.....+|+||++||||++.+.. +|+|+.|+ +++...|+++
T Consensus 146 QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~l-L~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~ 223 (254)
T COG1121 146 QRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDL-LKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPE 223 (254)
T ss_pred HHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChh
Confidence 999999999999999999999999999999988875 33323348999999999998765 99999995 5778899988
Q ss_pred HHHh
Q 000522 819 DLAV 822 (1445)
Q Consensus 819 ~~~~ 822 (1445)
+...
T Consensus 224 ~~~~ 227 (254)
T COG1121 224 EVLT 227 (254)
T ss_pred hccC
Confidence 8754
No 255
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.2e-38 Score=368.65 Aligned_cols=213 Identities=28% Similarity=0.349 Sum_probs=178.9
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 5899999999964 4699999999999999999999999999999999999999999999999998754 356789999
Q ss_pred EEcCCCcccC-ccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1302 VVPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1302 ~VpQdp~lF~-gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
|+||++.++. .|+++|+..+. ..++.+..+.+ .+.++.+|++.........||||||||++|||||+++|+
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~ 155 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFARLESKADVRVALLSGGMKRRLTLARALINDPQ 155 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHCCChhHhcCchhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999886 59999996321 12322222211 122333355544455556799999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1378 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||+|++|++|++++.|+|++.
T Consensus 156 lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 222 (303)
T TIGR01288 156 LLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHAL 222 (303)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999999999999999998763 48899999999999875 899999999999999998654
No 256
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-38 Score=368.55 Aligned_cols=215 Identities=25% Similarity=0.378 Sum_probs=176.7
Q ss_pred cEEEEEEEEEeCCC--------CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCCh
Q 000522 1222 LIEFQNVTMRYKPS--------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV 1293 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~--------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~ 1293 (1445)
.|+++|++++|+.. ...+|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+...+.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 58999999999631 2469999999999999999999999999999999999999999999999999988875
Q ss_pred H---hhhcceEEEcCCCc--ccCc-cHHHhcCC----CCCCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhH
Q 000522 1294 R---DLRGRFAVVPQSPF--LFEG-SLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQ 1362 (1445)
Q Consensus 1294 ~---~lR~~i~~VpQdp~--lF~g-TIReNLdp----~~~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQ 1362 (1445)
. .+|+++++|||||. |++. |+.+|+.. .......+.. ....+.++.+|++. ........|||||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~gL~~~~~~~~p~~LSgGq 159 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERR-----EKALAMMAKVGLRPEHYDRYPHMFSGGQ 159 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHH-----HHHHHHHHHCCCChHHhcCCCccCCHHH
Confidence 4 56789999999994 5553 88888742 1111221111 11223334445542 3455567899999
Q ss_pred HHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCC
Q 000522 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCA 1439 (1445)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p 1439 (1445)
|||++|||||+.+|+|||+||||++||..+.+.|.+.|++.. .+.|+|+|||+++.+.. ||+|+||++|+|+|.|++
T Consensus 160 ~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g~~ 239 (327)
T PRK11308 160 RQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKGTK 239 (327)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999999999998764 38999999999999975 899999999999999986
Q ss_pred CC
Q 000522 1440 AA 1441 (1445)
Q Consensus 1440 ~~ 1441 (1445)
++
T Consensus 240 ~~ 241 (327)
T PRK11308 240 EQ 241 (327)
T ss_pred HH
Confidence 54
No 257
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.9e-38 Score=368.44 Aligned_cols=212 Identities=26% Similarity=0.364 Sum_probs=183.2
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++|++++|++ ..+|+|+||+|++||.+||+||+|||||||+++|.|+++|++|+|.+||.++.. +...+|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999963 469999999999999999999999999999999999999999999999999977 44678899999
Q ss_pred EcCCCcccCc-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1303 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1303 VpQdp~lF~g-TIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
+||+|.+|++ |++|||.+... ...++..+ ...+.++.+|++........+||+|||||++|||||+++|++
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 154 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELVGLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKV 154 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHCCCchHhcCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999987 99999964321 12222111 123344445777666667778999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|+|||||++||+.+.+.+++.|++..+++|||++||+++.+.+ ||||++|++|++++.|++++.
T Consensus 155 liLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~ 219 (301)
T TIGR03522 155 LILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDEL 219 (301)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999988778999999999998876 899999999999999998764
No 258
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-38 Score=361.97 Aligned_cols=219 Identities=22% Similarity=0.324 Sum_probs=187.0
Q ss_pred CCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCC--
Q 000522 1217 WPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII-- 1289 (1445)
Q Consensus 1217 wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~-- 1289 (1445)
-|..+.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 11 ~~~~~~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~ 88 (265)
T PRK14252 11 SPTQQKSEVNKLNFYYGG--YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNIL 88 (265)
T ss_pred cCCCceEEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccc
Confidence 456788999999999964 3699999999999999999999999999999999999975 7999999998874
Q ss_pred --CCChHhhhcceEEEcCCCcccCccHHHhcCCCC---C-----CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCC
Q 000522 1290 --NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---M-----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFS 1359 (1445)
Q Consensus 1290 --~i~~~~lR~~i~~VpQdp~lF~gTIReNLdp~~---~-----~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LS 1359 (1445)
......+|++++|+||+|.+|.+|+++|+.... . ..++++.++++.+++.+ ++....+.....||
T Consensus 89 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----~l~~~~~~~~~~LS 163 (265)
T PRK14252 89 SPEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-----EVKDRLGDLAFNLS 163 (265)
T ss_pred ccccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-----hhhHHHhCCcccCC
Confidence 334567889999999999999999999996431 1 11345666666666543 22344556667899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecC
Q 000522 1360 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGC 1438 (1445)
Q Consensus 1360 gGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~ 1438 (1445)
+|||||++||||++++|+++||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999987667999999999999975 89999999999999998
Q ss_pred CCCC
Q 000522 1439 AAAP 1442 (1445)
Q Consensus 1439 p~~~ 1442 (1445)
+++.
T Consensus 244 ~~~~ 247 (265)
T PRK14252 244 TDTI 247 (265)
T ss_pred HHHH
Confidence 7543
No 259
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.8e-38 Score=319.57 Aligned_cols=199 Identities=29% Similarity=0.391 Sum_probs=171.2
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------eE
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 674 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 674 (1445)
+.++++.|+|... + -..+++|++||+++|+|||||||||||++|.|+..|.+|+|.++| .+
T Consensus 2 l~L~~V~~~y~~~---~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPV 73 (231)
T COG3840 2 LALDDVRFSYGHL---P-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPV 73 (231)
T ss_pred ccccceEEeeCcc---e-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCCh
Confidence 3467788888532 2 246799999999999999999999999999999999999999987 49
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCC-------CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHH
Q 000522 675 AYVPQVPWILSG-TIRDNILFGKN-------YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 746 (1445)
Q Consensus 675 ~y~~Q~p~l~~~-ti~~nI~~g~~-------~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lAR 746 (1445)
++++|+..||.- ||++||-+|.. .+.++.+.+....+|....+.+|. +|||||||||||||
T Consensus 74 SmlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALAR 142 (231)
T COG3840 74 SMLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALAR 142 (231)
T ss_pred hhhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHH
Confidence 999999999976 99999999853 245678888888999988888885 89999999999999
Q ss_pred HHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHHhc
Q 000522 747 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVS 823 (1445)
Q Consensus 747 aly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~~~ 823 (1445)
++.++.+|++||||||||||.-.......+..-...++.|++||||+++.+.. +|+++++++|+|.++|+.+++...
T Consensus 143 clvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 143 CLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 99999999999999999999988877664221113457799999999998776 999999999999999999887643
No 260
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-38 Score=362.15 Aligned_cols=215 Identities=25% Similarity=0.353 Sum_probs=182.2
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CCh
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1293 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~ 1293 (1445)
+.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 46999999999964 4699999999999999999999999999999999999985 48999999999864 445
Q ss_pred HhhhcceEEEcCCCcccCccHHHhcCCCC----CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000522 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1445)
Q Consensus 1294 ~~lR~~i~~VpQdp~lF~gTIReNLdp~~----~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1365 (1445)
..+|++++|+||+|.+|+.|++||+.+.. ... ++.+.++++.+++.+.+. ...+..+..||+|||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-----~~~~~~~~~LS~G~~qr 158 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVK-----DKLNKSALGLSGGQQQR 158 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhh-----hHhcCCcccCCHHHHHH
Confidence 67888999999999999999999996421 112 223445566666543322 23445566899999999
Q ss_pred HHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEe-----CCeEeeecCC
Q 000522 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD-----HGHLPHCGCA 1439 (1445)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~-----~G~vvE~G~p 1439 (1445)
++||||++++|++|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.+ ||++++|+ +|++++.|+|
T Consensus 159 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~~~ 238 (259)
T PRK14260 159 LCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFGVT 238 (259)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeCCH
Confidence 99999999999999999999999999999999999987677999999999999876 79999998 5999999998
Q ss_pred CCC
Q 000522 1440 AAP 1442 (1445)
Q Consensus 1440 ~~~ 1442 (1445)
++.
T Consensus 239 ~~~ 241 (259)
T PRK14260 239 TQI 241 (259)
T ss_pred HHH
Confidence 753
No 261
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.3e-38 Score=352.07 Aligned_cols=197 Identities=32% Similarity=0.465 Sum_probs=165.9
Q ss_pred EEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEE
Q 000522 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1445)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1445)
+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 46899999964 46999999999999999999999999999999999999999999999998874 468899999
Q ss_pred cCCCcc---cCccHHHhcCCCCCC-----------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000522 1304 PQSPFL---FEGSLRDNLDPFHMN-----------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1369 (1445)
Q Consensus 1304 pQdp~l---F~gTIReNLdp~~~~-----------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1369 (1445)
||+|.+ |+.|++||+...... .++++.++++.. |++........+||||||||++||
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LSgG~~qrv~la 144 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERV---------GLSELADRQIGELSGGQQQRVLLA 144 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHc---------CCHHHHhCCcccCCHHHHHHHHHH
Confidence 999976 568999998643211 112334444444 444444455668999999999999
Q ss_pred HHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeec
Q 000522 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G 1437 (1445)
|||+++|++|||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++| +++.|
T Consensus 145 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 145 RALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999998764 68999999999999876 7999999986 55554
No 262
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-38 Score=363.64 Aligned_cols=207 Identities=25% Similarity=0.350 Sum_probs=174.6
Q ss_pred EEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhh----hcc
Q 000522 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGR 1299 (1445)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l----R~~ 1299 (1445)
.++|++.+|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQ--TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCC--ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 56688888864 469999999999999999999999999999999999999999999999999988776543 468
Q ss_pred eEEEcCCCcccC-ccHHHhcCCCC---CCCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000522 1300 FAVVPQSPFLFE-GSLRDNLDPFH---MNDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1300 i~~VpQdp~lF~-gTIReNLdp~~---~~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1445)
++|+||++.+|. .|+++|+.... .... +++.++++. +|++........+||+|||||++||||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LS~Gq~qrv~lAra 174 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALEL---------VGLEGWEHKYPDELSGGMQQRVGLARA 174 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHH---------cCCHhHhhCCcccCCHHHHHHHHHHHH
Confidence 999999999885 59999996421 1111 223334444 455544555566899999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
++++|+||||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+|++
T Consensus 175 l~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 247 (269)
T cd03294 175 LAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEE 247 (269)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999998764 37999999999998865 89999999999999998764
No 263
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-38 Score=360.67 Aligned_cols=213 Identities=26% Similarity=0.390 Sum_probs=181.0
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCCCC--ChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINT--PVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i--~~~ 1294 (1445)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.++... +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 5899999999963 4699999999999999999999999999999999999763 489999999999876 456
Q ss_pred hhhcceEEEcCCCcccCccHHHhcCCCCCC----C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHMN----D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~gTIReNLdp~~~~----s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
..|+.++|+||+|.+|++|+++|+.+.... . ++++.++++.+++.+. +.+..+..+.+||+|||||+
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qrv 158 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDE-----VKDRLHDSALSLSGGQQQRL 158 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchh-----hHHHhhcChhhCCHHHHHHH
Confidence 778899999999999999999999753211 1 1233444444444322 23345666778999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+||||++.+|+++||||||++||.++.+.+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|++++
T Consensus 159 ~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 234 (253)
T PRK14261 159 CIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQ 234 (253)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHH
Confidence 9999999999999999999999999999999999987777999999999999975 89999999999999998754
No 264
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=4e-38 Score=352.64 Aligned_cols=208 Identities=25% Similarity=0.344 Sum_probs=180.6
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.|+++|++++|+. .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5999999999963 46999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcCCCcccCccHHHhcCCCC----CC-ChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHHHHHHHHHhccC
Q 000522 1302 VVPQSPFLFEGSLRDNLDPFH----MN-DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQLICLARALLKS 1375 (1445)
Q Consensus 1302 ~VpQdp~lF~gTIReNLdp~~----~~-sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1445)
|+||+|.+|+.|+++|+.... .. .++++ .+.++.+|++ +.......+||+|||||++||||++++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~---------~~~l~~~~l~~~~~~~~~~~LS~G~~qrv~laral~~~ 155 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIF---------LDDLERFALPDTILTKNIAELSGGEKQRISLIRNLQFM 155 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHHHHH---------HHHHHHcCCChHHhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999996421 11 11122 2344444664 455667778999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhhcCEEEEEe-CCeEeeecCCC
Q 000522 1376 SKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILD-HGHLPHCGCAA 1440 (1445)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~-~G~vvE~G~p~ 1440 (1445)
|+++||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 156 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 156 PKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999999998864 3789999999999999999999995 66777888875
No 265
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=5.2e-38 Score=349.39 Aligned_cols=204 Identities=26% Similarity=0.416 Sum_probs=173.0
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCC--CChHhhhcce
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--TPVRDLRGRF 1300 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~--i~~~~lR~~i 1300 (1445)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 478999999964 469999999999999999999999999999999999999999999999999853 4556788999
Q ss_pred EEEcCCCcccC-ccHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000522 1301 AVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1445)
Q Consensus 1301 ~~VpQdp~lF~-gTIReNLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1445)
+|+||+|.+|+ .|++||+.... ..+.++..+ ...+.++.+|++........+||+|||||++||||++++
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 153 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEE-----RALELLEKVGLADKADAYPAQLSGGQQQRVAIARALAMN 153 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHcCCHhHhhhCccccCHHHHHHHHHHHHHhcC
Confidence 99999999887 59999996532 122222111 123344445666666666778999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeE
Q 000522 1376 SKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1433 (1445)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~v 1433 (1445)
|++|||||||++||+++.+.+.+.|++.. .++|||++||+++.+.+ ||+|++|++|++
T Consensus 154 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 154 PKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999998764 47899999999999975 899999999985
No 266
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=4.5e-38 Score=361.06 Aligned_cols=216 Identities=25% Similarity=0.373 Sum_probs=178.8
Q ss_pred cEEEEEEEEEeCCC-------CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChH
Q 000522 1222 LIEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~ 1294 (1445)
.|+++||+++|++. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999642 35799999999999999999999999999999999999999999999999999887654
Q ss_pred h---hhcceEEEcCCCc--ccC-ccHHHhcCCC----CCCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHH
Q 000522 1295 D---LRGRFAVVPQSPF--LFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQR 1363 (1445)
Q Consensus 1295 ~---lR~~i~~VpQdp~--lF~-gTIReNLdp~----~~~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQr 1363 (1445)
. +|++++|+||+|. +++ .|+++|+... .....++. ...+.+.++.+|++ ...+.....||||||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~gl~~~~~~~~~~~LSgGe~ 156 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQ-----KARIAELLDMVGLRSEDADKLPRQLSGGQL 156 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHcCCChhhhhCChhhCCHHHH
Confidence 3 6788999999983 443 6999998521 11111111 11123344445665 345566778999999
Q ss_pred HHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCC
Q 000522 1364 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAA 1440 (1445)
Q Consensus 1364 Qrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~ 1440 (1445)
||++||||++++|+||||||||++||+++.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 157 qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (265)
T TIGR02769 157 QRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVA 236 (265)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHH
Confidence 999999999999999999999999999999999999987643 7899999999999975 8999999999999999986
Q ss_pred CC
Q 000522 1441 AP 1442 (1445)
Q Consensus 1441 ~~ 1442 (1445)
+.
T Consensus 237 ~~ 238 (265)
T TIGR02769 237 QL 238 (265)
T ss_pred HH
Confidence 54
No 267
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=3.5e-38 Score=355.99 Aligned_cols=211 Identities=28% Similarity=0.388 Sum_probs=177.1
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+++|++++|+. +++|+|+||+|.+||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++|
T Consensus 1 i~i~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGS--FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECC--eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 578999999974 369999999999999999999999999999999999999999999999999987653 4788999
Q ss_pred EcCCCcccCc-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1303 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1303 VpQdp~lF~g-TIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
+||+|.+|++ |+++|+..... .+..+.. ..+.+.++.+|+.........+||+||+||++||||++++|++
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~l 151 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIK-----ARVEELLELVQLEGLGDRYPNQLSGGQRQRVALARALAVEPQV 151 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHH-----HHHHHHHHHcCCHhHhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999986 99999964321 1111110 1123344444554444555568999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++|||||++||.++.+.+.+.|++..+ ++|||++||+++.+.. ||+|++|++|+++|.|++++.
T Consensus 152 lllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 218 (237)
T TIGR00968 152 LLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEV 218 (237)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999987643 7999999999999866 899999999999999987653
No 268
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-38 Score=363.75 Aligned_cols=214 Identities=25% Similarity=0.388 Sum_probs=180.3
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CCh
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPV 1293 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~ 1293 (1445)
..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 38 ~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 46999999999964 369999999999999999999999999999999999997 689999999999865 345
Q ss_pred HhhhcceEEEcCCCcccCccHHHhcCCCC---CC---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000522 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1367 (1445)
Q Consensus 1294 ~~lR~~i~~VpQdp~lF~gTIReNLdp~~---~~---sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1367 (1445)
..+|++++|+||++.+|++|+++|+.... .. .+++++++++..++...+ ....+....+||||||||++
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-----~~~~~~~~~~LSgGe~qrv~ 190 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEV-----KDQLDSSGLDLSGGQQQRLC 190 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchh-----HHHHhCCcccCCHHHHHHHH
Confidence 67889999999999999999999996421 11 123445555555443211 12345666789999999999
Q ss_pred HHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEE-EEeCCeEeeecCCCC
Q 000522 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEIL-ILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~-Vl~~G~vvE~G~p~~ 1441 (1445)
|||||+++|+||||||||++||.++.+.+.+.|++..+++|||+|+|+++.+.. |||++ +|++|+|++.|++.+
T Consensus 191 LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~ 266 (285)
T PRK14254 191 IARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDK 266 (285)
T ss_pred HHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHH
Confidence 999999999999999999999999999999999988777899999999999876 89975 579999999998754
No 269
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-38 Score=362.08 Aligned_cols=211 Identities=20% Similarity=0.295 Sum_probs=182.2
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
-.|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999974 3699999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEcCCCcccC-ccHHHhcCCCC-C-------CC---hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000522 1301 AVVPQSPFLFE-GSLRDNLDPFH-M-------ND---DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1368 (1445)
Q Consensus 1301 ~~VpQdp~lF~-gTIReNLdp~~-~-------~s---d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1368 (1445)
+|+||++.+|. .|+++|+.+.. . .. +++++++++.. |++........+||+|||||++|
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~Gq~qrv~l 154 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQAT---------GITHLADQSVDTLSGGQRQRAWI 154 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHc---------CCHHHhcCCcccCChHHHHHHHH
Confidence 99999998875 59999997531 1 01 12233444443 55544556667899999999999
Q ss_pred HHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||++++|++|||||||++||+++.+.+.+.|++.. .++|||+++|+++.+.+ ||+|++|++|++++.|++++.
T Consensus 155 aral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 155 AMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999998764 37899999999998865 899999999999999987653
No 270
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-38 Score=362.17 Aligned_cols=210 Identities=24% Similarity=0.378 Sum_probs=177.6
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCC--CChHhhhcce
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIIN--TPVRDLRGRF 1300 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~--i~~~~lR~~i 1300 (1445)
++++||+++|+. ..++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...+|++|
T Consensus 2 l~~~~l~~~~~~-~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPD-GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCC-CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 789999999963 3469999999999999999999999999999999999999999999999999853 3345678999
Q ss_pred EEEcCCC--cccCccHHHhcCCCC---CCChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000522 1301 AVVPQSP--FLFEGSLRDNLDPFH---MNDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1301 ~~VpQdp--~lF~gTIReNLdp~~---~~sd~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1445)
+|+||+| .+|+.|++||+.... ..+.+ ++.++++.+ |++.........||+|||||++||||
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~---------~L~~~~~~~~~~LS~Gq~qrv~lara 151 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAV---------GMEGFENKPPHHLSGGQKKRVAIAGI 151 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHC---------CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 9999998 578899999996421 12222 233333433 45444444556899999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++++|++|||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+|++.
T Consensus 152 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 224 (275)
T PRK13639 152 LAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEV 224 (275)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999998764 48999999999999875 899999999999999998763
No 271
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-38 Score=359.50 Aligned_cols=214 Identities=23% Similarity=0.389 Sum_probs=182.5
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1294 (1445)
.++++||+++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+.+ |++|+|.+||.++.. .+..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 3789999999964 469999999999999999999999999999999999875 389999999999875 3466
Q ss_pred hhhcceEEEcCCCcccCccHHHhcCCCC---CC-Ch----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-DD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~gTIReNLdp~~---~~-sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
.+|++++|+||+|.+|++|+++|+.+.. .. +. +++.++++.+++.+.+.. ..+..+.+||+|||||+
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-----~~~~~~~~LS~Gq~qrv 155 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKD-----KLDKSALGLSGGQQQRL 155 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHH-----HHhCCcccCCHHHHHHH
Confidence 7899999999999999999999997431 11 11 234556666666544332 23555678999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+||||++++|+||+|||||++||..+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+|.+.
T Consensus 156 ~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 156 CIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999988778999999999998877 799999999999999998653
No 272
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-38 Score=360.56 Aligned_cols=214 Identities=24% Similarity=0.344 Sum_probs=182.3
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEECCeeCCC--CChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIIN--TPVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~--i~~~ 1294 (1445)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGS--FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECC--EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 5899999999964 369999999999999999999999999999999999986 479999999999853 4566
Q ss_pred hhhcceEEEcCCCcccCccHHHhcCCCCC---C---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1368 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~gTIReNLdp~~~---~---sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1368 (1445)
.+|++++++||++.+|+.|+++|+.+... . .++++.++++.+++.+.+. ...+..+.+||||||||++|
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-----~~~~~~~~~LSgGq~qrv~l 162 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-----DKLKQSGLSLSGGQQQRLCI 162 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-----HHhcCCcccCCHHHHHHHHH
Confidence 78899999999999998999999975321 1 1234455566666654332 23455667899999999999
Q ss_pred HHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEe---------CCeEeeecC
Q 000522 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD---------HGHLPHCGC 1438 (1445)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~---------~G~vvE~G~ 1438 (1445)
|||++++|+||||||||++||+++.+.+.+.|++..+++|||++||+++.+.. ||||++|+ +|++++.|+
T Consensus 163 aral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~ 242 (264)
T PRK14243 163 ARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEFDR 242 (264)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEeCC
Confidence 99999999999999999999999999999999987777899999999998865 79999998 899999999
Q ss_pred CCCC
Q 000522 1439 AAAP 1442 (1445)
Q Consensus 1439 p~~~ 1442 (1445)
+++.
T Consensus 243 ~~~~ 246 (264)
T PRK14243 243 TEKI 246 (264)
T ss_pred HHHH
Confidence 8654
No 273
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.7e-38 Score=370.93 Aligned_cols=213 Identities=28% Similarity=0.378 Sum_probs=179.8
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+...+ ...|++++
T Consensus 41 ~i~i~nl~k~y~~--~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGD--KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 5999999999964 36999999999999999999999999999999999999999999999999997654 56789999
Q ss_pred EEcCCCcccC-ccHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1302 VVPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1302 ~VpQdp~lF~-gTIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
|+||++.++. .|++||+.++.. .+..+..+. ..+.++.+|++........+||+|||||++|||||+.+|+
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P~ 192 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFARLESKADARVSDLSGGMKRRLTLARALINDPQ 192 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCCchhhCCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999875 599999975321 122222111 1223333355544455556799999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1378 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||+|++|++|++++.|+|++.
T Consensus 193 lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l 259 (340)
T PRK13536 193 LLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHAL 259 (340)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHH
Confidence 999999999999999999999998864 48999999999999975 899999999999999998764
No 274
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-38 Score=371.41 Aligned_cols=214 Identities=19% Similarity=0.311 Sum_probs=174.3
Q ss_pred cEEEEEEEEEeCCCC--CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC----CCCcEEEECCeeCCCCChHh
Q 000522 1222 LIEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP----ICGGQILVDGLNIINTPVRD 1295 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~----~~~G~I~IDG~di~~i~~~~ 1295 (1445)
.++++|++++|+... ..+|+||||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 479999999997532 369999999999999999999999999999999999997 48999999999999988776
Q ss_pred hhc----ceEEEcCCCc--ccCc-cHHHhc----CCCCCCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCCh
Q 000522 1296 LRG----RFAVVPQSPF--LFEG-SLRDNL----DPFHMND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSV 1360 (1445)
Q Consensus 1296 lR~----~i~~VpQdp~--lF~g-TIReNL----dp~~~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSg 1360 (1445)
+|+ ++++|||+|. +.+. |+.+|+ ....... .+++.++|+.+++.+. ....+....+|||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~------~~~l~~~p~~LSg 156 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDP------ASRLDVYPHQLSG 156 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh------HHHHhCCchhCCH
Confidence 653 6999999995 4432 565544 3221112 1234444444443211 1234566778999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHh-hcCEEEEEeCCeEeeec
Q 000522 1361 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1361 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G 1437 (1445)
|||||++|||||+.+|++||+||||++||..+...+.+.|++.. .+.|+|+|||+++.+. .||||+||++|+|+|.|
T Consensus 157 Gq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~g 236 (326)
T PRK11022 157 GMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETG 236 (326)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 99999999999999999999999999999999999999998864 3889999999999985 58999999999999999
Q ss_pred CCCC
Q 000522 1438 CAAA 1441 (1445)
Q Consensus 1438 ~p~~ 1441 (1445)
++++
T Consensus 237 ~~~~ 240 (326)
T PRK11022 237 KAHD 240 (326)
T ss_pred CHHH
Confidence 8754
No 275
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-38 Score=358.63 Aligned_cols=216 Identities=24% Similarity=0.351 Sum_probs=182.5
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhh-hcce
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1300 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1300 (1445)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5899999999963 469999999999999999999999999999999999999999999999999988876554 4569
Q ss_pred EEEcCCCcccCc-cHHHhcCCCCC-----------CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFHM-----------ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1364 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~~-----------~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1364 (1445)
+|+||+|.+|++ |+++|+.+... .. +.+..+.. ....+.++.+|++...+....+||+||||
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~gl~~~~~~~~~~LS~G~~q 160 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEAL--DRAATWLERVGLLEHANRQAGNLAYGQQR 160 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHH--HHHHHHHHhCChhhhhhCChhhCCHHHHH
Confidence 999999999986 99999975311 00 00000111 11234455557777777788899999999
Q ss_pred HHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|++||||++++|+||||||||++||+.+.+.+.+.|++..+ ++|||++||+++.+.+ ||+|++|++|++++.|++++
T Consensus 161 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 240 (255)
T PRK11300 161 RLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEE 240 (255)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHH
Confidence 99999999999999999999999999999999999987642 7899999999999876 89999999999999998865
No 276
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.9e-37 Score=355.98 Aligned_cols=213 Identities=38% Similarity=0.661 Sum_probs=191.7
Q ss_pred CCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcCeEEEEcCC
Q 000522 601 SKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASGSIAYVPQV 680 (1445)
Q Consensus 601 ~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~~i~y~~Q~ 680 (1445)
+.+..++++|+++.+ +++|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++|.|+|++|+
T Consensus 35 ~~~~~l~i~nls~~~--------~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g~i~yv~q~ 106 (282)
T cd03291 35 SDDNNLFFSNLCLVG--------APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSGRISFSSQF 106 (282)
T ss_pred CCCCeEEEEEEEEec--------ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEEEEeCc
Confidence 345679999999852 225999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCC
Q 000522 681 PWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDV 760 (1445)
Q Consensus 681 p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~ 760 (1445)
+++++.|++||+.++...++.++.+.++++++...+..+|.+.++.+++++.+||||||||++||||++.+|+++|||||
T Consensus 107 ~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEP 186 (282)
T cd03291 107 SWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSP 186 (282)
T ss_pred ccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 99999999999998765555667788888999888999999998999999999999999999999999999999999999
Q ss_pred CcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHh
Q 000522 761 LSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 761 ~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
|++||+.+.+.+.+.++.. +.+++|+|++||+++.+..||++++|++|++++.|+.+++..
T Consensus 187 t~gLD~~~~~~l~~~ll~~-~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 247 (282)
T cd03291 187 FGYLDVFTEKEIFESCVCK-LMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQS 247 (282)
T ss_pred CccCCHHHHHHHHHHHHHH-hhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999988887754322 345789999999999998899999999999999999988754
No 277
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-37 Score=358.36 Aligned_cols=214 Identities=27% Similarity=0.392 Sum_probs=181.0
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCCCCC-hHh
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTP-VRD 1295 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i~-~~~ 1295 (1445)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 6899999999964 4699999999999999999999999999999999999986 6999999999997663 456
Q ss_pred hhcceEEEcCCCcccCccHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCc----hhhhcCCCCCChhHHHHHH
Q 000522 1296 LRGRFAVVPQSPFLFEGSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQLIC 1367 (1445)
Q Consensus 1296 lR~~i~~VpQdp~lF~gTIReNLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLd----t~v~e~G~~LSgGQrQrl~ 1367 (1445)
+|++++|+||+|.+|+.|+++|+.... ..+++++.+.. .+.++.+|++ +.+.....+||+|||||++
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~ 173 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVA-----QARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLC 173 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHcCCCchhhhHhhCCcccCCHHHHHHHH
Confidence 789999999999999999999997431 12333332211 1223333443 3456667789999999999
Q ss_pred HHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||++++|+||||||||++||..+.+.+.+.|++..+++|||+|||+++.+.+ ||||++|++|++++.|++++.
T Consensus 174 LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~ 249 (276)
T PRK14271 174 LARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQL 249 (276)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999999999887667999999999999876 899999999999999987653
No 278
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-38 Score=362.01 Aligned_cols=208 Identities=23% Similarity=0.328 Sum_probs=176.0
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCC--CCChHhhhcce
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII--NTPVRDLRGRF 1300 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~--~i~~~~lR~~i 1300 (1445)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. ..+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 789999999963 46999999999999999999999999999999999999999999999999985 34456778899
Q ss_pred EEEcCCCc--ccCccHHHhcCCCC---CCChHH----HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000522 1301 AVVPQSPF--LFEGSLRDNLDPFH---MNDDLK----IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1301 ~~VpQdp~--lF~gTIReNLdp~~---~~sd~e----i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1445)
+|+||+|. ++..|+.+|+.... ..++++ +.++++.. |++........+||||||||++||||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LSgG~~qrl~lara 150 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLV---------DAQHFRHQPIQCLSHGQKKRVAIAGA 150 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc---------CCHhHhcCCchhCCHHHHHHHHHHHH
Confidence 99999985 57789999986421 112222 23333333 44443444556899999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|+|++
T Consensus 151 L~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 222 (271)
T PRK13638 151 LVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGE 222 (271)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999998764 47899999999999865 89999999999999998864
No 279
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-38 Score=358.28 Aligned_cols=213 Identities=24% Similarity=0.355 Sum_probs=181.0
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCC-CCChHh
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNII-NTPVRD 1295 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~-~i~~~~ 1295 (1445)
.++++|++++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4899999999963 4699999999999999999999999999999999999986 5999999999986 456678
Q ss_pred hhcceEEEcCCCcccCccHHHhcCCCC---CCC-h----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000522 1296 LRGRFAVVPQSPFLFEGSLRDNLDPFH---MND-D----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1367 (1445)
Q Consensus 1296 lR~~i~~VpQdp~lF~gTIReNLdp~~---~~s-d----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1367 (1445)
+|+.++|+||+|.+|++|+++|+.... ... + +++.++++.+++.+.+ .........+||+|||||++
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~LS~G~~qrv~ 155 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEV-----KDRLKSHAFGLSGGQQQRLC 155 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhh-----hHHhhcCcccCCHHHHHHHH
Confidence 899999999999999999999997431 111 1 2233444444443221 23445566789999999999
Q ss_pred HHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
||||++.+|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 156 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 230 (249)
T PRK14253 156 IARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQV 230 (249)
T ss_pred HHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999987677999999999999886 89999999999999998754
No 280
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-38 Score=366.18 Aligned_cols=215 Identities=24% Similarity=0.400 Sum_probs=182.0
Q ss_pred CccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEECCeeCCCC--C
Q 000522 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--P 1292 (1445)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~i--~ 1292 (1445)
+..|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++... +
T Consensus 43 ~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 43 DAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred CceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 446999999999964 469999999999999999999999999999999999986 6899999999998753 4
Q ss_pred hHhhhcceEEEcCCCcccCccHHHhcCCCCC---------------C-----ChHHHHHHHHHccHHHHHHhCCCchhhh
Q 000522 1293 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---------------N-----DDLKIWSVLEKCHVKEEVEAVGLETFVK 1352 (1445)
Q Consensus 1293 ~~~lR~~i~~VpQdp~lF~gTIReNLdp~~~---------------~-----sd~ei~~aL~~~~l~~~i~~lgLdt~v~ 1352 (1445)
...+|++++|+||++.+|++|+++|+..... . .++++.++++.+++.+. ++...+
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----~~~~~~ 195 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDE-----VNDRLD 195 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchh-----hhHHhc
Confidence 5678899999999999999999999974210 0 12234445555544322 234456
Q ss_pred cCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEE-EEEeC
Q 000522 1353 ESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEI-LILDH 1430 (1445)
Q Consensus 1353 e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI-~Vl~~ 1430 (1445)
....+||||||||++|||||+++|+||||||||++||..+.+.+.+.|++..++.|+|+|||+++.+.. ||+| ++|++
T Consensus 196 ~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~~ 275 (305)
T PRK14264 196 DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLTG 275 (305)
T ss_pred CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEecC
Confidence 667789999999999999999999999999999999999999999999988777899999999999876 8997 56899
Q ss_pred CeEeeecCCCC
Q 000522 1431 GHLPHCGCAAA 1441 (1445)
Q Consensus 1431 G~vvE~G~p~~ 1441 (1445)
|++++.|++++
T Consensus 276 G~i~~~g~~~~ 286 (305)
T PRK14264 276 GELVEYDDTDK 286 (305)
T ss_pred CEEEEeCCHHH
Confidence 99999998764
No 281
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.2e-38 Score=333.07 Aligned_cols=204 Identities=31% Similarity=0.399 Sum_probs=174.7
Q ss_pred CceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------
Q 000522 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1445)
Q Consensus 603 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 672 (1445)
+..|+++++++++.. +.+++|+||+|++||+++|+|||||||||||++|+|+++|++|+|.++|
T Consensus 6 ~~~I~vr~v~~~fG~------~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~ 79 (263)
T COG1127 6 EPLIEVRGVTKSFGD------RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEE 79 (263)
T ss_pred cceEEEeeeeeecCC------EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHH
Confidence 567999999999853 3469999999999999999999999999999999999999999999987
Q ss_pred ------eEEEEcCCCCCCCc-cHHHHHhcCC----CCChhhHH----HHHHHhcchHH-HhhccCCCcccccCCCCccch
Q 000522 673 ------SIAYVPQVPWILSG-TIRDNILFGK----NYDPQSYS----ETLKACTLDVD-ISLMVGGDMAYIGEKGVNLSG 736 (1445)
Q Consensus 673 ------~i~y~~Q~p~l~~~-ti~~nI~~g~----~~~~~~~~----~v~~~~~l~~d-~~~~~~gd~t~vg~~g~~LSG 736 (1445)
++|+++|+--||+. ||+||+.|.. ..+++.++ .-+++++|..+ .+.+| ..|||
T Consensus 80 ~~~ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSG 148 (263)
T COG1127 80 LYEIRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSG 148 (263)
T ss_pred HHHHHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcc
Confidence 59999999999987 9999999952 34444443 45678899887 66666 48999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcC-cccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEe
Q 000522 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMG-PHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1445)
Q Consensus 737 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~-~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1445)
|.+.|+|||||+..||+++++|||||+|||.++..+-+. +.. ...-+.|+|+|||+++.+.. ||+|+++.||+|...
T Consensus 149 GM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~L-I~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~ 227 (263)
T COG1127 149 GMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDEL-IRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAE 227 (263)
T ss_pred hHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHH-HHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEe
Confidence 999999999999999999999999999999987755443 432 12236799999999998776 899999999999999
Q ss_pred cCHhHHHhcc
Q 000522 815 GSSADLAVSL 824 (1445)
Q Consensus 815 g~~~~~~~~~ 824 (1445)
|+++|+.+.+
T Consensus 228 Gt~~el~~sd 237 (263)
T COG1127 228 GTPEELLASD 237 (263)
T ss_pred CCHHHHHhCC
Confidence 9999997643
No 282
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-38 Score=372.33 Aligned_cols=213 Identities=27% Similarity=0.396 Sum_probs=180.4
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
..++++|++++|+. .++|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++.+.+. .|+++
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 46999999999964 469999999999999999999999999999999999999999999999999987764 47789
Q ss_pred EEEcCCCcccCc-cHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
+||+|++.+|+. |++||+.+.- ..+..++.+ .+.+.++.+|++........+||||||||++|||||+++|
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P 168 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRP 168 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 9999997542 122222221 1223344446665556666789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++|+||||||+||..+.+.+.+.|++.. .+.|+|+|||+++.+.. ||||++|++|++++.|+|++.
T Consensus 169 ~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~ 237 (377)
T PRK11607 169 KLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEI 237 (377)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHH
Confidence 9999999999999999999988777653 37999999999998754 899999999999999998754
No 283
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-38 Score=359.87 Aligned_cols=214 Identities=24% Similarity=0.393 Sum_probs=179.0
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~~ 1294 (1445)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGS--FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECC--EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 4899999999964 3699999999999999999999999999999999999974 69999999999854 4456
Q ss_pred hhhcceEEEcCCCcccC-ccHHHhcCCCC----CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFE-GSLRDNLDPFH----MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~-gTIReNLdp~~----~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1365 (1445)
.+|+.++++||++.+|. .|+++|+.... ..+ ++++.++++.+++.+.+ +........+||||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LS~G~~qr 156 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEV-----KDRLDKPGGGLSGGQQQR 156 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-----hhHhhCCcccCCHHHHHH
Confidence 78899999999999997 49999986321 111 12334445554443211 234455667899999999
Q ss_pred HHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEe------CCeEeeecC
Q 000522 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD------HGHLPHCGC 1438 (1445)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~------~G~vvE~G~ 1438 (1445)
++||||++++|++|||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||+|++|+ +|+|++.|+
T Consensus 157 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~~~ 236 (258)
T PRK14241 157 LCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEIDD 236 (258)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEecCC
Confidence 99999999999999999999999999999999999887667999999999999865 89999997 899999999
Q ss_pred CCCC
Q 000522 1439 AAAP 1442 (1445)
Q Consensus 1439 p~~~ 1442 (1445)
|++.
T Consensus 237 ~~~~ 240 (258)
T PRK14241 237 TEKI 240 (258)
T ss_pred HHHH
Confidence 8643
No 284
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8e-38 Score=338.06 Aligned_cols=195 Identities=28% Similarity=0.369 Sum_probs=160.0
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|++-.|...... ..+|+++||+|++||+++|+|||||||||||+.|-|...|++|.|.++|
T Consensus 2 i~~~~v~k~y~~~~~~--~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~ 79 (226)
T COG1136 2 IELKNVSKIYGLGGEK--VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAK 79 (226)
T ss_pred cEEeeeEEEeccCCcc--eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHH
Confidence 3466777666543221 4569999999999999999999999999999999999999999999987
Q ss_pred ----eEEEEcCCCCCCCc-cHHHHHhcC----CCCC---hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHH
Q 000522 673 ----SIAYVPQVPWILSG-TIRDNILFG----KNYD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 740 (1445)
Q Consensus 673 ----~i~y~~Q~p~l~~~-ti~~nI~~g----~~~~---~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkq 740 (1445)
+|||++|+..|.+. |++|||.+. .... .++.++.++..+|.+... ......|||||||
T Consensus 80 ~R~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQ 149 (226)
T COG1136 80 LRRKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQ 149 (226)
T ss_pred HHHHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHH
Confidence 49999999987765 999999853 2221 345556666666654433 2345689999999
Q ss_pred HHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEE
Q 000522 741 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1445)
Q Consensus 741 Rv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~ 812 (1445)
|||||||++.+|++++.||||.+||.++++.+++.+......+|+|+|+|||+......|||++.|+||++.
T Consensus 150 RVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 150 RVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 999999999999999999999999999999999863322134578999999999999999999999999954
No 285
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-37 Score=356.09 Aligned_cols=209 Identities=26% Similarity=0.367 Sum_probs=179.9
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 2 MLEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 3789999999964 46999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcCCCcc-cCccHHHhcCCCCC-C--C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000522 1302 VVPQSPFL-FEGSLRDNLDPFHM-N--D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1445)
Q Consensus 1302 ~VpQdp~l-F~gTIReNLdp~~~-~--s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1445)
|+||++.+ +..|++||+..... . + ++++.++++.. |++.........||||||||++|||||+
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LSgGe~qrv~la~al~ 150 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQV---------DLAHLAGRDYPQLSGGEQQRVQLARVLA 150 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHc---------CCHhHhcCCcccCCHHHHHHHHHHHHHh
Confidence 99999987 56799999865321 1 1 12233444444 5544455556789999999999999999
Q ss_pred ------cCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCC
Q 000522 1374 ------KSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1374 ------r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
++|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+. -||+|++|++|++++.|++++
T Consensus 151 ~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (258)
T PRK13548 151 QLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAE 227 (258)
T ss_pred cccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHH
Confidence 5999999999999999999999999998764 4789999999999887 589999999999999998765
No 286
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=8.9e-38 Score=367.01 Aligned_cols=212 Identities=25% Similarity=0.388 Sum_probs=175.9
Q ss_pred cEEEEEEEEEeCCC--CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCeeCCCCChHhh
Q 000522 1222 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC---GGQILVDGLNIINTPVRDL 1296 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~---~G~I~IDG~di~~i~~~~l 1296 (1445)
.++++|++++|+.. ..++|+||||+|++||++||+|+||||||||+++|.|+++|. +|+|.+||.|+..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 58999999999632 246999999999999999999999999999999999999996 9999999999999987766
Q ss_pred h----cceEEEcCCC--cccC-ccHHHhcC----CCCCCChHH----HHHHHHHccHHHHHHhCCCc---hhhhcCCCCC
Q 000522 1297 R----GRFAVVPQSP--FLFE-GSLRDNLD----PFHMNDDLK----IWSVLEKCHVKEEVEAVGLE---TFVKESGISF 1358 (1445)
Q Consensus 1297 R----~~i~~VpQdp--~lF~-gTIReNLd----p~~~~sd~e----i~~aL~~~~l~~~i~~lgLd---t~v~e~G~~L 1358 (1445)
| ++|++||||| .+++ -|+.+|+. .+...+.++ +.+.|+.+ |++ ..++..+..|
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~v---------gL~~~~~~~~~~p~~L 162 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAV---------KMPEARKRMKMYPHEF 162 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc---------CCCChHHHhcCCcccC
Confidence 4 4799999999 4555 37777662 222222222 22333333 443 2345667789
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEee
Q 000522 1359 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPH 1435 (1445)
Q Consensus 1359 SgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE 1435 (1445)
|||||||++|||||+.+|++||+|||||+||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|
T Consensus 163 SgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive 242 (330)
T PRK09473 163 SGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTME 242 (330)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999987643 7899999999999974 89999999999999
Q ss_pred ecCCCCC
Q 000522 1436 CGCAAAP 1442 (1445)
Q Consensus 1436 ~G~p~~~ 1442 (1445)
.|++++.
T Consensus 243 ~g~~~~i 249 (330)
T PRK09473 243 YGNARDV 249 (330)
T ss_pred ECCHHHH
Confidence 9987553
No 287
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=8.1e-38 Score=357.43 Aligned_cols=209 Identities=22% Similarity=0.310 Sum_probs=179.9
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 789999999964 469999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EcCCCc-ccCccHHHhcCCCCC--------C---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000522 1303 VPQSPF-LFEGSLRDNLDPFHM--------N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1370 (1445)
Q Consensus 1303 VpQdp~-lF~gTIReNLdp~~~--------~---sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1370 (1445)
+||++. .+..|+++|+..+.. . .++++.++++.+ |+..........||+|||||++|||
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrl~la~ 150 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALART---------ELSHLADRDMSTLSGGERQRVHVAR 150 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHc---------CcHhhhcCCcccCCHHHHHHHHHHH
Confidence 999995 456799999965321 0 112334444444 4444445556689999999999999
Q ss_pred HhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCCC
Q 000522 1371 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1371 ALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|++.+|+++||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|++++.
T Consensus 151 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 224 (256)
T TIGR03873 151 ALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREV 224 (256)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHh
Confidence 9999999999999999999999999999998764 3789999999999995 5999999999999999987653
No 288
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-37 Score=359.27 Aligned_cols=215 Identities=25% Similarity=0.350 Sum_probs=182.2
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CCh
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPV 1293 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~ 1293 (1445)
-.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 19 SVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred ceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 36999999999964 3699999999999999999999999999999999999864 59999999999864 344
Q ss_pred HhhhcceEEEcCCCcccCccHHHhcCCCCC---C---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000522 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFHM---N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1367 (1445)
Q Consensus 1294 ~~lR~~i~~VpQdp~lF~gTIReNLdp~~~---~---sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1367 (1445)
..+|++++|+||++.+|++|+++|+..... . .++++.++++.+++.+.+ ..........||||||||++
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LSgGq~qrv~ 171 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEV-----KDKLKEKGTALSGGQQQRLC 171 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhh-----HHHhcCCcccCCHHHHHHHH
Confidence 567899999999999998999999965321 1 133445556666554332 22344556789999999999
Q ss_pred HHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEe---------CCeEeeec
Q 000522 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD---------HGHLPHCG 1437 (1445)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~---------~G~vvE~G 1437 (1445)
|||||+++|+||||||||++||..+.+.+.+.|++..+++|||+|+|+++.+.. ||+|++|+ +|++++.|
T Consensus 172 LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~g 251 (274)
T PRK14265 172 IARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEFS 251 (274)
T ss_pred HHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEeC
Confidence 999999999999999999999999999999999988778999999999998865 89999997 89999999
Q ss_pred CCCCC
Q 000522 1438 CAAAP 1442 (1445)
Q Consensus 1438 ~p~~~ 1442 (1445)
++++.
T Consensus 252 ~~~~~ 256 (274)
T PRK14265 252 PTEQM 256 (274)
T ss_pred CHHHH
Confidence 98653
No 289
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.7e-37 Score=355.23 Aligned_cols=214 Identities=22% Similarity=0.367 Sum_probs=179.7
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCee-----CCCCChHh-
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN-----IINTPVRD- 1295 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~d-----i~~i~~~~- 1295 (1445)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 5899999999964 469999999999999999999999999999999999999999999999999 87776654
Q ss_pred ---hhcceEEEcCCCc--ccC-ccHHHhcCC----CCCCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHH
Q 000522 1296 ---LRGRFAVVPQSPF--LFE-GSLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQ 1364 (1445)
Q Consensus 1296 ---lR~~i~~VpQdp~--lF~-gTIReNLdp----~~~~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQ 1364 (1445)
.|+.++|+||+|. ++. .|+++|+.. +......++.+ ...+.++.+|++ +..+..+.+|||||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~LS~Gq~q 158 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERVEIDAARIDDLPTTFSGGMQQ 158 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHcCCChhHHhCCCccCCHHHHH
Confidence 3567999999984 343 478888742 11111112211 234555666776 4677888899999999
Q ss_pred HHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|++||||++++|+||||||||++||+++.+.+.+.|++..+ +.|||+|||+++.+.+ ||+|++|++|++++.|+|++
T Consensus 159 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 238 (258)
T PRK11701 159 RLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGLTDQ 238 (258)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999987643 7899999999999985 89999999999999999865
Q ss_pred C
Q 000522 1442 P 1442 (1445)
Q Consensus 1442 ~ 1442 (1445)
.
T Consensus 239 ~ 239 (258)
T PRK11701 239 V 239 (258)
T ss_pred H
Confidence 4
No 290
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-38 Score=356.66 Aligned_cols=213 Identities=26% Similarity=0.360 Sum_probs=179.0
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--C---CCcEEEECCeeCCC--CChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP--I---CGGQILVDGLNIIN--TPVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~--~---~~G~I~IDG~di~~--i~~~ 1294 (1445)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 4899999999974 469999999999999999999999999999999999975 4 58999999999864 3455
Q ss_pred hhhcceEEEcCCCcccCccHHHhcCCCC---C-CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFH---M-ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~gTIReNLdp~~---~-~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
.+|++++|+||+|.+|++|+++|+.... . .. ++++.++++.+++.+. +.........+||+|||||+
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----i~~~~~~~~~~LS~Gq~qrv 157 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDE-----VKDHLHESALSLSGGQQQRV 157 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccc-----hhhHHhcCcccCCHHHHHHH
Confidence 6788999999999999999999986421 1 11 1233444455444321 22344556678999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+||||++++|+||||||||++||.++.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+|.+
T Consensus 158 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14255 158 CIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQ 233 (252)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999987667899999999999875 89999999999999998754
No 291
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-38 Score=352.17 Aligned_cols=210 Identities=28% Similarity=0.393 Sum_probs=176.7
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+++|++++|+. .++++|+||+|+|||++||+|+||||||||+++|.|+++|.+|+|.+||.++...+. .|+.+++
T Consensus 1 l~~~~l~~~~~~--~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGG--FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 478999999974 369999999999999999999999999999999999999999999999999987664 3678999
Q ss_pred EcCCCcccCc-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1303 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1303 VpQdp~lF~g-TIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
+||+|.+|.+ |+++|+.+... .+..... ....+.++.+|++........+||+|||||++||||++++|++
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~lS~G~~qrl~laral~~~p~l 151 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIK-----ERVAEALDLVQLEGYANRKPSQLSGGQQQRVAIARALVNEPKV 151 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999976 99999864211 1111110 1122333334666556666678999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+||||||++||..+.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|++.+
T Consensus 152 lllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~ 217 (232)
T cd03300 152 LLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEE 217 (232)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHH
Confidence 999999999999999999999987643 8999999999999875 79999999999999998654
No 292
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-38 Score=372.51 Aligned_cols=200 Identities=27% Similarity=0.367 Sum_probs=168.8
Q ss_pred ccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhh----hcceEEEcCCCcccCc-
Q 000522 1238 AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL----RGRFAVVPQSPFLFEG- 1312 (1445)
Q Consensus 1238 ~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l----R~~i~~VpQdp~lF~g- 1312 (1445)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.|+...+...+ |++++|+||++.+|+.
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999998877654 4689999999999975
Q ss_pred cHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCC
Q 000522 1313 SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVD 1389 (1445)
Q Consensus 1313 TIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD 1389 (1445)
|++||+.+.. ..+.++..+ ...+.++.+||+........+||||||||++|||||+.+|+|||||||||+||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~-----~~~e~L~~~gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD 196 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERRE-----KALDALRQVGLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALD 196 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCC
Confidence 9999997432 112222111 12233344466555566667899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1390 AQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1390 ~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+.+.+.+++.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+|++.
T Consensus 197 ~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l 252 (400)
T PRK10070 197 PLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEI 252 (400)
T ss_pred HHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHH
Confidence 999999999998764 48999999999998865 899999999999999988653
No 293
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-37 Score=356.62 Aligned_cols=213 Identities=24% Similarity=0.340 Sum_probs=182.5
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCCC--CChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIIN--TPVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~--i~~~ 1294 (1445)
.+.+++.+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.|+.. .+..
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4889999999964 4699999999999999999999999999999999999986 79999999999864 3445
Q ss_pred hhhcceEEEcCCCcccCccHHHhcCCCCC------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEGSLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1368 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~gTIReNLdp~~~------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1368 (1445)
.+|++++|+||+|.+|..|++||+.+... ..++++.++++.+++.+.+. ...++...+||+|||||++|
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-----~~~~~~~~~LS~G~~qrv~l 160 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVK-----DKLKVSGLSLSGGQQQRLCI 160 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhh-----hhhhCCcccCCHHHHHHHHH
Confidence 67889999999999999999999975421 11235566666666544332 23445667899999999999
Q ss_pred HHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEe--------CCeEeeecCC
Q 000522 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILD--------HGHLPHCGCA 1439 (1445)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~--------~G~vvE~G~p 1439 (1445)
|||++++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.+ ||||++|+ +|++++.|++
T Consensus 161 aral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 161 ARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 99999999999999999999999999999999988778999999999998875 89999996 8999999997
Q ss_pred CC
Q 000522 1440 AA 1441 (1445)
Q Consensus 1440 ~~ 1441 (1445)
++
T Consensus 241 ~~ 242 (261)
T PRK14263 241 AQ 242 (261)
T ss_pred HH
Confidence 64
No 294
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-38 Score=361.81 Aligned_cols=215 Identities=25% Similarity=0.338 Sum_probs=179.1
Q ss_pred CccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-----CCCcEEEECCeeCCCC--C
Q 000522 1220 QGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-----ICGGQILVDGLNIINT--P 1292 (1445)
Q Consensus 1220 ~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-----~~~G~I~IDG~di~~i--~ 1292 (1445)
...|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +
T Consensus 37 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 37 KPHVVAKNFSIYYGE--FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred ceEEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 346899999999964 369999999999999999999999999999999999865 4999999999998643 3
Q ss_pred hHhhhcceEEEcCCCcccCccHHHhcCCCC---CC-C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHH
Q 000522 1293 VRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MN-D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQ 1364 (1445)
Q Consensus 1293 ~~~lR~~i~~VpQdp~lF~gTIReNLdp~~---~~-s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQ 1364 (1445)
...+|++++|+||+|.+|++|++||+.+.. .. + ++++.++++..++.+.+ ..........|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-----~~~~~~~~~~LSgGq~q 189 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEV-----SDRLDKNALGLSGGQQQ 189 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccch-----hhHhhCChhhCCHHHHH
Confidence 346788999999999999899999997431 11 1 12234444444432211 22334556689999999
Q ss_pred HHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|++|||||+++|++|||||||++||.++.+.+.+.|++..+++|||+++|+++.+.+ ||+|++|++|++++.|+|.+
T Consensus 190 rv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 190 RLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 999999999999999999999999999999999999887667899999999999875 89999999999999998754
No 295
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=8.8e-38 Score=350.47 Aligned_cols=212 Identities=27% Similarity=0.363 Sum_probs=173.0
Q ss_pred EEEEEEEEEeCCC--CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC---CCCcEEEECCeeCCCCChHhhh
Q 000522 1223 IEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDLR 1297 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~lR 1297 (1445)
++|+||+++|+.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5799999999765 3689999999999999999999999999999999999999 99999999999875 34678
Q ss_pred cceEEEcCCCcccCc-cHHHhcCCCCC-CChHHHHHHHHHccHHH-HHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000522 1298 GRFAVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKE-EVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1445)
Q Consensus 1298 ~~i~~VpQdp~lF~g-TIReNLdp~~~-~sd~ei~~aL~~~~l~~-~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1445)
++++++||++.+|++ |++||+.+... .......+..+.....+ .++.++++........+||+|||||++||||+++
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 160 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNLVKGISGGERRRVSIAVQLLW 160 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhcccccCcCHHHHHHHHHHHHHHh
Confidence 899999999999987 99999974311 00000001111111122 3333466555555667899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccCh-hHH-hhcCEEEEEeCCeEeeec
Q 000522 1375 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRI-STV-LNMDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl-~ti-~~~DrI~Vl~~G~vvE~G 1437 (1445)
+|+||||||||++||+.+.+.+.+.|++.. +++|+|+++|++ +.+ ..||+|++|++|++++.|
T Consensus 161 ~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 161 DPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999998764 478999999998 355 568999999999999876
No 296
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=5.6e-38 Score=362.27 Aligned_cols=210 Identities=29% Similarity=0.471 Sum_probs=183.2
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++||+.+|+. ...+|+||||+|++||.+|++||||||||||+++|.|+++|++|+|.++|.|...- ....|+++|
T Consensus 4 ~i~~~~l~k~~~~-~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGG-DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCC-CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 4788999999973 24699999999999999999999999999999999999999999999999998765 778899999
Q ss_pred EEcCCCcccCc-cHHHhcCCCCC-------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000522 1302 VVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1445)
Q Consensus 1302 ~VpQdp~lF~g-TIReNLdp~~~-------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1445)
|+||+|.+++. |++|||+++.. ..++++.+.++..+|.+ .-......||+|||||+.||+||+
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~---------~~~~~~~~lS~G~kqrl~ia~aL~ 152 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLED---------KANKKVRTLSGGMKQRLSIALALL 152 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCch---------hhCcchhhcCHHHHHHHHHHHHHh
Confidence 99999998876 99999986532 12345666666665543 123334469999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhCC-C-cEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1374 KSSKVLCLDECTANVDAQTASILQNAISSECK-G-MTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~-~-~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
.+|++|||||||++||+.+...+.+.|++..+ + +||++.||.++.+.. ||||++|++|+++.+|+++++
T Consensus 153 ~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l 224 (293)
T COG1131 153 HDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEEL 224 (293)
T ss_pred cCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 99999999999999999999999999998865 4 799999999999988 999999999999999987654
No 297
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.1e-37 Score=348.89 Aligned_cols=212 Identities=29% Similarity=0.449 Sum_probs=185.2
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|+++.|.... .++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 1 i~~~~l~~~~~~~~----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (237)
T cd03252 1 ITFEHVRFRYKPDG----PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRR 76 (237)
T ss_pred CEEEEEEEecCCCC----ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhh
Confidence 35789999985321 2359999999999999999999999999999999999999999999876
Q ss_pred eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccC
Q 000522 673 SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 751 (1445)
Q Consensus 673 ~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~ 751 (1445)
.++|++|++++++.|++||+.++.. ...+...+.++..++.+.++.+|.|.++..+..+.+|||||||||+||||++.+
T Consensus 77 ~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~ 156 (237)
T cd03252 77 QVGVVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHN 156 (237)
T ss_pred cEEEEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhC
Confidence 3899999999999999999988643 334445556666778777888998888888899999999999999999999999
Q ss_pred CCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHhc
Q 000522 752 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 823 (1445)
Q Consensus 752 ~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~~ 823 (1445)
|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 157 p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (237)
T cd03252 157 PRILIFDEATSALDYESEHAIMRN-MHD-ICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE 226 (237)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc
Confidence 999999999999999999988876 433 3457899999999999988999999999999999999887654
No 298
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-37 Score=356.71 Aligned_cols=213 Identities=23% Similarity=0.290 Sum_probs=180.9
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC--------CcEEEECCeeCCCCChH
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC--------GGQILVDGLNIINTPVR 1294 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~--------~G~I~IDG~di~~i~~~ 1294 (1445)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRH--RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECC--EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 789999999964 36999999999999999999999999999999999999998 99999999999888888
Q ss_pred hhhcceEEEcCCCc-ccCccHHHhcCCCCC-C----C--hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHH
Q 000522 1295 DLRGRFAVVPQSPF-LFEGSLRDNLDPFHM-N----D--DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~-lF~gTIReNLdp~~~-~----s--d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl 1366 (1445)
.+|+.++++||++. +|..|++||+..... . . ..+. .....+.++.+|+++..+.....||||||||+
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv 154 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRD-----GEIAWQALALAGATALVGRDVTTLSGGELARV 154 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHH-----HHHHHHHHHHcCcHhhhcCCcccCCHHHHHHH
Confidence 88889999999986 578899999965321 0 0 0110 01123334444666667777788999999999
Q ss_pred HHHHHhc---------cCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHh-hcCEEEEEeCCeEe
Q 000522 1367 CLARALL---------KSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLP 1434 (1445)
Q Consensus 1367 ~LARALL---------r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vv 1434 (1445)
+|||||+ .+|++|||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+. .||+|++|++|+++
T Consensus 155 ~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~ 234 (272)
T PRK13547 155 QFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIV 234 (272)
T ss_pred HHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEE
Confidence 9999999 59999999999999999999999999987643 789999999999986 48999999999999
Q ss_pred eecCCCCC
Q 000522 1435 HCGCAAAP 1442 (1445)
Q Consensus 1435 E~G~p~~~ 1442 (1445)
+.|++++.
T Consensus 235 ~~g~~~~~ 242 (272)
T PRK13547 235 AHGAPADV 242 (272)
T ss_pred EecCHHHH
Confidence 99987653
No 299
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2e-37 Score=344.37 Aligned_cols=201 Identities=21% Similarity=0.354 Sum_probs=171.2
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++||+++|+. .++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+.+.+ ..|++++|
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999962 568999999999999999999999999999999999999999999999987644 46788999
Q ss_pred EcCCCcccCc-cHHHhcCCC-CC-C-----ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000522 1303 VPQSPFLFEG-SLRDNLDPF-HM-N-----DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1445)
Q Consensus 1303 VpQdp~lF~g-TIReNLdp~-~~-~-----sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1445)
+||+|.+|.+ |+++|+... .. . .++++.++++..+ ++........+||+|||||++||||+++
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~---------l~~~~~~~~~~LS~G~~qrl~laral~~ 145 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVG---------IADYLDRLPEQLSGGQRQRVALARCLVR 145 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcC---------cHHHhhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999975 999998632 11 1 1223444455444 4444444556899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecC
Q 000522 1375 SSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGC 1438 (1445)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~ 1438 (1445)
+|+|++|||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.+ ||+|++|++|++++.|.
T Consensus 146 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 146 PNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999998864 37899999999999875 89999999999999875
No 300
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-37 Score=353.19 Aligned_cols=206 Identities=27% Similarity=0.339 Sum_probs=172.5
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +.+++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 789999999964 4699999999999999999999999999999999999999999999999998642 346899
Q ss_pred EcCCCcccC-ccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1303 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1303 VpQdp~lF~-gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
+||++.+|+ .|+++|+.... .....+.. ....+.++.+|++........+||||||||++||||++++|++
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~gl~~~~~~~~~~LSgGq~qrl~laral~~~p~l 149 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRL-----EIAHQMLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQL 149 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHH-----HHHHHHHHHcCChhHhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999887 59999996431 11211111 1123334444665555566678999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEe--CCeEeeecCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILD--HGHLPHCGCAA 1440 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~--~G~vvE~G~p~ 1440 (1445)
|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|+ +|++++.+++.
T Consensus 150 llLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~~ 216 (255)
T PRK11248 150 LLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPLN 216 (255)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecCC
Confidence 99999999999999999999998763 48999999999999865 89999998 59999988653
No 301
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=355.95 Aligned_cols=213 Identities=26% Similarity=0.404 Sum_probs=177.1
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC-----CcEEEECCeeCCC--CChH
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIIN--TPVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~--i~~~ 1294 (1445)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 4789999999963 46999999999999999999999999999999999999874 8999999999875 3455
Q ss_pred hhhcceEEEcCCCcccCc-cHHHhcCCCC---C-CChHHHH----HHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH---M-NDDLKIW----SVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~g-TIReNLdp~~---~-~sd~ei~----~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1365 (1445)
.+|++++|+||+|.+|.+ |+++|+.... . ..+++.. +.++..++++. +.........+||||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----l~~~~~~~~~~LS~G~~qr 156 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDE-----VKDRLKTPATGLSGGQQQR 156 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchh-----hhhhhcCCcccCCHHHHHH
Confidence 778899999999999985 9999996321 1 1222222 22333333221 1222334456899999999
Q ss_pred HHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
++||||++++|+||||||||++||..+.+.+.+.|++..+++|+|++||+++.+.+ ||||++|++|++++.|+|++
T Consensus 157 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14272 157 LCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQ 233 (252)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999987668999999999999986 89999999999999998764
No 302
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-37 Score=356.60 Aligned_cols=215 Identities=26% Similarity=0.364 Sum_probs=181.6
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC-----CcEEEECCeeCCC--CCh
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC-----GGQILVDGLNIIN--TPV 1293 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~-----~G~I~IDG~di~~--i~~ 1293 (1445)
+.|+++|++++|+. +.+|+|+||+|++||.+||+|++|||||||+++|.|+++|+ +|+|.+||.|++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 46999999999964 36999999999999999999999999999999999999985 8999999999853 345
Q ss_pred HhhhcceEEEcCCCcccCccHHHhcCCCC----CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHH
Q 000522 1294 RDLRGRFAVVPQSPFLFEGSLRDNLDPFH----MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQL 1365 (1445)
Q Consensus 1294 ~~lR~~i~~VpQdp~lF~gTIReNLdp~~----~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQr 1365 (1445)
..+|+.++++||++.+|+.|++||+.+.. ..+ ++++.++++.+++.+++ +...+.....||+|||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~~~~~LSgGq~qr 158 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEI-----KHKIHKSALDLSGGQQQR 158 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchh-----hhHhcCCcccCCHHHHHH
Confidence 67889999999999999999999996421 112 12344555555554332 223455667899999999
Q ss_pred HHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeC-----CeEeeec
Q 000522 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDH-----GHLPHCG 1437 (1445)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~-----G~vvE~G 1437 (1445)
++||||++++|+||||||||++||.++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |++++.|
T Consensus 159 v~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 238 (261)
T PRK14258 159 LCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVEFG 238 (261)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEEeC
Confidence 999999999999999999999999999999999998742 48999999999999875 799999999 9999999
Q ss_pred CCCCC
Q 000522 1438 CAAAP 1442 (1445)
Q Consensus 1438 ~p~~~ 1442 (1445)
+|++.
T Consensus 239 ~~~~~ 243 (261)
T PRK14258 239 LTKKI 243 (261)
T ss_pred CHHHH
Confidence 98653
No 303
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-38 Score=360.33 Aligned_cols=203 Identities=28% Similarity=0.399 Sum_probs=174.8
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1445)
..++++|++-.|.. ..+++|+||+|++||++++.|||||||||+|++|.|+..|++|+|.++|
T Consensus 4 ~~l~i~~v~k~yg~------~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR 77 (352)
T COG3842 4 PALEIRNVSKSFGD------FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKR 77 (352)
T ss_pred ceEEEEeeeeecCC------eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhc
Confidence 46899999988862 2359999999999999999999999999999999999999999999987
Q ss_pred eEEEEcCCCCCCCc-cHHHHHhcCCCC----C-h---hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHH
Q 000522 673 SIAYVPQVPWILSG-TIRDNILFGKNY----D-P---QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1445)
Q Consensus 673 ~i~y~~Q~p~l~~~-ti~~nI~~g~~~----~-~---~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~ 743 (1445)
.|++|+|+.-||+- ||+|||.||... . + +++.++++..+|..-. ..+...||||||||||
T Consensus 78 ~ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~-----------~R~p~qLSGGQqQRVA 146 (352)
T COG3842 78 PIGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFA-----------DRKPHQLSGGQQQRVA 146 (352)
T ss_pred ccceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhh-----------hhChhhhChHHHHHHH
Confidence 59999999999965 999999999662 2 2 3677777777776533 3456799999999999
Q ss_pred HHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchh-hhhCCEEEEEeCCEEEEecCHhHHHh
Q 000522 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQA-ISAADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 744 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~-l~~~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
|||||..+|+++|||||+||||.+..+++-..+.......|.|.|+|||+.+. +..+|+|++|++|+|...|+++|+..
T Consensus 147 LARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~ 226 (352)
T COG3842 147 LARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYE 226 (352)
T ss_pred HHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhh
Confidence 99999999999999999999999998887776433323347899999999876 66799999999999999999999965
Q ss_pred c
Q 000522 823 S 823 (1445)
Q Consensus 823 ~ 823 (1445)
.
T Consensus 227 ~ 227 (352)
T COG3842 227 R 227 (352)
T ss_pred C
Confidence 4
No 304
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-37 Score=347.78 Aligned_cols=204 Identities=23% Similarity=0.379 Sum_probs=173.7
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++||+++|+.. ..|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .+++++|
T Consensus 2 l~~~~l~~~~~~~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHHL----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECCc----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 7899999999632 249999999999999999999999999999999999999999999999887654 3678999
Q ss_pred EcCCCcccCc-cHHHhcCCCC-CC------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000522 1303 VPQSPFLFEG-SLRDNLDPFH-MN------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1445)
Q Consensus 1303 VpQdp~lF~g-TIReNLdp~~-~~------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1445)
+||+|.+|.+ |+++|+.... .. .++++.++++.++ ++..+......||+|||||++||||+++
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~---------l~~~~~~~~~~LS~G~~qrv~laral~~ 146 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMG---------IEDLLARLPGQLSGGQRQRVALARCLVR 146 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcC---------cHHHHhCCcccCCHHHHHHHHHHHHHhc
Confidence 9999999986 9999997421 11 1233444555554 4444455556799999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1375 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+|+++||||||++||.++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 147 ~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~ 216 (232)
T PRK10771 147 EQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDE 216 (232)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999987643 7899999999999876 89999999999999998764
No 305
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.1e-37 Score=353.92 Aligned_cols=212 Identities=20% Similarity=0.282 Sum_probs=174.5
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCC--CCCCcEEEECCeeCCCCChHhh-hcc
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDL-RGR 1299 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~l-R~~ 1299 (1445)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++...+.... |..
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 478999999963 46999999999999999999999999999999999994 7999999999999988877664 456
Q ss_pred eEEEcCCCcccCc-cHHHhcCCCCC----------CChHHHHHHHHHccHHHHHHhCCCchh-hhcCCC-CCChhHHHHH
Q 000522 1300 FAVVPQSPFLFEG-SLRDNLDPFHM----------NDDLKIWSVLEKCHVKEEVEAVGLETF-VKESGI-SFSVGQRQLI 1366 (1445)
Q Consensus 1300 i~~VpQdp~lF~g-TIReNLdp~~~----------~sd~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~-~LSgGQrQrl 1366 (1445)
++++||+|.+|++ |+++|+..... .+.++.. + .+.+.++.+|++.. ...... .||+|||||+
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrl 153 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFL---K--LLKAKLALLGMDEEFLNRSVNEGFSGGEKKRN 153 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHH---H--HHHHHHHHcCCchhhcccccccCcCHHHHHHH
Confidence 9999999999987 89999853210 0111111 1 12333444466533 233333 4999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh--cCEEEEEeCCeEeeecCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN--MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~--~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+||||++++|++|||||||++||..+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+|++
T Consensus 154 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (243)
T TIGR01978 154 EILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVEL 231 (243)
T ss_pred HHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHHH
Confidence 99999999999999999999999999999999998764 47899999999999986 79999999999999998864
No 306
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.5e-37 Score=347.00 Aligned_cols=206 Identities=25% Similarity=0.346 Sum_probs=175.6
Q ss_pred EEEEEEEEEeCCCC--CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChH---hhh
Q 000522 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DLR 1297 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~lR 1297 (1445)
++++|++++|+++. ..+|+|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999997532 5699999999999999999999999999999999999999999999999999877653 468
Q ss_pred cceEEEcCCCcccC-ccHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1298 GRFAVVPQSPFLFE-GSLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1298 ~~i~~VpQdp~lF~-gTIReNLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
+.++++||+|.+|. .|+.+|+.+.. ..+.++..+ ...+.++.+|++........+||+|||||++||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~lS~G~~qrv~laral 156 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARE-----RARAMLEAVGLGDHLDYYPHNLSGGQKQRVAIARAL 156 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHcCChhhhhcChhhCCHHHHHHHHHHHHH
Confidence 89999999999987 69999997532 122222211 123444555776666667778999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhhcCEEEEEeCCeE
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHL 1433 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~v 1433 (1445)
+++|++|+|||||++||+++.+.+.+.|++.. .++|+|+|+|+++....||+|++|++|++
T Consensus 157 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 157 VHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 99999999999999999999999999998765 37999999999998777999999999986
No 307
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.2e-37 Score=368.60 Aligned_cols=200 Identities=26% Similarity=0.341 Sum_probs=166.9
Q ss_pred ccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCe----eCCCCChHhhh----cceEEEcCCCcc
Q 000522 1238 AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL----NIINTPVRDLR----GRFAVVPQSPFL 1309 (1445)
Q Consensus 1238 ~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~----di~~i~~~~lR----~~i~~VpQdp~l 1309 (1445)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||. |+...+.+.+| ++++||||++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 5799999999999999999999999999999999999999999999996 67777665543 579999999999
Q ss_pred cC-ccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccc
Q 000522 1310 FE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1385 (1445)
Q Consensus 1310 F~-gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaT 1385 (1445)
|+ .|++||+.+.. ..+.++.. ....+.++.+||+........+||||||||++|||||+++|+||||||||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~-----~~a~e~le~vgL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlDEPt 192 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERR-----KRVDEQLELVGLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMDEPF 192 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 98 69999996432 11222111 11223333345555455556689999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCCC
Q 000522 1386 ANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1386 S~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|+||+.+.+.+++.|++..+ ++|+|+|||+++.+. .||||++|++|++++.|+|++.
T Consensus 193 s~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei 252 (382)
T TIGR03415 193 SALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEI 252 (382)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999987643 799999999999875 5899999999999999998754
No 308
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-37 Score=348.24 Aligned_cols=205 Identities=27% Similarity=0.430 Sum_probs=175.3
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+++|++++|+. .+|+|+||+|+|||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 l~~~~l~~~~~~---~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE---FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC---ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 478999999963 38999999999999999999999999999999999999999999999999987654 3789999
Q ss_pred EcCCCcccC-ccHHHhcCCCC---CCC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000522 1303 VPQSPFLFE-GSLRDNLDPFH---MND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1445)
Q Consensus 1303 VpQdp~lF~-gTIReNLdp~~---~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1445)
+||++.+|. .|++||+.... ..+ ++++.++++.+ |+...+.....+||+|||||++||||+++
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrl~laral~~ 146 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEML---------GIDHLLNRKPETLSGGEQQRVAIARALVV 146 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHc---------CChhHHhcCcccCCHHHHHHHHHHHHHHc
Confidence 999999986 69999996421 111 12333444444 44444555566899999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1375 SSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+|++++|||||++||..+.+.+.+.+++..+ ++|+|++||+++.+.+ ||+|++|++|++++.|++++
T Consensus 147 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 216 (235)
T cd03299 147 NPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEE 216 (235)
T ss_pred CCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 9999999999999999999999999988643 8999999999999876 89999999999999998754
No 309
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-37 Score=339.91 Aligned_cols=200 Identities=30% Similarity=0.398 Sum_probs=167.4
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
|.+++.+..|.. ..+++|||++|+.||++++.|||||||||||++|.|+..|++|.|.++|
T Consensus 3 i~i~~~~~~~~~------~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~ 76 (345)
T COG1118 3 IRINNVKKRFGA------FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRD 76 (345)
T ss_pred eeehhhhhhccc------ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhh
Confidence 556666666653 2348999999999999999999999999999999999999999999987
Q ss_pred -eEEEEcCCCCCCC-ccHHHHHhcCCCCC---------hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 -SIAYVPQVPWILS-GTIRDNILFGKNYD---------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 -~i~y~~Q~p~l~~-~ti~~nI~~g~~~~---------~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
+||||.|+.-+|. .||.|||.||.+.. ..+..+.++.|.|+.--+. ....||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~r-----------yP~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADR-----------YPAQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhc-----------CchhcChHHHHH
Confidence 5999999999885 59999999996322 2456677888888654333 446899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccC-CceEEEEccCchhhh-hCCEEEEEeCCEEEEecCHhH
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML-QKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSAD 819 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~-~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~~~~ 819 (1445)
||||||+...|++|||||||+|||+++.+.+-..+ ..-..+ |.|+|+||||.++.. .||+|++|++|+|...|+++|
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wL-r~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~e 224 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWL-RKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDE 224 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHH-HHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHH
Confidence 99999999999999999999999999888765542 221222 679999999998855 599999999999999999999
Q ss_pred HHhc
Q 000522 820 LAVS 823 (1445)
Q Consensus 820 ~~~~ 823 (1445)
+...
T Consensus 225 v~~~ 228 (345)
T COG1118 225 VYDH 228 (345)
T ss_pred HhcC
Confidence 9654
No 310
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.2e-37 Score=363.58 Aligned_cols=200 Identities=26% Similarity=0.375 Sum_probs=170.1
Q ss_pred EeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCccc
Q 000522 1231 RYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF 1310 (1445)
Q Consensus 1231 ~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF 1310 (1445)
+|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. ....+|++++|+||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 4642 469999999999999999999999999999999999999999999999999976 3456788999999999999
Q ss_pred Cc-cHHHhcCCCCC---CCh----HHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000522 1311 EG-SLRDNLDPFHM---NDD----LKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1445)
Q Consensus 1311 ~g-TIReNLdp~~~---~sd----~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1445)
.+ |++||+.+... .+. +++.++++. +|++........+||||||||++|||||+++|++|+||
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLD 149 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLEL---------FELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLD 149 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHH---------cCChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 86 99999965321 111 223333444 45544445555689999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1383 ECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1383 EaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||++||+.+.+.+.+.|++.. +++|||++||+++.+.+ ||+|++|++|++++.|+|++.
T Consensus 150 EPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l 211 (302)
T TIGR01188 150 EPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEEL 211 (302)
T ss_pred CCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999998764 47999999999999875 899999999999999988653
No 311
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=3.6e-37 Score=353.72 Aligned_cols=212 Identities=24% Similarity=0.356 Sum_probs=175.8
Q ss_pred cEEEEEEEEEeCC-------CCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChH
Q 000522 1222 LIEFQNVTMRYKP-------SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~-------~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~ 1294 (1445)
.|+++||+++|+. +..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 4899999999952 124699999999999999999999999999999999999999999999999999766666
Q ss_pred hhhcceEEEcCCCc--ccCc-cHHHhcCCC---C-CCC----hHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhH
Q 000522 1295 DLRGRFAVVPQSPF--LFEG-SLRDNLDPF---H-MND----DLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQ 1362 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~--lF~g-TIReNLdp~---~-~~s----d~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQ 1362 (1445)
..|++++|+||+|. +++. |+.+|+... + ... ++++.++++.+ |++. .......+||+||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~~LS~G~ 154 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQV---------GLLPDHASYYPHMLAPGQ 154 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHc---------CCChHHHhcCchhcCHHH
Confidence 66778999999985 4544 888887531 1 111 22344444444 4432 2233445799999
Q ss_pred HHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCC
Q 000522 1363 RQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCA 1439 (1445)
Q Consensus 1363 rQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p 1439 (1445)
|||++||||++++|+||||||||++||+++.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++
T Consensus 155 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 234 (267)
T PRK15112 155 KQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGST 234 (267)
T ss_pred HHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCH
Confidence 999999999999999999999999999999999999998864 37899999999999987 899999999999999987
Q ss_pred CCC
Q 000522 1440 AAP 1442 (1445)
Q Consensus 1440 ~~~ 1442 (1445)
++.
T Consensus 235 ~~~ 237 (267)
T PRK15112 235 ADV 237 (267)
T ss_pred HHH
Confidence 643
No 312
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-37 Score=365.72 Aligned_cols=214 Identities=20% Similarity=0.328 Sum_probs=174.5
Q ss_pred cEEEEEEEEEeCC--CCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC----CCCcEEEECCeeCCCCChHh
Q 000522 1222 LIEFQNVTMRYKP--SLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP----ICGGQILVDGLNIINTPVRD 1295 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~--~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~----~~~G~I~IDG~di~~i~~~~ 1295 (1445)
.++++|++++|+. +...+|+||||+|++||.+||+|+||||||||+++|.|+.+ |++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4899999999953 22469999999999999999999999999999999999986 58999999999999888766
Q ss_pred hh----cceEEEcCCCc--ccC-ccHHHhcCCC-------CC-CC-----hHHHHHHHHHccHHHHHHhCCCchhhhcCC
Q 000522 1296 LR----GRFAVVPQSPF--LFE-GSLRDNLDPF-------HM-ND-----DLKIWSVLEKCHVKEEVEAVGLETFVKESG 1355 (1445)
Q Consensus 1296 lR----~~i~~VpQdp~--lF~-gTIReNLdp~-------~~-~s-----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G 1355 (1445)
++ ++|++|||+|. +++ -||.+|+... .. .. ++++.++|+.++|.+. ........
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~------~~~~~~~p 156 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDH------KDAMRSFP 156 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCCh------HHHHhCCc
Confidence 53 47999999996 333 4888887420 00 01 1233344444433211 01235556
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCe
Q 000522 1356 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGH 1432 (1445)
Q Consensus 1356 ~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1432 (1445)
..||||||||++|||||+.+|+|||+||||++||+.+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+
T Consensus 157 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G~ 236 (330)
T PRK15093 157 YELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCGQ 236 (330)
T ss_pred hhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 68999999999999999999999999999999999999999999987643 7999999999999975 89999999999
Q ss_pred EeeecCCCC
Q 000522 1433 LPHCGCAAA 1441 (1445)
Q Consensus 1433 vvE~G~p~~ 1441 (1445)
|+|.|++++
T Consensus 237 ive~g~~~~ 245 (330)
T PRK15093 237 TVETAPSKE 245 (330)
T ss_pred EEEECCHHH
Confidence 999998754
No 313
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-37 Score=344.28 Aligned_cols=211 Identities=28% Similarity=0.440 Sum_probs=187.7
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|... .++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~-----~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 76 (229)
T cd03254 2 EIEFENVNFSYDEK-----KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLR 76 (229)
T ss_pred eEEEEEEEEecCCC-----CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHh
Confidence 47899999998531 2359999999999999999999999999999999999999999999875
Q ss_pred -eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHcc
Q 000522 673 -SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 750 (1445)
Q Consensus 673 -~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~ 750 (1445)
.++|++|+|+++++|++||+.++.+ ...++..+.++.+++...++.+|.|.++..+....+|||||||||+||||+++
T Consensus 77 ~~i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~ 156 (229)
T cd03254 77 SMIGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLR 156 (229)
T ss_pred hhEEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 3999999999999999999998754 34456677788889988899999999999999999999999999999999999
Q ss_pred CCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHh
Q 000522 751 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 751 ~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+.+.++.||++++|++|++.+.|+.+++..
T Consensus 157 ~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 157 DPKILILDEATSNIDTETEKLIQEA-LEK-LMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 9999999999999999999988876 433 345789999999999998899999999999999999887754
No 314
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-37 Score=350.41 Aligned_cols=215 Identities=28% Similarity=0.376 Sum_probs=179.0
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECC------eeCCCCChH
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDG------LNIINTPVR 1294 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG------~di~~i~~~ 1294 (1445)
..++++|++++|+. +++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.++| .|+.+.+..
T Consensus 9 ~~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 9 DVFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred hheeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 35999999999964 4699999999999999999999999999999999999999997666655 677777777
Q ss_pred hhhcceEEEcCCCcccCc-cHHHhcCCCC---CC-ChHHHHHHHHHccHHHHHHhCCCc----hhhhcCCCCCChhHHHH
Q 000522 1295 DLRGRFAVVPQSPFLFEG-SLRDNLDPFH---MN-DDLKIWSVLEKCHVKEEVEAVGLE----TFVKESGISFSVGQRQL 1365 (1445)
Q Consensus 1295 ~lR~~i~~VpQdp~lF~g-TIReNLdp~~---~~-sd~ei~~aL~~~~l~~~i~~lgLd----t~v~e~G~~LSgGQrQr 1365 (1445)
.+|++++|+||+|.+|.+ |+++|+.... .. .++++++. +.+.++.+|++ ...+..+..||+|||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qr 161 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKI-----VEECLRKVGLWKEVYDRLNSPASQLSGGQQQR 161 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHH-----HHHHHHHcCCCccchhhhcCCcccCCHHHHHH
Confidence 889999999999999986 9999997431 11 22232221 12222333443 23455667899999999
Q ss_pred HHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCCC
Q 000522 1366 ICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1366 l~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++||||++++|++++|||||++||..+.+.+.+.|++..+++|+|+|||+++.+. -||++++|++|++++.|++++.
T Consensus 162 l~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 162 LTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998777899999999999995 5899999999999999987653
No 315
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=3.4e-37 Score=353.93 Aligned_cols=219 Identities=21% Similarity=0.332 Sum_probs=182.1
Q ss_pred cEEEEEEEEEeCCC-------CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChH
Q 000522 1222 LIEFQNVTMRYKPS-------LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~-------~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~ 1294 (1445)
.|+++||+++|+.+ .+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++..++..
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38999999999741 35799999999999999999999999999999999999999999999999999887653
Q ss_pred ---hhhcceEEEcCCCc--cc-CccHHHhcCCC-CCCChHHHHHHHHHccHHHHHHhCCCch-hhhcCCCCCChhHHHHH
Q 000522 1295 ---DLRGRFAVVPQSPF--LF-EGSLRDNLDPF-HMNDDLKIWSVLEKCHVKEEVEAVGLET-FVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1295 ---~lR~~i~~VpQdp~--lF-~gTIReNLdp~-~~~sd~ei~~aL~~~~l~~~i~~lgLdt-~v~e~G~~LSgGQrQrl 1366 (1445)
.+|+.++|+||++. ++ ..|+++|+... ....+ +...-....+.+.++.+|+++ ..+.....||+|||||+
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~--~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~LS~Ge~qrl 160 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLS--LDKAERLARASEMLRAVDLDDSVLDKRPPQLSGGQLQRV 160 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhcc--CCHHHHHHHHHHHHHHcCCChhHhhCCCccCChHHHHHH
Confidence 46889999999983 44 36999997431 10000 001111223445566668864 56677788999999999
Q ss_pred HHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1367 ~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|||||+++|+||||||||++||.++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 239 (268)
T PRK10419 161 CLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDK 239 (268)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhc
Confidence 999999999999999999999999999999999987643 7899999999999985 899999999999999998875
No 316
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.2e-36 Score=347.77 Aligned_cols=214 Identities=27% Similarity=0.359 Sum_probs=190.8
Q ss_pred CceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------
Q 000522 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1445)
Q Consensus 603 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 672 (1445)
.+.++++|+++.|+.. . ..+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 17 ~~~i~~~~l~~~~~~~-~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~ 92 (257)
T cd03288 17 GGEIKIHDLCVRYENN-L---KPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHT 92 (257)
T ss_pred CceEEEEEEEEEeCCC-C---CcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHH
Confidence 4679999999999642 1 2359999999999999999999999999999999999999999999875
Q ss_pred ---eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHc
Q 000522 673 ---SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 749 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly 749 (1445)
.++||+|+|+++++|++||+........+.+.++++..++...++.+|.|.++.+++.+.+||||||||++||||++
T Consensus 93 ~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~ 172 (257)
T cd03288 93 LRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFV 172 (257)
T ss_pred HhhhEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHh
Confidence 48999999999999999999765444455677788888998889999999999999999999999999999999999
Q ss_pred cCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHh
Q 000522 750 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 750 ~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
++|++++|||||++||+++.+.+++. +.. +.+++|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 173 ~~p~llllDEPt~gLD~~~~~~l~~~-l~~-~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 243 (257)
T cd03288 173 RKSSILIMDEATASIDMATENILQKV-VMT-AFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLA 243 (257)
T ss_pred cCCCEEEEeCCccCCCHHHHHHHHHH-HHH-hcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999988877765 433 345789999999999998999999999999999999988764
No 317
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.6e-37 Score=353.34 Aligned_cols=214 Identities=25% Similarity=0.368 Sum_probs=178.5
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCeeCCCC-----Ch
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC---GGQILVDGLNIINT-----PV 1293 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~---~G~I~IDG~di~~i-----~~ 1293 (1445)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +.
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 5899999999963 46999999999999999999999999999999999999986 49999999998654 34
Q ss_pred HhhhcceEEEcCCCcccCc-cHHHhcCCCCCC-----------ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChh
Q 000522 1294 RDLRGRFAVVPQSPFLFEG-SLRDNLDPFHMN-----------DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVG 1361 (1445)
Q Consensus 1294 ~~lR~~i~~VpQdp~lF~g-TIReNLdp~~~~-----------sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgG 1361 (1445)
..+|++++|+||++.+|.+ |+++|+...... .+++. +....+.++.+|++.........||+|
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G 156 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQ-----KQRALQALTRVGMVHFAHQRVSTLSGG 156 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHH-----HHHHHHHHHHcCCHHHHhCCccccCHH
Confidence 5678899999999998875 999999643110 00110 111233444446655556667789999
Q ss_pred HHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecC
Q 000522 1362 QRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVL-NMDEILILDHGHLPHCGC 1438 (1445)
Q Consensus 1362 QrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~ 1438 (1445)
||||++||||++.+|++|||||||++||.++.+.+.+.|++.. .++|||+|||+++.+. .||+|++|++|++++.|+
T Consensus 157 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~ 236 (262)
T PRK09984 157 QQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGS 236 (262)
T ss_pred HHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998864 3799999999999865 589999999999999999
Q ss_pred CCCC
Q 000522 1439 AAAP 1442 (1445)
Q Consensus 1439 p~~~ 1442 (1445)
|++.
T Consensus 237 ~~~~ 240 (262)
T PRK09984 237 SQQF 240 (262)
T ss_pred HHHh
Confidence 8765
No 318
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-37 Score=328.24 Aligned_cols=171 Identities=44% Similarity=0.760 Sum_probs=162.0
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++|++++|+...+++++|+||+|++||.++|+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 47899999997543469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000522 1303 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1445)
Q Consensus 1303 VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1445)
+||+|.+|++|++||+ ||+|||||++||||++++|++|+||
T Consensus 81 ~~~~~~~~~~t~~e~l---------------------------------------LS~G~~~rl~la~al~~~p~llllD 121 (171)
T cd03228 81 VPQDPFLFSGTIRENI---------------------------------------LSGGQRQRIAIARALLRDPPILILD 121 (171)
T ss_pred EcCCchhccchHHHHh---------------------------------------hCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 9999999999999997 9999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCe
Q 000522 1383 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGH 1432 (1445)
Q Consensus 1383 EaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1432 (1445)
|||++||+.+.+.+.+.|++..+++|+|+++|+++.+..||++++|++|+
T Consensus 122 EP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 122 EATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred CCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 99999999999999999988767899999999999999999999999985
No 319
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.8e-37 Score=327.32 Aligned_cols=207 Identities=28% Similarity=0.357 Sum_probs=172.9
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|.++.|.... ....+|+||||++.+||..+|+|+||||||||+++|+|..+|++|+|.++|
T Consensus 3 ~l~v~nl~~~y~~~~--~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~ 80 (252)
T COG1124 3 LLSVRNLSIVYGGGK--FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAF 80 (252)
T ss_pred eEEEeceEEEecCCc--chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhh
Confidence 478899999987542 123579999999999999999999999999999999999999999999987
Q ss_pred --eEEEEcCCCC--CC-CccHHHHHhcCC-----CCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000522 673 --SIAYVPQVPW--IL-SGTIRDNILFGK-----NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1445)
Q Consensus 673 --~i~y~~Q~p~--l~-~~ti~~nI~~g~-----~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv 742 (1445)
.|-+|+|+|. +- .-||++-|.=+. +-.+++..++++..+|..... ......|||||||||
T Consensus 81 ~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l----------~R~P~eLSGGQ~QRi 150 (252)
T COG1124 81 YRPVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFL----------DRRPHELSGGQRQRI 150 (252)
T ss_pred ccceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHH----------hcCchhcChhHHHHH
Confidence 3899999997 22 348888885322 222455778888888876532 344568999999999
Q ss_pred HHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHH
Q 000522 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1445)
Q Consensus 743 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~ 821 (1445)
||||||..+|+++|||||||+||+.+...|++-+..-...++-|.|+|||++..+.+ ||||++|++|++++.++.+++.
T Consensus 151 aIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~ 230 (252)
T COG1124 151 AIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELL 230 (252)
T ss_pred HHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhh
Confidence 999999999999999999999999999999986443323456699999999999987 9999999999999999988876
Q ss_pred hc
Q 000522 822 VS 823 (1445)
Q Consensus 822 ~~ 823 (1445)
..
T Consensus 231 ~~ 232 (252)
T COG1124 231 SH 232 (252)
T ss_pred cC
Confidence 43
No 320
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-37 Score=339.86 Aligned_cols=203 Identities=30% Similarity=0.409 Sum_probs=175.8
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.+.++|.+|.|++. .++|+|+||++++|+.++|+|+||||||||++.+.|.++|++|.|.++|
T Consensus 3 ~i~~~~l~~~y~~~-----~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~ 77 (235)
T COG1122 3 MIEAENLSFRYPGR-----KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLEL 77 (235)
T ss_pred eEEEEEEEEEcCCC-----ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHh
Confidence 47889999999754 3459999999999999999999999999999999999999999998866
Q ss_pred --eEEEEcCCC--CCCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 --SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 --~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
+||||.|+| .++..||.|.|.||.. .++ ++.+++++.|++.+..+.. ..+||||||||
T Consensus 78 ~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----------p~~LSGGqkqR 146 (235)
T COG1122 78 RQKVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRP-----------PFNLSGGQKQR 146 (235)
T ss_pred hcceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCC-----------ccccCCcceee
Confidence 399999999 6899999999999853 233 4677888888887664433 45899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHH
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~ 820 (1445)
||||.+|..+|++++||||||+||+...+.+++.+..-....++|+|++||+++.+.. ||++++|++|+++.+|++.++
T Consensus 147 vaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i 226 (235)
T COG1122 147 VAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEI 226 (235)
T ss_pred HHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHH
Confidence 9999999999999999999999999999999886332212336899999999999877 999999999999999999887
Q ss_pred Hhc
Q 000522 821 AVS 823 (1445)
Q Consensus 821 ~~~ 823 (1445)
.+.
T Consensus 227 ~~~ 229 (235)
T COG1122 227 FND 229 (235)
T ss_pred hhh
Confidence 653
No 321
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.2e-38 Score=321.28 Aligned_cols=213 Identities=26% Similarity=0.410 Sum_probs=182.6
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
+++.+++.+|++ ...+++||||+++.||.+||.|++||||||+++.|..++.|++|+|+|||.|+..-| ...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~p-~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRDP-SFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccCh-HHHhhhcce
Confidence 678999999976 335899999999999999999999999999999999999999999999999997755 567999999
Q ss_pred EcCCCcccCc-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1303 VPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1303 VpQdp~lF~g-TIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
++-+.-++.. |.||||.+|+. .++.++. +.+.+..+.++++..+..+-.+||.|+|||++|||||+++|+|
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~k-----ari~~l~k~l~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i 154 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIK-----ARIAELSKRLQLLEYLDRRVGEFSTGMKQKVAIARALVHDPSI 154 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHH-----HHHHHHHHHhChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCe
Confidence 9977777765 99999988753 2333332 2233344444555555555557999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhCC-CcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~~-~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++||||||+||..+.+.+++.|++... +++||+-||-++.++ -||||+++++|+++..|+++++
T Consensus 155 ~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l 220 (245)
T COG4555 155 LVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEAL 220 (245)
T ss_pred EEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHH
Confidence 999999999999999999999987754 999999999999998 6999999999999999998754
No 322
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.2e-36 Score=340.38 Aligned_cols=206 Identities=32% Similarity=0.443 Sum_probs=184.7
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|+... +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 77 (221)
T cd03244 2 DIEFKNVSLRYRPNL----PPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLR 77 (221)
T ss_pred cEEEEEEEEecCCCC----cccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHh
Confidence 378999999996321 2469999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccC
Q 000522 673 -SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHG 751 (1445)
Q Consensus 673 -~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~ 751 (1445)
.++|++|+|.++++|++|||.+......++..+.++..++.+.+..+|.|.++..++.+.+||||||||++||||++.+
T Consensus 78 ~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~ 157 (221)
T cd03244 78 SRISIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRK 157 (221)
T ss_pred hhEEEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcC
Confidence 4899999999999999999987666666677788888999988999999999999999999999999999999999999
Q ss_pred CCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecC
Q 000522 752 SDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 816 (1445)
Q Consensus 752 ~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~ 816 (1445)
|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+.+.+..||++++|++|++++.|+
T Consensus 158 p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 158 SKILVLDEATASVDPETDALIQKT-IRE-AFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 999999999999999998888776 433 345689999999999998999999999999988765
No 323
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-36 Score=343.17 Aligned_cols=211 Identities=31% Similarity=0.484 Sum_probs=186.6
Q ss_pred EEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------e
Q 000522 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 673 (1445)
Q Consensus 607 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~ 673 (1445)
+++|+++.|.... .++++|+||++++|++++|+||||||||||+++|.|+++|++|+|.++| .
T Consensus 2 ~~~~l~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 77 (234)
T cd03251 2 EFKNVTFRYPGDG----PPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQ 77 (234)
T ss_pred EEEEEEEEeCCCC----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhh
Confidence 5788899885321 2359999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCC
Q 000522 674 IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 752 (1445)
Q Consensus 674 i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~ 752 (1445)
++|++|+|++++.|++||+.++.. ..++.+.+.++.+.+.+.++.+|.|.++..+....+||||||||++||||++.+|
T Consensus 78 i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 157 (234)
T cd03251 78 IGLVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDP 157 (234)
T ss_pred EEEeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 899999999999999999998753 3455667777888888889999988888899999999999999999999999999
Q ss_pred CEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHhc
Q 000522 753 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAVS 823 (1445)
Q Consensus 753 ~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~~ 823 (1445)
++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 158 ~lllLDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (234)
T cd03251 158 PILILDEATSALDTESERLVQAA-LER-LMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ 226 (234)
T ss_pred CEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc
Confidence 99999999999999999988776 433 3457899999999999988999999999999999998887644
No 324
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=8e-37 Score=342.10 Aligned_cols=204 Identities=30% Similarity=0.394 Sum_probs=174.0
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ++.+++
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEEE
Confidence 478999999964 46999999999999999999999999999999999999999999999999875422 357999
Q ss_pred EcCCCcccC-ccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1303 VPQSPFLFE-GSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1303 VpQdp~lF~-gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
+||++.+|. .|+++|+.+.. ..+++++.++++..++ +........+||+|||||++||||++++|++
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l---------~~~~~~~~~~LS~G~~~rv~laral~~~p~l 145 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDL---------TNTGKKKAKQFSLGMKQRLGIAIALLNHPKL 145 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCC---------cHHHhhhHhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999998886 59999986421 2234455555555544 4334444567999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|+|||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+|.+
T Consensus 146 lllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 146 LILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred EEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 99999999999999999999998764 47899999999999864 89999999999999998865
No 325
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-37 Score=325.38 Aligned_cols=202 Identities=25% Similarity=0.385 Sum_probs=170.2
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1445)
..++++|++-.|+.. ..+|+||||+|++||+++|+|+|||||||||++|.|..+|++|+|.++|
T Consensus 2 ~~i~~~nl~k~yp~~-----~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~l 76 (258)
T COG3638 2 MMIEVKNLSKTYPGG-----HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKEL 76 (258)
T ss_pred ceEEEeeeeeecCCC-----ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHH
Confidence 358899999999743 3459999999999999999999999999999999999999999999886
Q ss_pred -----eEEEEcCCCCCCCc-cHHHHHhcCCC------------CChhhHHHHH---HHhcchHHHhhccCCCcccccCCC
Q 000522 673 -----SIAYVPQVPWILSG-TIRDNILFGKN------------YDPQSYSETL---KACTLDVDISLMVGGDMAYIGEKG 731 (1445)
Q Consensus 673 -----~i~y~~Q~p~l~~~-ti~~nI~~g~~------------~~~~~~~~v~---~~~~l~~d~~~~~~gd~t~vg~~g 731 (1445)
+|||++|++.|.+. ||.+|++.|+- +.++....++ +..++.+. .-.+.
T Consensus 77 r~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~-----------A~qra 145 (258)
T COG3638 77 RKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDK-----------AYQRA 145 (258)
T ss_pred HHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHH-----------HHHHh
Confidence 59999999998865 99999998743 2333333333 33333322 23466
Q ss_pred CccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhh-hCCEEEEEeCCE
Q 000522 732 VNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQ 810 (1445)
Q Consensus 732 ~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~~d~i~~l~~G~ 810 (1445)
.+|||||+|||+|||||+++|+|+|-|||+|+|||.+++++++.+..-....|.|+|+.-|++++.. +||||+-|++|+
T Consensus 146 ~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ 225 (258)
T COG3638 146 STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGR 225 (258)
T ss_pred ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCc
Confidence 7999999999999999999999999999999999999999999744333456889999999999866 599999999999
Q ss_pred EEEecCHhHHH
Q 000522 811 VKWIGSSADLA 821 (1445)
Q Consensus 811 i~~~g~~~~~~ 821 (1445)
|+..|+.+|+.
T Consensus 226 ivfDg~~~el~ 236 (258)
T COG3638 226 IVFDGPASELT 236 (258)
T ss_pred EEEeCChhhhh
Confidence 99999998864
No 326
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-37 Score=329.31 Aligned_cols=172 Identities=33% Similarity=0.510 Sum_probs=159.3
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCC--hHhhhcce
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP--VRDLRGRF 1300 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~--~~~lR~~i 1300 (1445)
|+++|++++|+. .++++|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ....|+.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999964 46999999999999999999999999999999999999999999999999998876 56788999
Q ss_pred EEEcCCCcccCc-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1445)
+|+||+|.+|.+ |+++|+... ||+|||||++||||++++|+++
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~------------------------------------lS~G~~qr~~la~al~~~p~ll 122 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG------------------------------------LSGGQQQRVALARALAMDPDVL 122 (178)
T ss_pred EEEecCCccCCCCCHHHheeec------------------------------------CCHHHHHHHHHHHHHHCCCCEE
Confidence 999999998865 999998643 9999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCe
Q 000522 1380 CLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGH 1432 (1445)
Q Consensus 1380 lLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1432 (1445)
+|||||++||+.+.+.+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 123 ilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 123 LLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 99999999999999999999987654 6899999999999985 89999999985
No 327
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.2e-37 Score=323.94 Aligned_cols=216 Identities=27% Similarity=0.405 Sum_probs=182.8
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhh-hcce
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1300 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1300 (1445)
-++++|++..|.+ -.+|+||||++++||.++++||||+||||++++|+|+.++.+|+|.++|.||...+++.. |..|
T Consensus 3 mL~v~~l~~~YG~--~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGK--IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccc--eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 3789999999976 369999999999999999999999999999999999999999999999999999988765 6679
Q ss_pred EEEcCCCcccCc-cHHHhcCCCCCC-ChHHHHHHHHHccHHHHHHhC-CCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFHMN-DDLKIWSVLEKCHVKEEVEAV-GLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~~~-sd~ei~~aL~~~~l~~~i~~l-gLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
+||||..-+|+. ||+|||..+... .+++-++. .+++..+-+ -|....+..+.+|||||+|.++|||||+.+||
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~----~~e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~Pk 156 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQER----DLEEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRPK 156 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccccccccc----cHHHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCCC
Confidence 999999999986 999999754321 11111110 011222222 45566677788999999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCCCC
Q 000522 1378 VLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAAPN 1443 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~~~ 1443 (1445)
+|+|||||.+|-+.--+.|.++|++..+ +.||+.|-++..... -+||.+||++|+|+.+|+++++.
T Consensus 157 lLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~ 225 (237)
T COG0410 157 LLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELL 225 (237)
T ss_pred EEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHh
Confidence 9999999999999999999999988764 569999999999766 57999999999999999998874
No 328
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-37 Score=327.61 Aligned_cols=170 Identities=32% Similarity=0.556 Sum_probs=157.6
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++|++++|+. .++|+|+||++++||.++|+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGK--KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECC--eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 478999999964 36999999999999999999999999999999999999999999999999998766 677889999
Q ss_pred EcCCCcccCc-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000522 1303 VPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1381 (1445)
Q Consensus 1303 VpQdp~lF~g-TIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1381 (1445)
+||+|.+|.+ |+++|+. ||+|||||++||||++++|+|++|
T Consensus 78 ~~q~~~~~~~~tv~~~~~--------------------------------------LS~G~~qrv~laral~~~p~illl 119 (173)
T cd03230 78 LPEEPSLYENLTVRENLK--------------------------------------LSGGMKQRLALAQALLHDPELLIL 119 (173)
T ss_pred EecCCccccCCcHHHHhh--------------------------------------cCHHHHHHHHHHHHHHcCCCEEEE
Confidence 9999999987 9999973 999999999999999999999999
Q ss_pred eccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHh-hcCEEEEEeCCeE
Q 000522 1382 DECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHL 1433 (1445)
Q Consensus 1382 DEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~v 1433 (1445)
||||++||..+.+.+.+.|++.. ++.|+|++||+.+.+. .||+|++|++|++
T Consensus 120 DEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 120 DEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 99999999999999999998764 4689999999999888 4899999999974
No 329
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-37 Score=336.68 Aligned_cols=208 Identities=29% Similarity=0.407 Sum_probs=175.2
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCe---eCCCCChHhhhc
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGL---NIINTPVRDLRG 1298 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~---di~~i~~~~lR~ 1298 (1445)
.|+++|++..|+. .++++|||++|+.||.+|+.||||||||||+.+|.|+..|++|+|.+||. |.++++.+ .+
T Consensus 2 ~i~i~~~~~~~~~--~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~--~R 77 (345)
T COG1118 2 SIRINNVKKRFGA--FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVR--DR 77 (345)
T ss_pred ceeehhhhhhccc--ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchh--hc
Confidence 3788899888864 46899999999999999999999999999999999999999999999999 77774443 46
Q ss_pred ceEEEcCCCcccCc-cHHHhcCCCCC-----CChH----HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000522 1299 RFAVVPQSPFLFEG-SLRDNLDPFHM-----NDDL----KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1368 (1445)
Q Consensus 1299 ~i~~VpQdp~lF~g-TIReNLdp~~~-----~sd~----ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1368 (1445)
+||+|.|+..||.- ||++||.++-+ .++. ++.+.|+.|+| +-.-..-..+||||||||+||
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL---------~~la~ryP~QLSGGQrQRVAL 148 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQL---------EGLADRYPAQLSGGQRQRVAL 148 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcc---------cchhhcCchhcChHHHHHHHH
Confidence 89999999999975 99999987642 1222 23333444433 333344567899999999999
Q ss_pred HHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||...|++|+||||.++||.+-.+.+++-+++.. -++|+++|||+.+.+.+ ||||+||++|+|.+.|+|+|-
T Consensus 149 ARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 149 ARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 999999999999999999999999999998888754 38999999999997765 899999999999999999774
No 330
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=7.1e-37 Score=349.06 Aligned_cols=210 Identities=21% Similarity=0.367 Sum_probs=173.2
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC----CCcEEEECCeeCCCCChHhhh
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI----CGGQILVDGLNIINTPVRDLR 1297 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~----~~G~I~IDG~di~~i~~~~lR 1297 (1445)
.++++|++++| . .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..+
T Consensus 4 ~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 58999999999 2 3699999999999999999999999999999999999999 999999999998632 2234
Q ss_pred cceEEEcCCCc-ccC--ccHHHhcCC----CC-CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000522 1298 GRFAVVPQSPF-LFE--GSLRDNLDP----FH-MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1369 (1445)
Q Consensus 1298 ~~i~~VpQdp~-lF~--gTIReNLdp----~~-~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1369 (1445)
+.++|+||+|. .|. .|+.+|+.. .+ ...+++++++++.+++.+. ++.++.....||+|||||++||
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~~~~~LS~Gq~qrv~la 152 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA------ARVLKLYPFEMSGGMLQRMMIA 152 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh------hhhhhcCCcccCHHHHHHHHHH
Confidence 67999999985 343 477777532 11 1233445555555544221 1245666778999999999999
Q ss_pred HHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||+++|+||||||||++||..+.+.+.+.|++..+ ++|||+|+|+++.+.+ ||+|++|++|++++.|++++.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 228 (254)
T PRK10418 153 LALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETL 228 (254)
T ss_pred HHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999999999988643 7899999999999875 899999999999999987653
No 331
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-37 Score=339.21 Aligned_cols=204 Identities=25% Similarity=0.398 Sum_probs=170.7
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCC----ChHhhhc
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRDLRG 1298 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~~lR~ 1298 (1445)
+++ |++++|+.. .+ |+||+|++ |++||+|+||||||||+++|.|+++|++|+|.+||.++... +....|+
T Consensus 2 ~~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 75 (214)
T cd03297 2 LCV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQR 75 (214)
T ss_pred cee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhh
Confidence 345 899999753 34 99999999 99999999999999999999999999999999999998643 3345788
Q ss_pred ceEEEcCCCcccCc-cHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1299 RFAVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1299 ~i~~VpQdp~lF~g-TIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
+++|+||++.+|++ |+++|+..... ..+++ .+....+.++.+|++.........||+|||||++||||++++|
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~-----~~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (214)
T cd03297 76 KIGLVFQQYALFPHLNVRENLAFGLKRKRNRE-----DRISVDELLDLLGLDHLLNRYPAQLSGGEKQRVALARALAAQP 150 (214)
T ss_pred cEEEEecCCccCCCCCHHHHHHHHHhhCCHHH-----HHHHHHHHHHHcCCHhHhhcCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999864 99999974321 11111 1112334455557776677777899999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeec
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G 1437 (1445)
+||||||||++||.++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 151 ELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999987642 7899999999999865 8999999999999876
No 332
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-36 Score=341.31 Aligned_cols=209 Identities=31% Similarity=0.482 Sum_probs=184.8
Q ss_pred EEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------e
Q 000522 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 673 (1445)
Q Consensus 607 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~ 673 (1445)
+++|+++.|+.. ..+++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++| .
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~ 76 (236)
T cd03253 2 EFENVTFAYDPG-----RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRA 76 (236)
T ss_pred EEEEEEEEeCCC-----CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhh
Confidence 578899988531 2359999999999999999999999999999999999999999999976 3
Q ss_pred EEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCC
Q 000522 674 IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 752 (1445)
Q Consensus 674 i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~ 752 (1445)
++|++|+|++++.|++||+.++.. ...+...+.++.+++...+..+|.|.++.++.+..+||||||||++||||++.+|
T Consensus 77 i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p 156 (236)
T cd03253 77 IGVVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNP 156 (236)
T ss_pred EEEECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 899999999999999999998753 3344456677888898888999999999999999999999999999999999999
Q ss_pred CEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHh
Q 000522 753 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 753 ~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+.+.+..||++++|++|++.+.|+.+++..
T Consensus 157 ~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~ 224 (236)
T cd03253 157 PILLLDEATSALDTHTEREIQAA-LRD-VSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLA 224 (236)
T ss_pred CEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999888876 333 334789999999999998899999999999999998887654
No 333
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-37 Score=362.17 Aligned_cols=206 Identities=24% Similarity=0.364 Sum_probs=175.1
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCC----ChHhhhc
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINT----PVRDLRG 1298 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i----~~~~lR~ 1298 (1445)
+++ |++++|+.. . .|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +....|+
T Consensus 2 l~~-~l~k~~~~~---~-~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---C-LTVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---E-EEEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 999999642 2 399999999999999999999999999999999999999999999998653 2445688
Q ss_pred ceEEEcCCCcccCc-cHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1299 RFAVVPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1299 ~i~~VpQdp~lF~g-TIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
+++|+||++.+|+. |+++|+.+... ..++++.++++.+ |++........+||||||||++|||||+++|
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~---------gl~~~~~~~~~~LSgGq~qRvalaraL~~~p 147 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALL---------GIEPLLDRYPGSLSGGEKQRVAIGRALLTAP 147 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHc---------CCchhhhCCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999999974 99999975422 2233444444444 5555555666789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++||||||||+||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|++.
T Consensus 148 ~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i 216 (352)
T PRK11144 148 ELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEV 216 (352)
T ss_pred CEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHH
Confidence 99999999999999999999999987653 7899999999998866 899999999999999998654
No 334
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=2.8e-36 Score=341.28 Aligned_cols=211 Identities=30% Similarity=0.482 Sum_probs=184.6
Q ss_pred EEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------e
Q 000522 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 673 (1445)
Q Consensus 607 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~ 673 (1445)
+++|+++.|..... .++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .
T Consensus 2 ~i~~l~~~~~~~~~---~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (238)
T cd03249 2 EFKNVSFRYPSRPD---VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQ 78 (238)
T ss_pred eEEEEEEecCCCCC---ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhh
Confidence 57888998864211 2359999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCC
Q 000522 674 IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 752 (1445)
Q Consensus 674 i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~ 752 (1445)
++|++|+|++++.|++||+.++.. ...+...+.++.+++...+..+|.|.++..+....+||||||||++||||++.+|
T Consensus 79 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p 158 (238)
T cd03249 79 IGLVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNP 158 (238)
T ss_pred EEEECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCC
Confidence 999999999998999999998753 2344556677778888888899999888889999999999999999999999999
Q ss_pred CEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHh
Q 000522 753 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 753 ~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
++++|||||++||+...+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|+.+++..
T Consensus 159 ~llllDEP~~gLD~~~~~~l~~~-l~~-~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (238)
T cd03249 159 KILLLDEATSALDAESEKLVQEA-LDR-AMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMA 226 (238)
T ss_pred CEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhh
Confidence 99999999999999999988876 433 236789999999999998999999999999999998877653
No 335
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=7.1e-37 Score=360.81 Aligned_cols=188 Identities=27% Similarity=0.364 Sum_probs=159.5
Q ss_pred cceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------------eEEEEcCCCCCCCc-
Q 000522 625 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILSG- 686 (1445)
Q Consensus 625 ~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------------~i~y~~Q~p~l~~~- 686 (1445)
.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| .++||+|++++|+.
T Consensus 7 ~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~~ 86 (363)
T TIGR01186 7 KGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPHM 86 (363)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCCC
Confidence 359999999999999999999999999999999999999999999876 49999999999975
Q ss_pred cHHHHHhcCCCC---Ch-h---hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcC
Q 000522 687 TIRDNILFGKNY---DP-Q---SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDD 759 (1445)
Q Consensus 687 ti~~nI~~g~~~---~~-~---~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe 759 (1445)
||+|||.|+.++ +. + +..++++..+|+.. .+....+|||||||||+||||++.+|+|+||||
T Consensus 87 TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~-----------~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 87 TILQNTSLGPELLGWPEQERKEKALELLKLVGLEEY-----------EHRYPDELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred CHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchh-----------hhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 999999987432 22 2 33344455455332 355667999999999999999999999999999
Q ss_pred CCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhh-hCCEEEEEeCCEEEEecCHhHHHhc
Q 000522 760 VLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 823 (1445)
Q Consensus 760 ~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~~~~~~~~ 823 (1445)
|||+||+.+.+.+.+.+.......++|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999998754321234789999999999865 5999999999999999999998754
No 336
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-36 Score=333.79 Aligned_cols=190 Identities=24% Similarity=0.333 Sum_probs=162.3
Q ss_pred cEEEEEEEEEeCCC--CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC---CCCcEEEECCeeCCCCChHhh
Q 000522 1222 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP---ICGGQILVDGLNIINTPVRDL 1296 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~---~~~G~I~IDG~di~~i~~~~l 1296 (1445)
.+.++||+|.|+.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 47899999999753 5579999999999999999999999999999999999999 89999999999998765 457
Q ss_pred hcceEEEcCCCcccCc-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccC
Q 000522 1297 RGRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKS 1375 (1445)
Q Consensus 1297 R~~i~~VpQdp~lF~g-TIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~ 1375 (1445)
|++++|+||++.+|.+ |+++|+.+.... . . .+....||+|||||++||||++++
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~---------~------------~----~~~~~~LS~Ge~qrl~laral~~~ 136 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC---------K------------G----NEFVRGISGGERKRVSIAEALVSR 136 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh---------c------------c----ccchhhCCHHHHHHHHHHHHHhhC
Confidence 8899999999988875 999999643110 0 1 223346999999999999999999
Q ss_pred CCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEec-cChhHHh-hcCEEEEEeCCeEeeec
Q 000522 1376 SKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIA-HRISTVL-NMDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1376 ~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~Ia-Hrl~ti~-~~DrI~Vl~~G~vvE~G 1437 (1445)
|+||||||||++||+++.+.+.+.|++..+ +.|+|+++ |+.+.+. .||+|++|++|++++.|
T Consensus 137 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 137 ASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred CCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 999999999999999999999999988643 56766655 5556664 58999999999999865
No 337
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.4e-36 Score=361.48 Aligned_cols=207 Identities=24% Similarity=0.385 Sum_probs=173.9
Q ss_pred EEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCC----hHhhhcceEE
Q 000522 1227 NVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTP----VRDLRGRFAV 1302 (1445)
Q Consensus 1227 nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~----~~~lR~~i~~ 1302 (1445)
|++++|+.. .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ....|+++++
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 899999642 24 999999999999999999999999999999999999999999999986542 3456889999
Q ss_pred EcCCCcccCc-cHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000522 1303 VPQSPFLFEG-SLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1380 (1445)
Q Consensus 1303 VpQdp~lF~g-TIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1380 (1445)
+||++.+|++ |+++|+.+... ....+. .....+.++.+|++...+.....||||||||++|||||+++|++||
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~-----~~~~~~~l~~~gL~~~~~~~~~~LSgGqkqRvalAraL~~~p~lll 154 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSER-----RISFERVIELLGIGHLLGRLPGRLSGGEKQRVAIGRALLSSPRLLL 154 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHH-----HHHHHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999986 99999975322 111111 1112334444577766677777899999999999999999999999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1381 LDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1381 LDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|++.
T Consensus 155 LDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 219 (354)
T TIGR02142 155 MDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEV 219 (354)
T ss_pred EcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHH
Confidence 9999999999999999999987643 7899999999999876 899999999999999987653
No 338
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.4e-36 Score=331.88 Aligned_cols=182 Identities=29% Similarity=0.424 Sum_probs=161.5
Q ss_pred cEEEEEEEEEeCCC----CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCC--CCCCcEEEECCeeCCCCChHh
Q 000522 1222 LIEFQNVTMRYKPS----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRD 1295 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~----~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~ 1295 (1445)
.|+++||+++|+.. ..++|+|+||+|++||+++|+|++|||||||+++|.|++ +|++|+|.+||.++.. ..
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 48999999999752 257999999999999999999999999999999999999 9999999999999875 36
Q ss_pred hhcceEEEcCCCcccCc-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc
Q 000522 1296 LRGRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK 1374 (1445)
Q Consensus 1296 lR~~i~~VpQdp~lF~g-TIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr 1374 (1445)
+|++++++||++.+|.+ |+++|+.... .. . .||+|||||++||||+++
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~~------------~~---------~----------~LS~G~~qrv~laral~~ 128 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFAA------------KL---------R----------GLSGGERKRVSIALELVS 128 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHHH------------Hh---------c----------cCCHHHHHHHHHHHHHHc
Confidence 78899999999998875 9999984210 00 0 699999999999999999
Q ss_pred CCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChh-HHh-hcCEEEEEeCCeEeeec
Q 000522 1375 SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIS-TVL-NMDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1375 ~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~-ti~-~~DrI~Vl~~G~vvE~G 1437 (1445)
+|++++|||||++||..+.+.+.+.|++.. +++|+|+|+|+++ .+. -||+|++|++|++++.|
T Consensus 129 ~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 129 NPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 999999999999999999999999998764 4899999999997 454 48999999999998765
No 339
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=1.2e-36 Score=347.27 Aligned_cols=214 Identities=21% Similarity=0.344 Sum_probs=177.7
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCee-----CCCCChHh-
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN-----IINTPVRD- 1295 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~d-----i~~i~~~~- 1295 (1445)
.|+++||+++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +...+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGG--GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCC--ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 4899999999964 358999999999999999999999999999999999999999999999988 77766553
Q ss_pred ---hhcceEEEcCCCc--c-cCccHHHhcCC----CCCCChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCCCCChhHHH
Q 000522 1296 ---LRGRFAVVPQSPF--L-FEGSLRDNLDP----FHMNDDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGISFSVGQRQ 1364 (1445)
Q Consensus 1296 ---lR~~i~~VpQdp~--l-F~gTIReNLdp----~~~~sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~~LSgGQrQ 1364 (1445)
+|+.++++||+|. + +..|+.+|+.. .......+. ...+.+.++.+|++ +..+.....|||||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~l~~l~l~~~~~~~~~~~LSgG~~q 155 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNI-----RAAAHDWLEEVEIDPTRIDDLPRAFSGGMQQ 155 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHH-----HHHHHHHHHHcCCChhhhhcCchhcCHHHHH
Confidence 3467999999985 2 23588888732 111111111 12334556666775 5677778899999999
Q ss_pred HHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|++|||||+++|++|||||||++||+.+.+.+.+.|++.. .+.|+|+|+|+++.+.. ||++++|++|++++.|++++
T Consensus 156 rv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~~~~ 235 (253)
T TIGR02323 156 RLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGLTDQ 235 (253)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999999999998764 37899999999999985 89999999999999998754
Q ss_pred C
Q 000522 1442 P 1442 (1445)
Q Consensus 1442 ~ 1442 (1445)
.
T Consensus 236 ~ 236 (253)
T TIGR02323 236 V 236 (253)
T ss_pred H
Confidence 3
No 340
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=2e-36 Score=332.54 Aligned_cols=182 Identities=23% Similarity=0.335 Sum_probs=161.8
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcC--CCCCCcEEEECCeeCCCCChHhh-hcc
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL--TPICGGQILVDGLNIINTPVRDL-RGR 1299 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl--~~~~~G~I~IDG~di~~i~~~~l-R~~ 1299 (1445)
++++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+ ++|++|+|.+||.++.+.+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999963 4699999999999999999999999999999999999 58999999999999998876654 556
Q ss_pred eEEEcCCCcccCc-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1300 FAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1300 i~~VpQdp~lF~g-TIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
++|+||+|.+|++ |+++|++ ....+||+|||||++||||++++|+|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l~---------------------------------~~~~~LS~G~~qrv~laral~~~p~i 125 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFLR---------------------------------YVNEGFSGGEKKRNEILQLLLLEPDL 125 (200)
T ss_pred EEEeecChhhccCccHHHHHh---------------------------------hccccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999986 5666550 01136999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHh--hcCEEEEEeCCeEeeecCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL--NMDEILILDHGHLPHCGCA 1439 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~--~~DrI~Vl~~G~vvE~G~p 1439 (1445)
++|||||++||..+.+.+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.|+.
T Consensus 126 lllDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~~~ 189 (200)
T cd03217 126 AILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSGDK 189 (200)
T ss_pred EEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEccH
Confidence 99999999999999999999998764 3789999999999998 5899999999999999843
No 341
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.4e-36 Score=328.87 Aligned_cols=172 Identities=30% Similarity=0.502 Sum_probs=156.5
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCCh-Hhhhcce
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRF 1300 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i 1300 (1445)
.++++|++++| +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +..|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999998 8999999999999999999999999999999999999999999999999988764 4568899
Q ss_pred EEEcCCC---ccc-CccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1301 AVVPQSP---FLF-EGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1301 ~~VpQdp---~lF-~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
+|+||++ .++ ..|++||+.+... ||+|||||++||||++++|
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~----------------------------------LS~G~~qrl~la~al~~~p 123 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL----------------------------------LSGGNQQKVVLARWLARDP 123 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh----------------------------------cCHHHHHHHHHHHHHccCC
Confidence 9999995 344 5799999864310 9999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeE
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHL 1433 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~v 1433 (1445)
++|+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++
T Consensus 124 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 124 RVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999998764 47999999999999987 899999999985
No 342
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=3.6e-33 Score=336.96 Aligned_cols=450 Identities=15% Similarity=0.170 Sum_probs=316.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCh--hH---HHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 000522 338 QYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSD--GE---IQTFMSVDTDRTVNLAN-SFHDAWSLPFQIGVALY 411 (1445)
Q Consensus 338 ~~~~~~~r~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~--g~---i~nlms~D~~~i~~~~~-~~~~~~~~p~~i~i~~~ 411 (1445)
...|...++..+.|..|+..+.+|-|.-....+-.... +. .-..+..|+..+.+... ....+..+.+.++.-..
T Consensus 105 ~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~ 184 (604)
T COG4178 105 AQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTG 184 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 45677888999999999999999999877543322111 11 22477788877766433 33344445555544455
Q ss_pred HHhhHhH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCch
Q 000522 412 LLYTQVK---------------FAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWE 476 (1445)
Q Consensus 412 lL~~~lg---------------~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e 476 (1445)
.||...| ..+.+.++.+++...+..+++|..-+...+..+.-..--.....+..+...|-+|+.|
T Consensus 185 iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE 264 (604)
T COG4178 185 ILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGE 264 (604)
T ss_pred HHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCc
Confidence 5663333 2222222233333333334444444443333333333334556788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHhCCCCCHhHHHHHHHHHHHHHHHHHHH
Q 000522 477 QIFSSWLMKTRSSEVKHLSTRKYLDAWCVFFW----ATTPTLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSF 552 (1445)
Q Consensus 477 ~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~----~~~~~~~~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~l~~pl~~l 552 (1445)
+...+++++.-..=++..++......-...+. .++. +++.+ .++=....++++-+.+.++-..|+.+...++-+
T Consensus 265 ~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~-v~P~l-i~ap~~f~g~i~~G~lmqa~~aF~~v~sslswf 342 (604)
T COG4178 265 KVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSV-VLPIL-IAAPRYFSGQITFGGLMQAVGAFGQVHSSLSWF 342 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHH-HHHHH-hccHhhhcCcChHHHHHHHHHHHHHHHHHHHHH
Confidence 98888777654433333332222211111111 1111 11111 111124577899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCC---cchhhhhhcCCCCcccCCCc-cCCCCCceEEEEccEEecccCCcccccccee
Q 000522 553 PWVINGLIDAFISIRRLTRFLGCSE---YKHELEQAANSPSYISNGLS-NFNSKDMAVIMQDATCSWYCNNEEEQNVVLN 628 (1445)
Q Consensus 553 ~~~i~~~~~a~~s~~Ri~~fL~~~e---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~ 628 (1445)
...++.+.+=+++..|+.+|-..-+ .++.. +... .... .....+..|.++|++..-+.. ...++
T Consensus 343 i~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~------~~~~-~~~~~~~~~~~~~i~~~nl~l~~p~~-----~~ll~ 410 (604)
T COG4178 343 IDNYDAIADWRATLLRLAEFRQALEAAQMDTEK------PART-GRRIDFDDNADHGITLENLSLRTPDG-----QTLLS 410 (604)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhccCcccc------cCcc-cccccccccccceeEEeeeeEECCCC-----Ceeec
Confidence 9999999999999999999985322 11100 0000 0000 000115789999999986543 24599
Q ss_pred eeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEc-C-eEEEEcCCCCCCCccHHHHHhcCC---CCChhhH
Q 000522 629 QVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHAS-G-SIAYVPQVPWILSGTIRDNILFGK---NYDPQSY 703 (1445)
Q Consensus 629 ~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~-~-~i~y~~Q~p~l~~~ti~~nI~~g~---~~~~~~~ 703 (1445)
+.||++++|+-+.|.|+||||||||+++|.|..|--+|+|... + .+-|+||.|.+..||.||-|++.. +++++.+
T Consensus 411 ~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l 490 (604)
T COG4178 411 ELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAEL 490 (604)
T ss_pred cceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHH
Confidence 9999999999999999999999999999999999999999886 3 489999999999999999999964 2778999
Q ss_pred HHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccC
Q 000522 704 SETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML 783 (1445)
Q Consensus 704 ~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~ 783 (1445)
.+++..|+|.+-.+.+.+-+ .-...||||||||+++||.++++|++++|||.|||||++++..+++. +.. .+.
T Consensus 491 ~~vL~~vgL~~L~~rl~~~~-----~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~-l~~-~lp 563 (604)
T COG4178 491 VAVLHKVGLGDLAERLDEED-----RWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQL-LKE-ELP 563 (604)
T ss_pred HHHHHHcCcHHHHHHHhccC-----cHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHH-HHh-hCC
Confidence 99999999998887765432 24568999999999999999999999999999999999999999987 444 467
Q ss_pred CceEEEEccCchhhhhCCEEEEEeC
Q 000522 784 QKTRILCTHNVQAISAADMVVVMDK 808 (1445)
Q Consensus 784 ~~t~ilvth~~~~l~~~d~i~~l~~ 808 (1445)
+.|+|-|.|+.......++.+.+.+
T Consensus 564 ~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 564 DATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred CCEEEEeccchhhHHHHhhheeecc
Confidence 8899999999988887777666643
No 343
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-36 Score=357.50 Aligned_cols=202 Identities=28% Similarity=0.422 Sum_probs=170.2
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------e
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 673 (1445)
.++++|+++.|+.+ ..+|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++| .
T Consensus 3 ~l~i~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ 77 (356)
T PRK11650 3 GLKLQAVRKSYDGK-----TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRD 77 (356)
T ss_pred EEEEEeEEEEeCCC-----CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCC
Confidence 37899999998421 2359999999999999999999999999999999999999999999987 4
Q ss_pred EEEEcCCCCCCC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000522 674 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1445)
Q Consensus 674 i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 745 (1445)
||||+|++.+|. .||+|||.|+.. .+. ++.+++++..+|..... ....+|||||||||+||
T Consensus 78 ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~QRvalA 146 (356)
T PRK11650 78 IAMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLD-----------RKPRELSGGQRQRVAMG 146 (356)
T ss_pred EEEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhh-----------CChhhCCHHHHHHHHHH
Confidence 999999999996 599999998743 222 34556677777754443 34458999999999999
Q ss_pred HHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhh-hCCEEEEEeCCEEEEecCHhHHHhc
Q 000522 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 823 (1445)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~~~~~~~~ 823 (1445)
||++.+|+++|||||||+||+.+.+.+.+.+ .... ..+.|+|+|||+.+.+. .||+|++|++|++++.|+++++...
T Consensus 147 RAL~~~P~llLLDEP~s~LD~~~r~~l~~~l-~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 147 RAIVREPAVFLFDEPLSNLDAKLRVQMRLEI-QRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 9999999999999999999999999888763 3212 23789999999998765 4999999999999999999998654
No 344
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=1.8e-36 Score=327.33 Aligned_cols=177 Identities=32% Similarity=0.502 Sum_probs=159.1
Q ss_pred EEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEE
Q 000522 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1445)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1445)
+++||+++|+. .++|+|+||++++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 57899999964 4699999999999999999999999999999999999999999999999999988888889999999
Q ss_pred cCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEec
Q 000522 1304 PQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDE 1383 (1445)
Q Consensus 1304 pQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDE 1383 (1445)
|| +++.+++.+ .....+.+||+|||||++||||++++|+++||||
T Consensus 79 ~q--------------------------~l~~~gl~~---------~~~~~~~~LS~G~~qrl~laral~~~p~llllDE 123 (180)
T cd03214 79 PQ--------------------------ALELLGLAH---------LADRPFNELSGGERQRVLLARALAQEPPILLLDE 123 (180)
T ss_pred HH--------------------------HHHHcCCHh---------HhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 99 455555543 3344566899999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHh-hcCEEEEEeCCeEeeec
Q 000522 1384 CTANVDAQTASILQNAISSECK--GMTVITIAHRISTVL-NMDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1384 aTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G 1437 (1445)
||++||.++.+.+.+.|++..+ ++|+|++||+++.+. -||++++|++|++++.|
T Consensus 124 P~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 124 PTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred CccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999987654 789999999999985 58999999999998764
No 345
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-36 Score=331.17 Aligned_cols=181 Identities=23% Similarity=0.371 Sum_probs=160.4
Q ss_pred cEEEEEEEEEeCCC--CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCC--CCCCcEEEECCeeCCCCChHhhh
Q 000522 1222 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDLR 1297 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~lR 1297 (1445)
.|+++|++++|++. ..++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 58999999999742 246999999999999999999999999999999999986 489999999999986 5678
Q ss_pred cceEEEcCCCcccCc-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1298 GRFAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1298 ~~i~~VpQdp~lF~g-TIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
+++++++|+|.+|.+ |+++|+.... .++ +||||||||++||||++++|
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~---------~~~----------------------~LSgGe~qrv~la~al~~~p 127 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFSA---------LLR----------------------GLSVEQRKRLTIGVELAAKP 127 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHHH---------HHh----------------------cCCHHHhHHHHHHHHHhcCC
Confidence 899999999988875 9999986310 000 69999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhH--HhhcCEEEEEeC-CeEeeec
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST--VLNMDEILILDH-GHLPHCG 1437 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~t--i~~~DrI~Vl~~-G~vvE~G 1437 (1445)
++|+|||||++||.++.+.+.+.|++.. +++|+|+|||+++. ...||+|++|++ |++++.|
T Consensus 128 ~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 128 SILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred cEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 9999999999999999999999998764 48999999999984 456899999999 9999876
No 346
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-36 Score=351.85 Aligned_cols=209 Identities=27% Similarity=0.427 Sum_probs=171.5
Q ss_pred CCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC---------
Q 000522 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------- 672 (1445)
Q Consensus 602 ~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------- 672 (1445)
.+..++++|++|.|+.... ...++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 18 ~~~~l~~~nl~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~ 96 (320)
T PRK13631 18 DDIILRVKNLYCVFDEKQE-NELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNN 96 (320)
T ss_pred CCceEEEEeEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccc
Confidence 4457999999999964211 113469999999999999999999999999999999999999999998864
Q ss_pred --------------------eEEEEcCCC--CCCCccHHHHHhcCCC---CChh----hHHHHHHHhcchHHHhhccCCC
Q 000522 673 --------------------SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGD 723 (1445)
Q Consensus 673 --------------------~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~d~~~~~~gd 723 (1445)
.|+||+|+| ++++.||+|||.|+.. .+.+ +..+.++.+++..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~--------- 167 (320)
T PRK13631 97 HELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD--------- 167 (320)
T ss_pred ccccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh---------
Confidence 279999998 7899999999998742 2222 2333444444432
Q ss_pred cccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhh-hCCE
Q 000522 724 MAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADM 802 (1445)
Q Consensus 724 ~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~~d~ 802 (1445)
...++.+.+||||||||++||||+..+|+++||||||++||+.+.+.+++. +.....+++|+|++||+++.+. .||+
T Consensus 168 -~~~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~-L~~l~~~g~TiiivtHd~~~~~~~adr 245 (320)
T PRK13631 168 -SYLERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQL-ILDAKANNKTVFVITHTMEHVLEVADE 245 (320)
T ss_pred -hHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCE
Confidence 224667889999999999999999999999999999999999999988876 3321235789999999999875 5999
Q ss_pred EEEEeCCEEEEecCHhHHHh
Q 000522 803 VVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 803 i~~l~~G~i~~~g~~~~~~~ 822 (1445)
|++|++|++++.|+++++..
T Consensus 246 i~vl~~G~i~~~g~~~~~~~ 265 (320)
T PRK13631 246 VIVMDKGKILKTGTPYEIFT 265 (320)
T ss_pred EEEEECCEEEEeCCHHHHhc
Confidence 99999999999999998754
No 347
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=6.8e-36 Score=334.06 Aligned_cols=205 Identities=34% Similarity=0.467 Sum_probs=180.5
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|... . .++++|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~-~---~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~ 77 (220)
T cd03245 2 RIEFRNVSFSYPNQ-E---IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLR 77 (220)
T ss_pred eEEEEEEEEEcCCC-C---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHH
Confidence 37789999998532 1 2359999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHcc
Q 000522 673 -SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 750 (1445)
Q Consensus 673 -~i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~ 750 (1445)
.++|++|+|++++.|++||+.++.. .++++..+.++.+++...++..|.|.+|.+.....+||||||||++||||+..
T Consensus 78 ~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~ 157 (220)
T cd03245 78 RNIGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLN 157 (220)
T ss_pred hhEEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhc
Confidence 3899999999998999999988643 34556778888899988889999999999999999999999999999999999
Q ss_pred CCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEec
Q 000522 751 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 751 ~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g 815 (1445)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 158 ~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 158 DPPILLLDEPTSAMDMNSEERLKER-LRQ-LLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CCCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999988876 333 33448999999999988779999999999997653
No 348
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.4e-36 Score=354.72 Aligned_cols=203 Identities=28% Similarity=0.355 Sum_probs=168.8
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|+++.|+.... ..++|+|+||++++||+++|+|+||||||||+++|.|+.+|++|+|.++|
T Consensus 2 I~~~~lsk~y~~~~~--~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~ 79 (343)
T TIGR02314 2 IKLSNITKVFHQGTK--TIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTK 79 (343)
T ss_pred EEEEEEEEEECCCCc--ceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHH
Confidence 678999999963211 12469999999999999999999999999999999999999999999875
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
.|||++|++.+++ .|++|||.++.. .+. ++..++++..+|.+.. ......||||||||
T Consensus 80 ~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~-----------~~~~~~LSgGqkQR 148 (343)
T TIGR02314 80 ARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKH-----------DSYPSNLSGGQKQR 148 (343)
T ss_pred HhcCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHH
Confidence 4899999999985 699999987532 222 2344556666664322 34556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhH
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 819 (1445)
|+||||+..+|+++|||||||+||+.+.+.+++. +..-. ..+.|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 149 V~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~l-L~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~ 227 (343)
T TIGR02314 149 VAIARALASNPKVLLCDEATSALDPATTQSILEL-LKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSE 227 (343)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999998876 33211 237899999999999866 99999999999999999998
Q ss_pred HHh
Q 000522 820 LAV 822 (1445)
Q Consensus 820 ~~~ 822 (1445)
+..
T Consensus 228 v~~ 230 (343)
T TIGR02314 228 IFS 230 (343)
T ss_pred HHc
Confidence 864
No 349
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=3.4e-36 Score=320.35 Aligned_cols=164 Identities=33% Similarity=0.449 Sum_probs=151.0
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+++|++++|+.+ +++|+|+||+|++||+++|+|++|||||||+++|.|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999643 46999999999999999999999999999999999999999999999873 68999
Q ss_pred EcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000522 1303 VPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1445)
Q Consensus 1303 VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1445)
+||+|.++++|++||+... ....||+|||||++||||++++|++++||
T Consensus 69 ~~q~~~~~~~tv~~nl~~~--------------------------------~~~~LS~G~~~rv~laral~~~p~~lllD 116 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP--------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLD 116 (166)
T ss_pred ECCCCccccccHHHHhhcc--------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEE
Confidence 9999999999999999642 13479999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCCe
Q 000522 1383 ECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGH 1432 (1445)
Q Consensus 1383 EaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G~ 1432 (1445)
|||++||.++.+.+.+.|++. ++|+|++||+++....||+|++|++|-
T Consensus 117 EPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 117 EATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred CCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 999999999999999999876 689999999999888899999999864
No 350
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=302.40 Aligned_cols=198 Identities=24% Similarity=0.414 Sum_probs=172.2
Q ss_pred EeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCccc
Q 000522 1231 RYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLF 1310 (1445)
Q Consensus 1231 ~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF 1310 (1445)
.|.....++|+|+||++++||.++|.||||||||||++.+.-+..|++|.++..|.|+++++++.+|++++|+-|.|.||
T Consensus 10 ~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLf 89 (223)
T COG4619 10 GYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALF 89 (223)
T ss_pred HhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCcccc
Confidence 46666678999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccHHHhcC-CC---CCCChH-HHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccc
Q 000522 1311 EGSLRDNLD-PF---HMNDDL-KIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECT 1385 (1445)
Q Consensus 1311 ~gTIReNLd-p~---~~~sd~-ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaT 1385 (1445)
.+||.+||- |+ +...|. .-.+-|+++++. ++.+..+-.+||||||||++|+|-|---|+||+|||+|
T Consensus 90 g~tVeDNlifP~~~r~rr~dr~aa~~llar~~l~--------~~~L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~T 161 (223)
T COG4619 90 GDTVEDNLIFPWQIRNRRPDRAAALDLLARFALP--------DSILTKNITELSGGEKQRIALIRNLQFMPKILLLDEIT 161 (223)
T ss_pred ccchhhccccchHHhccCCChHHHHHHHHHcCCc--------hhhhcchhhhccchHHHHHHHHHHhhcCCceEEecCch
Confidence 999999985 33 222332 223334444433 23455566689999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhH-HhhcCEEEEEeCCeEeee
Q 000522 1386 ANVDAQTASILQNAISSEC--KGMTVITIAHRIST-VLNMDEILILDHGHLPHC 1436 (1445)
Q Consensus 1386 S~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~t-i~~~DrI~Vl~~G~vvE~ 1436 (1445)
|+||..+.+.|.+.|.+++ ++..++.|||+-+. ++.+||++-+..|++-|.
T Consensus 162 sALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~~ 215 (223)
T COG4619 162 SALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGEM 215 (223)
T ss_pred hhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCccccc
Confidence 9999999999999999988 48899999999987 889999999999987554
No 351
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=3.2e-36 Score=333.15 Aligned_cols=193 Identities=28% Similarity=0.382 Sum_probs=162.7
Q ss_pred EEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCCh----Hhhhcce
Q 000522 1225 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV----RDLRGRF 1300 (1445)
Q Consensus 1225 f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~----~~lR~~i 1300 (1445)
++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4789999964 469999999999999999999999999999999999999999999999999875542 2467889
Q ss_pred EEEcCCCcccC-ccHHHhcCCCCC---CC----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1301 AVVPQSPFLFE-GSLRDNLDPFHM---ND----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1301 ~~VpQdp~lF~-gTIReNLdp~~~---~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
++++|+|.+|+ .|++||+.+... .. ++++.++++. +|++...+....+||+|||||++|||||
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~lS~G~~qr~~laral 149 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEK---------VGLNLKLKQKIYELSGGEQQRVALARAI 149 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHH---------cCchhhhcCChhhCCHHHHHHHHHHHHH
Confidence 99999999997 599999965211 11 2223333443 3555455555668999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhhcCEEEEE
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL 1428 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl 1428 (1445)
+++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+..||+|++|
T Consensus 150 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 150 LKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 99999999999999999999999999998764 479999999999988889999885
No 352
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-36 Score=344.85 Aligned_cols=207 Identities=25% Similarity=0.359 Sum_probs=170.0
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++||+++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ...+++++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~---~~~~~~i~ 81 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ---ALQKNLVA 81 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH---hhccceEE
Confidence 58999999999632 469999999999999999999999999999999999999999999999998752 12234699
Q ss_pred EEcCCCcc---cCccHHHhcCCCC--------CC---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHH
Q 000522 1302 VVPQSPFL---FEGSLRDNLDPFH--------MN---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLIC 1367 (1445)
Q Consensus 1302 ~VpQdp~l---F~gTIReNLdp~~--------~~---sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~ 1367 (1445)
|+||+|.+ +..++++|+.... .. .++++.++++..+ ++........+||||||||++
T Consensus 82 ~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g---------l~~~~~~~~~~LSgG~~qrv~ 152 (272)
T PRK15056 82 YVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVD---------MVEFRHRQIGELSGGQKKRVF 152 (272)
T ss_pred EeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcC---------ChhHhcCCcccCCHHHHHHHH
Confidence 99999865 4568999975321 00 1123344444444 443344455679999999999
Q ss_pred HHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1368 LARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1368 LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+++++ +|++++.|+|++.
T Consensus 153 laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~ 228 (272)
T PRK15056 153 LARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETT 228 (272)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhc
Confidence 9999999999999999999999999999999998764 47899999999998764 8999777 8999999998764
No 353
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=5.5e-36 Score=341.86 Aligned_cols=216 Identities=23% Similarity=0.320 Sum_probs=176.2
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcC--CCCCCcEEEECCeeCCCCChHhhhc-
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRL--TPICGGQILVDGLNIINTPVRDLRG- 1298 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl--~~~~~G~I~IDG~di~~i~~~~lR~- 1298 (1445)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++...+.+..++
T Consensus 7 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNE--NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCC--EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 4899999999964 3699999999999999999999999999999999998 6899999999999999888766554
Q ss_pred ceEEEcCCCcccCc-cHHHhcCCCCC----C---ChHHHHHHHHHccHHHHHHhCCCc-hhhhcCCC-CCChhHHHHHHH
Q 000522 1299 RFAVVPQSPFLFEG-SLRDNLDPFHM----N---DDLKIWSVLEKCHVKEEVEAVGLE-TFVKESGI-SFSVGQRQLICL 1368 (1445)
Q Consensus 1299 ~i~~VpQdp~lF~g-TIReNLdp~~~----~---sd~ei~~aL~~~~l~~~i~~lgLd-t~v~e~G~-~LSgGQrQrl~L 1368 (1445)
.++++||+|.+|++ |+++|+..... . .+.+-++..+ ...+.++.+|+. +..+.... .||||||||++|
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~l~~~~~~~~~~~~LSgG~~qrv~l 162 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLE--IINEKLKLVGMDPSFLSRNVNEGFSGGEKKRNEI 162 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHH--HHHHHHHHcCCchhhhccccccCCCHHHHHHHHH
Confidence 48999999999987 78999753210 0 0100001001 122333334564 34444443 599999999999
Q ss_pred HHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh--cCEEEEEeCCeEeeecCCCC
Q 000522 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN--MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~--~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
|||++++|+||||||||++||.++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+|+.
T Consensus 163 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 238 (252)
T CHL00131 163 LQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGDAEL 238 (252)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecChhh
Confidence 999999999999999999999999999999998764 48999999999999876 79999999999999999964
No 354
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.4e-36 Score=352.49 Aligned_cols=202 Identities=28% Similarity=0.411 Sum_probs=169.3
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1445)
..++++|+++.|.. ..+|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r 78 (351)
T PRK11432 5 NFVVLKNITKRFGS------NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQR 78 (351)
T ss_pred cEEEEEeEEEEECC------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHC
Confidence 36889999999952 2359999999999999999999999999999999999999999999986
Q ss_pred eEEEEcCCCCCCCc-cHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHH
Q 000522 673 SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 744 (1445)
Q Consensus 673 ~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~l 744 (1445)
+||||+|++.+|+. ||+|||.|+.. .++ ++.+++++..++... .......|||||||||+|
T Consensus 79 ~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~-----------~~r~~~~LSgGq~QRVaL 147 (351)
T PRK11432 79 DICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGF-----------EDRYVDQISGGQQQRVAL 147 (351)
T ss_pred CEEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHH
Confidence 59999999999965 99999998743 222 234455555555432 234557899999999999
Q ss_pred HHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhh-hCCEEEEEeCCEEEEecCHhHHHh
Q 000522 745 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 745 ARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
|||++.+|+++|||||||+||+.+.+.+.+. +.... ..++|+|+|||+.+.+. .||+|++|++|++.+.|+++++..
T Consensus 148 ARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~-l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~ 226 (351)
T PRK11432 148 ARALILKPKVLLFDEPLSNLDANLRRSMREK-IRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYR 226 (351)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999988776 33211 23789999999999875 499999999999999999999865
Q ss_pred c
Q 000522 823 S 823 (1445)
Q Consensus 823 ~ 823 (1445)
.
T Consensus 227 ~ 227 (351)
T PRK11432 227 Q 227 (351)
T ss_pred C
Confidence 3
No 355
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.8e-37 Score=315.17 Aligned_cols=220 Identities=24% Similarity=0.352 Sum_probs=190.4
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhh-hcc
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGR 1299 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~ 1299 (1445)
+.+..+|+..+|.. .+|+++|||++++||.||+.||+|+||||.+.++.|+..|++|+|.+||.||..+|.+.- |-.
T Consensus 3 ~~L~a~~l~K~y~k--r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKK--RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCC--eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 45788999999974 479999999999999999999999999999999999999999999999999999998764 445
Q ss_pred eEEEcCCCcccCc-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1300 FAVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1300 i~~VpQdp~lF~g-TIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
|+|+||||.+|.+ ||+|||..--+..+.+.+.+-++..+.+.++.+.+...-...|.+||||||+|+-|||||..+|+.
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a~sLSGGERRR~EIARaLa~~P~f 160 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKAYSLSGGERRRVEIARALAANPKF 160 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcccccccchHHHHHHHHHHhcCCCE
Confidence 9999999999987 999998644333322233344455556666666777777788889999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChh-HHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRIS-TVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~-ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++||||.+++|+-+-..||+.|+... +|--|++.-|... |+.-|||.+++.+|+|...|+|++.
T Consensus 161 iLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei 226 (243)
T COG1137 161 ILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEI 226 (243)
T ss_pred EEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHH
Confidence 99999999999999999999998764 5778999999965 7778999999999999999999875
No 356
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=8.2e-36 Score=338.44 Aligned_cols=198 Identities=26% Similarity=0.399 Sum_probs=170.4
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++| +..++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 4899999999964 4699999999999999999999999999999999999999999999987 35799
Q ss_pred EEcCCCcccC---ccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1302 VVPQSPFLFE---GSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1302 ~VpQdp~lF~---gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
|+||+|.++. .|+++|+......+++++.++++.+++.+. .......||+|||||++||||++++|++
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~---------~~~~~~~LSgGq~qrv~laral~~~p~l 141 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHL---------IDAPMQKLSGGETQRVLLARALLNRPQL 141 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHH---------HhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999998765 389999754333455667777777766543 3334557999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1379 LCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++ ++++.|+|++.
T Consensus 142 llLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~ 207 (251)
T PRK09544 142 LVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVV 207 (251)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHH
Confidence 999999999999999999999987643 7999999999999865 899999965 79999988653
No 357
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=4.7e-36 Score=305.28 Aligned_cols=193 Identities=25% Similarity=0.381 Sum_probs=167.7
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
|+|+|++-.|+.. .++|+||||+|++||++.++||||||||||+|+|.++..|++|+|.++|
T Consensus 2 I~f~~V~k~Y~~g-----~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~ 76 (223)
T COG2884 2 IRFENVSKAYPGG-----REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPF 76 (223)
T ss_pred eeehhhhhhcCCC-----chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccch
Confidence 6789999988754 2349999999999999999999999999999999999999999999876
Q ss_pred ---eEEEEcCCCCCC-CccHHHHHhcCCCC---C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 ---SIAYVPQVPWIL-SGTIRDNILFGKNY---D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~-~~ti~~nI~~g~~~---~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
+||+|+|+--|. +-||.||+.|.... . +++..++++..+|.+....+|. .||||||||
T Consensus 77 LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQR 145 (223)
T COG2884 77 LRRQIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQR 145 (223)
T ss_pred hhheeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHH
Confidence 699999999866 45999999986432 2 3466778888999888888875 899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEec
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1445)
|+||||+..+|++||-||||.+|||..+..|++. +..--..|.||+++||+.+.+.. --+++.+++|+++...
T Consensus 146 vaIARAiV~~P~vLlADEPTGNLDp~~s~~im~l-feeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 146 VAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRL-FEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHHHHccCCCeEeecCCCCCCChHHHHHHHHH-HHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 9999999999999999999999999999999985 32223468899999999999987 5689999999998653
No 358
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.3e-35 Score=331.16 Aligned_cols=199 Identities=39% Similarity=0.692 Sum_probs=175.2
Q ss_pred EEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000522 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1445)
Q Consensus 607 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1445)
.+.|+.|.|+.. ..+++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~~~~~~~~~-----~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (218)
T cd03290 2 QVTNGYFSWGSG-----LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSR 76 (218)
T ss_pred eeeeeEEecCCC-----CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchh
Confidence 456888888643 2359999999999999999999999999999999999999999998854
Q ss_pred ---eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHc
Q 000522 673 ---SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 749 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly 749 (1445)
.++|++|+|.+++.|++||+.++.+++.++.+++++++++...++..|.|+++.++....+||||||||++||||++
T Consensus 77 ~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~ 156 (218)
T cd03290 77 NRYSVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALY 156 (218)
T ss_pred hcceEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHh
Confidence 38999999999999999999987666666778899999998888889999999999999999999999999999999
Q ss_pred cCCCEEEEcCCCcCcCHHHHHHHHHH-hhcCcccCCceEEEEccCchhhhhCCEEEEEeCCE
Q 000522 750 HGSDIYMLDDVLSAVDAQVARWILSN-AIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQ 810 (1445)
Q Consensus 750 ~~~~illlDe~~s~lD~~~~~~i~~~-~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~ 810 (1445)
.+|+++||||||++||+.+.+.+++. ++.....++.|+|++||+.+.+..||++++|++|.
T Consensus 157 ~~p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 157 QNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred hCCCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999988887762 22221224689999999999998899999999874
No 359
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=8.1e-36 Score=339.72 Aligned_cols=213 Identities=18% Similarity=0.273 Sum_probs=168.9
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCC--CCCCcEEEECCeeCCCCChHhhh-cc
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLT--PICGGQILVDGLNIINTPVRDLR-GR 1299 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~--~~~~G~I~IDG~di~~i~~~~lR-~~ 1299 (1445)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++...+....+ ..
T Consensus 2 i~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVED--KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 789999999964 36999999999999999999999999999999999995 69999999999999888776654 57
Q ss_pred eEEEcCCCcccCc-cHHHhcCCC-C---CCChHHHHHHHHHccH----HHHHHhCCCchh-hhcCC-CCCChhHHHHHHH
Q 000522 1300 FAVVPQSPFLFEG-SLRDNLDPF-H---MNDDLKIWSVLEKCHV----KEEVEAVGLETF-VKESG-ISFSVGQRQLICL 1368 (1445)
Q Consensus 1300 i~~VpQdp~lF~g-TIReNLdp~-~---~~sd~ei~~aL~~~~l----~~~i~~lgLdt~-v~e~G-~~LSgGQrQrl~L 1368 (1445)
+++++|+|.+++. |..+|+... . .....+ .++..++ .+.++.+|++.. ..... .+||||||||++|
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~LS~G~~qrv~l 156 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQE---PLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDI 156 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccc---cchHHHHHHHHHHHHHHcCCChhhcccCCCCCCCHHHHHHHHH
Confidence 9999999987765 544443210 0 000000 1111111 223333355321 22222 2699999999999
Q ss_pred HHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC-CcEEEEeccChhHHhh--cCEEEEEeCCeEeeecCCC
Q 000522 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECK-GMTVITIAHRISTVLN--MDEILILDHGHLPHCGCAA 1440 (1445)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~-~~TvI~IaHrl~ti~~--~DrI~Vl~~G~vvE~G~p~ 1440 (1445)
|||++++|+||||||||++||.++.+.+.+.|++..+ ++|||+|||+++.+.. +|+|++|++|++++.|+++
T Consensus 157 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~~ 231 (248)
T PRK09580 157 LQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFT 231 (248)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCHH
Confidence 9999999999999999999999999999999887643 7899999999999987 7999999999999999875
No 360
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=5.7e-36 Score=337.61 Aligned_cols=195 Identities=29% Similarity=0.368 Sum_probs=159.9
Q ss_pred CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEc-CCCcccC-ccH
Q 000522 1237 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVP-QSPFLFE-GSL 1314 (1445)
Q Consensus 1237 ~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~Vp-Qdp~lF~-gTI 1314 (1445)
.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ...+|++++|+| |++.+|. .|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcH
Confidence 4699999999999999999999999999999999999999999999999987653 346788999997 6677764 599
Q ss_pred HHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHH
Q 000522 1315 RDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQ 1391 (1445)
Q Consensus 1315 ReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~ 1391 (1445)
++|+.... ..++++..+. ..+.++.+|++.........||+|||||++||||++.+|+||||||||++||++
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~gl~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~ 187 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKR-----LDELSELLDLEELLDTPVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVV 187 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHH-----HHHHHHHcCChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHH
Confidence 99985422 1222222221 112233335554444455679999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeec
Q 000522 1392 TASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1392 te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G 1437 (1445)
+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 188 ~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 188 AQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999998764 37899999999998866 8999999999998875
No 361
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=5.2e-36 Score=336.63 Aligned_cols=192 Identities=28% Similarity=0.369 Sum_probs=160.3
Q ss_pred ceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCcccC-ccHHHhc
Q 000522 1240 LHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFE-GSLRDNL 1318 (1445)
Q Consensus 1240 L~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~-gTIReNL 1318 (1445)
|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+++||+|.+|. .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 589999999999999999999999999999999999999999999999876543 2489999999987 5999998
Q ss_pred CCC-----CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHH
Q 000522 1319 DPF-----HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTA 1393 (1445)
Q Consensus 1319 dp~-----~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te 1393 (1445)
... ...++++..+ .+.+.++.+|++.........||||||||++|||||+++|++|||||||++||+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRA-----IVEEHIALVGLTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHHhcccCCCHHHHHH-----HHHHHHHHcCCHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 642 1222222111 122334444665555556678999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1394 SILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1394 ~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++.+
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 201 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILE 201 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCcee
Confidence 99999998764 37899999999998875 89999999999999998644
No 362
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.4e-36 Score=336.21 Aligned_cols=198 Identities=28% Similarity=0.367 Sum_probs=164.0
Q ss_pred EEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000522 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1445)
Q Consensus 607 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1445)
+++|+++.|.. .++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~ 75 (235)
T cd03261 2 ELRGLTKSFGG------RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRL 75 (235)
T ss_pred eEEEEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHH
Confidence 57888998852 2359999999999999999999999999999999999999999998865
Q ss_pred --eEEEEcCCCCCCCc-cHHHHHhcCCC----CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 --SIAYVPQVPWILSG-TIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 --~i~y~~Q~p~l~~~-ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
.++|++|++.+++. |++||+.++.. .++ ++..++++.+++.... .....+||||||||
T Consensus 76 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qr 144 (235)
T cd03261 76 RRRMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAE-----------DLYPAELSGGMKKR 144 (235)
T ss_pred hcceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHH
Confidence 38999999998876 99999987532 222 2344555665554322 33456899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhH
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 819 (1445)
++||||+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 145 v~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 223 (235)
T cd03261 145 VALARALALDPELLLYDEPTAGLDPIASGVIDDL-IRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEE 223 (235)
T ss_pred HHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHH
Confidence 9999999999999999999999999999988876 332122 37899999999998775 99999999999999999888
Q ss_pred HHh
Q 000522 820 LAV 822 (1445)
Q Consensus 820 ~~~ 822 (1445)
+..
T Consensus 224 ~~~ 226 (235)
T cd03261 224 LRA 226 (235)
T ss_pred HcC
Confidence 753
No 363
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-33 Score=309.61 Aligned_cols=508 Identities=16% Similarity=0.144 Sum_probs=329.2
Q ss_pred HHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000522 269 LVRAICCAYGYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQGSGHLDGY-VLAIALGLTSILKSFFDTQYSFHLSKLK 347 (1445)
Q Consensus 269 l~~~l~~~~~~~~~~~~l~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~g~-~l~~~l~~~~~~~~~~~~~~~~~~~r~~ 347 (1445)
+...++|.++|+++....+.++..... ..++-.+-+++-+......++ .+.+++.+..++.+.. ......-++
T Consensus 3 ~ll~llr~nr~~~i~~~a~s~a~g~~g---~~lLa~in~al~e~~~~~~~~l~~f~~llllf~~ss~i---s~lg~t~~g 76 (546)
T COG4615 3 LLLLLLRQNRWPFISVMALSLASGALG---IGLLAFINQALIETADTSLLVLPEFLGLLLLFMVSSLI---SQLGLTTLG 76 (546)
T ss_pred hHHHHhcccccHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhhcccceeeHHHHHHHHHHHHHHHHH---HHHHHHHHH
Confidence 345788899999888777666554433 333333333433311111111 1222222222222221 112223333
Q ss_pred HHHHHHHHHHHHHHHhcCCccccCCCChhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHH
Q 000522 348 LKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANSFHDAWSLPFQIGVALYLLYTQVKFAFVSGLAI 427 (1445)
Q Consensus 348 ~~ir~~L~~~iy~K~L~l~~~~~~~~~~g~i~nlms~D~~~i~~~~~~~~~~~~~p~~i~i~~~lL~~~lg~a~l~~~~~ 427 (1445)
..+-..+...+-+|.+.-+.....+..++.++.-++.|+..|...+..+.++.-+.+-+..+...|++.-+..++..++.
T Consensus 77 q~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV~ 156 (546)
T COG4615 77 QHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVVW 156 (546)
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 33444444555567777777666667778899999999999997777777666555555555555555555666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000522 428 TILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWE--QIFSSWLMKTRSSEVKHLSTRKYLDAWC- 504 (1445)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~R~~~~~e~L~~ik~IK~~g~e--~~~~~~i~~~R~~El~~~~~~~~~~~~~- 504 (1445)
+++.+..+.+...+..++.....+.-|+-.+..+.++.|-|.+|+..-- ..+.+.+... .+|.+. +..+...+.
T Consensus 157 ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~-a~~~r~--~~~~~n~f~~ 233 (546)
T COG4615 157 IVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPD-AQEYRH--HIIRANTFHL 233 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcc-hHHHHh--hhhhhhHHHH
Confidence 6777777888888888888888889999999999999999999986522 1122211110 111111 111111121
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCC-CHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhhh
Q 000522 505 VFFWATTPTLFSLFTFGLFALMGHQL-DAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKHELE 583 (1445)
Q Consensus 505 ~~~~~~~~~~~~~~~f~~~~~~~~~L-t~~~~ft~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~Ri~~fL~~~e~~~~~~ 583 (1445)
....+....+..++....|+...-.. +...+.|....+-.++.|+.++...+|.+..|.++++||.++=..|+..+- .
T Consensus 234 la~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~-~ 312 (546)
T COG4615 234 LAVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADF-P 312 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccC-C
Confidence 11122223333444444444322222 223444544556678899999999999999999999999997664443221 0
Q ss_pred hhcCCCCcccCCCccCCCCCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccC
Q 000522 584 QAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML 663 (1445)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~ 663 (1445)
..... ++-..++++|+.|+|... ++-+..||++|++||++.|+|.||||||||++.++|.++|
T Consensus 313 ~~q~~------------p~~~~lelrnvrfay~~~-----~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~P 375 (546)
T COG4615 313 RPQAF------------PDWKTLELRNVRFAYQDN-----AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQP 375 (546)
T ss_pred CCCcC------------CcccceeeeeeeeccCcc-----cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCC
Confidence 00001 223568999999999643 2458999999999999999999999999999999999999
Q ss_pred CCeEEEEcCe-------------EEEEcCCCCCCCccHHHHHhcCCC-CChhhHHHHHHHhcchHHHhhccCCCcccccC
Q 000522 664 THGSIHASGS-------------IAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAYIGE 729 (1445)
Q Consensus 664 ~~G~i~~~~~-------------i~y~~Q~p~l~~~ti~~nI~~g~~-~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~ 729 (1445)
++|+|.++|+ ++-|+-+-|+|+. .+.++. -+++..++-++.-.+.... .+.+|.-+
T Consensus 376 qsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~-----ll~~e~~as~q~i~~~LqrLel~~kt-sl~d~~fs---- 445 (546)
T COG4615 376 QSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQ-----LLGPEGKASPQLIEKWLQRLELAHKT-SLNDGRFS---- 445 (546)
T ss_pred CCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHh-----hhCCccCCChHHHHHHHHHHHHhhhh-cccCCccc----
Confidence 9999999983 2333444454432 222222 3455555555554444332 22233222
Q ss_pred CCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCC
Q 000522 730 KGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKG 809 (1445)
Q Consensus 730 ~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G 809 (1445)
...||-|||.|+|+--|+..+.|||+|||=-+-=||+-++..++..+-.....|||++-||||-.+...|||++.+++|
T Consensus 446 -~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G 524 (546)
T COG4615 446 -NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNG 524 (546)
T ss_pred -ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcC
Confidence 2479999999999999999999999999999999999888877764322144699999999999999999999999999
Q ss_pred EEEEe
Q 000522 810 QVKWI 814 (1445)
Q Consensus 810 ~i~~~ 814 (1445)
++++.
T Consensus 525 ~~~e~ 529 (546)
T COG4615 525 QLSEL 529 (546)
T ss_pred ceeec
Confidence 99864
No 364
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=8.4e-36 Score=338.66 Aligned_cols=207 Identities=24% Similarity=0.365 Sum_probs=172.8
Q ss_pred EEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEE
Q 000522 1224 EFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVV 1303 (1445)
Q Consensus 1224 ~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~V 1303 (1445)
+++||+++ .+|+|+||+|++||++||+|+||||||||+++|.|++++ +|+|.+||.++...+...+|+.++|+
T Consensus 2 ~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~~-~G~i~~~g~~i~~~~~~~~~~~i~~v 74 (248)
T PRK03695 2 QLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLPG-SGSIQFAGQPLEAWSAAELARHRAYL 74 (248)
T ss_pred cccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC-CeEEEECCEecCcCCHHHHhhheEEe
Confidence 56788774 289999999999999999999999999999999999964 99999999999988888888899999
Q ss_pred cCCCcc-cCccHHHhcCCCCCC--ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhcc------
Q 000522 1304 PQSPFL-FEGSLRDNLDPFHMN--DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLK------ 1374 (1445)
Q Consensus 1304 pQdp~l-F~gTIReNLdp~~~~--sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr------ 1374 (1445)
||++.+ +..|+++|+..+... +.++. .....+.++.+|++.........||+|||||++||||+++
T Consensus 75 ~q~~~~~~~~tv~~nl~~~~~~~~~~~~~-----~~~~~~~l~~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~~~~~~ 149 (248)
T PRK03695 75 SQQQTPPFAMPVFQYLTLHQPDKTRTEAV-----ASALNEVAEALGLDDKLGRSVNQLSGGEWQRVRLAAVVLQVWPDIN 149 (248)
T ss_pred cccCccCCCccHHHHHHhcCccCCCcHHH-----HHHHHHHHHHcCCHhHhcCCcccCCHHHHHHHHHHHHHhccccccC
Confidence 999854 567999999764321 11111 1122344444566655666677899999999999999997
Q ss_pred -CCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCCC
Q 000522 1375 -SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1375 -~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+|++|||||||++||+.+.+.+.+.|++.. +++|||++||+++.+. .||+|++|++|++++.|++++.
T Consensus 150 p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 220 (248)
T PRK03695 150 PAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEV 220 (248)
T ss_pred CCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 679999999999999999999999998764 4789999999999775 4899999999999999987643
No 365
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.7e-36 Score=334.33 Aligned_cols=214 Identities=25% Similarity=0.425 Sum_probs=170.8
Q ss_pred EEEEEEEEEeCCCC--CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC-C----CCcEEEECCeeCCCCChHh
Q 000522 1223 IEFQNVTMRYKPSL--PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTP-I----CGGQILVDGLNIINTPVRD 1295 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~--~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~-~----~~G~I~IDG~di~~i~~~~ 1295 (1445)
++++|++..|.... ..+++||||+|++||.+||||.|||||||+.++++|+++ | .+|+|.+||.|+-+++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 58899999997543 469999999999999999999999999999999999998 3 5799999999999999875
Q ss_pred h---h-cceEEEcCCCcc-cCc--cHHHhc----CCCCCC-C----hHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCC
Q 000522 1296 L---R-GRFAVVPQSPFL-FEG--SLRDNL----DPFHMN-D----DLKIWSVLEKCHVKEEVEAVGLETFVKESGISFS 1359 (1445)
Q Consensus 1296 l---R-~~i~~VpQdp~l-F~g--TIReNL----dp~~~~-s----d~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LS 1359 (1445)
+ | +.|++|||||.- |+- ||.+-+ ...... + .++..+.|+.+++.+- +..+..-...||
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~------~~~~~~YPhelS 155 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDP------ERRLKSYPHELS 155 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCH------HHHHhhCCcccC
Confidence 4 3 479999999951 221 333322 111111 1 1123333444433221 124556677899
Q ss_pred hhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeee
Q 000522 1360 VGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHC 1436 (1445)
Q Consensus 1360 gGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~ 1436 (1445)
||||||+.||-|++.+|++||-||||++||..+.+.|.+.|++.. .+.|+|+|||++..+.. ||||+||.+|+|||.
T Consensus 156 GGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iVE~ 235 (316)
T COG0444 156 GGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIVEE 235 (316)
T ss_pred CcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEEEe
Confidence 999999999999999999999999999999999999999998765 49999999999998875 899999999999999
Q ss_pred cCCCCC
Q 000522 1437 GCAAAP 1442 (1445)
Q Consensus 1437 G~p~~~ 1442 (1445)
|+.++.
T Consensus 236 g~~~~i 241 (316)
T COG0444 236 GPVEEI 241 (316)
T ss_pred CCHHHH
Confidence 997654
No 366
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.6e-35 Score=351.85 Aligned_cols=203 Identities=26% Similarity=0.380 Sum_probs=170.9
Q ss_pred CceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------
Q 000522 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1445)
Q Consensus 603 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 672 (1445)
...++++|+++.|.. ..+|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|
T Consensus 12 ~~~L~l~~l~~~~~~------~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~ 85 (375)
T PRK09452 12 SPLVELRGISKSFDG------KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAEN 85 (375)
T ss_pred CceEEEEEEEEEECC------eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHH
Confidence 345899999999852 2359999999999999999999999999999999999999999999987
Q ss_pred -eEEEEcCCCCCCCc-cHHHHHhcCCCC---Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHH
Q 000522 673 -SIAYVPQVPWILSG-TIRDNILFGKNY---DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1445)
Q Consensus 673 -~i~y~~Q~p~l~~~-ti~~nI~~g~~~---~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~ 743 (1445)
.+|||+|++.+|.. ||+|||.|+... ++ ++.+++++..++....+. ...+|||||||||+
T Consensus 86 r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~p~~LSgGq~QRVa 154 (375)
T PRK09452 86 RHVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQR-----------KPHQLSGGQQQRVA 154 (375)
T ss_pred CCEEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHHH
Confidence 39999999999865 999999987532 22 244566666666544443 44589999999999
Q ss_pred HHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhh-hCCEEEEEeCCEEEEecCHhHHH
Q 000522 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLA 821 (1445)
Q Consensus 744 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~~~~~~ 821 (1445)
|||||+.+|+++|||||||+||+...+.+.+. +.... ..+.|+|+|||+.+.+. .||+|++|++|+|.+.|+++++.
T Consensus 155 LARaL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~ 233 (375)
T PRK09452 155 IARAVVNKPKVLLLDESLSALDYKLRKQMQNE-LKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIY 233 (375)
T ss_pred HHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999998888776 33211 23789999999999865 59999999999999999999986
Q ss_pred hc
Q 000522 822 VS 823 (1445)
Q Consensus 822 ~~ 823 (1445)
..
T Consensus 234 ~~ 235 (375)
T PRK09452 234 EE 235 (375)
T ss_pred hC
Confidence 54
No 367
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.5e-35 Score=350.68 Aligned_cols=201 Identities=29% Similarity=0.403 Sum_probs=169.8
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------e
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 673 (1445)
.++++|+++.|.. ..+|+|+||++++||+++|+|||||||||||++|+|..+|++|+|.++| .
T Consensus 4 ~l~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ 77 (353)
T TIGR03265 4 YLSIDNIRKRFGA------FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRD 77 (353)
T ss_pred EEEEEEEEEEeCC------eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCC
Confidence 4789999999853 2359999999999999999999999999999999999999999999986 4
Q ss_pred EEEEcCCCCCCC-ccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000522 674 IAYVPQVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1445)
Q Consensus 674 i~y~~Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 745 (1445)
+|||+|++-+|+ .||+|||.|+.. .+ .++.+++++..+|+... .....+|||||||||+||
T Consensus 78 ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRvaLA 146 (353)
T TIGR03265 78 YGIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSE-----------RKYPGQLSGGQQQRVALA 146 (353)
T ss_pred EEEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchh-----------hCChhhCCHHHHHHHHHH
Confidence 999999999996 599999998743 22 23455566666654332 355679999999999999
Q ss_pred HHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhh-hCCEEEEEeCCEEEEecCHhHHHhc
Q 000522 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 823 (1445)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~~~~~~~~ 823 (1445)
|||+.+|+++|||||||+||+.+.+++.+.+ ..... .+.|+|+|||+.+.+. .||+|++|++|++++.|+++++...
T Consensus 147 RaL~~~P~llLLDEP~s~LD~~~r~~l~~~L-~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 147 RALATSPGLLLLDEPLSALDARVREHLRTEI-RQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHH-HHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999888763 22112 3789999999999865 4999999999999999999998754
No 368
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=343.05 Aligned_cols=205 Identities=25% Similarity=0.381 Sum_probs=170.3
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|+++.|+.... ..+.+|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 2 i~~~~v~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 80 (288)
T PRK13643 2 IKFEKVNYTYQPNSP-FASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIK 80 (288)
T ss_pred EEEEEEEEEeCCCCc-ccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHH
Confidence 678999999964211 112469999999999999999999999999999999999999999999876
Q ss_pred ----eEEEEcCCC--CCCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000522 673 ----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1445)
Q Consensus 673 ----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQk 739 (1445)
.++||+|+| .+++.||.|||.|+.. .++ +++.++++..+|..++ ......+||||||
T Consensus 81 ~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~----------~~~~~~~LSgGqk 150 (288)
T PRK13643 81 PVRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEF----------WEKSPFELSGGQM 150 (288)
T ss_pred HHHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhh----------ccCCcccCCHHHH
Confidence 379999998 7888999999998742 222 3456666666664332 2345679999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhh-hCCEEEEEeCCEEEEecCHh
Q 000522 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1445)
Q Consensus 740 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~~~ 818 (1445)
||++||||++.+|+++||||||++||+.+.+.+.+. +..-..+++|+|++||+++.+. .||+|++|++|+++++|+++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~ 229 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQL-FESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPS 229 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999888875 3321234789999999999886 49999999999999999999
Q ss_pred HHHh
Q 000522 819 DLAV 822 (1445)
Q Consensus 819 ~~~~ 822 (1445)
++..
T Consensus 230 ~~~~ 233 (288)
T PRK13643 230 DVFQ 233 (288)
T ss_pred HHHc
Confidence 8754
No 369
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=369.82 Aligned_cols=214 Identities=26% Similarity=0.388 Sum_probs=180.6
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCeeCCCCChHh-hhc
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNIINTPVRD-LRG 1298 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~--~~G~I~IDG~di~~i~~~~-lR~ 1298 (1445)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+... .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 5899999999963 4699999999999999999999999999999999999996 8999999999998777654 467
Q ss_pred ceEEEcCCCcccCc-cHHHhcCCCCC------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000522 1299 RFAVVPQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1299 ~i~~VpQdp~lF~g-TIReNLdp~~~------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1445)
+++||||+|.+|.. |++||+.+... .+.++..+ .+.+.++.+|++........+||||||||++||||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgGqkqrv~la~a 157 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL-----RAQKLLAQLKLDINPATPVGNLGLGQQQLVEIAKA 157 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH-----HHHHHHHHcCCCCCcccchhhCCHHHHHHHHHHHH
Confidence 89999999988875 99999975421 11111111 12334444566555555566899999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|+.+|+|||||||||+||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|++++.
T Consensus 158 l~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 230 (506)
T PRK13549 158 LNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGM 230 (506)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccC
Confidence 999999999999999999999999999998763 47899999999999875 899999999999999998765
No 370
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=342.95 Aligned_cols=205 Identities=27% Similarity=0.419 Sum_probs=170.3
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|++++|+.... ...++|+|+||+|++||+++|+|+||||||||+++|+|+.+|++|+|.++|
T Consensus 3 l~~~~l~~~y~~~~~-~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 3 ITFQKVEHRYQYKTP-FERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEECCCCc-ccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 789999999964211 113469999999999999999999999999999999999999999998876
Q ss_pred ----eEEEEcCCC--CCCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000522 673 ----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1445)
Q Consensus 673 ----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQk 739 (1445)
.|+||+|+| .+++.||+|||.|+.. .+. ++.+++++.++|..++. .....+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~----------~~~~~~LSgGq~ 151 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELL----------ARSPFELSGGQM 151 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhh----------hCCcccCCHHHH
Confidence 389999998 5888899999998632 222 34566777777754332 345568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCH
Q 000522 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 817 (1445)
Q Consensus 740 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~ 817 (1445)
||++||||++.+|+++||||||++||+.+.+.+++. +..... .|.|+|++||+++.+.. ||+|++|++|++++.|++
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~-L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~ 230 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEM-FYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTP 230 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 999999999999999999999999999999988876 332112 37899999999998765 999999999999999999
Q ss_pred hHHHh
Q 000522 818 ADLAV 822 (1445)
Q Consensus 818 ~~~~~ 822 (1445)
+++..
T Consensus 231 ~~~~~ 235 (290)
T PRK13634 231 REIFA 235 (290)
T ss_pred HHHhc
Confidence 88754
No 371
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=341.65 Aligned_cols=207 Identities=28% Similarity=0.441 Sum_probs=169.9
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|+.... ..+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13637 2 SIKIENLTHIYMEGTP-FEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSD 80 (287)
T ss_pred EEEEEEEEEECCCCCc-cccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHH
Confidence 4789999999964211 113469999999999999999999999999999999999999999998865
Q ss_pred ---eEEEEcCCC--CCCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHH
Q 000522 673 ---SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 740 (1445)
Q Consensus 673 ---~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkq 740 (1445)
.||||+|+| .+++.|++|||.|+.. .++ ++.+++++.++|.. .+........|||||||
T Consensus 81 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------~~~~~~~~~~LSgGq~q 151 (287)
T PRK13637 81 IRKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDY---------EDYKDKSPFELSGGQKR 151 (287)
T ss_pred HhhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCc---------hhhccCCcccCCHHHHH
Confidence 389999998 5778999999998642 232 23455666666641 11234566799999999
Q ss_pred HHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhh-hCCEEEEEeCCEEEEecCHh
Q 000522 741 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1445)
Q Consensus 741 Rv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~~~ 818 (1445)
|++||||++.+|+++||||||++||+.+.+.+++. +..... .++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 152 rv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~ 230 (287)
T PRK13637 152 RVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNK-IKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPR 230 (287)
T ss_pred HHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999988876 333122 3789999999999875 59999999999999999998
Q ss_pred HHHh
Q 000522 819 DLAV 822 (1445)
Q Consensus 819 ~~~~ 822 (1445)
++..
T Consensus 231 ~~~~ 234 (287)
T PRK13637 231 EVFK 234 (287)
T ss_pred HHHh
Confidence 8754
No 372
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=3.6e-35 Score=311.46 Aligned_cols=159 Identities=32% Similarity=0.505 Sum_probs=148.1
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCCh-HhhhcceE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRFA 1301 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i~ 1301 (1445)
|+++|++++|+. .++++|+||+|++||+++|+|++|||||||+++|.|+++|++|+|.+||.++...+. +..|++++
T Consensus 1 l~~~~l~~~~~~--~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGG--VKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 478999999964 369999999999999999999999999999999999999999999999999988875 45678899
Q ss_pred EEcCCCcccCccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000522 1302 VVPQSPFLFEGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCL 1381 (1445)
Q Consensus 1302 ~VpQdp~lF~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1381 (1445)
++|| ||+|||||++||||++++|++++|
T Consensus 79 ~~~q----------------------------------------------------LS~G~~qrl~laral~~~p~illl 106 (163)
T cd03216 79 MVYQ----------------------------------------------------LSVGERQMVEIARALARNARLLIL 106 (163)
T ss_pred EEEe----------------------------------------------------cCHHHHHHHHHHHHHhcCCCEEEE
Confidence 9999 999999999999999999999999
Q ss_pred eccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEee
Q 000522 1382 DECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPH 1435 (1445)
Q Consensus 1382 DEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE 1435 (1445)
||||++||.++.+.+.+.|++.. ++.|+|+++|+++.+.. ||++++|++|++++
T Consensus 107 DEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 107 DEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred ECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 99999999999999999998763 48899999999998865 89999999999976
No 373
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=340.46 Aligned_cols=204 Identities=29% Similarity=0.401 Sum_probs=170.4
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|+.... .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (279)
T PRK13650 4 IIEVKNLTFKYKEDQE---KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIR 80 (279)
T ss_pred eEEEEeEEEEcCCCCc---CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHH
Confidence 4789999999964211 2369999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCCC--CCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000522 673 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1445)
Q Consensus 673 -~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv 742 (1445)
.++|++|+|. ++..||+|||.|+.. .++ ++..++++..+|+...+ ....+||||||||+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qrv 149 (279)
T PRK13650 81 HKIGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKE-----------REPARLSGGQKQRV 149 (279)
T ss_pred hhceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHH
Confidence 4899999984 566799999998742 232 34566777777754333 34468999999999
Q ss_pred HHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHH
Q 000522 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 821 (1445)
Q Consensus 743 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~ 821 (1445)
+||||++.+|+++||||||++||+.+.+.+++. +..... .|+|+|++||+++.+..||+|++|++|+++..|+++++.
T Consensus 150 ~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13650 150 AIAGAVAMRPKIIILDEATSMLDPEGRLELIKT-IKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELF 228 (279)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999998888875 333122 378999999999998789999999999999999998875
Q ss_pred hc
Q 000522 822 VS 823 (1445)
Q Consensus 822 ~~ 823 (1445)
..
T Consensus 229 ~~ 230 (279)
T PRK13650 229 SR 230 (279)
T ss_pred cC
Confidence 43
No 374
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=341.23 Aligned_cols=206 Identities=23% Similarity=0.389 Sum_probs=168.4
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|+.... ...++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (286)
T PRK13646 2 TIRFDNVSYTYQKGTP-YEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYI 80 (286)
T ss_pred EEEEEEEEEEECCCCc-cccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 4789999999964221 113469999999999999999999999999999999999999999998875
Q ss_pred -----eEEEEcCCC--CCCCccHHHHHhcCCC---CChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000522 673 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1445)
Q Consensus 673 -----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQ 738 (1445)
.||||+|+| .+++.|++|||.|+.. ++.+ +..+.++.++|..+. .+..+.+|||||
T Consensus 81 ~~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq 150 (286)
T PRK13646 81 RPVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDV----------MSQSPFQMSGGQ 150 (286)
T ss_pred HHHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh----------hhCCcccCCHHH
Confidence 379999998 5888899999998632 2322 234455555553221 235667999999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhh-hCCEEEEEeCCEEEEecC
Q 000522 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGS 816 (1445)
Q Consensus 739 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~ 816 (1445)
|||++||||++.+|+++||||||++||+.+.+.+.+. +.... ..|+|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 151 ~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~ 229 (286)
T PRK13646 151 MRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRL-LKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTS 229 (286)
T ss_pred HHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999999988875 33211 24789999999999876 599999999999999999
Q ss_pred HhHHHh
Q 000522 817 SADLAV 822 (1445)
Q Consensus 817 ~~~~~~ 822 (1445)
++++..
T Consensus 230 ~~~~~~ 235 (286)
T PRK13646 230 PKELFK 235 (286)
T ss_pred HHHHHh
Confidence 988754
No 375
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.9e-35 Score=332.02 Aligned_cols=197 Identities=28% Similarity=0.394 Sum_probs=162.5
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCc-----cCCCeEEEEcC--------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM-----MLTHGSIHASG-------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~-----~~~~G~i~~~~-------- 672 (1445)
++++|+++.|.. +++|+|+||++++||+++|+|+||||||||+++|+|.+ +|++|+|.++|
T Consensus 1 i~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~ 74 (227)
T cd03260 1 IELRDLNVYYGD------KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDV 74 (227)
T ss_pred CEEEEEEEEcCC------ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcch
Confidence 357889998853 23599999999999999999999999999999999999 99999998865
Q ss_pred -------eEEEEcCCCCCCCccHHHHHhcCCCC----C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchH
Q 000522 673 -------SIAYVPQVPWILSGTIRDNILFGKNY----D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1445)
Q Consensus 673 -------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGG 737 (1445)
.++|++|++.+++.|++||+.++... + +++..++++.+++...+...++ +.+||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG 145 (227)
T cd03260 75 DVLELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGG 145 (227)
T ss_pred HHHHHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHH
Confidence 38999999998878999999875321 1 2344556666666543332211 4689999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecC
Q 000522 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 816 (1445)
Q Consensus 738 QkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~ 816 (1445)
||||++||||++.+|++++|||||++||+.+.+.+++. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 146 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~ 223 (227)
T cd03260 146 QQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEEL-IAE-LKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGP 223 (227)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecC
Confidence 99999999999999999999999999999999988876 333 3333899999999998765 99999999999999988
Q ss_pred HhH
Q 000522 817 SAD 819 (1445)
Q Consensus 817 ~~~ 819 (1445)
+++
T Consensus 224 ~~~ 226 (227)
T cd03260 224 TEQ 226 (227)
T ss_pred ccc
Confidence 654
No 376
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.4e-35 Score=347.57 Aligned_cols=201 Identities=32% Similarity=0.442 Sum_probs=168.1
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------e
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 673 (1445)
.++++|+++.|.. ..+|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 2 ~L~i~~l~~~~~~------~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ 75 (353)
T PRK10851 2 SIEIANIKKSFGR------TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRK 75 (353)
T ss_pred EEEEEEEEEEeCC------eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCC
Confidence 3678999998853 2359999999999999999999999999999999999999999999976 4
Q ss_pred EEEEcCCCCCCCc-cHHHHHhcCCCC-------Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 674 IAYVPQVPWILSG-TIRDNILFGKNY-------DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 674 i~y~~Q~p~l~~~-ti~~nI~~g~~~-------~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
++||+|++.+++. |++|||.|+... +. ++.++.++..+|.... ......||||||||
T Consensus 76 i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LSgGq~QR 144 (353)
T PRK10851 76 VGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLA-----------DRYPAQLSGGQKQR 144 (353)
T ss_pred EEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHH
Confidence 9999999999975 999999987431 21 2344556666554322 34556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhH
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 819 (1445)
|+||||++.+|+++|||||||+||+.+.+.+.+. +..... .+.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 145 valArAL~~~P~llLLDEP~s~LD~~~r~~l~~~-L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~ 223 (353)
T PRK10851 145 VALARALAVEPQILLLDEPFGALDAQVRKELRRW-LRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQ 223 (353)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999888876 332122 36899999999998665 99999999999999999999
Q ss_pred HHhc
Q 000522 820 LAVS 823 (1445)
Q Consensus 820 ~~~~ 823 (1445)
+...
T Consensus 224 i~~~ 227 (353)
T PRK10851 224 VWRE 227 (353)
T ss_pred HHhC
Confidence 8654
No 377
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.6e-35 Score=348.83 Aligned_cols=202 Identities=27% Similarity=0.383 Sum_probs=170.3
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCC--eEEEEcC---------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH--GSIHASG--------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~--G~i~~~~--------- 672 (1445)
+.++++|+++.|.. . .+|+|+||++++||+++|+|||||||||||++|+|+.+|++ |+|.++|
T Consensus 4 ~~l~~~~l~~~~~~---~---~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~ 77 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---N---TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPH 77 (362)
T ss_pred eEEEEEEEEEEECC---e---EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHH
Confidence 45889999999853 2 35999999999999999999999999999999999999999 9999876
Q ss_pred --eEEEEcCCCCCCCc-cHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000522 673 --SIAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1445)
Q Consensus 673 --~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv 742 (1445)
.|+||+|++.+|.. ||+|||.|+.. .+ +++.+++++..+|+...+ ....+|||||||||
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~-----------~~~~~LSgGq~QRv 146 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAA-----------HLPAQLSGGMQQRI 146 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhh-----------CChhhCCHHHHHHH
Confidence 49999999999865 99999998642 22 134556666666654333 44568999999999
Q ss_pred HHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccC--CceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhH
Q 000522 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML--QKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1445)
Q Consensus 743 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~--~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 819 (1445)
+|||||..+|+++|||||||+||+...+.+.+.+ .....+ |.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 147 aLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l-~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~ 225 (362)
T TIGR03258 147 AIARAIAIEPDVLLLDEPLSALDANIRANMREEI-AALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQA 225 (362)
T ss_pred HHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHH-HHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999998888763 321222 6899999999998655 99999999999999999999
Q ss_pred HHhc
Q 000522 820 LAVS 823 (1445)
Q Consensus 820 ~~~~ 823 (1445)
+...
T Consensus 226 ~~~~ 229 (362)
T TIGR03258 226 LYDA 229 (362)
T ss_pred HHhC
Confidence 8654
No 378
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-35 Score=341.39 Aligned_cols=206 Identities=22% Similarity=0.333 Sum_probs=169.0
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|+.... ....+|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~y~~~~~-~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (305)
T PRK13651 2 QIKVKNIVKIFNKKLP-TELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEK 80 (305)
T ss_pred EEEEEEEEEEECCCCC-ccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccc
Confidence 3788999999964321 112469999999999999999999999999999999999999999998752
Q ss_pred -------------------------eEEEEcCCC--CCCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhh
Q 000522 673 -------------------------SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISL 718 (1445)
Q Consensus 673 -------------------------~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~ 718 (1445)
.||||+|+| .+++.||+|||.|+.. .++ ++..++++.++|..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-- 158 (305)
T PRK13651 81 EKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESY-- 158 (305)
T ss_pred cccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhh--
Confidence 379999987 5778899999998742 222 3445666666664322
Q ss_pred ccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhh
Q 000522 719 MVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS 798 (1445)
Q Consensus 719 ~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~ 798 (1445)
.+....+||||||||++||||++.+|+++||||||++||+...+.+.+. +.....+|+|+|++||+++.+.
T Consensus 159 --------~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivtHd~~~~~ 229 (305)
T PRK13651 159 --------LQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEI-FDNLNKQGKTIILVTHDLDNVL 229 (305)
T ss_pred --------hhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHCCCEEEEEeeCHHHHH
Confidence 2355679999999999999999999999999999999999998888875 3321234789999999999865
Q ss_pred -hCCEEEEEeCCEEEEecCHhHHHh
Q 000522 799 -AADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 799 -~~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
.||+|++|++|++++.|+++++..
T Consensus 230 ~~adrv~vl~~G~i~~~g~~~~~~~ 254 (305)
T PRK13651 230 EWTKRTIFFKDGKIIKDGDTYDILS 254 (305)
T ss_pred HhCCEEEEEECCEEEEECCHHHHhc
Confidence 599999999999999999988754
No 379
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.4e-35 Score=325.24 Aligned_cols=194 Identities=25% Similarity=0.332 Sum_probs=165.6
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.... ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 789999999964 46999999999999999999999999999999999999999999999999987654 456789999
Q ss_pred EcCCCcccC-ccHHHhcCCCCC----CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1303 VPQSPFLFE-GSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1303 VpQdp~lF~-gTIReNLdp~~~----~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
++|++.+++ .|++||+..... .+++++.++++..++.+ ........||+|||||++||||++++|+
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~---------~~~~~~~~LS~G~~qrl~la~al~~~p~ 149 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAG---------FEDVPVRQLSAGQQRRVALARLWLTRAP 149 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHH---------HhhCChhhcCHHHHHHHHHHHHHhcCCC
Confidence 999998886 599999964321 23345555666655543 3344455799999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhhc-CEEEEE
Q 000522 1378 VLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNM-DEILIL 1428 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~-DrI~Vl 1428 (1445)
||+|||||++||+++.+.+.+.|++.. +++|+|+|||+++.+..| +|++++
T Consensus 150 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 150 LWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 999999999999999999999998763 478999999999999776 788776
No 380
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-35 Score=331.25 Aligned_cols=199 Identities=33% Similarity=0.455 Sum_probs=164.7
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------e
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 673 (1445)
.++++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .
T Consensus 2 ~l~~~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 75 (239)
T cd03296 2 SIEVRNVSKRFGD---F---VALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERN 75 (239)
T ss_pred EEEEEeEEEEECC---E---EeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccc
Confidence 3678999999853 2 359999999999999999999999999999999999999999999875 4
Q ss_pred EEEEcCCCCCCC-ccHHHHHhcCCCC-------Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 674 IAYVPQVPWILS-GTIRDNILFGKNY-------DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 674 i~y~~Q~p~l~~-~ti~~nI~~g~~~-------~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
++|++|+|.++. .|++||+.++... +. ++.++.++.+++... ......+||||||||
T Consensus 76 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr 144 (239)
T cd03296 76 VGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWL-----------ADRYPAQLSGGQRQR 144 (239)
T ss_pred eEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhh-----------hhcChhhCCHHHHHH
Confidence 899999999886 5999999876321 11 223444555555322 234556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhH
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 819 (1445)
++||||++.+|+++||||||++||+++.+.+.+. +..... +++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 145 l~la~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 223 (239)
T cd03296 145 VALARALAVEPKVLLLDEPFGALDAKVRKELRRW-LRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDE 223 (239)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHH
Confidence 9999999999999999999999999999988875 332122 37899999999998765 99999999999999999888
Q ss_pred HH
Q 000522 820 LA 821 (1445)
Q Consensus 820 ~~ 821 (1445)
+.
T Consensus 224 ~~ 225 (239)
T cd03296 224 VY 225 (239)
T ss_pred Hh
Confidence 74
No 381
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=5.4e-35 Score=365.76 Aligned_cols=213 Identities=24% Similarity=0.391 Sum_probs=180.0
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhh-cce
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLR-GRF 1300 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR-~~i 1300 (1445)
.|+++|++++|+. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+....+ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999964 4699999999999999999999999999999999999999999999999999887776655 469
Q ss_pred EEEcCCCcccCc-cHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1445)
+|+||++.+|.+ |+++|+.+.....+ +..+ .+.+.++.+|++.........||||||||++|||||+++|+||
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~-~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p~ll 162 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQ-ASMQ-----KMKQLLAALGCQLDLDSSAGSLEVADRQIVEILRGLMRDSRIL 162 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccch-HHHH-----HHHHHHHHcCCCccccCChhhCCHHHHHHHHHHHHHHcCCCEE
Confidence 999999998876 99999975432111 1111 1223344446654455555689999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1380 CLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1380 lLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|++++.|++++.
T Consensus 163 lLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (510)
T PRK15439 163 ILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADL 227 (510)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHc
Confidence 9999999999999999999998763 47899999999999865 899999999999999988653
No 382
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-35 Score=350.43 Aligned_cols=200 Identities=28% Similarity=0.410 Sum_probs=168.6
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------e
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------S 673 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~ 673 (1445)
.++++|+++.|.. ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 3 ~l~i~~l~~~~~~------~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~ 76 (369)
T PRK11000 3 SVTLRNVTKAYGD------VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERG 76 (369)
T ss_pred EEEEEEEEEEeCC------eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCC
Confidence 3789999999852 2359999999999999999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCCc-cHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000522 674 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1445)
Q Consensus 674 i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 745 (1445)
|+||+|++.++.. ||+|||.|+.. .+ .++.+++++.+++.... .....+|||||||||+||
T Consensus 77 i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-----------~~~~~~LSgGq~QRvaLA 145 (369)
T PRK11000 77 VGMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLL-----------DRKPKALSGGQRQRVAIG 145 (369)
T ss_pred EEEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhh-----------cCChhhCCHHHHHHHHHH
Confidence 9999999999865 99999998643 22 23456667777665433 334468999999999999
Q ss_pred HHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHHh
Q 000522 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
||++.+|+++|||||||+||+...+.+.+. +..... .+.|+|++||+++.+.. ||+|++|++|++.+.|+++++..
T Consensus 146 raL~~~P~lLLLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~ 223 (369)
T PRK11000 146 RTLVAEPSVFLLDEPLSNLDAALRVQMRIE-ISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYH 223 (369)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999888775 332122 37899999999998765 99999999999999999998864
No 383
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=7e-35 Score=322.57 Aligned_cols=189 Identities=29% Similarity=0.438 Sum_probs=161.3
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1445)
..++++|+++.|+... .++++|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~~~----~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 5 GEIEVENLSVRYAPDL----PPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CeEEEEEEEEEeCCCC----cccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 4689999999986321 2359999999999999999999999999999999999999999999875
Q ss_pred --eEEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHcc
Q 000522 673 --SIAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 750 (1445)
Q Consensus 673 --~i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~ 750 (1445)
.|+||+|+|.++++|++||+.+...++++. +.+++. ++++...||||||||++||||++.
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~---~~~~l~---------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEE---IYGALR---------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHH---HHHHhh---------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 499999999999999999997654443322 222221 345778999999999999999999
Q ss_pred CCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecC
Q 000522 751 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 816 (1445)
Q Consensus 751 ~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~ 816 (1445)
+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+.+.+..+|++++|++|++.+.|+
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKT-IRE-EFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHH-HHH-hcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 9999999999999999998888776 333 345789999999999988899999999999988775
No 384
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=4.6e-35 Score=366.22 Aligned_cols=214 Identities=20% Similarity=0.287 Sum_probs=178.9
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHh-hhcce
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRD-LRGRF 1300 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~-lR~~i 1300 (1445)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999963 46999999999999999999999999999999999999999999999999997665544 36789
Q ss_pred EEEcCCCcccCc-cHHHhcCCCCC-------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~~-------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
+|+||++.+|.. |++||+.+... .+..+..+ ...+.++.+|++........+||||||||++|||||
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~la~al 156 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYA-----EADKLLARLNLRFSSDKLVGELSIGEQQMVEIAKVL 156 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHH-----HHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHH
Confidence 999999988875 99999975321 11111111 123334444665544555568999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+.+|++|||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|++++.
T Consensus 157 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (501)
T PRK10762 157 SFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADL 228 (501)
T ss_pred hcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcC
Confidence 99999999999999999999999999998753 47899999999999875 799999999999999988764
No 385
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-35 Score=367.65 Aligned_cols=214 Identities=19% Similarity=0.302 Sum_probs=179.8
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhh-hcce
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRF 1300 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i 1300 (1445)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.... |+++
T Consensus 5 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 4899999999964 369999999999999999999999999999999999999999999999999988776554 4679
Q ss_pred EEEcCCCcccCc-cHHHhcCCCCC-------C---ChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHH
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFHM-------N---DDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLA 1369 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~~-------~---sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LA 1369 (1445)
+||||++.+|.+ |+++|+..... . +.++..+ .+.+.++.+|++........+||||||||++||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~LSgG~~qrv~ia 157 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRV-----RAAMMLLRVGLKVDLDEKVANLSISHKQMLEIA 157 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHH-----HHHHHHHHcCCCCCcccchhhCCHHHHHHHHHH
Confidence 999999998876 99999964311 0 1111111 123334444665445555568999999999999
Q ss_pred HHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1370 RALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1370 RALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.+ ||+|++|++|++++.|+|++.
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 232 (510)
T PRK09700 158 KTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDV 232 (510)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhC
Confidence 99999999999999999999999999999998753 47999999999999875 899999999999999998764
No 386
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.5e-34 Score=372.92 Aligned_cols=214 Identities=23% Similarity=0.319 Sum_probs=147.7
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHh------cCC---CCCCcEEEECC-------
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALF------RLT---PICGGQILVDG------- 1285 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~------rl~---~~~~G~I~IDG------- 1285 (1445)
.++++|++. ..|+|+|++|++||.+||+|.+|||||||+.-++ ++. .+..+...++|
T Consensus 614 ~L~v~~l~~-------~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 686 (943)
T PRK00349 614 FLKLKGARE-------NNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKV 686 (943)
T ss_pred eEEecCCcc-------CCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCce
Confidence 477888752 2599999999999999999999999999998764 211 12233333333
Q ss_pred -----eeCCCCC----------hHhhhcceE---------EEcCCCcccC-----------ccHHHhcCCCCC-------
Q 000522 1286 -----LNIINTP----------VRDLRGRFA---------VVPQSPFLFE-----------GSLRDNLDPFHM------- 1323 (1445)
Q Consensus 1286 -----~di~~i~----------~~~lR~~i~---------~VpQdp~lF~-----------gTIReNLdp~~~------- 1323 (1445)
.++..-+ .+.+|.-.+ +-++.-.+.+ |+++.|+.+...
T Consensus 687 v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 766 (943)
T PRK00349 687 IDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDV 766 (943)
T ss_pred EEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCcc
Confidence 3332111 123333332 2222222221 455555543211
Q ss_pred -----C------------ChH-----HHHHHHHHc----cH---HHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHhc
Q 000522 1324 -----N------------DDL-----KIWSVLEKC----HV---KEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1373 (1445)
Q Consensus 1324 -----~------------sd~-----ei~~aL~~~----~l---~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL 1373 (1445)
+ +-. .+.++++-. ++ .+.++.+||+. .++.....||||||||+.|||||+
T Consensus 767 C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~LAraL~ 846 (943)
T PRK00349 767 CKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKIARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAKELS 846 (943)
T ss_pred ccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhhhHHHHHHHHCCCCcccccCCcccCCHHHHHHHHHHHHHh
Confidence 0 101 122222221 11 12333448875 467777899999999999999999
Q ss_pred cCC---CEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhhcCEEEEE------eCCeEeeecCCCCC
Q 000522 1374 KSS---KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL------DHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1374 r~~---~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl------~~G~vvE~G~p~~~ 1442 (1445)
++| +++||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|++.
T Consensus 847 ~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el 925 (943)
T PRK00349 847 KRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIKTADWIIDLGPEGGDGGGEIVATGTPEEV 925 (943)
T ss_pred cCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEecCCcCCCCCEEEEeCCHHHH
Confidence 999 9999999999999999999999998764 589999999999999999999999 79999999998754
No 387
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-35 Score=337.73 Aligned_cols=199 Identities=29% Similarity=0.391 Sum_probs=167.8
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|+.. .++|+|+||++++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~-----~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 78 (274)
T PRK13647 4 IIEVEDLHFRYKDG-----TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVR 78 (274)
T ss_pred eEEEEEEEEEeCCC-----CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHH
Confidence 47899999998521 2359999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCC--CCCCccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000522 673 -SIAYVPQVP--WILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1445)
Q Consensus 673 -~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv 742 (1445)
.++|++|+| .+++.|++||+.|+.. .+ ++++.++++.++|...... ....||||||||+
T Consensus 79 ~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LSgG~~qrv 147 (274)
T PRK13647 79 SKVGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDK-----------PPYHLSYGQKKRV 147 (274)
T ss_pred hhEEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcC-----------ChhhCCHHHHHHH
Confidence 489999998 5788899999998632 22 2345667777777544332 3358999999999
Q ss_pred HHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhh-hCCEEEEEeCCEEEEecCHhHH
Q 000522 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADL 820 (1445)
Q Consensus 743 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~~~~~ 820 (1445)
+||||+..+|+++||||||++||+.+.+.+++. +.....+++|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 148 ~laraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 148 AIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEI-LDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 999999999999999999999999999988876 3331234789999999999985 5999999999999999998654
No 388
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-35 Score=332.13 Aligned_cols=203 Identities=22% Similarity=0.291 Sum_probs=170.3
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCcc---CCCeEEEEcC---------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM---LTHGSIHASG--------- 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~---~~~G~i~~~~--------- 672 (1445)
.++++|+++.|+. +++|+|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 2 ~~~~~~l~~~~~~------~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~ 75 (246)
T PRK14269 2 IAKTTNLNLFYGK------KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVV 75 (246)
T ss_pred ceeeeeeEEEECC------EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHH
Confidence 4678999999852 235999999999999999999999999999999999974 6899999876
Q ss_pred ----eEEEEcCCCCCCCccHHHHHhcCCCC---------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000522 673 ----SIAYVPQVPWILSGTIRDNILFGKNY---------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1445)
Q Consensus 673 ----~i~y~~Q~p~l~~~ti~~nI~~g~~~---------~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQk 739 (1445)
.++|++|+|.+++.|++||+.++... ++++..++++.+++...+.. ...+.+.+||||||
T Consensus 76 ~~~~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~ 148 (246)
T PRK14269 76 ALRKNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQ 148 (246)
T ss_pred HHhhhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHH
Confidence 48999999999999999999875321 12245667777777654432 23456789999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHh
Q 000522 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 818 (1445)
Q Consensus 740 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~ 818 (1445)
||++||||++++|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|+.+
T Consensus 149 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 226 (246)
T PRK14269 149 QRLCIARALAIKPKLLLLDEPTSALDPISSGVIEEL-LKE-LSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESK 226 (246)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999998888776 433 3457899999999998865 9999999999999999988
Q ss_pred HHHh
Q 000522 819 DLAV 822 (1445)
Q Consensus 819 ~~~~ 822 (1445)
++..
T Consensus 227 ~~~~ 230 (246)
T PRK14269 227 EFFE 230 (246)
T ss_pred HHHh
Confidence 8753
No 389
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=6.5e-35 Score=320.92 Aligned_cols=194 Identities=23% Similarity=0.336 Sum_probs=165.2
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|+++++
T Consensus 1 l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDG--RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCC--ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 478999999964 36999999999999999999999999999999999999999999999999987643 567899999
Q ss_pred EcCCCccc-CccHHHhcCCCCC-CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEE
Q 000522 1303 VPQSPFLF-EGSLRDNLDPFHM-NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLC 1380 (1445)
Q Consensus 1303 VpQdp~lF-~gTIReNLdp~~~-~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILl 1380 (1445)
+||++.++ ..|+++|+..... ..++++.++++..++.+. ......+||+|||||++||||++++|++||
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~---------~~~~~~~LS~G~~qrl~laral~~~p~lll 148 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGF---------EDRPVAQLSAGQQRRVALARLLLSGRPLWI 148 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhh---------hcCchhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 99999876 4799999975432 345566667777666533 223345799999999999999999999999
Q ss_pred EeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHh-hcCEEEEE
Q 000522 1381 LDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILIL 1428 (1445)
Q Consensus 1381 LDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl 1428 (1445)
|||||++||+.+.+.+.+.|++.. +++|+|+|||+...+. .||+++++
T Consensus 149 lDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 149 LDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 999999999999999999998753 4899999999877555 57999876
No 390
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-35 Score=326.63 Aligned_cols=191 Identities=30% Similarity=0.405 Sum_probs=158.3
Q ss_pred EEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------eEE
Q 000522 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SIA 675 (1445)
Q Consensus 607 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i~ 675 (1445)
+++|+++.|.. +++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .++
T Consensus 2 ~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~ 75 (213)
T cd03259 2 ELKGLSKTYGS------VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIG 75 (213)
T ss_pred eeeeeEEEeCC------eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEE
Confidence 57889998852 2359999999999999999999999999999999999999999999875 489
Q ss_pred EEcCCCCCCC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHH
Q 000522 676 YVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 747 (1445)
Q Consensus 676 y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARa 747 (1445)
|++|+|.++. .|++||+.++.. .+. ++.++.++.+++.... .....+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLL-----------NRYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhh-----------hcChhhCCHHHHHHHHHHHH
Confidence 9999998875 599999987532 121 2345566666665433 33446899999999999999
Q ss_pred HccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEEEEec
Q 000522 748 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 748 ly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1445)
+..+|++++|||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREE-LKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999988876 332122 37899999999998765 9999999999998754
No 391
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=7.4e-35 Score=326.97 Aligned_cols=205 Identities=27% Similarity=0.444 Sum_probs=173.8
Q ss_pred CCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC---------
Q 000522 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------- 672 (1445)
Q Consensus 602 ~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------- 672 (1445)
....++++|+++.|+.... .++|+|+||++++|++++|+||||||||||+++|+|+.+|++|+|.++|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~ 84 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPD---TLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHK 84 (226)
T ss_pred cCceEEEEEEEEEeCCCCC---CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHH
Confidence 4467899999999964211 2359999999999999999999999999999999999999999999876
Q ss_pred ----eEEEEcCCCCCCCccHHHHHhcCCCC-ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHH
Q 000522 673 ----SIAYVPQVPWILSGTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 747 (1445)
Q Consensus 673 ----~i~y~~Q~p~l~~~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARa 747 (1445)
.++|++|+|.+++.|++||+.++... ....+.+..+...+..-++.++.|.++..++...+|||||||||+||||
T Consensus 85 ~~~~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~lara 164 (226)
T cd03248 85 YLHSKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARA 164 (226)
T ss_pred HHHhhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHH
Confidence 38999999999999999999876432 2222333344455666778888788888899999999999999999999
Q ss_pred HccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEE
Q 000522 748 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQV 811 (1445)
Q Consensus 748 ly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i 811 (1445)
++++|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+..||+|++|++|++
T Consensus 165 l~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 165 LIRNPQVLILDEATSALDAESEQQVQQA-LYD-WPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999988876 333 3446899999999999988999999999874
No 392
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=328.67 Aligned_cols=201 Identities=26% Similarity=0.392 Sum_probs=168.9
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|.. . ++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~---~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 76 (241)
T PRK14250 3 EIEFKEVSYSSFG---K---EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLR 76 (241)
T ss_pred eEEEEeEEEEeCC---e---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhh
Confidence 4788999998842 2 359999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCCCCCCccHHHHHhcCCCC---ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHH
Q 000522 673 -SIAYVPQVPWILSGTIRDNILFGKNY---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAV 748 (1445)
Q Consensus 673 -~i~y~~Q~p~l~~~ti~~nI~~g~~~---~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARal 748 (1445)
.++|++|+|.+++.|++||+.++..+ +.++..+.++.+++..+. ......+||||||||++||||+
T Consensus 77 ~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~----------~~~~~~~LS~G~~qrl~la~al 146 (241)
T PRK14250 77 RKIGMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEY----------ATRDVKNLSGGEAQRVSIARTL 146 (241)
T ss_pred hcEEEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHH----------hhCCcccCCHHHHHHHHHHHHH
Confidence 38999999999989999999876432 234556667777764332 1345678999999999999999
Q ss_pred ccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHHh
Q 000522 749 YHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 749 y~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
+.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (241)
T PRK14250 147 ANNPEVLLLDEPTSALDPTSTEIIEEL-IVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFT 221 (241)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhc
Confidence 999999999999999999998888775 332122 37899999999999775 99999999999999999888753
No 393
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-35 Score=332.54 Aligned_cols=204 Identities=24% Similarity=0.331 Sum_probs=169.0
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------ 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~------ 672 (1445)
..++++|+++.|.. . .+|+|+||++++||+++|+|+||||||||+++|+|..+ |++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~---~---~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 78 (253)
T PRK14242 5 PKMEARGLSFFYGD---F---QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDP 78 (253)
T ss_pred cEEEEeeeEEEECC---e---eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEcccc
Confidence 35899999999852 2 35999999999999999999999999999999999864 5899998865
Q ss_pred ---------eEEEEcCCCCCCCccHHHHHhcCCC---C-C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000522 673 ---------SIAYVPQVPWILSGTIRDNILFGKN---Y-D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1445)
Q Consensus 673 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~---~-~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LS 735 (1445)
.++|++|++.+++.|++||+.++.. . + +++.++.++.+++...+. +..+....+||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS 151 (253)
T PRK14242 79 HVDVVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLS 151 (253)
T ss_pred ccCHHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCC
Confidence 3899999999998999999987521 1 1 234455566666643332 23456678999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEe
Q 000522 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1445)
Q Consensus 736 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1445)
|||||||+||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 152 gGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~ 229 (253)
T PRK14242 152 GGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEEL-IHE-LKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEV 229 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999998888775 433 3456899999999999865 999999999999999
Q ss_pred cCHhHHHh
Q 000522 815 GSSADLAV 822 (1445)
Q Consensus 815 g~~~~~~~ 822 (1445)
|+++++..
T Consensus 230 g~~~~~~~ 237 (253)
T PRK14242 230 GPTEQIFT 237 (253)
T ss_pred CCHHHHHc
Confidence 99888753
No 394
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=4.5e-35 Score=331.09 Aligned_cols=198 Identities=25% Similarity=0.355 Sum_probs=163.2
Q ss_pred EEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000522 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1445)
Q Consensus 607 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1445)
+++|+++.|+. . ++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~---~---~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 75 (236)
T cd03219 2 EVRGLTKRFGG---L---VALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARL 75 (236)
T ss_pred eeeeeEEEECC---E---EEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhc
Confidence 57888998852 2 359999999999999999999999999999999999999999998875
Q ss_pred eEEEEcCCCCCCCc-cHHHHHhcCCCCC-----------------hhhHHHHHHHhcchHHHhhccCCCcccccCCCCcc
Q 000522 673 SIAYVPQVPWILSG-TIRDNILFGKNYD-----------------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 734 (1445)
Q Consensus 673 ~i~y~~Q~p~l~~~-ti~~nI~~g~~~~-----------------~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~L 734 (1445)
.++|++|+|.++++ |++|||.++.... .++..+.++..+++ ...+....+|
T Consensus 76 ~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~L 144 (236)
T cd03219 76 GIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLA-----------DLADRPAGEL 144 (236)
T ss_pred CEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCcc-----------chhhCChhhC
Confidence 38999999998876 9999998753211 11233334444332 2335567799
Q ss_pred chHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEE
Q 000522 735 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKW 813 (1445)
Q Consensus 735 SGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~ 813 (1445)
|||||||++||||++.+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++
T Consensus 145 SgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~ 223 (236)
T cd03219 145 SYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAEL-IRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIA 223 (236)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEe
Confidence 99999999999999999999999999999999999988876 33212257899999999999866 99999999999999
Q ss_pred ecCHhHHHh
Q 000522 814 IGSSADLAV 822 (1445)
Q Consensus 814 ~g~~~~~~~ 822 (1445)
.|+++++..
T Consensus 224 ~~~~~~~~~ 232 (236)
T cd03219 224 EGTPDEVRN 232 (236)
T ss_pred ecCHHHhcc
Confidence 999888743
No 395
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-35 Score=364.40 Aligned_cols=211 Identities=24% Similarity=0.363 Sum_probs=176.7
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCCh-Hhhhcce
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRF 1300 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i 1300 (1445)
.++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.|+...+. +.+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPG--VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECC--EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 369999999999999999999999999999999999999999999999999976543 4567889
Q ss_pred EEEcCCCcccCc-cHHHhcCCCCC------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhc
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALL 1373 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~~------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALL 1373 (1445)
+|+||+|.+|++ |+++|+..... .+..+..+ .+.+.++.+|++........+||||||||++|||||+
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~laral~ 156 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNY-----EAREQLEHLGVDIDPDTPLKYLSIGQRQMVEIAKALA 156 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHH-----HHHHHHHHcCCCCCcCCchhhCCHHHHHHHHHHHHHH
Confidence 999999998876 99999975321 11111111 1233444456654445555689999999999999999
Q ss_pred cCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCC
Q 000522 1374 KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCA 1439 (1445)
Q Consensus 1374 r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p 1439 (1445)
++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.+++
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 157 RNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred hCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 9999999999999999999999999998763 47899999999999875 899999999999987654
No 396
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-35 Score=346.43 Aligned_cols=204 Identities=26% Similarity=0.362 Sum_probs=169.5
Q ss_pred CceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------
Q 000522 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1445)
Q Consensus 603 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 672 (1445)
...++++|+++.|.. ..+|+|+||++++||+++|+|||||||||||++|.|+.+|++|+|.++|
T Consensus 17 ~~~l~l~~v~~~~~~------~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~ 90 (377)
T PRK11607 17 TPLLEIRNLTKSFDG------QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQ 90 (377)
T ss_pred CceEEEEeEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHH
Confidence 446899999999852 2359999999999999999999999999999999999999999999987
Q ss_pred -eEEEEcCCCCCCCc-cHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHH
Q 000522 673 -SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1445)
Q Consensus 673 -~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~ 743 (1445)
.||||+|++-+|.. ||+|||.|+.. .+. ++..++++..++.... .....+|||||||||+
T Consensus 91 r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~-----------~~~~~~LSgGq~QRVa 159 (377)
T PRK11607 91 RPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFA-----------KRKPHQLSGGQRQRVA 159 (377)
T ss_pred CCEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHH
Confidence 48999999999975 99999998742 222 2445556666664332 3345689999999999
Q ss_pred HHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhh-hCCEEEEEeCCEEEEecCHhHHHh
Q 000522 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 744 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
||||++.+|+++|||||||+||+...+.+.+.+..-....+.|+|+|||+.+.+. .||+|++|++|++++.|+++++..
T Consensus 160 LARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~ 239 (377)
T PRK11607 160 LARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYE 239 (377)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHh
Confidence 9999999999999999999999999888776532111123789999999999865 599999999999999999999865
Q ss_pred c
Q 000522 823 S 823 (1445)
Q Consensus 823 ~ 823 (1445)
.
T Consensus 240 ~ 240 (377)
T PRK11607 240 H 240 (377)
T ss_pred C
Confidence 3
No 397
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2.6e-35 Score=331.19 Aligned_cols=193 Identities=25% Similarity=0.364 Sum_probs=160.3
Q ss_pred cceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC----CCcEEEECCeeCCCCChHhhhcceEEEcCCCc-cc-C-
Q 000522 1239 ALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI----CGGQILVDGLNIINTPVRDLRGRFAVVPQSPF-LF-E- 1311 (1445)
Q Consensus 1239 vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~----~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~-lF-~- 1311 (1445)
+|+|+||+|++||++||+|++|||||||+++|.|+++| ++|+|.+||.++... +..+++++|+||+|. .| +
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 58999999999999999999999999999999999999 899999999998754 233468999999995 34 3
Q ss_pred ccHHHhcCCC----CCCC---hHHHHHHHHHccHHHHHHhCCCc---hhhhcCCCCCChhHHHHHHHHHHhccCCCEEEE
Q 000522 1312 GSLRDNLDPF----HMND---DLKIWSVLEKCHVKEEVEAVGLE---TFVKESGISFSVGQRQLICLARALLKSSKVLCL 1381 (1445)
Q Consensus 1312 gTIReNLdp~----~~~s---d~ei~~aL~~~~l~~~i~~lgLd---t~v~e~G~~LSgGQrQrl~LARALLr~~~ILlL 1381 (1445)
-|+++|+... +... ++++.++++. +|++ ........+||+|||||++||||++++|+||||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~vllL 149 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQARALILEALEA---------VGLPDPEEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIA 149 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHHHHHHHHHHHH---------cCCCchHHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4888887321 1111 1223334443 3554 445666778999999999999999999999999
Q ss_pred eccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1382 DECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1382 DEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||++||..+.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+|++.
T Consensus 150 DEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 213 (230)
T TIGR02770 150 DEPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEI 213 (230)
T ss_pred cCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999987643 7899999999999975 899999999999999988654
No 398
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-35 Score=326.35 Aligned_cols=197 Identities=21% Similarity=0.275 Sum_probs=163.1
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------e
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 673 (1445)
++++|+++.|.. . .+|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (220)
T cd03265 1 IEVENLVKKYGD---F---EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRR 74 (220)
T ss_pred CEEEEEEEEECC---E---EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhc
Confidence 357888888852 2 359999999999999999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCCc-cHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000522 674 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1445)
Q Consensus 674 i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 745 (1445)
++|++|++.+++. |++||+.++.. .+ +++.++.++.+++..... ....+||||||||++||
T Consensus 75 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr~~la 143 (220)
T cd03265 75 IGIVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAAD-----------RLVKTYSGGMRRRLEIA 143 (220)
T ss_pred EEEecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhh-----------CChhhCCHHHHHHHHHH
Confidence 8999999988875 99999986421 21 234566677777654332 33458999999999999
Q ss_pred HHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccC-CceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHH
Q 000522 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML-QKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1445)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~-~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~ 820 (1445)
||++.+|+++||||||++||+++.+.+.+. +.....+ ++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 144 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 144 RSLVHRPEVLFLDEPTIGLDPQTRAHVWEY-IEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999888875 3321223 7899999999999875 999999999999998887654
No 399
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.6e-35 Score=321.31 Aligned_cols=193 Identities=20% Similarity=0.251 Sum_probs=162.1
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.. ....+|+++++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHD--QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCC--eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 689999999964 369999999999999999999999999999999999999999999999999875 34577899999
Q ss_pred EcCCCcccC-ccHHHhcCCCCC--CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000522 1303 VPQSPFLFE-GSLRDNLDPFHM--NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1445)
Q Consensus 1303 VpQdp~lF~-gTIReNLdp~~~--~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1445)
+||++.++. .|+++|+..... ..+.++.++++. +++....+....+||+|||||++||||++++|++|
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~l~~---------~~l~~~~~~~~~~LS~G~~~rv~laral~~~p~~l 149 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVGITELCRL---------FSLEHLIDYPCGLLSSGQKRQVALLRLWMSKAKLW 149 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHHHHHHHHH---------cCCchhhhCChhhcCHHHHHHHHHHHHHhcCCCEE
Confidence 999998875 699999864321 122233334433 34443334444579999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHh-CCCcEEEEeccChhHHhhcCEEEE
Q 000522 1380 CLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEILI 1427 (1445)
Q Consensus 1380 lLDEaTS~lD~~te~~Iq~~I~~~-~~~~TvI~IaHrl~ti~~~DrI~V 1427 (1445)
||||||++||..+.+.+.+.|++. .+++|+|++||+.+.+.+||.-++
T Consensus 150 ilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 150 LLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 999999999999999999999875 358999999999999999987544
No 400
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=4.4e-35 Score=326.48 Aligned_cols=190 Identities=25% Similarity=0.402 Sum_probs=157.5
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|+++.|+.. . +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 77 (216)
T TIGR00960 2 IRFEQVSKAYPGG-H---QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPF 77 (216)
T ss_pred eEEEEEEEEecCC-C---eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHH
Confidence 5789999998532 1 2359999999999999999999999999999999999999999998875
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 ---SIAYVPQVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
.++|++|+|.++. .|++||+.++.. .+ +++..++++.+++..... ....+||||||||
T Consensus 78 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qr 146 (216)
T TIGR00960 78 LRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAH-----------ALPMQLSGGEQQR 146 (216)
T ss_pred HHHhceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHH
Confidence 3899999999886 599999987521 11 234566677777654333 3345899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEE
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 811 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i 811 (1445)
++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++
T Consensus 147 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 147 VAIARAIVHKPPLLLADEPTGNLDPELSRDIMRL-FEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 9999999999999999999999999999988876 33212347899999999999875 999999999974
No 401
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=9.1e-35 Score=330.59 Aligned_cols=201 Identities=27% Similarity=0.381 Sum_probs=166.9
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCC-----CeEEEEcC--------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT-----HGSIHASG-------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~-----~G~i~~~~-------- 672 (1445)
++++|+++.|.. . .+++|+||++++||+++|+|+||||||||+++|+|.++|+ +|+|.++|
T Consensus 2 l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~ 75 (247)
T TIGR00972 2 IEIENLNLFYGE---K---EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKI 75 (247)
T ss_pred EEEEEEEEEECC---e---eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEcccccc
Confidence 678999998853 1 3599999999999999999999999999999999999998 99998864
Q ss_pred -------eEEEEcCCCCCCCccHHHHHhcCCCC----Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchH
Q 000522 673 -------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1445)
Q Consensus 673 -------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGG 737 (1445)
.++|++|++++++.|++||+.++... +. ++..++++..++..++. ........+||||
T Consensus 76 ~~~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG 148 (247)
T TIGR00972 76 DVVELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGG 148 (247)
T ss_pred chHHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHH
Confidence 38999999999999999999875321 11 23445556666653221 1234566799999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecC
Q 000522 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 816 (1445)
Q Consensus 738 QkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~ 816 (1445)
||||++||||++.+|+++||||||++||+.+.+.+++. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 149 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~ 226 (247)
T TIGR00972 149 QQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEEL-IQE-LKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGP 226 (247)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999888775 433 3345899999999998765 99999999999999999
Q ss_pred HhHHH
Q 000522 817 SADLA 821 (1445)
Q Consensus 817 ~~~~~ 821 (1445)
++++.
T Consensus 227 ~~~~~ 231 (247)
T TIGR00972 227 TEQIF 231 (247)
T ss_pred HHHHH
Confidence 88874
No 402
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=330.66 Aligned_cols=204 Identities=26% Similarity=0.335 Sum_probs=168.4
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------ 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------ 672 (1445)
..++++|+++.|.. . .+|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 79 (254)
T PRK14273 6 AIIETENLNLFYTD---F---KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSN 79 (254)
T ss_pred ceEEEeeeEEEeCC---c---eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccc
Confidence 46899999999852 2 259999999999999999999999999999999999987 489998764
Q ss_pred ---------eEEEEcCCCCCCCccHHHHHhcCCCC----Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000522 673 ---------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1445)
Q Consensus 673 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LS 735 (1445)
.++|++|+|.+++.|++|||.++... +. ++..++++.+++...+. .....++.+||
T Consensus 80 ~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS 152 (254)
T PRK14273 80 NFDILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVK-------DKLNTNALSLS 152 (254)
T ss_pred cccHHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhH-------HHHhCCcccCC
Confidence 38999999999989999999886421 21 23344555555532221 12344678999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEe
Q 000522 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1445)
Q Consensus 736 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1445)
||||||++||||++.+|+++||||||++||+.+.+.+++. +.. +.+++|+|++||+++.+.. ||++++|++|++++.
T Consensus 153 gG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~ 230 (254)
T PRK14273 153 GGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEEL-IIN-LKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEE 230 (254)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999988876 333 3456899999999999765 999999999999999
Q ss_pred cCHhHHHh
Q 000522 815 GSSADLAV 822 (1445)
Q Consensus 815 g~~~~~~~ 822 (1445)
|+++++..
T Consensus 231 g~~~~~~~ 238 (254)
T PRK14273 231 SSTDELFF 238 (254)
T ss_pred CCHHHHHh
Confidence 99988753
No 403
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.7e-35 Score=325.40 Aligned_cols=197 Identities=29% Similarity=0.370 Sum_probs=161.5
Q ss_pred EEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------eEEEEc
Q 000522 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAYVP 678 (1445)
Q Consensus 607 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~y~~ 678 (1445)
+++|+++.|.... ..+++|+|+||+|++|++++|+||||||||||+++|+|..+|++|+|.++| .++|++
T Consensus 2 ~~~~l~~~~~~~~--~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~ 79 (220)
T cd03293 2 EVRNVSKTYGGGG--GAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVF 79 (220)
T ss_pred eEEEEEEEcCCCC--cceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEe
Confidence 5788899885321 112469999999999999999999999999999999999999999999876 589999
Q ss_pred CCCCCCC-ccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHcc
Q 000522 679 QVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 750 (1445)
Q Consensus 679 Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~ 750 (1445)
|+|.+++ .|++||+.++.. .+ .++.++.++.+++...+. ....+||||||||++||||++.
T Consensus 80 q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 80 QQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFEN-----------AYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred cccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CCcccCCHHHHHHHHHHHHHHc
Confidence 9999887 699999987532 11 234556667766654333 3345899999999999999999
Q ss_pred CCCEEEEcCCCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhhh-CCEEEEEe--CCEEEEecCH
Q 000522 751 GSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMD--KGQVKWIGSS 817 (1445)
Q Consensus 751 ~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-~d~i~~l~--~G~i~~~g~~ 817 (1445)
+|+++||||||++||+.+.+.+++. +.... ..++|+|++||+++.+.. ||++++|+ +|++++.++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~-l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEE-LLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999988886 33211 237899999999998765 99999999 7999987764
No 404
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=6.4e-35 Score=322.35 Aligned_cols=188 Identities=27% Similarity=0.418 Sum_probs=157.3
Q ss_pred EEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------eEEEE
Q 000522 608 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------SIAYV 677 (1445)
Q Consensus 608 ~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------~i~y~ 677 (1445)
++|+++.|... .++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .++|+
T Consensus 2 ~~~l~~~~~~~-----~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~ 76 (205)
T cd03226 2 IENISFSYKKG-----TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYV 76 (205)
T ss_pred cccEEEEeCCc-----CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEE
Confidence 56778887531 2359999999999999999999999999999999999999999999876 48999
Q ss_pred cCCC--CCCCccHHHHHhcCCCC---ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCC
Q 000522 678 PQVP--WILSGTIRDNILFGKNY---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGS 752 (1445)
Q Consensus 678 ~Q~p--~l~~~ti~~nI~~g~~~---~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~ 752 (1445)
+|+| .+++.|++||+.++... ++++.+++++.+++..... .....||||||||++||||+..+|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKE-----------RHPLSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcC-----------CCchhCCHHHHHHHHHHHHHHhCC
Confidence 9998 46778999999876432 2346677888887764433 233589999999999999999999
Q ss_pred CEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEE
Q 000522 753 DIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK 812 (1445)
Q Consensus 753 ~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~ 812 (1445)
++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGEL-IRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999998888775 43312357899999999999875 9999999999874
No 405
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=343.58 Aligned_cols=204 Identities=28% Similarity=0.365 Sum_probs=167.5
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|++++|+.... ..++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~i~~l~~~y~~~~~--~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~ 79 (343)
T PRK11153 2 IELKNISKVFPQGGR--TIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRK 79 (343)
T ss_pred EEEEeEEEEeCCCCC--ceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHH
Confidence 578999999863111 12469999999999999999999999999999999999999999999875
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
.|+|++|++.+++ .|++|||.++.. .+. ++..+.++..+|... ......+||||||||
T Consensus 80 ~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LSgGq~qR 148 (343)
T PRK11153 80 ARRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDK-----------ADRYPAQLSGGQKQR 148 (343)
T ss_pred HhcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHH
Confidence 3999999999886 599999987532 222 234445555555432 234556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCc-ccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhH
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGP-HMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~-~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 819 (1445)
++||||++.+|++++|||||++||+.+.+.+.+. +... ..+++|+|++||+++.+.. ||+|++|++|++++.|+.++
T Consensus 149 v~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~-L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~ 227 (343)
T PRK11153 149 VAIARALASNPKVLLCDEATSALDPATTRSILEL-LKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSE 227 (343)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHH
Confidence 9999999999999999999999999999988876 3321 1237899999999999876 99999999999999999998
Q ss_pred HHhc
Q 000522 820 LAVS 823 (1445)
Q Consensus 820 ~~~~ 823 (1445)
+...
T Consensus 228 ~~~~ 231 (343)
T PRK11153 228 VFSH 231 (343)
T ss_pred HHhC
Confidence 8643
No 406
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-35 Score=363.18 Aligned_cols=211 Identities=24% Similarity=0.335 Sum_probs=177.5
Q ss_pred EEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCCh-HhhhcceEEE
Q 000522 1225 FQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV-RDLRGRFAVV 1303 (1445)
Q Consensus 1225 f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~-~~lR~~i~~V 1303 (1445)
++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+|++++|+
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999964 469999999999999999999999999999999999999999999999999976654 4457889999
Q ss_pred cCCCcccCc-cHHHhcCCCCC------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1304 PQSPFLFEG-SLRDNLDPFHM------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1304 pQdp~lF~g-TIReNLdp~~~------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
||++.+|.. |+++|+.+... .+.++.++ ...+.++.+|++........+||||||||++|||||+++|
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgGq~qrv~lA~al~~~p 153 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR-----DTKAIFDELDIDIDPRAKVATLSVSQMQMIEIAKAFSYNA 153 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHH-----HHHHHHHHcCCCCCccCchhhCCHHHHHHHHHHHHHHhCC
Confidence 999987764 99999975321 12222221 1233445557766556666789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|++++.
T Consensus 154 ~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 221 (491)
T PRK10982 154 KIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGL 221 (491)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhC
Confidence 9999999999999999999999998753 47899999999998875 899999999999999998765
No 407
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=333.47 Aligned_cols=202 Identities=26% Similarity=0.394 Sum_probs=170.7
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|... . +++|+|+||+|++||+++|+||||||||||+++|+|..+|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~-~---~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~ 80 (279)
T PRK13635 5 IIRVEHISFRYPDA-A---TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVR 80 (279)
T ss_pred eEEEEEEEEEeCCC-C---ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHh
Confidence 58899999999532 1 2359999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCC--CCCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000522 673 -SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1445)
Q Consensus 673 -~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv 742 (1445)
.|+|++|+| .+++.||+|||.++.. .++ ++..++++.++|...+... ...||||||||+
T Consensus 81 ~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LS~G~~qrv 149 (279)
T PRK13635 81 RQVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNRE-----------PHRLSGGQKQRV 149 (279)
T ss_pred hheEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCC-----------cccCCHHHHHHH
Confidence 389999998 4667899999988632 222 3456677777776555433 358999999999
Q ss_pred HHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHH
Q 000522 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 821 (1445)
Q Consensus 743 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~ 821 (1445)
+||||++.+|+++||||||++||+.+.+.+++. +..... .+.|+|++||+++.+..||+|++|++|++++.|+.+++.
T Consensus 150 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (279)
T PRK13635 150 AIAGVLALQPDIIILDEATSMLDPRGRREVLET-VRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIF 228 (279)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999988886 333122 378999999999998889999999999999999988875
Q ss_pred h
Q 000522 822 V 822 (1445)
Q Consensus 822 ~ 822 (1445)
.
T Consensus 229 ~ 229 (279)
T PRK13635 229 K 229 (279)
T ss_pred c
Confidence 4
No 408
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1e-34 Score=329.62 Aligned_cols=198 Identities=25% Similarity=0.375 Sum_probs=163.0
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|+++.|.. . .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~--~---~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (243)
T TIGR02315 2 LEVENLSKVYPN--G---KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRK 76 (243)
T ss_pred eEEEeeeeecCC--C---cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHH
Confidence 568899998851 1 2359999999999999999999999999999999999999999998875
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCCC---------------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000522 673 ---SIAYVPQVPWILS-GTIRDNILFGKNY---------------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 733 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~~---------------~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~ 733 (1445)
.++|++|++.++. .|++||+.++... +.++..++++.+++... ......+
T Consensus 77 ~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~ 145 (243)
T TIGR02315 77 LRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADK-----------AYQRADQ 145 (243)
T ss_pred HHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhh-----------hcCCccc
Confidence 2899999998886 5999999875310 11234455555555432 2345679
Q ss_pred cchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEE
Q 000522 734 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQV 811 (1445)
Q Consensus 734 LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i 811 (1445)
||||||||++||||++.+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||++++|++|++
T Consensus 146 LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i 224 (243)
T TIGR02315 146 LSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDY-LKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEI 224 (243)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEE
Confidence 999999999999999999999999999999999998888775 333112 37899999999999864 999999999999
Q ss_pred EEecCHhHH
Q 000522 812 KWIGSSADL 820 (1445)
Q Consensus 812 ~~~g~~~~~ 820 (1445)
++.|+++++
T Consensus 225 ~~~~~~~~~ 233 (243)
T TIGR02315 225 VFDGAPSEL 233 (243)
T ss_pred EecCCHHHh
Confidence 999988775
No 409
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-35 Score=314.72 Aligned_cols=216 Identities=25% Similarity=0.404 Sum_probs=184.1
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhh-hcceE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL-RGRFA 1301 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l-R~~i~ 1301 (1445)
++.+|++.+|.. -.+++||||++++||.+|++||+||||||+++++.|+|+|++|+|.++|.||..++++.. |..|+
T Consensus 5 L~v~~l~k~FGG--l~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 5 LEVRGLSKRFGG--LTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred eeeccceeecCC--EEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 678999999964 369999999999999999999999999999999999999999999999999999998875 44588
Q ss_pred EEcCCCcccCc-cHHHhcCCCCC------------CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHH
Q 000522 1302 VVPQSPFLFEG-SLRDNLDPFHM------------NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICL 1368 (1445)
Q Consensus 1302 ~VpQdp~lF~g-TIReNLdp~~~------------~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~L 1368 (1445)
--.|.+-+|++ |+-||+.-... ....+-.++.+++ .+.++..||+...++...+||+||++||-|
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A--~~~Le~vgL~~~a~~~A~~LsyG~qR~LEI 160 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERA--RELLEFVGLGELADRPAGNLSYGQQRRLEI 160 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHH--HHHHHHcCCchhhcchhhcCChhHhHHHHH
Confidence 88999999987 99999853211 0000112222222 334445588888888888999999999999
Q ss_pred HHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCC--CcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1369 ARALLKSSKVLCLDECTANVDAQTASILQNAISSECK--GMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1369 ARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~--~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||||..+|++|+||||.++|.++-...+.+.|++..+ +.|+++|-|+++.+++ ||||+||+.|+++.+|+|++-
T Consensus 161 ArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~P~eV 237 (250)
T COG0411 161 ARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGTPEEV 237 (250)
T ss_pred HHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCCHHHH
Confidence 9999999999999999999999988899999988764 5899999999999987 899999999999999999864
No 410
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.5e-35 Score=334.27 Aligned_cols=186 Identities=30% Similarity=0.426 Sum_probs=156.8
Q ss_pred cceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------------eEEEEcCCCCCCC-c
Q 000522 625 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILS-G 686 (1445)
Q Consensus 625 ~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------------~i~y~~Q~p~l~~-~ 686 (1445)
.+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .++|++|+|.+++ .
T Consensus 38 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 117 (269)
T cd03294 38 VGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALLPHR 117 (269)
T ss_pred eEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcccCCCC
Confidence 359999999999999999999999999999999999999999998865 3899999999885 5
Q ss_pred cHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcC
Q 000522 687 TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDD 759 (1445)
Q Consensus 687 ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe 759 (1445)
|++||+.++.. ++ +++..++++.+++...+.. ...+||||||||++||||++.+|+++||||
T Consensus 118 tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrv~lAral~~~p~illLDE 186 (269)
T cd03294 118 TVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHK-----------YPDELSGGMQQRVGLARALAVDPDILLMDE 186 (269)
T ss_pred cHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhC-----------CcccCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 99999987521 22 2345566777777544433 345899999999999999999999999999
Q ss_pred CCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHHh
Q 000522 760 VLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 760 ~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
||++||+.+.+.+.+. +.... ..|+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 187 Pt~~LD~~~~~~l~~~-l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 187 AFSALDPLIRREMQDE-LLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred CCccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999988876 32211 237899999999998765 99999999999999999988754
No 411
>KOG0060 consensus Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=2.1e-32 Score=318.73 Aligned_cols=336 Identities=22% Similarity=0.302 Sum_probs=243.3
Q ss_pred HHhhccHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH----HHhhcCCCCCCcc
Q 000522 1082 TETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMA----VIGSRGNLPATFS 1157 (1445)
Q Consensus 1082 ~Etl~Gl~tIraf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~l~~~~~~~~~~~~----v~~~~~~~~~~~~ 1157 (1445)
++...+...|.-|+.++..........++.-.......+...|+++..+.+.-+ ..++..++ ++..+ ..+..
T Consensus 269 ~rlr~NaE~iAFY~g~~~E~~~~~~~f~~Lv~~l~~l~~~r~~l~f~~n~~~Yl-g~ilsy~vi~~p~Fs~h---~y~~~ 344 (659)
T KOG0060|consen 269 SRLRVNAEEIAFYRGGQVEHQRTDQRFRNLVQHLRELMSFRFWLGFIDNIFDYL-GGILSYVVIAIPFFSGH---VYDDL 344 (659)
T ss_pred eeeeecchhhhhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhheeeEEeeeeeccc---ccCCc
Confidence 344556677888887766655555555555444455566777887766655421 11111111 11111 12233
Q ss_pred cHHHH-HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC----C---c------cccc----c---CCCC
Q 000522 1158 TPGLV-GLA---LSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDV----P---Q------EELC----G---YQSL 1213 (1445)
Q Consensus 1158 ~~g~v-gl~---l~~~~~~~~~l~~li~~~~~~e~~~~sv~Ri~~~~~~----~---~------e~~~----~---~~~~ 1213 (1445)
++... +.. ..+.+.+.+.+..++....++..-.+-..||-++.+. . + |+.. . ....
T Consensus 345 s~aEL~~~i~~na~~~i~Li~~f~~l~~~~~~ls~lsGyt~Ri~el~~~l~d~~~~~~~~~~~~~~~~E~~~~l~~~~G~ 424 (659)
T KOG0060|consen 345 SPAELSGLISNNAFVFIYLISAFGRLVDLSRDLSRLSGYTHRIGELMEVLDDLSSGSQECTMEEEELGEAEWGLSLPPGS 424 (659)
T ss_pred CHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHHhccCCcchhhhhhhhhhhhhccCCCCCC
Confidence 34333 222 1223334444555555555555555667888777642 0 0 1000 0 0111
Q ss_pred CCCCCCCccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCCh
Q 000522 1214 SPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPV 1293 (1445)
Q Consensus 1214 ~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~ 1293 (1445)
+..||.+..|+|++|++.=|.+.+...+|+||+|+.|+.+-|+|+||||||||++.|-|+.+..+|++.--...-
T Consensus 425 ~~~~~~Dn~i~~e~v~l~tPt~g~~lie~Ls~~V~~g~~LLItG~sG~GKtSLlRvlggLWp~~~G~l~k~~~~~----- 499 (659)
T KOG0060|consen 425 GKAEPADNAIEFEEVSLSTPTNGDLLIENLSLEVPSGQNLLITGPSGCGKTSLLRVLGGLWPSTGGKLTKPTDGG----- 499 (659)
T ss_pred cccccccceEEeeeeeecCCCCCceeeeeeeeEecCCCeEEEECCCCCchhHHHHHHhcccccCCCeEEecccCC-----
Confidence 345788889999999999877666667789999999999999999999999999999999999999997532110
Q ss_pred HhhhcceEEEcCCCcccCccHHHhcC-CC-------CCCChHHHHHHHHHccHHHHHHhC-CCchhhh-cCCCCCChhHH
Q 000522 1294 RDLRGRFAVVPQSPFLFEGSLRDNLD-PF-------HMNDDLKIWSVLEKCHVKEEVEAV-GLETFVK-ESGISFSVGQR 1363 (1445)
Q Consensus 1294 ~~lR~~i~~VpQdp~lF~gTIReNLd-p~-------~~~sd~ei~~aL~~~~l~~~i~~l-gLdt~v~-e~G~~LSgGQr 1363 (1445)
-+.+-++||.|++-.||+|+-+- |. ...+|++|.+.|+.++|...++.. |+|+++. +...-||+||+
T Consensus 500 ---~~~lfflPQrPYmt~GTLRdQvIYP~~~~~~~~~~~~d~~i~r~Le~v~L~hl~~r~ggld~~~~~dW~dvLS~GEq 576 (659)
T KOG0060|consen 500 ---PKDLFFLPQRPYMTLGTLRDQVIYPLKAEDMDSKSASDEDILRILENVQLGHLLEREGGLDQQVDWDWMDVLSPGEQ 576 (659)
T ss_pred ---CCceEEecCCCCccccchhheeeccCccccccccCCCHHHHHHHHHHhhhhhHHHHhCCCCchhhccHHhhcCHHHH
Confidence 04589999999999999999974 31 235899999999999999999888 9997654 55667999999
Q ss_pred HHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhhcCEEEEEeCC
Q 000522 1364 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHG 1431 (1445)
Q Consensus 1364 Qrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~~DrI~Vl~~G 1431 (1445)
||+|+||.++.+|++-+|||+|||||.+.|..+.+.+++. +-|.|.|.||-+.-+.-|.++-|+.+
T Consensus 577 QRLa~ARLfy~kPk~AiLDE~TSAv~~dvE~~~Yr~~r~~--giT~iSVgHRkSL~kfHd~~L~~~g~ 642 (659)
T KOG0060|consen 577 QRLAFARLFYHKPKFAILDECTSAVTEDVEGALYRKCREM--GITFISVGHRKSLWKFHDYVLRMDGR 642 (659)
T ss_pred HHHHHHHHHhcCCceEEeechhhhccHHHHHHHHHHHHHc--CCeEEEeccHHHHHhhhhEEEEecCC
Confidence 9999999999999999999999999999999999999985 89999999999998889999999864
No 412
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-35 Score=318.91 Aligned_cols=212 Identities=25% Similarity=0.332 Sum_probs=180.4
Q ss_pred cEEEEEEEEEeCCCC----------------------CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCc
Q 000522 1222 LIEFQNVTMRYKPSL----------------------PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1279 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~----------------------~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G 1279 (1445)
.|+++||+.-++.+. ..-++|+||+|+.||..-|.|-||||||||+.++.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 588899988775431 1237999999999999999999999999999999999999999
Q ss_pred EEEECCeeCCCCChHhhh----cceEEEcCCCcccCc-cHHHhcCCCCCC---C----hHHHHHHHHHccHHHHHHhCCC
Q 000522 1280 QILVDGLNIINTPVRDLR----GRFAVVPQSPFLFEG-SLRDNLDPFHMN---D----DLKIWSVLEKCHVKEEVEAVGL 1347 (1445)
Q Consensus 1280 ~I~IDG~di~~i~~~~lR----~~i~~VpQdp~lF~g-TIReNLdp~~~~---s----d~ei~~aL~~~~l~~~i~~lgL 1347 (1445)
+|++||.||..++..+|| +++++|.|.--||+- ||-+|..++-+. + .+...++|+.+||.++
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~------ 157 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGY------ 157 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhh------
Confidence 999999999999988875 579999999999986 999999876432 2 2234455666665544
Q ss_pred chhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCE
Q 000522 1348 ETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDE 1424 (1445)
Q Consensus 1348 dt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~Dr 1424 (1445)
-..-...||||+|||+.|||||..+|+||++|||.|+||+--...+|+-+.+.- -++|+++|||+|+.... -||
T Consensus 158 ---~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~r 234 (386)
T COG4175 158 ---ADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDR 234 (386)
T ss_pred ---hhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccce
Confidence 334456799999999999999999999999999999999999999999886543 38999999999997654 699
Q ss_pred EEEEeCCeEeeecCCCCC
Q 000522 1425 ILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1425 I~Vl~~G~vvE~G~p~~~ 1442 (1445)
|..|++|+|+..|+|+|-
T Consensus 235 IaimkdG~ivQ~Gtp~eI 252 (386)
T COG4175 235 IAIMKDGEIVQVGTPEEI 252 (386)
T ss_pred EEEecCCeEEEeCCHHHH
Confidence 999999999999999874
No 413
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=330.16 Aligned_cols=206 Identities=25% Similarity=0.329 Sum_probs=170.9
Q ss_pred CCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC----
Q 000522 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG---- 672 (1445)
Q Consensus 602 ~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~---- 672 (1445)
....++++|+++.|.. . ++|+|+||+|++||+++|+||||||||||+++|+|.++ |++|+|.++|
T Consensus 10 ~~~~l~~~~l~~~~~~---~---~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~ 83 (260)
T PRK10744 10 APSKIQVRNLNFYYGK---F---HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENIL 83 (260)
T ss_pred CCceEEEEEEEEEeCC---e---EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcc
Confidence 3456899999999852 2 35999999999999999999999999999999999986 5899998864
Q ss_pred -----------eEEEEcCCCCCCCccHHHHHhcCCC----CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000522 673 -----------SIAYVPQVPWILSGTIRDNILFGKN----YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 733 (1445)
Q Consensus 673 -----------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~ 733 (1445)
.++|++|+|.+++.|++||+.++.. .++ ++.+++++..++..++. +..++...+
T Consensus 84 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 156 (260)
T PRK10744 84 TPKQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYS 156 (260)
T ss_pred ccccchHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCC
Confidence 4899999999988999999987532 222 33455666666643332 234567789
Q ss_pred cchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEE
Q 000522 734 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK 812 (1445)
Q Consensus 734 LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~ 812 (1445)
||||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|+++
T Consensus 157 LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~ 234 (260)
T PRK10744 157 LSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEEL-ITE-LKQDYTVVIVTHNMQQAARCSDYTAFMYLGELI 234 (260)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999888776 332 3356899999999998865 9999999999999
Q ss_pred EecCHhHHHh
Q 000522 813 WIGSSADLAV 822 (1445)
Q Consensus 813 ~~g~~~~~~~ 822 (1445)
+.|+.+++..
T Consensus 235 ~~g~~~~~~~ 244 (260)
T PRK10744 235 EFGNTDTIFT 244 (260)
T ss_pred EeCCHHHHHh
Confidence 9999888753
No 414
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.4e-34 Score=337.53 Aligned_cols=202 Identities=25% Similarity=0.382 Sum_probs=168.1
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1445)
..++++|+++.|.. ..+|+|+||+|++||+++++||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~i~i~~l~k~~~~------~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~ 79 (306)
T PRK13537 6 APIDFRNVEKRYGD------KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHAR 79 (306)
T ss_pred ceEEEEeEEEEECC------eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHH
Confidence 46899999999852 2359999999999999999999999999999999999999999999976
Q ss_pred -eEEEEcCCCCCCC-ccHHHHHhc-CCCC--Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHH
Q 000522 673 -SIAYVPQVPWILS-GTIRDNILF-GKNY--DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1445)
Q Consensus 673 -~i~y~~Q~p~l~~-~ti~~nI~~-g~~~--~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~ 743 (1445)
.||||||+|.++. .|++||+.+ +..+ +. ++.+++++.++|.... .....+||||||||++
T Consensus 80 ~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~ 148 (306)
T PRK13537 80 QRVGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKA-----------DAKVGELSGGMKRRLT 148 (306)
T ss_pred hcEEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHh-----------cCchhhCCHHHHHHHH
Confidence 4999999999886 599999985 3211 21 2334555555554322 2334589999999999
Q ss_pred HHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHHh
Q 000522 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 744 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
||||+.++|++++|||||++||+...+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 149 LARALVNDPDVLVLDEPTTGLDPQARHLMWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred HHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999999999988876 43312347899999999999876 99999999999999999999865
Q ss_pred c
Q 000522 823 S 823 (1445)
Q Consensus 823 ~ 823 (1445)
.
T Consensus 228 ~ 228 (306)
T PRK13537 228 S 228 (306)
T ss_pred c
Confidence 4
No 415
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=332.99 Aligned_cols=200 Identities=26% Similarity=0.399 Sum_probs=166.9
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|+++.|... ..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (274)
T PRK13644 2 IRLENVSYSYPDG-----TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIR 76 (274)
T ss_pred EEEEEEEEEcCCC-----CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHH
Confidence 5788999998521 2359999999999999999999999999999999999999999998875
Q ss_pred -eEEEEcCCCC--CCCccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000522 673 -SIAYVPQVPW--ILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1445)
Q Consensus 673 -~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv 742 (1445)
.++|++|+|. +++.|++|||.++.. .+ .++.+++++.++++... ......||||||||+
T Consensus 77 ~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrv 145 (274)
T PRK13644 77 KLVGIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYR-----------HRSPKTLSGGQGQCV 145 (274)
T ss_pred hheEEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHh-----------cCCcccCCHHHHHHH
Confidence 3899999986 567899999988632 22 23345556666664332 345568999999999
Q ss_pred HHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHh
Q 000522 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 743 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
+||||++.+|+++||||||++||+.+.+.+++. +.....+|.|+|++||+++.++.||+|++|++|++++.|+.+++..
T Consensus 146 ~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 146 ALAGILTMEPECLIFDEVTSMLDPDSGIAVLER-IKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999998888876 3321234789999999999998899999999999999999988753
No 416
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.4e-34 Score=345.06 Aligned_cols=211 Identities=27% Similarity=0.459 Sum_probs=174.4
Q ss_pred cEEEEEEEEEeCCCCC--ccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC----CcEEEECCeeCCCCChHh
Q 000522 1222 LIEFQNVTMRYKPSLP--AALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC----GGQILVDGLNIINTPVRD 1295 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~--~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~----~G~I~IDG~di~~i~~~~ 1295 (1445)
-++++|++..|..... .+++||||+|.+||.+||||+|||||||+.++|.|+.++. +|+|.+||.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975533 5999999999999999999999999999999999999987 899999999999998866
Q ss_pred hh----cceEEEcCCCc-ccCc--cHHHhcC----CCCCCC----hHHHHHHHHHccHHHHHHhCCCchhhh--cCCCCC
Q 000522 1296 LR----GRFAVVPQSPF-LFEG--SLRDNLD----PFHMND----DLKIWSVLEKCHVKEEVEAVGLETFVK--ESGISF 1358 (1445)
Q Consensus 1296 lR----~~i~~VpQdp~-lF~g--TIReNLd----p~~~~s----d~ei~~aL~~~~l~~~i~~lgLdt~v~--e~G~~L 1358 (1445)
.| ++|++|||||. .++- ||.+-|. .....+ .++..+.|+.+ |+..... .-...|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~V---------gl~~~~~~~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQV---------GLPDPERRDRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHc---------CCCChhhhccCCccc
Confidence 64 57999999996 4443 5544442 111111 12233333333 5544433 356789
Q ss_pred ChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEee
Q 000522 1359 SVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPH 1435 (1445)
Q Consensus 1359 SgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE 1435 (1445)
|||||||+.||+||..+|++||+||||.+||+.|.+.|.+.|++.. .|.++|+|||++..+.+ ||||+||.+|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998865 58999999999999986 89999999999999
Q ss_pred ecCCCC
Q 000522 1436 CGCAAA 1441 (1445)
Q Consensus 1436 ~G~p~~ 1441 (1445)
.|++++
T Consensus 236 ~G~~~~ 241 (539)
T COG1123 236 TGPTEE 241 (539)
T ss_pred ecCHHH
Confidence 998765
No 417
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.5e-34 Score=320.28 Aligned_cols=192 Identities=24% Similarity=0.330 Sum_probs=161.3
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------eE
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 674 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 674 (1445)
++++|+++.|+. .++|+|+||++++|++++|+||||||||||+++|+|..+|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~~------~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i 74 (208)
T cd03268 1 LKTNDLTKTYGK------KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRI 74 (208)
T ss_pred CEEEEEEEEECC------eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhE
Confidence 357899998842 2359999999999999999999999999999999999999999999976 38
Q ss_pred EEEcCCCCCC-CccHHHHHhcCC---CCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHcc
Q 000522 675 AYVPQVPWIL-SGTIRDNILFGK---NYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYH 750 (1445)
Q Consensus 675 ~y~~Q~p~l~-~~ti~~nI~~g~---~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~ 750 (1445)
+||+|++.++ +.|++||+.++. ..++++.+++++..++.... ......||||||||++||||++.
T Consensus 75 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al~~ 143 (208)
T cd03268 75 GALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSA-----------KKKVKGFSLGMKQRLGIALALLG 143 (208)
T ss_pred EEecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHH-----------hhhHhhCCHHHHHHHHHHHHHhc
Confidence 9999999887 469999997653 22455666777777775433 23456899999999999999999
Q ss_pred CCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEec
Q 000522 751 GSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 751 ~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1445)
+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 144 ~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 144 NPDLLILDEPTNGLDPDGIKELREL-ILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCCEEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999988875 33212257899999999999875 9999999999998754
No 418
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.3e-34 Score=323.72 Aligned_cols=198 Identities=26% Similarity=0.439 Sum_probs=164.4
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------e
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 673 (1445)
++++|+++.|... + +++|+|+||++++|++++|+||||||||||+++|.|.++|++|+|.++| .
T Consensus 1 l~~~~l~~~~~~~-~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (220)
T cd03263 1 LQIRNLTKTYKKG-T---KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQS 76 (220)
T ss_pred CEEEeeEEEeCCC-C---ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhh
Confidence 3578889988532 1 2359999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCCC-CccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000522 674 IAYVPQVPWIL-SGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1445)
Q Consensus 674 i~y~~Q~p~l~-~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 745 (1445)
++|++|+|.++ +.|++||+.++.. .+ .++.+++++.+++.... .....+||||||||++||
T Consensus 77 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la 145 (220)
T cd03263 77 LGYCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-----------NKRARTLSGGMKRKLSLA 145 (220)
T ss_pred EEEecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-----------hChhhhCCHHHHHHHHHH
Confidence 89999999888 5699999986421 22 23456667777665332 234468999999999999
Q ss_pred HHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHH
Q 000522 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1445)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~ 820 (1445)
||++.+|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 146 ~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 146 IALIGGPSVLLLDEPTSGLDPASRRAIWDL-ILE-VRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HHHhcCCCEEEECCCCCCCCHHHHHHHHHH-HHH-HhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 999999999999999999999999988875 333 3446899999999999875 999999999999999988764
No 419
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-34 Score=328.43 Aligned_cols=197 Identities=26% Similarity=0.379 Sum_probs=161.9
Q ss_pred EEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000522 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1445)
Q Consensus 607 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1445)
+++|+++.|... .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (241)
T cd03256 2 EVENLSKTYPNG-----KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQL 76 (241)
T ss_pred EEeeEEEecCCc-----cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHH
Confidence 578888888531 2359999999999999999999999999999999999999999998865
Q ss_pred --eEEEEcCCCCCCC-ccHHHHHhcCCC------------CC---hhhHHHHHHHhcchHHHhhccCCCcccccCCCCcc
Q 000522 673 --SIAYVPQVPWILS-GTIRDNILFGKN------------YD---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 734 (1445)
Q Consensus 673 --~i~y~~Q~p~l~~-~ti~~nI~~g~~------------~~---~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~L 734 (1445)
.++|++|++.++. .|++||+.++.. .. .++..++++.+++.. .....+.+|
T Consensus 77 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~L 145 (241)
T cd03256 77 RRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLD-----------KAYQRADQL 145 (241)
T ss_pred HhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChh-----------hhCCCcccC
Confidence 3899999998876 699999986531 01 122334444444432 234567799
Q ss_pred chHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhh-hCCEEEEEeCCEEE
Q 000522 735 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVK 812 (1445)
Q Consensus 735 SGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~ 812 (1445)
|||||||++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+. .||++++|++|+++
T Consensus 146 S~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~ 224 (241)
T cd03256 146 SGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDL-LKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIV 224 (241)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999988876 332112 3789999999999988 59999999999999
Q ss_pred EecCHhHH
Q 000522 813 WIGSSADL 820 (1445)
Q Consensus 813 ~~g~~~~~ 820 (1445)
+.|+++++
T Consensus 225 ~~~~~~~~ 232 (241)
T cd03256 225 FDGPPAEL 232 (241)
T ss_pred eecCHHHh
Confidence 99998876
No 420
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=325.35 Aligned_cols=198 Identities=24% Similarity=0.327 Sum_probs=163.1
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|+.... ..++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~--~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 82 (233)
T PRK11629 5 LLQCDNLCKRYQEGSV--QTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKA 82 (233)
T ss_pred eEEEEeEEEEcCCCCc--ceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHH
Confidence 4789999999964211 12469999999999999999999999999999999999999999999875
Q ss_pred -----eEEEEcCCCCCCCc-cHHHHHhcCC---CCC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000522 673 -----SIAYVPQVPWILSG-TIRDNILFGK---NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1445)
Q Consensus 673 -----~i~y~~Q~p~l~~~-ti~~nI~~g~---~~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQk 739 (1445)
.++|++|+|.+++. |++||+.++. ..+ +++.+++++.+++... ......+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgG~~ 151 (233)
T PRK11629 83 ELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHR-----------ANHRPSELSGGER 151 (233)
T ss_pred HHHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHH
Confidence 38999999988875 9999998742 122 2344556666665432 2345578999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhhhCCEEEEEeCCEEEEecC
Q 000522 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGS 816 (1445)
Q Consensus 740 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~ 816 (1445)
||++||||++.+|+++||||||++||+.+.+.+.+. +.... .+|+|+|++||+++.+..+|++++|++|++++.|+
T Consensus 152 qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 152 QRVAIARALVNNPRLVLADEPTGNLDARNADSIFQL-LGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999888875 33211 24789999999999999889999999999998765
No 421
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=2e-34 Score=360.94 Aligned_cols=213 Identities=23% Similarity=0.347 Sum_probs=176.6
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCeeCCCCChHh-hhcc
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI--CGGQILVDGLNIINTPVRD-LRGR 1299 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~--~~G~I~IDG~di~~i~~~~-lR~~ 1299 (1445)
++++|++++|+. .++|+|+||++++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+... .|++
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999963 4699999999999999999999999999999999999987 7999999999998877654 4678
Q ss_pred eEEEcCCCcccCc-cHHHhcCCCCC-------CChHHHHHHHHHccHHHHHHhCCCchhh-hcCCCCCChhHHHHHHHHH
Q 000522 1300 FAVVPQSPFLFEG-SLRDNLDPFHM-------NDDLKIWSVLEKCHVKEEVEAVGLETFV-KESGISFSVGQRQLICLAR 1370 (1445)
Q Consensus 1300 i~~VpQdp~lF~g-TIReNLdp~~~-------~sd~ei~~aL~~~~l~~~i~~lgLdt~v-~e~G~~LSgGQrQrl~LAR 1370 (1445)
++||||+|.+|.. |+++|+..... ...++..+ ...+.++.+|++... ......||||||||++|||
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~LSgG~~qrv~iA~ 154 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYL-----RAKNLLRELQLDADNVTRPVGDYGGGQQQLVEIAK 154 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHH-----HHHHHHHHcCCCCCcccCchhhCCHHHHHHHHHHH
Confidence 9999999988875 99999865321 11111111 123344445664332 2334579999999999999
Q ss_pred HhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1371 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1371 ALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
||+++|+||||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|++++.
T Consensus 155 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (500)
T TIGR02633 155 ALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTM 228 (500)
T ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccC
Confidence 9999999999999999999999999999998753 47899999999999876 899999999999999988653
No 422
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.1e-34 Score=320.06 Aligned_cols=195 Identities=24% Similarity=0.310 Sum_probs=164.1
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++|++++|++ .++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNE--EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCC--ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 5999999999964 3699999999999999999999999999999999999999999999999998752 3466799
Q ss_pred EEcCCCcccCc-cHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1302 VVPQSPFLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1302 ~VpQdp~lF~g-TIReNLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
|+||+|.+|++ |+++|+.... ...++.+.++++.. |+..........||+|||||++||||++++|
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~---------~l~~~~~~~~~~LS~G~~qrv~laral~~~p 156 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIV---------GLAGYEDTLVRQLSAGQKKRLALARLWLSPA 156 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHc---------CChhhccCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 9999985421 11222333444444 4433344445679999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDH 1430 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~ 1430 (1445)
+||+|||||++||.++.+.+.+.+++.. +++|+|++||+++.+.+ ||++++++.
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 157 PLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999999998653 57999999999999875 699999875
No 423
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.1e-34 Score=323.84 Aligned_cols=191 Identities=26% Similarity=0.369 Sum_probs=156.5
Q ss_pred EEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000522 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1445)
Q Consensus 607 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1445)
+++|+++.|+.... .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~~~~--~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (218)
T cd03255 2 ELKNLSKTYGGGGE--KVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAF 79 (218)
T ss_pred eEeeeEEEecCCCc--ceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHH
Confidence 57889998853210 12469999999999999999999999999999999999999999998764
Q ss_pred ---eEEEEcCCCCCCCc-cHHHHHhcCCCC---C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 ---SIAYVPQVPWILSG-TIRDNILFGKNY---D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~~-ti~~nI~~g~~~---~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
.++|++|+|.++.. |++||+.++..+ + +++.+++++..+++... .....+||||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr 148 (218)
T cd03255 80 RRRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRL-----------NHYPSELSGGQQQR 148 (218)
T ss_pred HhhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhh-----------hcChhhcCHHHHHH
Confidence 38999999998876 999999876432 1 23445566666554322 34556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhhCCEEEEEeCCEE
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQV 811 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~~d~i~~l~~G~i 811 (1445)
++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+..||++++|++|++
T Consensus 149 v~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 149 VAIARALANDPKIILADEPTGNLDSETGKEVMEL-LRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 9999999999999999999999999998888776 333122 37899999999998888999999999974
No 424
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=2.2e-34 Score=325.15 Aligned_cols=199 Identities=25% Similarity=0.378 Sum_probs=164.5
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------e
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 673 (1445)
++++|++++|+. . ++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .
T Consensus 2 l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~ 75 (236)
T TIGR03864 2 LEVAGLSFAYGA---R---RALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALAR 75 (236)
T ss_pred EEEEeeEEEECC---E---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhh
Confidence 568899998852 2 359999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCCC-CCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000522 674 IAYVPQVPWI-LSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1445)
Q Consensus 674 i~y~~Q~p~l-~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 745 (1445)
++|++|++.+ ++.|++||+.++.. .++ ++..+.++..++. ...+....+||||||||++||
T Consensus 76 i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrl~la 144 (236)
T TIGR03864 76 LGVVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLA-----------ERADDKVRELNGGHRRRVEIA 144 (236)
T ss_pred EEEeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCh-----------hhhcCChhhCCHHHHHHHHHH
Confidence 8999999987 46799999986532 222 1233344444443 223556679999999999999
Q ss_pred HHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHHh
Q 000522 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
||++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+..||++++|++|++++.|+++++..
T Consensus 145 ral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (236)
T TIGR03864 145 RALLHRPALLLLDEPTVGLDPASRAAIVAH-VRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRG 221 (236)
T ss_pred HHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHH
Confidence 999999999999999999999999988876 33211 24789999999999988899999999999999999888754
No 425
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-34 Score=324.87 Aligned_cols=202 Identities=28% Similarity=0.402 Sum_probs=164.8
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|+++.|..... ..++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 i~~~~l~~~~~~~~~--~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (233)
T cd03258 2 IELKNVSKVFGDTGG--KVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRK 79 (233)
T ss_pred eEEecceEEccCCCC--ceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHH
Confidence 578999999853210 01469999999999999999999999999999999999999999998864
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 ---SIAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
.++|++|+|.++. .|++||+.++.. .+. ++..+.++..++... ......+||||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr 148 (233)
T cd03258 80 ARRRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDK-----------ADAYPAQLSGGQKQR 148 (233)
T ss_pred HHhheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhcChhhCCHHHHHH
Confidence 3899999999987 599999987532 221 233445555555432 234556899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhH
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 819 (1445)
++||||+..+|+++||||||++||+.+.+.+.+. +..... .++|+|++||+++.+.. ||++++|++|++++.|+.++
T Consensus 149 v~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 227 (233)
T cd03258 149 VGIARALANNPKVLLCDEATSALDPETTQSILAL-LRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEE 227 (233)
T ss_pred HHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHH
Confidence 9999999999999999999999999999888776 332122 37899999999999865 99999999999999999887
Q ss_pred HH
Q 000522 820 LA 821 (1445)
Q Consensus 820 ~~ 821 (1445)
+.
T Consensus 228 ~~ 229 (233)
T cd03258 228 VF 229 (233)
T ss_pred Hh
Confidence 64
No 426
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-34 Score=326.16 Aligned_cols=197 Identities=29% Similarity=0.365 Sum_probs=165.1
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------eEE
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIA 675 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~ 675 (1445)
..++++|++++|.. .++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++
T Consensus 11 ~~l~i~~l~~~~~~------~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~ 84 (257)
T PRK11247 11 TPLLLNAVSKRYGE------RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTR 84 (257)
T ss_pred CcEEEEEEEEEECC------cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceE
Confidence 45899999999852 2359999999999999999999999999999999999999999999876 489
Q ss_pred EEcCCCCCCC-ccHHHHHhcCCCC-ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCC
Q 000522 676 YVPQVPWILS-GTIRDNILFGKNY-DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSD 753 (1445)
Q Consensus 676 y~~Q~p~l~~-~ti~~nI~~g~~~-~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~ 753 (1445)
|++|+|.+++ .|++||+.++... .+++..++++..++.... .....+||||||||++||||++.+|+
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRA-----------NEWPAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHh-----------cCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999998887 5999999876321 234556667776665332 34567999999999999999999999
Q ss_pred EEEEcCCCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHh
Q 000522 754 IYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 818 (1445)
Q Consensus 754 illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~ 818 (1445)
++||||||++||+.+.+.+.+. +.... ..++|+|++||+++.+.. ||+|++|++|++++.|+.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDL-IESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999888775 33211 237899999999998765 9999999999999877643
No 427
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.9e-34 Score=322.91 Aligned_cols=199 Identities=27% Similarity=0.414 Sum_probs=161.6
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|+++.|.. . ++++|+||++++||+++|+||||||||||+++|.|.++|++|+|.++|
T Consensus 1 l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 74 (222)
T cd03224 1 LEVENLNAGYGK---S---QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERAR 74 (222)
T ss_pred CEEeeEEeecCC---e---eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHh
Confidence 357888988852 2 359999999999999999999999999999999999999999998875
Q ss_pred -eEEEEcCCCCCCCc-cHHHHHhcCCCCC-h----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000522 673 -SIAYVPQVPWILSG-TIRDNILFGKNYD-P----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1445)
Q Consensus 673 -~i~y~~Q~p~l~~~-ti~~nI~~g~~~~-~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 745 (1445)
.++|++|++.++.. |++||+.++.... . ++..++++.+. .+ ......+..+||||||||++||
T Consensus 75 ~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~------~l----~~~~~~~~~~LS~G~~qrv~la 144 (222)
T cd03224 75 AGIGYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP------RL----KERRKQLAGTLSGGEQQMLAIA 144 (222)
T ss_pred cCeEEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH------hh----hhhhhCchhhCCHHHHHHHHHH
Confidence 38999999998876 9999998764321 1 12223333321 11 1223456778999999999999
Q ss_pred HHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHH
Q 000522 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1445)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~ 821 (1445)
||+..+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++.+.|+.+++.
T Consensus 145 ral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 145 RALMSRPKLLLLDEPSEGLAPKIVEEIFEA-IRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HHHhcCCCEEEECCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 999999999999999999999999988876 33312257899999999998765 9999999999999999887764
No 428
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=329.53 Aligned_cols=205 Identities=23% Similarity=0.343 Sum_probs=170.3
Q ss_pred CCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC----
Q 000522 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG---- 672 (1445)
Q Consensus 602 ~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~---- 672 (1445)
.+..++++|+++.|.. . .+|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 16 ~~~~l~~~nl~~~~~~---~---~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~ 89 (267)
T PRK14235 16 TEIKMRARDVSVFYGE---K---QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIY 89 (267)
T ss_pred CCceEEEEeEEEEECC---E---EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECc
Confidence 3457999999999852 2 359999999999999999999999999999999999974 899998865
Q ss_pred -----------eEEEEcCCCCCCCccHHHHHhcCCC---C--C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCC
Q 000522 673 -----------SIAYVPQVPWILSGTIRDNILFGKN---Y--D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGV 732 (1445)
Q Consensus 673 -----------~i~y~~Q~p~l~~~ti~~nI~~g~~---~--~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~ 732 (1445)
.++|++|+|.+++.|++||+.++.. . . .++..++++.+++..++. +..+..+.
T Consensus 90 ~~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~ 162 (267)
T PRK14235 90 DPRLDVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGT 162 (267)
T ss_pred ccccchHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcc
Confidence 3899999999998899999987532 1 1 123455666666644322 12356678
Q ss_pred ccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEE
Q 000522 733 NLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQV 811 (1445)
Q Consensus 733 ~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i 811 (1445)
+||||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i 240 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEEL-IDE-LRQNYTIVIVTHSMQQAARVSQRTAFFHLGNL 240 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHH-HHH-HhcCCeEEEEEcCHHHHHhhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999998888775 433 3446899999999999865 999999999999
Q ss_pred EEecCHhHHH
Q 000522 812 KWIGSSADLA 821 (1445)
Q Consensus 812 ~~~g~~~~~~ 821 (1445)
++.|+.+++.
T Consensus 241 ~~~g~~~~~~ 250 (267)
T PRK14235 241 VEVGDTEKMF 250 (267)
T ss_pred EEeCCHHHHH
Confidence 9999988875
No 429
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=369.05 Aligned_cols=216 Identities=24% Similarity=0.346 Sum_probs=186.7
Q ss_pred cEEEEEEEEEeCCC--CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhh---
Q 000522 1222 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDL--- 1296 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~l--- 1296 (1445)
.++++|++++|+.+ .+++|+|+||+|++||+++|+|++|||||||+++|.|+++|++|+|.+||.++...+.+++
T Consensus 4 ~l~~~nl~~~y~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 83 (648)
T PRK10535 4 LLELKDIRRSYPSGEEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGQDVATLDADALAQL 83 (648)
T ss_pred EEEEeeEEEEeCCCCCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEcCcCCHHHHHHH
Confidence 48999999999643 2469999999999999999999999999999999999999999999999999999887664
Q ss_pred -hcceEEEcCCCcccCc-cHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHH
Q 000522 1297 -RGRFAVVPQSPFLFEG-SLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARA 1371 (1445)
Q Consensus 1297 -R~~i~~VpQdp~lF~g-TIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARA 1371 (1445)
|++++|+||+|.+|++ |+.||++... ..+.++ .+....+.++.+|++..+.....+||+||+||++||||
T Consensus 84 ~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~-----~~~~~~~~l~~lgl~~~~~~~~~~LS~Gq~qrv~LAra 158 (648)
T PRK10535 84 RREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGLERKQ-----RLLRAQELLQRLGLEDRVEYQPSQLSGGQQQRVSIARA 158 (648)
T ss_pred HhccEEEEeCCcccCCCCCHHHHHHHHHHHcCCCHHH-----HHHHHHHHHHHCCChhhhcCCcccCCHHHHHHHHHHHH
Confidence 6789999999999975 9999996421 111111 11123445555677777777778999999999999999
Q ss_pred hccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhhcCEEEEEeCCeEeeecCCCCC
Q 000522 1372 LLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1372 LLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
++++|++|||||||++||.++.+.+.+.|++.. +++|+|+|+|+++.+..|||+++|++|+++|.|++++-
T Consensus 159 L~~~P~lLllDEP~~gLD~~s~~~l~~ll~~l~~~g~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 230 (648)
T PRK10535 159 LMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAQEK 230 (648)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEECCCHHHHHhCCEEEEEECCEEEeecCcccc
Confidence 999999999999999999999999999998764 58999999999999989999999999999999999865
No 430
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=333.10 Aligned_cols=206 Identities=25% Similarity=0.400 Sum_probs=167.9
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|..... ..+++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~~~~~~~-~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 80 (287)
T PRK13641 2 SIKFENVDYIYSPGTP-MEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNL 80 (287)
T ss_pred EEEEEEEEEEcCCCCC-ccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchH
Confidence 4678999999963211 012469999999999999999999999999999999999999999998866
Q ss_pred -----eEEEEcCCC--CCCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000522 673 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1445)
Q Consensus 673 -----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQ 738 (1445)
.++|++|+| .+++.|++|||.++.. .+. ++.+++++.+++..+. ......+|||||
T Consensus 81 ~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq 150 (287)
T PRK13641 81 KKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDL----------ISKSPFELSGGQ 150 (287)
T ss_pred HHHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhH----------hhCCcccCCHHH
Confidence 379999998 5777899999987532 221 2345566666664222 234567899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCH
Q 000522 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 817 (1445)
Q Consensus 739 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~ 817 (1445)
|||++||||+..+|+++||||||++||+...+.+.+. +.....+|.|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~-l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~ 229 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQL-FKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASP 229 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999998888775 43312347899999999998765 999999999999999999
Q ss_pred hHHHh
Q 000522 818 ADLAV 822 (1445)
Q Consensus 818 ~~~~~ 822 (1445)
+++..
T Consensus 230 ~~~~~ 234 (287)
T PRK13641 230 KEIFS 234 (287)
T ss_pred HHHhc
Confidence 88754
No 431
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.6e-34 Score=321.38 Aligned_cols=192 Identities=30% Similarity=0.427 Sum_probs=157.9
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------eE
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 674 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 674 (1445)
++++|+++.|.. . ++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 i~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i 74 (213)
T cd03301 1 VELENVTKRFGN---V---TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDI 74 (213)
T ss_pred CEEEeeEEEECC---e---eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceE
Confidence 357889998853 2 359999999999999999999999999999999999999999999875 38
Q ss_pred EEEcCCCCCCC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHH
Q 000522 675 AYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 746 (1445)
Q Consensus 675 ~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lAR 746 (1445)
+|++|++.+++ .|++||+.++.. .++ ++..+.++..+++.. ......+||||||||++|||
T Consensus 75 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qr~~lar 143 (213)
T cd03301 75 AMVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHL-----------LDRKPKQLSGGQRQRVALGR 143 (213)
T ss_pred EEEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHH-----------HhCChhhCCHHHHHHHHHHH
Confidence 99999999885 599999987532 222 233445555555432 23455689999999999999
Q ss_pred HHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEEEEec
Q 000522 747 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 747 aly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1445)
|++.+|++++|||||++||+.+.+.+.+. +..... +++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 144 al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 144 AIVREPKVFLMDEPLSNLDAKLRVQMRAE-LKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999988876 332122 37899999999998775 9999999999998765
No 432
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.7e-34 Score=321.07 Aligned_cols=188 Identities=32% Similarity=0.437 Sum_probs=154.8
Q ss_pred EEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------eEEEEcC
Q 000522 608 MQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------SIAYVPQ 679 (1445)
Q Consensus 608 ~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------~i~y~~Q 679 (1445)
++|+++.|.. ..+++|+||++++||+++|+||||||||||+++|.|+++|++|+|.++| .++|++|
T Consensus 2 ~~~l~~~~~~------~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q 75 (213)
T cd03235 2 VEDLTVSYGG------HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQ 75 (213)
T ss_pred cccceeEECC------EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEecc
Confidence 5677888742 2359999999999999999999999999999999999999999999987 3999999
Q ss_pred CCCC---CCccHHHHHhcCCCC-----------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000522 680 VPWI---LSGTIRDNILFGKNY-----------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1445)
Q Consensus 680 ~p~l---~~~ti~~nI~~g~~~-----------~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 745 (1445)
+|.+ ++.|++||+.++... ++++.+++++.++++.... ....+||||||||++||
T Consensus 76 ~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~la 144 (213)
T cd03235 76 RRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELAD-----------RQIGELSGGQQQRVLLA 144 (213)
T ss_pred ccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHHHHH
Confidence 9876 557999999875321 1234566777777754333 34468999999999999
Q ss_pred HHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEe
Q 000522 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1445)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1445)
||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++| +++.
T Consensus 145 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~ 212 (213)
T cd03235 145 RALVQDPDLLLLDEPFAGVDPKTQEDIYEL-LRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVAS 212 (213)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-Eeec
Confidence 999999999999999999999999988876 33212257899999999999865 9999999886 4443
No 433
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-34 Score=331.58 Aligned_cols=203 Identities=28% Similarity=0.384 Sum_probs=169.7
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCC---eEEEEcC--------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTH---GSIHASG-------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~---G~i~~~~-------- 672 (1445)
..++++|+++.|+.. . .++++|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|
T Consensus 4 ~~l~i~~l~~~~~~~-~---~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~ 79 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-K---KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTV 79 (282)
T ss_pred ceEEEEEEEEEcCCC-C---ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCH
Confidence 468899999998532 1 235999999999999999999999999999999999999988 8998875
Q ss_pred -----eEEEEcCCCC--CCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000522 673 -----SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1445)
Q Consensus 673 -----~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQ 738 (1445)
.+|||+|+|+ +++.|++|||.|+.. .+. ++..++++.++|.... .....+|||||
T Consensus 80 ~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-----------~~~~~~LS~G~ 148 (282)
T PRK13640 80 WDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYI-----------DSEPANLSGGQ 148 (282)
T ss_pred HHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHh-----------cCCcccCCHHH
Confidence 4899999995 567899999988632 222 2355667777775433 33446999999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhhCCEEEEEeCCEEEEecCH
Q 000522 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSS 817 (1445)
Q Consensus 739 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~ 817 (1445)
|||++||||++.+|+++||||||++||+.+.+.+.+. +..... .|+|+|++||+++.+..||++++|++|++++.|++
T Consensus 149 ~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~ 227 (282)
T PRK13640 149 KQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKL-IRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSP 227 (282)
T ss_pred HHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999988876 333122 37899999999999888999999999999999999
Q ss_pred hHHHh
Q 000522 818 ADLAV 822 (1445)
Q Consensus 818 ~~~~~ 822 (1445)
+++..
T Consensus 228 ~~~~~ 232 (282)
T PRK13640 228 VEIFS 232 (282)
T ss_pred HHHhc
Confidence 88754
No 434
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=328.78 Aligned_cols=206 Identities=25% Similarity=0.327 Sum_probs=172.0
Q ss_pred CCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC----
Q 000522 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG---- 672 (1445)
Q Consensus 602 ~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~---- 672 (1445)
....++++|+++.|+. +++|+|+||++++||+++|+|+||||||||+++|.|+++ |++|+|.++|
T Consensus 17 ~~~~l~~~nl~~~~~~------~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~ 90 (267)
T PRK14237 17 EEIALSTKDLHVYYGK------KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDIN 90 (267)
T ss_pred CCeEEEEeeEEEEECC------eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcc
Confidence 4457899999999842 235999999999999999999999999999999999986 5899998765
Q ss_pred -----------eEEEEcCCCCCCCccHHHHHhcCCC----CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000522 673 -----------SIAYVPQVPWILSGTIRDNILFGKN----YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 733 (1445)
Q Consensus 673 -----------~i~y~~Q~p~l~~~ti~~nI~~g~~----~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~ 733 (1445)
.++|++|+|.+++.|++|||.++.. .+ +++..++++.+++..++. +..+..+.+
T Consensus 91 ~~~~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~ 163 (267)
T PRK14237 91 RKEINVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALT 163 (267)
T ss_pred cccCChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCccc
Confidence 3899999999998999999987532 12 133455667777654432 234567789
Q ss_pred cchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEE
Q 000522 734 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK 812 (1445)
Q Consensus 734 LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~ 812 (1445)
||||||||++||||++.+|++++|||||++||+.+.+.+.+. +.. +.++.|+|++||+++.+.. ||++++|++|+++
T Consensus 164 LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~ 241 (267)
T PRK14237 164 LSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEET-MFE-LKKNYTIIIVTHNMQQAARASDYTAFFYLGDLI 241 (267)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEecCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999998888775 333 3456899999999998865 9999999999999
Q ss_pred EecCHhHHHh
Q 000522 813 WIGSSADLAV 822 (1445)
Q Consensus 813 ~~g~~~~~~~ 822 (1445)
+.|+++++..
T Consensus 242 ~~g~~~~~~~ 251 (267)
T PRK14237 242 EYDKTRNIFT 251 (267)
T ss_pred EeCCHHHHhc
Confidence 9999988753
No 435
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-34 Score=325.91 Aligned_cols=200 Identities=25% Similarity=0.388 Sum_probs=163.3
Q ss_pred EEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------e
Q 000522 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------S 673 (1445)
Q Consensus 607 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------~ 673 (1445)
+++|+++.|... ..+|+|+||++++|++++|+||||||||||+++|.|+++|++|+|.++| .
T Consensus 2 ~~~~l~~~~~~~-----~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 76 (242)
T cd03295 2 EFENVTKRYGGG-----KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRK 76 (242)
T ss_pred EEEEEEEEeCCc-----ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcc
Confidence 578899988631 2359999999999999999999999999999999999999999998875 4
Q ss_pred EEEEcCCCCCCC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000522 674 IAYVPQVPWILS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1445)
Q Consensus 674 i~y~~Q~p~l~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 745 (1445)
++|++|+|.++. .|++||+.++.. .+. ++..++++..++.. .......+.+||||||||++||
T Consensus 77 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~---------~~~~~~~~~~LS~G~~qrv~la 147 (242)
T cd03295 77 IGYVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDP---------AEFADRYPHELSGGQQQRVGVA 147 (242)
T ss_pred eEEEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCc---------HHHHhcChhhCCHHHHHHHHHH
Confidence 899999999886 599999987532 221 23344555555542 0123456679999999999999
Q ss_pred HHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHH
Q 000522 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1445)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~ 821 (1445)
||++.+|++++|||||++||+.+.+.+.+. +..... +++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 ral~~~p~llllDEPt~~LD~~~~~~l~~~-L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 224 (242)
T cd03295 148 RALAADPPLLLMDEPFGALDPITRDQLQEE-FKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEIL 224 (242)
T ss_pred HHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999998888776 332112 37899999999998765 9999999999999999988764
No 436
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.9e-34 Score=335.38 Aligned_cols=202 Identities=26% Similarity=0.389 Sum_probs=166.8
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1445)
..++++|+++.|.. ..+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~~i~~~~l~~~~~~------~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~ 76 (303)
T TIGR01288 3 VAIDLVGVSKSYGD------KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLAR 76 (303)
T ss_pred cEEEEEeEEEEeCC------eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHh
Confidence 46889999999852 2359999999999999999999999999999999999999999999875
Q ss_pred -eEEEEcCCCCCCC-ccHHHHHhc-CC--CCCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHH
Q 000522 673 -SIAYVPQVPWILS-GTIRDNILF-GK--NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLA 743 (1445)
Q Consensus 673 -~i~y~~Q~p~l~~-~ti~~nI~~-g~--~~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~ 743 (1445)
.+||++|++.++. .|++||+.+ +. ..+. ++.+++++.+++... ......+||||||||++
T Consensus 77 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-----------~~~~~~~LSgG~~qrv~ 145 (303)
T TIGR01288 77 VAIGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-----------ADVRVALLSGGMKRRLT 145 (303)
T ss_pred hcEEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhH-----------hcCchhhCCHHHHHHHH
Confidence 4999999998885 599999974 22 1222 223344555555332 23345689999999999
Q ss_pred HHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHHh
Q 000522 744 LARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 744 lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
||||++.+|+++||||||++||+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 146 la~al~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 146 LARALINDPQLLILDEPTTGLDPHARHLIWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999988876 33212357899999999999875 99999999999999999999864
Q ss_pred c
Q 000522 823 S 823 (1445)
Q Consensus 823 ~ 823 (1445)
.
T Consensus 225 ~ 225 (303)
T TIGR01288 225 E 225 (303)
T ss_pred h
Confidence 3
No 437
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.6e-34 Score=343.11 Aligned_cols=200 Identities=26% Similarity=0.405 Sum_probs=168.2
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|++++|.. ..+|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.++|
T Consensus 3 ~L~~~nls~~y~~------~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~ 76 (402)
T PRK09536 3 MIDVSDLSVEFGD------TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAAS 76 (402)
T ss_pred eEEEeeEEEEECC------EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHh
Confidence 4789999999852 2359999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCCCC-CCccHHHHHhcCCC-----C------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHH
Q 000522 673 -SIAYVPQVPWI-LSGTIRDNILFGKN-----Y------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQR 739 (1445)
Q Consensus 673 -~i~y~~Q~p~l-~~~ti~~nI~~g~~-----~------~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQk 739 (1445)
.+|||+|++.+ ++.|++||+.++.. + +.++.+++++..++.... .....+||||||
T Consensus 77 ~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~-----------~~~~~~LSgGer 145 (402)
T PRK09536 77 RRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFA-----------DRPVTSLSGGER 145 (402)
T ss_pred cceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHH
Confidence 49999999987 56799999988641 1 123455666666664322 234568999999
Q ss_pred HHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHh
Q 000522 740 ARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSA 818 (1445)
Q Consensus 740 qRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~ 818 (1445)
||++|||||+++|++++|||||++||+.....+++. +.....+++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 146 QRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~l-L~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ 224 (402)
T PRK09536 146 QRVLLARALAQATPVLLLDEPTASLDINHQVRTLEL-VRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPA 224 (402)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHH
Confidence 999999999999999999999999999998888875 33212247899999999999865 9999999999999999999
Q ss_pred HHHh
Q 000522 819 DLAV 822 (1445)
Q Consensus 819 ~~~~ 822 (1445)
++..
T Consensus 225 ev~~ 228 (402)
T PRK09536 225 DVLT 228 (402)
T ss_pred HHhC
Confidence 8754
No 438
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.3e-34 Score=324.46 Aligned_cols=197 Identities=26% Similarity=0.370 Sum_probs=162.2
Q ss_pred EEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000522 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1445)
Q Consensus 607 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1445)
+++|+++.|+. . .+|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 75 (232)
T cd03218 2 RAENLSKRYGK---R---KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARL 75 (232)
T ss_pred eEEEEEEEeCC---E---EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhc
Confidence 57889998852 2 359999999999999999999999999999999999999999998865
Q ss_pred eEEEEcCCCCCCCc-cHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHH
Q 000522 673 SIAYVPQVPWILSG-TIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 744 (1445)
Q Consensus 673 ~i~y~~Q~p~l~~~-ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~l 744 (1445)
.++|++|++.++++ |++||+.++.+ .+. ++.++.++..++.. .......+||||||||++|
T Consensus 76 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~l 144 (232)
T cd03218 76 GIGYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITH-----------LRKSKASSLSGGERRRVEI 144 (232)
T ss_pred cEEEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHHHHHHH
Confidence 38999999998876 99999987532 111 22334444444432 2345667999999999999
Q ss_pred HHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHH
Q 000522 745 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1445)
Q Consensus 745 ARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~ 821 (1445)
|||+..+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++.+.|+.+++.
T Consensus 145 a~al~~~p~llllDEPt~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 221 (232)
T cd03218 145 ARALATNPKFLLLDEPFAGVDPIAVQDIQKI-IKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIA 221 (232)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhh
Confidence 9999999999999999999999999888875 33212347899999999987665 9999999999999999988764
No 439
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-34 Score=330.52 Aligned_cols=206 Identities=24% Similarity=0.376 Sum_probs=171.1
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|++++|+...+...+++|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 47899999999643210113469999999999999999999999999999999999999999998875
Q ss_pred --eEEEEcCCCC--CCCccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 --SIAYVPQVPW--ILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 --~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
.++|++|+|. +++.|+.||+.|+.. .+ +++.+++++.++|..... ....+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRR-----------HAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHH
Confidence 3899999985 666799999998632 12 234566777777765443 3346899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHH
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 820 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~ 820 (1445)
++||||++.+|+++||||||++||+.+.+.+.+. +..... ++.|+|++||+++.+..||++++|++|++++.|+++++
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNT-IKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEI 231 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988875 333112 37899999999999888999999999999999999987
Q ss_pred Hh
Q 000522 821 AV 822 (1445)
Q Consensus 821 ~~ 822 (1445)
..
T Consensus 232 ~~ 233 (280)
T PRK13633 232 FK 233 (280)
T ss_pred hc
Confidence 54
No 440
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-34 Score=320.30 Aligned_cols=190 Identities=24% Similarity=0.353 Sum_probs=158.3
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------e
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 673 (1445)
++++|+++.|.. . ++++|+||++++| +++|+||||||||||+++|.|+++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~---~---~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 73 (211)
T cd03264 1 LQLENLTKRYGK---K---RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRR 73 (211)
T ss_pred CEEEEEEEEECC---E---EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhh
Confidence 367899998853 2 3599999999999 9999999999999999999999999999999876 4
Q ss_pred EEEEcCCCCCCCc-cHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000522 674 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1445)
Q Consensus 674 i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 745 (1445)
++|++|+|.++.. |++||+.+... .+ +++.+++++.+++....+ ....+||||||||++||
T Consensus 74 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la 142 (211)
T cd03264 74 IGYLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAK-----------KKIGSLSGGMRRRVGIA 142 (211)
T ss_pred eEEecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHh-----------CchhhCCHHHHHHHHHH
Confidence 8999999998876 99999986421 11 234556667666654322 34468999999999999
Q ss_pred HHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEec
Q 000522 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1445)
||++++|+++||||||++||+.+.+++.+. +.. ..+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 143 ~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 143 QALVGDPSILIVDEPTAGLDPEERIRFRNL-LSE-LGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999999988876 333 3346899999999999865 9999999999998754
No 441
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=327.03 Aligned_cols=204 Identities=23% Similarity=0.338 Sum_probs=167.3
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCcc--C---CCeEEEEcC------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM--L---THGSIHASG------ 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~--~---~~G~i~~~~------ 672 (1445)
..++++|+++.|.. .++|+|+||+|++||+++|+|+||||||||+++|+|.++ | ++|+|.++|
T Consensus 11 ~~l~i~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~ 84 (259)
T PRK14274 11 EVYQINGMNLWYGQ------HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKG 84 (259)
T ss_pred ceEEEeeEEEEECC------eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEcccc
Confidence 46899999998852 235999999999999999999999999999999999987 3 689998764
Q ss_pred ---------eEEEEcCCCCCCCccHHHHHhcCCCC----Chh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000522 673 ---------SIAYVPQVPWILSGTIRDNILFGKNY----DPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1445)
Q Consensus 673 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~~----~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LS 735 (1445)
.+||++|+|.+++.|++||+.++... +++ +..++++..++.+++. +.....+.+||
T Consensus 85 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS 157 (259)
T PRK14274 85 KVDLVELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLS 157 (259)
T ss_pred ccCHHHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCC
Confidence 38999999999989999999876321 211 2334455555543221 22356778999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEe
Q 000522 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1445)
Q Consensus 736 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1445)
||||||++||||++.+|++++|||||++||+++.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.
T Consensus 158 ~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~ 235 (259)
T PRK14274 158 GGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEEL-ILK-LKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVEC 235 (259)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHH-HhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999998888765 433 3456899999999998765 999999999999999
Q ss_pred cCHhHHHh
Q 000522 815 GSSADLAV 822 (1445)
Q Consensus 815 g~~~~~~~ 822 (1445)
|+++++..
T Consensus 236 g~~~~~~~ 243 (259)
T PRK14274 236 NDTNKMFS 243 (259)
T ss_pred CCHHHHhh
Confidence 99998754
No 442
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.1e-34 Score=309.40 Aligned_cols=166 Identities=33% Similarity=0.550 Sum_probs=148.8
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------e
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 673 (1445)
++++|+++.|.... +++++|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 1 i~~~~~~~~~~~~~----~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (178)
T cd03247 1 LSINNVSFSYPEQE----QQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSL 76 (178)
T ss_pred CEEEEEEEEeCCCC----ccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhh
Confidence 35789999986421 2359999999999999999999999999999999999999999999886 3
Q ss_pred EEEEcCCCCCCCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCC
Q 000522 674 IAYVPQVPWILSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSD 753 (1445)
Q Consensus 674 i~y~~Q~p~l~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~ 753 (1445)
++|++|+|++++.|++||| ..+||||||||++||||++.+|+
T Consensus 77 i~~~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~ 118 (178)
T cd03247 77 ISVLNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAP 118 (178)
T ss_pred EEEEccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCC
Confidence 8999999999999999998 45899999999999999999999
Q ss_pred EEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCCEEEEec
Q 000522 754 IYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 754 illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g 815 (1445)
+++|||||++||+.+.+.+++. +.. +.+++|+|++||+.+.++.||++++|++|++++.|
T Consensus 119 ~lllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 119 IVLLDEPTVGLDPITERQLLSL-IFE-VLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEEECCcccCCHHHHHHHHHH-HHH-HcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999888876 333 34578999999999999889999999999998654
No 443
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=366.55 Aligned_cols=215 Identities=24% Similarity=0.341 Sum_probs=173.9
Q ss_pred cEEEEEEEEEeCCC--CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCC----------
Q 000522 1222 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII---------- 1289 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~---------- 1289 (1445)
.|+++|++++|+.. ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 69999999999632 236999999999999999999999999999999999999999999999998652
Q ss_pred CCChH---hhh-cceEEEcCCC--cccCc-cHHHhcCCCC----CCChHHHHHHHHHccHHHHHHhCCCc---hhhhcCC
Q 000522 1290 NTPVR---DLR-GRFAVVPQSP--FLFEG-SLRDNLDPFH----MNDDLKIWSVLEKCHVKEEVEAVGLE---TFVKESG 1355 (1445)
Q Consensus 1290 ~i~~~---~lR-~~i~~VpQdp--~lF~g-TIReNLdp~~----~~sd~ei~~aL~~~~l~~~i~~lgLd---t~v~e~G 1355 (1445)
+.+.. .+| ++|++|+|+| .+++. ||++|+.... ..+..+..+ .+.+.++.+|+. .......
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~gL~~~~~~~~~~~ 166 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMV-----EAKRMLDQVRIPEAQTILSRYP 166 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHCCCCChhhHHhCCC
Confidence 22322 334 5799999999 57764 9999986421 112211111 112333344553 2355666
Q ss_pred CCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-C-CcEEEEeccChhHHhh-cCEEEEEeCCe
Q 000522 1356 ISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-K-GMTVITIAHRISTVLN-MDEILILDHGH 1432 (1445)
Q Consensus 1356 ~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~-~~TvI~IaHrl~ti~~-~DrI~Vl~~G~ 1432 (1445)
.+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. + ++|||+|||+++.+.. ||||++|++|+
T Consensus 167 ~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~G~ 246 (623)
T PRK10261 167 HQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQGE 246 (623)
T ss_pred ccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeCCe
Confidence 7899999999999999999999999999999999999999999998864 3 8999999999999865 89999999999
Q ss_pred EeeecCCCC
Q 000522 1433 LPHCGCAAA 1441 (1445)
Q Consensus 1433 vvE~G~p~~ 1441 (1445)
|+|.|++++
T Consensus 247 i~~~g~~~~ 255 (623)
T PRK10261 247 AVETGSVEQ 255 (623)
T ss_pred ecccCCHHH
Confidence 999998754
No 444
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-34 Score=327.22 Aligned_cols=203 Identities=26% Similarity=0.322 Sum_probs=168.1
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcC---ccC--CCeEEEEcC-------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGE---MML--THGSIHASG------- 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~---~~~--~~G~i~~~~------- 672 (1445)
.++++|+++.|.. ..+|+|+||++++||+++|+|+||||||||+++|.|. .++ ++|+|.++|
T Consensus 3 ~l~~~~~~~~~~~------~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~ 76 (250)
T PRK14245 3 KIDARDVNFWYGD------FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKG 76 (250)
T ss_pred EEEEEEEEEEECC------EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEeccccc
Confidence 5789999999852 2359999999999999999999999999999999996 454 589998764
Q ss_pred --------eEEEEcCCCCCCCccHHHHHhcCCCC----C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000522 673 --------SIAYVPQVPWILSGTIRDNILFGKNY----D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1445)
Q Consensus 673 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSG 736 (1445)
.++|++|+|.+++.|++||+.++... + +++.+++++.+++..++. +..+..+.+|||
T Consensus 77 ~~~~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 149 (250)
T PRK14245 77 VQVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVK-------DKLKESAFALSG 149 (250)
T ss_pred ccHHHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchh-------hhhhCCcccCCH
Confidence 38999999999989999999875321 1 233456666666644332 223566789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEec
Q 000522 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 737 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1445)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 150 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~ 227 (250)
T PRK14245 150 GQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEEL-IHE-LKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYD 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEEC
Confidence 999999999999999999999999999999999988876 333 3457899999999999865 9999999999999999
Q ss_pred CHhHHHh
Q 000522 816 SSADLAV 822 (1445)
Q Consensus 816 ~~~~~~~ 822 (1445)
+++++..
T Consensus 228 ~~~~~~~ 234 (250)
T PRK14245 228 DTKKIFT 234 (250)
T ss_pred CHHHHhc
Confidence 9998753
No 445
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-34 Score=331.12 Aligned_cols=201 Identities=23% Similarity=0.360 Sum_probs=168.8
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|... ..+|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~-----~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~ 79 (283)
T PRK13636 5 ILKVEELNYNYSDG-----THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMK 79 (283)
T ss_pred eEEEEeEEEEeCCC-----CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHH
Confidence 58899999999521 2359999999999999999999999999999999999999999998876
Q ss_pred ---eEEEEcCCC--CCCCccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHH
Q 000522 673 ---SIAYVPQVP--WILSGTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 740 (1445)
Q Consensus 673 ---~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkq 740 (1445)
.++|++|+| .+++.|++||+.++.. +. .++..++++.++|... ......+|||||||
T Consensus 80 ~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LS~G~~q 148 (283)
T PRK13636 80 LRESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHL-----------KDKPTHCLSFGQKK 148 (283)
T ss_pred HHhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhCCcccCCHHHHH
Confidence 389999998 5778899999987532 12 2345566666666432 24567799999999
Q ss_pred HHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhh-hCCEEEEEeCCEEEEecCHh
Q 000522 741 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSA 818 (1445)
Q Consensus 741 Rv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~~~ 818 (1445)
|++||||++.+|+++||||||++||+...+.+.+. +..... .|+|+|++||+++.+. .||++++|++|++++.|+++
T Consensus 149 rl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~ 227 (283)
T PRK13636 149 RVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKL-LVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPK 227 (283)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999888775 332122 2789999999999987 59999999999999999998
Q ss_pred HHHh
Q 000522 819 DLAV 822 (1445)
Q Consensus 819 ~~~~ 822 (1445)
++..
T Consensus 228 ~~~~ 231 (283)
T PRK13636 228 EVFA 231 (283)
T ss_pred HHhc
Confidence 8754
No 446
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.6e-34 Score=320.84 Aligned_cols=196 Identities=21% Similarity=0.337 Sum_probs=160.5
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------e
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------S 673 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~ 673 (1445)
++++|+++.|+... ...++++|+||++++|++++|+|+||||||||+++|.|+++|++|+|.++| .
T Consensus 2 l~~~~v~~~~~~~~--~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (218)
T cd03266 2 ITADALTKRFRDVK--KTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRR 79 (218)
T ss_pred eEEEEEEEecCCCC--ccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhh
Confidence 57889999986421 112469999999999999999999999999999999999999999999875 4
Q ss_pred EEEEcCCCCCCCc-cHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHH
Q 000522 674 IAYVPQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALA 745 (1445)
Q Consensus 674 i~y~~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lA 745 (1445)
++|++|+|.+++. |++||+.+... .+ .++..+.++..++... ......+||||||||++||
T Consensus 80 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la 148 (218)
T cd03266 80 LGFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEEL-----------LDRRVGGFSTGMRQKVAIA 148 (218)
T ss_pred EEEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhhhhhhcCHHHHHHHHHH
Confidence 8999999998875 99999976421 11 2234555666655432 3446678999999999999
Q ss_pred HHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEec
Q 000522 746 RAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 746 Raly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1445)
||++.+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+.+.+.. ||++++|++|++.+.|
T Consensus 149 ral~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 149 RALVHDPPVLLLDEPTTGLDVMATRALREF-IRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHHhcCCCEEEEcCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999998888776 33212347899999999998765 9999999999998654
No 447
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=3.6e-34 Score=316.57 Aligned_cols=194 Identities=22% Similarity=0.298 Sum_probs=163.8
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.++++|++++|+. ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .. .|++++
T Consensus 2 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~~-~~~~~~ 76 (207)
T PRK13539 2 MLEGEDLACVRGG--RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--PD-VAEACH 76 (207)
T ss_pred EEEEEeEEEEECC--eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--hh-hHhhcE
Confidence 3789999999964 369999999999999999999999999999999999999999999999998753 22 788999
Q ss_pred EEcCCCccc-CccHHHhcCCCC---CCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCC
Q 000522 1302 VVPQSPFLF-EGSLRDNLDPFH---MNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSK 1377 (1445)
Q Consensus 1302 ~VpQdp~lF-~gTIReNLdp~~---~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ 1377 (1445)
+++|++.++ ..|+++|+.... ...++++.++++..++.+. .......||+|||||++||||++++|+
T Consensus 77 ~~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~---------~~~~~~~LS~G~~qrl~la~al~~~p~ 147 (207)
T PRK13539 77 YLGHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLAPL---------AHLPFGYLSAGQKRRVALARLLVSNRP 147 (207)
T ss_pred EecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHH---------HcCChhhcCHHHHHHHHHHHHHhcCCC
Confidence 999988765 579999986432 1234455666666655432 233334799999999999999999999
Q ss_pred EEEEeccccCCCHHHHHHHHHHHHHh-CCCcEEEEeccChhHHhhcCEEEEEeC
Q 000522 1378 VLCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEILILDH 1430 (1445)
Q Consensus 1378 ILlLDEaTS~lD~~te~~Iq~~I~~~-~~~~TvI~IaHrl~ti~~~DrI~Vl~~ 1430 (1445)
+|||||||++||..+.+.+.+.|++. -+++|+|++||+++.+.. |+++.++.
T Consensus 148 llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 148 IWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 99999999999999999999999865 358999999999999998 99988854
No 448
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.9e-34 Score=362.92 Aligned_cols=215 Identities=23% Similarity=0.385 Sum_probs=173.8
Q ss_pred cEEEEEEEEEeCCC--CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC-----CCcEEEECCeeCCCCChH
Q 000522 1222 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPI-----CGGQILVDGLNIINTPVR 1294 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~-----~~G~I~IDG~di~~i~~~ 1294 (1445)
.++++|++++|+.+ ..++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 58999999999632 24699999999999999999999999999999999999987 799999999999877654
Q ss_pred h---hh-cceEEEcCCCc--ccC-ccHHHhcCCC----CCCChHHHHHHHHHccHHHHHHhCCCch---hhhcCCCCCCh
Q 000522 1295 D---LR-GRFAVVPQSPF--LFE-GSLRDNLDPF----HMNDDLKIWSVLEKCHVKEEVEAVGLET---FVKESGISFSV 1360 (1445)
Q Consensus 1295 ~---lR-~~i~~VpQdp~--lF~-gTIReNLdp~----~~~sd~ei~~aL~~~~l~~~i~~lgLdt---~v~e~G~~LSg 1360 (1445)
. .| ++++||||+|. +++ -|+++|+... ...+.++..+ .+.+.++.+|++. .......+|||
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~gl~~~~~~~~~~~~~LSg 159 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARG-----EILNCLDRVGIRQAAKRLTDYPHQLSG 159 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHCCCCChHHHHhhCCcccCH
Confidence 3 34 57999999985 444 4899987521 1112211111 1223333345532 23455668999
Q ss_pred hHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeec
Q 000522 1361 GQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLN-MDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1361 GQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G 1437 (1445)
|||||++|||||+.+|++||||||||+||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|
T Consensus 160 Ge~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g 239 (529)
T PRK15134 160 GERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVEQN 239 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999998753 37899999999998875 8999999999999999
Q ss_pred CCCC
Q 000522 1438 CAAA 1441 (1445)
Q Consensus 1438 ~p~~ 1441 (1445)
+|++
T Consensus 240 ~~~~ 243 (529)
T PRK15134 240 RAAT 243 (529)
T ss_pred CHHH
Confidence 8764
No 449
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-34 Score=329.11 Aligned_cols=203 Identities=27% Similarity=0.414 Sum_probs=167.8
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1445)
..++++|+++.|+.. . +++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~~~nl~~~~~~~-~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~ 81 (271)
T PRK13632 6 VMIKVENVSFSYPNS-E---NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEI 81 (271)
T ss_pred eEEEEEeEEEEcCCC-C---ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHH
Confidence 468899999998532 1 2359999999999999999999999999999999999999999998875
Q ss_pred --eEEEEcCCCC--CCCccHHHHHhcCCC---CChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 --SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 --~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
.++||+|+|. +++.|++|||.++.. ++.+ +..++++..++...+ .....+||||||||
T Consensus 82 ~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr 150 (271)
T PRK13632 82 RKKIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYL-----------DKEPQNLSGGQKQR 150 (271)
T ss_pred hcceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCCcccCCHHHHHH
Confidence 3899999984 556799999987532 3332 244556666665433 34456999999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccC-CceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHH
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHML-QKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 820 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~-~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~ 820 (1445)
++||||++.+|++++|||||++||+.+.+.+++. +.....+ ++|+|++||+++.+..||++++|++|++.+.|+.+++
T Consensus 151 l~laral~~~p~lllLDEP~~gLD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 229 (271)
T PRK13632 151 VAIASVLALNPEIIIFDESTSMLDPKGKREIKKI-MVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEI 229 (271)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988876 3321223 4899999999999888999999999999999998876
Q ss_pred Hh
Q 000522 821 AV 822 (1445)
Q Consensus 821 ~~ 822 (1445)
..
T Consensus 230 ~~ 231 (271)
T PRK13632 230 LN 231 (271)
T ss_pred hc
Confidence 43
No 450
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-34 Score=327.61 Aligned_cols=206 Identities=25% Similarity=0.349 Sum_probs=168.7
Q ss_pred CCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC----
Q 000522 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG---- 672 (1445)
Q Consensus 602 ~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~---- 672 (1445)
.+..++++|+++.|.. ..+|+|+||+|++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 10 ~~~~l~i~nl~~~~~~------~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~ 83 (269)
T PRK14259 10 KNIIISLQNVTISYGT------FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLY 83 (269)
T ss_pred CCceEEEEeEEEEECC------EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcc
Confidence 3457899999999853 235999999999999999999999999999999999987 5899998765
Q ss_pred -----------eEEEEcCCCCCCCccHHHHHhcCCCC---C---hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000522 673 -----------SIAYVPQVPWILSGTIRDNILFGKNY---D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1445)
Q Consensus 673 -----------~i~y~~Q~p~l~~~ti~~nI~~g~~~---~---~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LS 735 (1445)
.++|++|+|.++..|++||+.++... + +++..++++.+++...+. +.......+||
T Consensus 84 ~~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS 156 (269)
T PRK14259 84 DPRVDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLS 156 (269)
T ss_pred cccCCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCC
Confidence 38999999999988999999976432 1 123344555555432221 23456678999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeC------
Q 000522 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDK------ 808 (1445)
Q Consensus 736 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~------ 808 (1445)
||||||++||||++.+|+++||||||++||+.+.+++.+. +.. +.+++|+|++||+++.+.. ||++++|++
T Consensus 157 ~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-l~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~ 234 (269)
T PRK14259 157 GGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEET-MHE-LKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGG 234 (269)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccc
Confidence 9999999999999999999999999999999999988876 333 3456899999999998865 999999996
Q ss_pred -----CEEEEecCHhHHHh
Q 000522 809 -----GQVKWIGSSADLAV 822 (1445)
Q Consensus 809 -----G~i~~~g~~~~~~~ 822 (1445)
|++++.|+.+++..
T Consensus 235 ~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 235 SGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred cccccceEEEeCCHHHHHh
Confidence 67899999888754
No 451
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=328.36 Aligned_cols=205 Identities=25% Similarity=0.306 Sum_probs=167.0
Q ss_pred CceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC-----
Q 000522 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG----- 672 (1445)
Q Consensus 603 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~----- 672 (1445)
+..++++|+++.|.. ..+|+|+||++++||+++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 19 ~~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~ 92 (268)
T PRK14248 19 EHILEVKDLSIYYGE------KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILD 92 (268)
T ss_pred CceEEEEEEEEEeCC------ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccc
Confidence 346899999999852 235999999999999999999999999999999999864 6899998764
Q ss_pred ----------eEEEEcCCCCCCCccHHHHHhcCCCCC--------hhhHHHHHHHhcchHHHhhccCCCcccccCCCCcc
Q 000522 673 ----------SIAYVPQVPWILSGTIRDNILFGKNYD--------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 734 (1445)
Q Consensus 673 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~~~--------~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~L 734 (1445)
.++|++|+|.++++|++||+.++.... +++..++++.+++..++. ...+....+|
T Consensus 93 ~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~L 165 (268)
T PRK14248 93 SNINVVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSL 165 (268)
T ss_pred ccccHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccC
Confidence 489999999999999999998753211 122334444444432221 2345677899
Q ss_pred chHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEE
Q 000522 735 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKW 813 (1445)
Q Consensus 735 SGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~ 813 (1445)
|||||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++
T Consensus 166 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~ 243 (268)
T PRK14248 166 SGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEEL-ITE-LKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVE 243 (268)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHH-HHH-HhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999888775 333 3446899999999998765 99999999999999
Q ss_pred ecCHhHHHh
Q 000522 814 IGSSADLAV 822 (1445)
Q Consensus 814 ~g~~~~~~~ 822 (1445)
.|+++++..
T Consensus 244 ~~~~~~~~~ 252 (268)
T PRK14248 244 YDQTEQIFT 252 (268)
T ss_pred eCCHHHHHh
Confidence 999888753
No 452
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-34 Score=332.27 Aligned_cols=207 Identities=29% Similarity=0.405 Sum_probs=165.0
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1445)
..++++|+++.|+.... ...++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~i~nl~~~~~~~~~-~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 5 KDIILDNVSYTYAKKTP-FEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred ceEEEEEEEEEeCCCCc-cccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 45889999999864210 112469999999999999999999999999999999999999999998754
Q ss_pred -------eEEEEcCCCC--CCCccHHHHHhcCCC---CChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000522 673 -------SIAYVPQVPW--ILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1445)
Q Consensus 673 -------~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSG 736 (1445)
.|+|++|+|. +++.|++|||.++.. .+.+ +..+.++.++|..+ ..+....+|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~----------~~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPED----------YVKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------HhcCChhhCCH
Confidence 3899999984 667899999988642 1211 22233444443211 12456679999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEEEEe
Q 000522 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1445)
Q Consensus 737 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1445)
|||||++||||++.+|+++||||||++||+.+.+.+++. +..... .++|+|++||+++.+.. ||++++|++|++++.
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~ 232 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINL-FERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISI 232 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999888775 332112 37899999999998765 999999999999999
Q ss_pred cCHhHHHh
Q 000522 815 GSSADLAV 822 (1445)
Q Consensus 815 g~~~~~~~ 822 (1445)
|+++++..
T Consensus 233 g~~~~~~~ 240 (289)
T PRK13645 233 GSPFEIFS 240 (289)
T ss_pred CCHHHHhc
Confidence 99888753
No 453
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=4.4e-34 Score=328.61 Aligned_cols=201 Identities=24% Similarity=0.344 Sum_probs=165.5
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1445)
..++++|+++.|.. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 79 (269)
T PRK11831 6 NLVDMRGVSFTRGN------RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRL 79 (269)
T ss_pred ceEEEeCeEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhH
Confidence 46899999999852 2359999999999999999999999999999999999999999998875
Q ss_pred -----eEEEEcCCCCCCCc-cHHHHHhcCC----CCCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000522 673 -----SIAYVPQVPWILSG-TIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1445)
Q Consensus 673 -----~i~y~~Q~p~l~~~-ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQ 738 (1445)
.++|++|++.+++. |++||+.++. ..+. ++..+.++.+++... ......+|||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq 148 (269)
T PRK11831 80 YTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGA-----------AKLMPSELSGGM 148 (269)
T ss_pred HHHhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhh-----------hhCChhhCCHHH
Confidence 38999999999876 9999998642 1222 123344555555322 233456899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEEEEecC
Q 000522 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGS 816 (1445)
Q Consensus 739 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~ 816 (1445)
|||++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 149 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~ 227 (269)
T PRK11831 149 ARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKL-ISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGS 227 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999998888775 332112 37899999999998876 99999999999999999
Q ss_pred HhHHHh
Q 000522 817 SADLAV 822 (1445)
Q Consensus 817 ~~~~~~ 822 (1445)
++++..
T Consensus 228 ~~~~~~ 233 (269)
T PRK11831 228 AQALQA 233 (269)
T ss_pred HHHHhc
Confidence 988754
No 454
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-34 Score=317.52 Aligned_cols=190 Identities=27% Similarity=0.374 Sum_probs=158.0
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------eE
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 674 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 674 (1445)
++++|+++.|.. . ..|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .+
T Consensus 1 i~~~~l~~~~~~----~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i 72 (211)
T cd03298 1 VRLDKIRFSYGE----Q----PMHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPV 72 (211)
T ss_pred CEEEeEEEEeCC----E----ecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccE
Confidence 357889998852 1 2399999999999999999999999999999999999999999976 38
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCCC-------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHH
Q 000522 675 AYVPQVPWILSG-TIRDNILFGKNY-------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 746 (1445)
Q Consensus 675 ~y~~Q~p~l~~~-ti~~nI~~g~~~-------~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lAR 746 (1445)
+|++|+|.++.+ |++||+.++... ++++..++++.+++...... ...+||||||||++|||
T Consensus 73 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ia~ 141 (211)
T cd03298 73 SMLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKR-----------LPGELSGGERQRVALAR 141 (211)
T ss_pred EEEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHHHHHH
Confidence 999999999875 999999875321 13355667777777644433 33589999999999999
Q ss_pred HHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhhh-CCEEEEEeCCEEEEec
Q 000522 747 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 747 aly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1445)
|++.+|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 142 al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 142 VLVRDKPVLLLDEPFAALDPALRAEMLDL-VLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999988876 33211 237899999999999876 9999999999997653
No 455
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3.7e-34 Score=337.02 Aligned_cols=203 Identities=26% Similarity=0.373 Sum_probs=168.1
Q ss_pred CceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------
Q 000522 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1445)
Q Consensus 603 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 672 (1445)
...++++|++..|.. ..+|+|+||+|++|++++++||||||||||+++|+|+++|++|+|.++|
T Consensus 39 ~~~i~i~nl~k~y~~------~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~ 112 (340)
T PRK13536 39 TVAIDLAGVSKSYGD------KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLA 112 (340)
T ss_pred ceeEEEEEEEEEECC------EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHH
Confidence 356999999999853 2359999999999999999999999999999999999999999999876
Q ss_pred --eEEEEcCCCCCC-CccHHHHHhc-CCC--CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000522 673 --SIAYVPQVPWIL-SGTIRDNILF-GKN--YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1445)
Q Consensus 673 --~i~y~~Q~p~l~-~~ti~~nI~~-g~~--~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv 742 (1445)
.+|||||++.++ +.|++||+.+ +.. .+. ++.+++++.++|... ...+..+||||||||+
T Consensus 113 ~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~-----------~~~~~~~LS~G~kqrv 181 (340)
T PRK13536 113 RARIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-----------ADARVSDLSGGMKRRL 181 (340)
T ss_pred hccEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchh-----------hCCChhhCCHHHHHHH
Confidence 499999999987 4599999975 321 121 233344555544321 1334568999999999
Q ss_pred HHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHH
Q 000522 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLA 821 (1445)
Q Consensus 743 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~ 821 (1445)
+||||+.++|+++||||||++||+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++.
T Consensus 182 ~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~-l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~ 260 (340)
T PRK13536 182 TLARALINDPQLLILDEPTTGLDPHARHLIWER-LRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALI 260 (340)
T ss_pred HHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999988886 33312357899999999999875 9999999999999999999986
Q ss_pred hc
Q 000522 822 VS 823 (1445)
Q Consensus 822 ~~ 823 (1445)
..
T Consensus 261 ~~ 262 (340)
T PRK13536 261 DE 262 (340)
T ss_pred hh
Confidence 54
No 456
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.5e-34 Score=359.16 Aligned_cols=208 Identities=18% Similarity=0.235 Sum_probs=176.2
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFA 1301 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~ 1301 (1445)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+...+|++++
T Consensus 3 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 3 SLQISQGTFRLSD--TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred eEEEEeEEEEcCC--eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 3899999999964 35999999999999999999999999999999999999999999999999887777777888899
Q ss_pred EEcCCCcc--c-------CccHHHhcCCCCCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1302 VVPQSPFL--F-------EGSLRDNLDPFHMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1302 ~VpQdp~l--F-------~gTIReNLdp~~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
++||++.+ + .-|+++|+.... ..++++.++++.. |++.........||||||||++|||||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~---------~l~~~~~~~~~~LSgG~~qrv~la~al 150 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDEV-KDPARCEQLAQQF---------GITALLDRRFKYLSTGETRKTLLCQAL 150 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccch-hHHHHHHHHHHHc---------CCHhhhhCCcccCCHHHHHHHHHHHHH
Confidence 99999753 2 348999886421 1223444455544 444434445567999999999999999
Q ss_pred ccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCC
Q 000522 1373 LKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1373 Lr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~ 1441 (1445)
+++|++|+|||||++||+++.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|++++.|++++
T Consensus 151 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 221 (490)
T PRK10938 151 MSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREE 221 (490)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999998763 47899999999999876 79999999999999988654
No 457
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-34 Score=326.40 Aligned_cols=202 Identities=26% Similarity=0.343 Sum_probs=166.9
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC-------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------- 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~------- 672 (1445)
.++++|+++.|.. . ++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~---~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~ 77 (251)
T PRK14251 4 IISAKDVHLSYGN---Y---EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSK 77 (251)
T ss_pred eEEEEeeEEEECC---e---eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEccccc
Confidence 4789999999852 2 35999999999999999999999999999999999986 4799998765
Q ss_pred --------eEEEEcCCCCCCCccHHHHHhcCCCC----Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000522 673 --------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1445)
Q Consensus 673 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSG 736 (1445)
.++|++|+|.+++.|++||+.++... ++ ++..++++.+++..+.. ...+..+.+|||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 150 (251)
T PRK14251 78 MDLVELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETK-------DNLDRNAQAFSG 150 (251)
T ss_pred chHHHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchH-------HHhccChhhCCH
Confidence 38999999999999999999875321 11 23445566655532211 123456789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEec
Q 000522 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 737 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1445)
|||||++||||++++|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 151 Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~ 228 (251)
T PRK14251 151 GQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEET-LME-LKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAG 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHH-HHH-HHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999998888776 433 3446899999999999765 9999999999999999
Q ss_pred CHhHHH
Q 000522 816 SSADLA 821 (1445)
Q Consensus 816 ~~~~~~ 821 (1445)
+.+++.
T Consensus 229 ~~~~~~ 234 (251)
T PRK14251 229 PTEEMF 234 (251)
T ss_pred CHHHHH
Confidence 988874
No 458
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-34 Score=326.56 Aligned_cols=204 Identities=25% Similarity=0.349 Sum_probs=167.8
Q ss_pred CceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC-----
Q 000522 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG----- 672 (1445)
Q Consensus 603 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~----- 672 (1445)
...++++|+++.|.. +++|+|+||+|++||+++|+|+||||||||+++|.|..+| ++|+|.++|
T Consensus 10 ~~~l~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~ 83 (258)
T PRK14268 10 QPQIKVENLNLWYGE------KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYE 83 (258)
T ss_pred ceeEEEeeeEEEeCC------eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEccc
Confidence 346899999998852 2359999999999999999999999999999999999875 799998754
Q ss_pred ----------eEEEEcCCCCCCCccHHHHHhcCCC---CChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000522 673 ----------SIAYVPQVPWILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1445)
Q Consensus 673 ----------~i~y~~Q~p~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LS 735 (1445)
.++|++|++.+++.|++||+.++.. .+.+ +.+++++.+++..++. ........+||
T Consensus 84 ~~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS 156 (258)
T PRK14268 84 PDVDVVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS-------DRLKSPALSLS 156 (258)
T ss_pred ccchHHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCChhhCC
Confidence 3899999999998999999987531 2222 2344555555532221 22345677999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEe
Q 000522 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1445)
Q Consensus 736 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1445)
||||||++||||++.+|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 157 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 234 (258)
T PRK14268 157 GGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDL-IMN-LKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEF 234 (258)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHH-HHH-HhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999988775 333 3457899999999998865 999999999999999
Q ss_pred cCHhHHH
Q 000522 815 GSSADLA 821 (1445)
Q Consensus 815 g~~~~~~ 821 (1445)
|+++++.
T Consensus 235 ~~~~~~~ 241 (258)
T PRK14268 235 GQTRQIF 241 (258)
T ss_pred CCHHHHh
Confidence 9988874
No 459
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.5e-34 Score=340.44 Aligned_cols=188 Identities=26% Similarity=0.393 Sum_probs=158.6
Q ss_pred cceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC---------------------eEEEEcCCCCC
Q 000522 625 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------------------SIAYVPQVPWI 683 (1445)
Q Consensus 625 ~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------------------~i~y~~Q~p~l 683 (1445)
.+|+|+||++++||+++|+|+||||||||+++|.|+++|++|+|.++| .++||+|++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 359999999999999999999999999999999999999999999875 39999999999
Q ss_pred CC-ccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEE
Q 000522 684 LS-GTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIY 755 (1445)
Q Consensus 684 ~~-~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~il 755 (1445)
++ .|++|||.++.. .++ ++..++++..+|.... .....+|||||||||+||||++.+|+|+
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~-----------~~~~~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWA-----------DKKPGELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 87 699999998742 222 3445566666665433 2344589999999999999999999999
Q ss_pred EEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhh-hCCEEEEEeCCEEEEecCHhHHHhc
Q 000522 756 MLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADLAVS 823 (1445)
Q Consensus 756 llDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~~~~~~~~ 823 (1445)
|||||||+||+.+.+.+.+.+..-....++|+|++||+++.+. .||+|++|++|++++.|+++++...
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 9999999999999998888643211123789999999999865 5999999999999999999998643
No 460
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=3.1e-34 Score=321.51 Aligned_cols=201 Identities=22% Similarity=0.319 Sum_probs=162.2
Q ss_pred EEEEEEEEEeCCC-----CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC--C--eeCCCCCh
Q 000522 1223 IEFQNVTMRYKPS-----LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVD--G--LNIINTPV 1293 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~-----~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~ID--G--~di~~i~~ 1293 (1445)
|+++|++++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+| | +++...+.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 7899999999631 2469999999999999999999999999999999999999999999998 4 37766665
Q ss_pred Hh---h-hcceEEEcCCCcccCc-cHHHhcCCC---CCCChHHHHHHHHHccHHHHHHhCCCchh-hhcCCCCCChhHHH
Q 000522 1294 RD---L-RGRFAVVPQSPFLFEG-SLRDNLDPF---HMNDDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQ 1364 (1445)
Q Consensus 1294 ~~---l-R~~i~~VpQdp~lF~g-TIReNLdp~---~~~sd~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~~LSgGQrQ 1364 (1445)
.. + +++++|+||+|.+|+. |+++|+... .....++..+ ...+.++.+|++.. ....+.+||+||||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~LS~G~~q 156 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARA-----RARELLARLNIPERLWHLPPATFSGGEQQ 156 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCchhhhhCCcccCCHHHHH
Confidence 43 3 4679999999988875 999998642 1111111111 12333444466543 24456789999999
Q ss_pred HHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHh-hcCEEEEE
Q 000522 1365 LICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILIL 1428 (1445)
Q Consensus 1365 rl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl 1428 (1445)
|++||||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+. -||+|+.+
T Consensus 157 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 157 RVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 9999999999999999999999999999999999998764 4899999999999886 58999876
No 461
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-34 Score=324.76 Aligned_cols=203 Identities=23% Similarity=0.349 Sum_probs=166.6
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCC-----CeEEEEcC-------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLT-----HGSIHASG------- 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~-----~G~i~~~~------- 672 (1445)
.++++|+++.|.. +.+|+|+||+|++|++++|+||||||||||+++|+|+++|+ +|+|.++|
T Consensus 4 ~l~~~~l~~~~~~------~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~ 77 (251)
T PRK14249 4 KIKIRGVNFFYHK------HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPN 77 (251)
T ss_pred eEEEEEEEEEECC------eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccc
Confidence 5789999999852 23599999999999999999999999999999999999987 69998754
Q ss_pred --------eEEEEcCCCCCCCccHHHHHhcCCCC----Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000522 673 --------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1445)
Q Consensus 673 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSG 736 (1445)
.++|++|+|.+++.|++||+.++..+ .+ ++..++++..++...+. +..+..+.+|||
T Consensus 78 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~ 150 (251)
T PRK14249 78 LDVVNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSG 150 (251)
T ss_pred cChHHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCH
Confidence 39999999999989999999886421 11 12233334444432221 234667889999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEec
Q 000522 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 737 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1445)
|||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++.+.|
T Consensus 151 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~-~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~ 228 (251)
T PRK14249 151 GQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEEL-MQE-LKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYG 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeC
Confidence 999999999999999999999999999999999888775 433 3457899999999999876 8999999999999999
Q ss_pred CHhHHHh
Q 000522 816 SSADLAV 822 (1445)
Q Consensus 816 ~~~~~~~ 822 (1445)
+.+++..
T Consensus 229 ~~~~~~~ 235 (251)
T PRK14249 229 RTGEIFS 235 (251)
T ss_pred CHHHHHh
Confidence 9888743
No 462
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=330.84 Aligned_cols=206 Identities=25% Similarity=0.389 Sum_probs=166.4
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|+.... ...++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~~~~-~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 80 (280)
T PRK13649 2 GINLQNVSYTYQAGTP-FEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDI 80 (280)
T ss_pred eEEEEEEEEEcCCCCc-cccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCH
Confidence 3678999999864211 112469999999999999999999999999999999999999999998865
Q ss_pred -----eEEEEcCCC--CCCCccHHHHHhcCCC---CChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000522 673 -----SIAYVPQVP--WILSGTIRDNILFGKN---YDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1445)
Q Consensus 673 -----~i~y~~Q~p--~l~~~ti~~nI~~g~~---~~~~----~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQ 738 (1445)
.|+|++|+| .+++.|++|||.++.. .+.+ +.+++++..++..+ .......+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~ 150 (280)
T PRK13649 81 KQIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELSGGQ 150 (280)
T ss_pred HHHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHH
Confidence 289999998 5788899999987532 2222 23344455555321 1244567899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCH
Q 000522 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSS 817 (1445)
Q Consensus 739 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~ 817 (1445)
|||++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 151 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (280)
T PRK13649 151 MRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTL-FKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKP 229 (280)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999998888876 33212247899999999998865 999999999999999998
Q ss_pred hHHHh
Q 000522 818 ADLAV 822 (1445)
Q Consensus 818 ~~~~~ 822 (1445)
+++..
T Consensus 230 ~~~~~ 234 (280)
T PRK13649 230 KDIFQ 234 (280)
T ss_pred HHHhc
Confidence 88754
No 463
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=2.3e-33 Score=317.28 Aligned_cols=162 Identities=22% Similarity=0.297 Sum_probs=126.5
Q ss_pred EEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEEEcCCCc-ccCccHHHhcCCCCC-
Q 000522 1246 TIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPF-LFEGSLRDNLDPFHM- 1323 (1445)
Q Consensus 1246 ~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~-lF~gTIReNLdp~~~- 1323 (1445)
+|..||.+|++||+|-||||++++|.|.++|++|+ ..+ -+++|=||--. -|+|||++-|.--..
T Consensus 363 ~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~----------~~vSyKPQyI~~~~~gtV~~~l~~~~~~ 428 (591)
T COG1245 363 EIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EED----------LKVSYKPQYISPDYDGTVEDLLRSAIRS 428 (591)
T ss_pred eeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Ccc----------ceEeecceeecCCCCCcHHHHHHHhhhh
Confidence 45567999999999999999999999999999998 222 25888888442 389999987631111
Q ss_pred -CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEEEEeccccCCCHHHHHHHHHHHHH
Q 000522 1324 -NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISS 1402 (1445)
Q Consensus 1324 -~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~ 1402 (1445)
+.+.-.+ .+.++.+.|+..+...-.+|||||.||+++|-||.|++++.+||||+|.||.+-.-.+-++||+
T Consensus 429 ~~~~s~~~--------~ei~~pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakvIRR 500 (591)
T COG1245 429 AFGSSYFK--------TEIVKPLNLEDLLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKVIRR 500 (591)
T ss_pred hcccchhH--------HhhcCccchHHHHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHHHHH
Confidence 1111111 1223334556556666667999999999999999999999999999999999998888888887
Q ss_pred h--CCCcEEEEeccChhHHhh-cCEEEEEe
Q 000522 1403 E--CKGMTVITIAHRISTVLN-MDEILILD 1429 (1445)
Q Consensus 1403 ~--~~~~TvI~IaHrl~ti~~-~DrI~Vl~ 1429 (1445)
. -.++|.++|-|++-.+.. +||++|++
T Consensus 501 ~~e~~~kta~vVdHDi~~~dyvsDr~ivF~ 530 (591)
T COG1245 501 FIENNEKTALVVDHDIYMIDYVSDRLIVFE 530 (591)
T ss_pred HHhhcCceEEEEecceehhhhhhceEEEEe
Confidence 5 368999999999988765 69999986
No 464
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.1e-34 Score=323.10 Aligned_cols=199 Identities=26% Similarity=0.356 Sum_probs=164.2
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|+++.|+. +.+|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~------~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 75 (240)
T PRK09493 2 IEFKNVSKHFGP------TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLI 75 (240)
T ss_pred EEEEeEEEEECC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHH
Confidence 568899998852 2359999999999999999999999999999999999999999998875
Q ss_pred --eEEEEcCCCCCCC-ccHHHHHhcCC----CCCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 --SIAYVPQVPWILS-GTIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 --~i~y~~Q~p~l~~-~ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
.++|++|++.++. .|++||+.++. ..+. ++..++++..+++.. .......||||||||
T Consensus 76 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qr 144 (240)
T PRK09493 76 RQEAGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAER-----------AHHYPSELSGGQQQR 144 (240)
T ss_pred hhceEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHH-----------HhcChhhcCHHHHHH
Confidence 3899999998876 59999998753 1222 233445555544322 234557899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHH
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~ 820 (1445)
++||||++.+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 145 v~la~al~~~p~llllDEP~~~LD~~~~~~l~~~-l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 223 (240)
T PRK09493 145 VAIARALAVKPKLMLFDEPTSALDPELRHEVLKV-MQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVL 223 (240)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHH
Confidence 9999999999999999999999999999888875 33212347899999999999875 999999999999999998876
Q ss_pred Hh
Q 000522 821 AV 822 (1445)
Q Consensus 821 ~~ 822 (1445)
..
T Consensus 224 ~~ 225 (240)
T PRK09493 224 IK 225 (240)
T ss_pred hc
Confidence 43
No 465
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-34 Score=325.42 Aligned_cols=203 Identities=28% Similarity=0.355 Sum_probs=166.1
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCc--cC---CCeEEEEcC-------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEM--ML---THGSIHASG------- 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~--~~---~~G~i~~~~------- 672 (1445)
.++++|+++.|.. +.+|+|+||++++||+++|+||||||||||+++|.|.. +| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~------~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~ 78 (252)
T PRK14239 5 ILQVSDLSVYYNK------KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPR 78 (252)
T ss_pred eEEEEeeEEEECC------eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcc
Confidence 5789999999852 23599999999999999999999999999999999985 36 589998765
Q ss_pred --------eEEEEcCCCCCCCccHHHHHhcCCC---C-Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000522 673 --------SIAYVPQVPWILSGTIRDNILFGKN---Y-DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1445)
Q Consensus 673 --------~i~y~~Q~p~l~~~ti~~nI~~g~~---~-~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSG 736 (1445)
.++|++|+|.+++.|++||+.++.. . ++ ++..++++.+++...+. +..+....+|||
T Consensus 79 ~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~ 151 (252)
T PRK14239 79 TDTVDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSG 151 (252)
T ss_pred cchHhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCH
Confidence 3899999999999999999986521 1 11 22333455555543222 234567789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEec
Q 000522 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 737 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1445)
|||||++||||+..+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 152 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 229 (252)
T PRK14239 152 GQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEET-LLG-LKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYN 229 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHH-HHH-HhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999988875 333 3446899999999998765 9999999999999999
Q ss_pred CHhHHHh
Q 000522 816 SSADLAV 822 (1445)
Q Consensus 816 ~~~~~~~ 822 (1445)
+.+++..
T Consensus 230 ~~~~~~~ 236 (252)
T PRK14239 230 DTKQMFM 236 (252)
T ss_pred CHHHHHh
Confidence 9888753
No 466
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=3.7e-34 Score=387.44 Aligned_cols=216 Identities=24% Similarity=0.321 Sum_probs=185.8
Q ss_pred ccEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcce
Q 000522 1221 GLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRF 1300 (1445)
Q Consensus 1221 g~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i 1300 (1445)
..|+++|++++|+++..++|+|+||++++||.+||+|+||||||||+++|.|+++|++|+|.++|.|+.. +....|+++
T Consensus 927 ~~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~I 1005 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSL 1005 (2272)
T ss_pred ceEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcE
Confidence 3699999999996444579999999999999999999999999999999999999999999999999975 567789999
Q ss_pred EEEcCCCcccCc-cHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCC
Q 000522 1301 AVVPQSPFLFEG-SLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSS 1376 (1445)
Q Consensus 1301 ~~VpQdp~lF~g-TIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~ 1376 (1445)
+++||++.+|+. |++|||.++.. .+.++.++ ...+.++.+||+...+....+||||||||++|||||+.+|
T Consensus 1006 G~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~-----~v~~lL~~vgL~~~~~~~~~~LSGGqKQRLsLArALi~~P 1080 (2272)
T TIGR01257 1006 GMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL-----EMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDA 1080 (2272)
T ss_pred EEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHcCCchhhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 999999999975 99999975421 12222211 1223444446666666677789999999999999999999
Q ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhCCCcEEEEeccChhHHhh-cCEEEEEeCCeEeeecCCCCC
Q 000522 1377 KVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLN-MDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1377 ~ILlLDEaTS~lD~~te~~Iq~~I~~~~~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
+||+||||||+||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|+|.++
T Consensus 1081 kVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~L 1147 (2272)
T TIGR01257 1081 KVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFL 1147 (2272)
T ss_pred CEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 999999999999999999999999988779999999999999875 899999999999999998654
No 467
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-34 Score=325.08 Aligned_cols=203 Identities=24% Similarity=0.310 Sum_probs=169.3
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC-------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------- 672 (1445)
.++++|+++.|.. . .+|+|+||++++||+++|+|+||||||||+++|+|..+| ++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~---~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~ 77 (251)
T PRK14270 4 KMESKNLNLWYGE---K---QALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKD 77 (251)
T ss_pred EEEEEEeEEEECC---e---eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEeccccc
Confidence 4788999998852 2 359999999999999999999999999999999999875 799998865
Q ss_pred --------eEEEEcCCCCCCCccHHHHHhcCCCC----Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000522 673 --------SIAYVPQVPWILSGTIRDNILFGKNY----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1445)
Q Consensus 673 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSG 736 (1445)
.++|++|++.+++.|++||+.|+... +. ++..++++.+++..++.. ..+.....|||
T Consensus 78 ~~~~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~ 150 (251)
T PRK14270 78 VDVVELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSG 150 (251)
T ss_pred ccHHHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCH
Confidence 38999999999999999999876321 11 234566777766543332 23456779999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEec
Q 000522 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 737 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1445)
|||||++||||++.+|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 151 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-L~~-~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (251)
T PRK14270 151 GQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDL-MVE-LKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFN 228 (251)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeC
Confidence 999999999999999999999999999999999988775 433 3446899999999998776 9999999999999999
Q ss_pred CHhHHHh
Q 000522 816 SSADLAV 822 (1445)
Q Consensus 816 ~~~~~~~ 822 (1445)
+.+++..
T Consensus 229 ~~~~~~~ 235 (251)
T PRK14270 229 KTEKIFL 235 (251)
T ss_pred CHHHHhc
Confidence 9888743
No 468
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-34 Score=317.74 Aligned_cols=191 Identities=23% Similarity=0.390 Sum_probs=157.7
Q ss_pred EEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC---------eEEEE
Q 000522 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------SIAYV 677 (1445)
Q Consensus 607 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------~i~y~ 677 (1445)
+++|+++.|.. +++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++|+
T Consensus 2 ~~~~l~~~~~~------~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~ 75 (210)
T cd03269 2 EVENVTKRFGR------VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYL 75 (210)
T ss_pred EEEEEEEEECC------EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEe
Confidence 57888888852 2359999999999999999999999999999999999999999999986 49999
Q ss_pred cCCCCCCCc-cHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHc
Q 000522 678 PQVPWILSG-TIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVY 749 (1445)
Q Consensus 678 ~Q~p~l~~~-ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly 749 (1445)
+|++.++.+ |++||+.++.. .+ +++..+.++..++.... .....+||||||||++||||++
T Consensus 76 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la~al~ 144 (210)
T cd03269 76 PEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYA-----------NKRVEELSKGNQQKVQFIAAVI 144 (210)
T ss_pred ccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHH-----------hCcHhhCCHHHHHHHHHHHHHh
Confidence 999988875 99999986421 11 22344555555554332 3456789999999999999999
Q ss_pred cCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEec
Q 000522 750 HGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 750 ~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1445)
.+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 ~~p~~lllDEP~~~LD~~~~~~~~~~-l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 145 HDPELLILDEPFSGLDPVNVELLKDV-IRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHH-HHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999988876 33212347899999999998865 9999999999998654
No 469
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4.2e-34 Score=319.85 Aligned_cols=193 Identities=26% Similarity=0.381 Sum_probs=157.4
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|+++.|+... ...++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~--~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~ 79 (221)
T TIGR02211 2 LKCENLGKRYQEGK--LDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAK 79 (221)
T ss_pred EEEEeeeEEccCCC--cceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHH
Confidence 57889999985321 112469999999999999999999999999999999999999999998864
Q ss_pred ----eEEEEcCCCCCCC-ccHHHHHhcCC---CCC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHH
Q 000522 673 ----SIAYVPQVPWILS-GTIRDNILFGK---NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 740 (1445)
Q Consensus 673 ----~i~y~~Q~p~l~~-~ti~~nI~~g~---~~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkq 740 (1445)
.++|++|+|.+++ .|++||+.++. .++ .++..+.++.++++... .....+|||||||
T Consensus 80 ~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~q 148 (221)
T TIGR02211 80 LRNKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRI-----------NHRPSELSGGERQ 148 (221)
T ss_pred HHHhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHH
Confidence 3899999998885 59999998742 122 22344555655554322 3445689999999
Q ss_pred HHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhhhCCEEEEEeCCEEE
Q 000522 741 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMDKGQVK 812 (1445)
Q Consensus 741 Rv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~~d~i~~l~~G~i~ 812 (1445)
|++||||++.+|+++||||||++||+.+.+.+.+. +.... ..++|+|++||+++.+..+|++++|++|+++
T Consensus 149 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 149 RVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDL-MLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999988876 33211 2378999999999998889999999999975
No 470
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-34 Score=326.30 Aligned_cols=202 Identities=26% Similarity=0.350 Sum_probs=167.2
Q ss_pred CCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC---------
Q 000522 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--------- 672 (1445)
Q Consensus 602 ~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--------- 672 (1445)
++..++++|+++.|.. . .+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 8 ~~~~l~i~~l~~~~~~---~---~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~ 81 (265)
T PRK10575 8 SDTTFALRNVSFRVPG---R---TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSK 81 (265)
T ss_pred CCceEEEeeEEEEECC---E---EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHH
Confidence 3456899999999852 2 359999999999999999999999999999999999999999999876
Q ss_pred ----eEEEEcCCCCCCCc-cHHHHHhcCCC--------C---ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000522 673 ----SIAYVPQVPWILSG-TIRDNILFGKN--------Y---DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1445)
Q Consensus 673 ----~i~y~~Q~p~l~~~-ti~~nI~~g~~--------~---~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSG 736 (1445)
.++|++|++-++.+ |++||+.++.. . ++++..+.++.+++...+. ....+|||
T Consensus 82 ~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSg 150 (265)
T PRK10575 82 AFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAH-----------RLVDSLSG 150 (265)
T ss_pred HHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhc-----------CCcccCCH
Confidence 38999999876654 99999987531 1 1234556667776654333 33458999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEEEEe
Q 000522 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1445)
Q Consensus 737 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1445)
|||||++||||+..+|+++||||||++||+.+.+.+.+. +..... .+.|+|++||+++.+.. ||+|++|++|++++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~-l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~ 229 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLAL-VHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQ 229 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEe
Confidence 999999999999999999999999999999998888775 332112 37899999999999865 999999999999999
Q ss_pred cCHhHHH
Q 000522 815 GSSADLA 821 (1445)
Q Consensus 815 g~~~~~~ 821 (1445)
|+.+++.
T Consensus 230 ~~~~~~~ 236 (265)
T PRK10575 230 GTPAELM 236 (265)
T ss_pred cCHHHhc
Confidence 9988764
No 471
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=5.8e-34 Score=325.83 Aligned_cols=202 Identities=25% Similarity=0.313 Sum_probs=166.4
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1445)
+.++++|+++.|.. . .+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 ~~l~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~ 77 (257)
T PRK10619 4 NKLNVIDLHKRYGE---H---EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDG 77 (257)
T ss_pred ccEEEeeeEEEECC---E---EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEccccccccc
Confidence 45889999999852 2 359999999999999999999999999999999999999999998765
Q ss_pred ---------------eEEEEcCCCCCCCc-cHHHHHhcCC----CCCh----hhHHHHHHHhcchHHHhhccCCCccccc
Q 000522 673 ---------------SIAYVPQVPWILSG-TIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIG 728 (1445)
Q Consensus 673 ---------------~i~y~~Q~p~l~~~-ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg 728 (1445)
.++|++|+|.++.. |++||+.++. ..++ ++..+.++..++...+ .+
T Consensus 78 ~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~ 147 (257)
T PRK10619 78 QLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QG 147 (257)
T ss_pred ccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hh
Confidence 38999999999875 9999997642 1221 2334445554443221 13
Q ss_pred CCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEe
Q 000522 729 EKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMD 807 (1445)
Q Consensus 729 ~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~ 807 (1445)
.....||||||||++||||++++|++++|||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||+|++|+
T Consensus 148 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~ 226 (257)
T PRK10619 148 KYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRI-MQQLAEEGKTMVVVTHEMGFARHVSSHVIFLH 226 (257)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEE
Confidence 45679999999999999999999999999999999999999988875 33312347899999999999886 99999999
Q ss_pred CCEEEEecCHhHHHh
Q 000522 808 KGQVKWIGSSADLAV 822 (1445)
Q Consensus 808 ~G~i~~~g~~~~~~~ 822 (1445)
+|++++.|+++++..
T Consensus 227 ~G~i~~~~~~~~~~~ 241 (257)
T PRK10619 227 QGKIEEEGAPEQLFG 241 (257)
T ss_pred CCEEEEeCCHHHhhh
Confidence 999999999888743
No 472
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=2e-33 Score=374.56 Aligned_cols=208 Identities=24% Similarity=0.269 Sum_probs=150.6
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHH---------HHhcCCCCCC----c----EEEEC
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILN---------ALFRLTPICG----G----QILVD 1284 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~---------~L~rl~~~~~----G----~I~ID 1284 (1445)
.++++|++. ..|+|+|++|++||.+||+|+||||||||++ .|.|...+.. + -|.||
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 578888762 3799999999999999999999999999999 4445332211 1 24566
Q ss_pred CeeCCCCCh----H------hhhc---------ceE-----EEcCC------------------C---------------
Q 000522 1285 GLNIINTPV----R------DLRG---------RFA-----VVPQS------------------P--------------- 1307 (1445)
Q Consensus 1285 G~di~~i~~----~------~lR~---------~i~-----~VpQd------------------p--------------- 1307 (1445)
-.++..-+. . ++|+ +.+ +..|. |
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 655543222 1 4441 111 12221 1
Q ss_pred -----cccCc-cHHHhcCCCCC-----C-ChHHHHHHHHHccHHHHHHhCCCchh-hhcCCCCCChhHHHHHHHHHHhc-
Q 000522 1308 -----FLFEG-SLRDNLDPFHM-----N-DDLKIWSVLEKCHVKEEVEAVGLETF-VKESGISFSVGQRQLICLARALL- 1373 (1445)
Q Consensus 1308 -----~lF~g-TIReNLdp~~~-----~-sd~ei~~aL~~~~l~~~i~~lgLdt~-v~e~G~~LSgGQrQrl~LARALL- 1373 (1445)
..+.+ ||.|||++... . +.+++.+.+ +.++.+||+.. .+....+||||||||++|||||+
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l------~~L~~vGL~~l~l~q~~~tLSGGE~QRV~LAraL~~ 826 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKI------HALCSLGLDYLPLGRPLSSLSGGEIQRLKLAYELLA 826 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHH------HHHHHcCCcchhhcCccccCCHHHHHHHHHHHHHhh
Confidence 13333 77777765421 0 112232222 13344588765 68888899999999999999998
Q ss_pred --cCCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhhcCEEEEEe------CCeEeeecCCCCC
Q 000522 1374 --KSSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILILD------HGHLPHCGCAAAP 1442 (1445)
Q Consensus 1374 --r~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl~------~G~vvE~G~p~~~ 1442 (1445)
++|+++||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++|+ +|++++.|+|++.
T Consensus 827 ~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtpeel 904 (1809)
T PRK00635 827 PSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSPEEL 904 (1809)
T ss_pred cCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCHHHH
Confidence 5999999999999999999999999998764 5889999999999998899999996 7999999998653
No 473
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.3e-34 Score=323.42 Aligned_cols=202 Identities=26% Similarity=0.353 Sum_probs=166.6
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC-------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------- 672 (1445)
.++++|+++.|.. . ++++|+||++++||+++|+|+||||||||+++|+|..++ ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~ 76 (250)
T PRK14240 3 KISVKDLDLFYGD---F---QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSD 76 (250)
T ss_pred eEEEEEEEEEECC---c---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 4789999999853 2 359999999999999999999999999999999998763 689998865
Q ss_pred --------eEEEEcCCCCCCCccHHHHHhcCCCC----C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000522 673 --------SIAYVPQVPWILSGTIRDNILFGKNY----D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1445)
Q Consensus 673 --------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSG 736 (1445)
.++|++|+|.+++.|++||+.++... + +++..++++.+++..++. ...+..+.+|||
T Consensus 77 ~~~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~ 149 (250)
T PRK14240 77 IDVNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSG 149 (250)
T ss_pred cchHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCH
Confidence 38999999999889999999876321 1 123344555555543332 224566789999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEec
Q 000522 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 737 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1445)
|||||++||||++.+|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 150 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (250)
T PRK14240 150 GQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEEL-IQE-LKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFG 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999888765 433 3457899999999998765 9999999999999999
Q ss_pred CHhHHH
Q 000522 816 SSADLA 821 (1445)
Q Consensus 816 ~~~~~~ 821 (1445)
+.+++.
T Consensus 228 ~~~~~~ 233 (250)
T PRK14240 228 DTVDLF 233 (250)
T ss_pred CHHHHH
Confidence 988864
No 474
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.6e-34 Score=322.70 Aligned_cols=197 Identities=21% Similarity=0.313 Sum_probs=164.5
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|+++.|+. .++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 3 i~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (242)
T TIGR03411 3 LYLEGLSVSFDG------FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIAR 76 (242)
T ss_pred EEEEeeEEEcCC------eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHh
Confidence 678999998852 2359999999999999999999999999999999999999999999875
Q ss_pred -eEEEEcCCCCCCCc-cHHHHHhcCCCCC---------------hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccc
Q 000522 673 -SIAYVPQVPWILSG-TIRDNILFGKNYD---------------PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLS 735 (1445)
Q Consensus 673 -~i~y~~Q~p~l~~~-ti~~nI~~g~~~~---------------~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LS 735 (1445)
.++|++|++.++++ |++||+.++...+ +++.++.++..+++ ........+||
T Consensus 77 ~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS 145 (242)
T TIGR03411 77 AGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLA-----------DEADRLAGLLS 145 (242)
T ss_pred cCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCc-----------hhhcCChhhCC
Confidence 38999999999986 9999998753211 12233344443332 22345667999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEe
Q 000522 736 GGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWI 814 (1445)
Q Consensus 736 GGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~ 814 (1445)
||||||++||||++.+|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 146 ~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~-l~~-~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~ 223 (242)
T TIGR03411 146 HGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAEL-LKS-LAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAE 223 (242)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHH-HHH-HhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEee
Confidence 9999999999999999999999999999999999988875 332 3446899999999999875 999999999999999
Q ss_pred cCHhHHH
Q 000522 815 GSSADLA 821 (1445)
Q Consensus 815 g~~~~~~ 821 (1445)
|+++++.
T Consensus 224 ~~~~~~~ 230 (242)
T TIGR03411 224 GSLDQVQ 230 (242)
T ss_pred CCHHHHh
Confidence 9988764
No 475
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=4.3e-33 Score=358.73 Aligned_cols=214 Identities=24% Similarity=0.318 Sum_probs=146.5
Q ss_pred cEEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHh------cCCC----C-----------CCcE
Q 000522 1222 LIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALF------RLTP----I-----------CGGQ 1280 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~------rl~~----~-----------~~G~ 1280 (1445)
.++++|++. ..|+|+||+|++||.+||+|+||||||||+.-.+ ++.+ | -.--
T Consensus 612 ~l~l~~~~~-------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (924)
T TIGR00630 612 FLTLKGARE-------NNLKNITVSIPLGLFTCITGVSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKV 684 (924)
T ss_pred eEEEEeCcc-------CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccccccCCCce
Confidence 488888862 2599999999999999999999999999998333 1111 1 1123
Q ss_pred EEECCeeCCCCC----------hHhhhcceEEEcC------CCcccCc--------------cHHHhcCCC---------
Q 000522 1281 ILVDGLNIINTP----------VRDLRGRFAVVPQ------SPFLFEG--------------SLRDNLDPF--------- 1321 (1445)
Q Consensus 1281 I~IDG~di~~i~----------~~~lR~~i~~VpQ------dp~lF~g--------------TIReNLdp~--------- 1321 (1445)
|.||-.+|..-+ .+.+|.-++=.|+ .+-.|+- .+.-++.+.
T Consensus 685 v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 764 (924)
T TIGR00630 685 IHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEV 764 (924)
T ss_pred EEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCCCcccCCCC
Confidence 556655554322 1234555544443 1222321 111111100
Q ss_pred ---CCCChH-----------------HHHHHHHHc----cH---HHHHHhCCCch-hhhcCCCCCChhHHHHHHHHHHhc
Q 000522 1322 ---HMNDDL-----------------KIWSVLEKC----HV---KEEVEAVGLET-FVKESGISFSVGQRQLICLARALL 1373 (1445)
Q Consensus 1322 ---~~~sd~-----------------ei~~aL~~~----~l---~~~i~~lgLdt-~v~e~G~~LSgGQrQrl~LARALL 1373 (1445)
..+.++ .+.++++-. .+ .+.++.+||+. .+++....|||||+||++|||+|.
T Consensus 765 C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~ 844 (924)
T TIGR00630 765 CKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELS 844 (924)
T ss_pred cCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHHh
Confidence 011111 111222111 11 12233347875 468888899999999999999999
Q ss_pred c---CCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhhcCEEEEE------eCCeEeeecCCCCC
Q 000522 1374 K---SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLNMDEILIL------DHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1374 r---~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~~DrI~Vl------~~G~vvE~G~p~~~ 1442 (1445)
+ +|+++||||||++||+.+.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|++.
T Consensus 845 ~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 845 KRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIKTADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 7 489999999999999999999999998764 589999999999999999999999 79999999999764
No 476
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=2.9e-34 Score=315.29 Aligned_cols=192 Identities=19% Similarity=0.253 Sum_probs=160.4
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
++++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (198)
T TIGR01189 1 LAARNLACSRGE--RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQR-DEPHRNILY 77 (198)
T ss_pred CEEEEEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccch-HHhhhheEE
Confidence 478999999964 46999999999999999999999999999999999999999999999999998765 456789999
Q ss_pred EcCCCcccC-ccHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCE
Q 000522 1303 VPQSPFLFE-GSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKV 1378 (1445)
Q Consensus 1303 VpQdp~lF~-gTIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~I 1378 (1445)
+||++.+|+ .|+++|+..... ..++++.++++..++.+. ......+||+|||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~---------~~~~~~~LS~G~~qrv~la~al~~~p~l 148 (198)
T TIGR01189 78 LGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGLTGF---------EDLPAAQLSAGQQRRLALARLWLSRAPL 148 (198)
T ss_pred eccCcccccCCcHHHHHHHHHHHcCCcHHHHHHHHHHcCCHHH---------hcCChhhcCHHHHHHHHHHHHHhcCCCE
Confidence 999998886 699999864321 112345556666555443 3334457999999999999999999999
Q ss_pred EEEeccccCCCHHHHHHHHHHHHHh-CCCcEEEEeccChhHHhhcCEEEE
Q 000522 1379 LCLDECTANVDAQTASILQNAISSE-CKGMTVITIAHRISTVLNMDEILI 1427 (1445)
Q Consensus 1379 LlLDEaTS~lD~~te~~Iq~~I~~~-~~~~TvI~IaHrl~ti~~~DrI~V 1427 (1445)
++|||||++||..+.+.+.+.|++. .++.|+|++||+...+. ||+++.
T Consensus 149 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~-~~~~~~ 197 (198)
T TIGR01189 149 WILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGLV-EARELR 197 (198)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccccc-ceEEee
Confidence 9999999999999999999999875 35789999999985443 476654
No 477
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.5e-34 Score=319.25 Aligned_cols=199 Identities=23% Similarity=0.339 Sum_probs=162.5
Q ss_pred CceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC----------
Q 000522 603 DMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG---------- 672 (1445)
Q Consensus 603 ~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~---------- 672 (1445)
+..++++|+++.|.. .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 5 ~~~i~~~~l~~~~~~------~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~ 78 (225)
T PRK10247 5 SPLLQLQNVGYLAGD------AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEI 78 (225)
T ss_pred CceEEEeccEEeeCC------ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHH
Confidence 346899999999852 2359999999999999999999999999999999999999999999876
Q ss_pred ---eEEEEcCCCCCCCccHHHHHhcCCCC-----ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHH
Q 000522 673 ---SIAYVPQVPWILSGTIRDNILFGKNY-----DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 744 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~~ti~~nI~~g~~~-----~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~l 744 (1445)
.++|++|+|++++.|++||+.++..+ ++++..+.++.+++.. +.......+||||||||++|
T Consensus 79 ~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrv~l 148 (225)
T PRK10247 79 YRQQVSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPD----------TILTKNIAELSGGEKQRISL 148 (225)
T ss_pred HHhccEEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCCh----------HHhcCCcccCCHHHHHHHHH
Confidence 38999999999989999999864221 2233445555555532 22345677999999999999
Q ss_pred HHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhhhCCEEEEEe-CCEEEEecCHh
Q 000522 745 ARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISAADMVVVMD-KGQVKWIGSSA 818 (1445)
Q Consensus 745 ARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~~d~i~~l~-~G~i~~~g~~~ 818 (1445)
|||++++|+++||||||++||+.+.+.+.+. +.... .+++|+|++||+.+.++.||++++|+ ++..+++|+|+
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 149 IRNLQFMPKVLLLDEITSALDESNKHNVNEI-IHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999998877765 33211 23789999999999998899999995 56666677664
No 478
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.1e-34 Score=327.18 Aligned_cols=201 Identities=28% Similarity=0.406 Sum_probs=167.5
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|+.. ..+|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~~-----~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~ 77 (277)
T PRK13652 3 LIETRDLCYSYSGS-----KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVR 77 (277)
T ss_pred eEEEEEEEEEeCCC-----CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHH
Confidence 36789999998532 2359999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCCC--CCCccHHHHHhcCC---CCChh----hHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000522 673 -SIAYVPQVPW--ILSGTIRDNILFGK---NYDPQ----SYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1445)
Q Consensus 673 -~i~y~~Q~p~--l~~~ti~~nI~~g~---~~~~~----~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv 742 (1445)
.++||+|+|. +++.|++||+.++. .++++ ++++.++.+++...+. .....||||||||+
T Consensus 78 ~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Gq~qrl 146 (277)
T PRK13652 78 KFVGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRD-----------RVPHHLSGGEKKRV 146 (277)
T ss_pred hheEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhc-----------CCcccCCHHHHHHH
Confidence 3899999983 67789999998753 23332 3556667666654333 34468999999999
Q ss_pred HHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhh-hCCEEEEEeCCEEEEecCHhHH
Q 000522 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGSSADL 820 (1445)
Q Consensus 743 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~~~~~ 820 (1445)
+||||++.+|+++||||||++||+.+.+.+.+. +..... ++.|+|++||+++.+. .||+|++|++|++++.|+++++
T Consensus 147 ~laraL~~~p~llilDEPt~gLD~~~~~~l~~~-l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~ 225 (277)
T PRK13652 147 AIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDF-LNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEI 225 (277)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHH
Confidence 999999999999999999999999998888775 332112 3789999999999985 5999999999999999999988
Q ss_pred Hh
Q 000522 821 AV 822 (1445)
Q Consensus 821 ~~ 822 (1445)
..
T Consensus 226 ~~ 227 (277)
T PRK13652 226 FL 227 (277)
T ss_pred hc
Confidence 54
No 479
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-34 Score=327.88 Aligned_cols=204 Identities=26% Similarity=0.347 Sum_probs=169.0
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|+.... .++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 4 ~l~~~~l~~~~~~~~~---~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~ 80 (277)
T PRK13642 4 ILEVENLVFKYEKESD---VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLR 80 (277)
T ss_pred eEEEEEEEEEcCCCCc---CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHh
Confidence 4789999999964211 2369999999999999999999999999999999999999999999876
Q ss_pred -eEEEEcCCCC--CCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHH
Q 000522 673 -SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARL 742 (1445)
Q Consensus 673 -~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv 742 (1445)
.++|++|+|. +++.|+.|||.++.. ... ++++++++.+++.... ......||||||||+
T Consensus 81 ~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv 149 (277)
T PRK13642 81 RKIGMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFK-----------TREPARLSGGQKQRV 149 (277)
T ss_pred cceEEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHh-----------hCCcccCCHHHHHHH
Confidence 3899999984 667899999987532 222 2345566666664322 234568999999999
Q ss_pred HHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHHH
Q 000522 743 ALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADLA 821 (1445)
Q Consensus 743 ~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~~ 821 (1445)
+||||++.+|+++||||||++||+.+.+.+.+. +..... .|.|+|++||+++.+..||+|++|++|++++.|+++++.
T Consensus 150 ~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~-l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 228 (277)
T PRK13642 150 AVAGIIALRPEIIILDESTSMLDPTGRQEIMRV-IHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELF 228 (277)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999988875 332122 278999999999999889999999999999999998876
Q ss_pred hc
Q 000522 822 VS 823 (1445)
Q Consensus 822 ~~ 823 (1445)
..
T Consensus 229 ~~ 230 (277)
T PRK13642 229 AT 230 (277)
T ss_pred cC
Confidence 43
No 480
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=8.8e-34 Score=333.03 Aligned_cols=210 Identities=21% Similarity=0.302 Sum_probs=169.7
Q ss_pred CceEEEEccEEecccCCc-------cccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC---
Q 000522 603 DMAVIMQDATCSWYCNNE-------EEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--- 672 (1445)
Q Consensus 603 ~~~i~~~~~~f~w~~~~~-------~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--- 672 (1445)
+..++++|++..|..... .....+++|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i 85 (331)
T PRK15079 6 KVLLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDL 85 (331)
T ss_pred CceEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEEC
Confidence 356889999998863211 0113479999999999999999999999999999999999999999998865
Q ss_pred -------------eEEEEcCCC--CCC-CccHHHHHhcCC-----CCCh----hhHHHHHHHhcchHHHhhccCCCcccc
Q 000522 673 -------------SIAYVPQVP--WIL-SGTIRDNILFGK-----NYDP----QSYSETLKACTLDVDISLMVGGDMAYI 727 (1445)
Q Consensus 673 -------------~i~y~~Q~p--~l~-~~ti~~nI~~g~-----~~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~v 727 (1445)
.|+||+|+| .++ ..||.|||.++. ..++ ++..+.++..++..+. .
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~----------~ 155 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNL----------I 155 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHH----------h
Confidence 499999999 355 469999997531 2332 2334556666663321 2
Q ss_pred cCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhhh-CCEEEE
Q 000522 728 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAISA-ADMVVV 805 (1445)
Q Consensus 728 g~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~~-~d~i~~ 805 (1445)
......|||||||||+||||++.+|+++|+||||++||+.+...+++. +.... ..+.|+|+|||+++.+.. ||+|++
T Consensus 156 ~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~l-L~~l~~~~~~til~iTHdl~~~~~~~dri~v 234 (331)
T PRK15079 156 NRYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNL-LQQLQREMGLSLIFIAHDLAVVKHISDRVLV 234 (331)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEE
Confidence 455679999999999999999999999999999999999999999886 33211 237899999999999876 999999
Q ss_pred EeCCEEEEecCHhHHHhc
Q 000522 806 MDKGQVKWIGSSADLAVS 823 (1445)
Q Consensus 806 l~~G~i~~~g~~~~~~~~ 823 (1445)
|++|+|++.|+.+++...
T Consensus 235 l~~G~ive~g~~~~i~~~ 252 (331)
T PRK15079 235 MYLGHAVELGTYDEVYHN 252 (331)
T ss_pred EECCEEEEEcCHHHHHcC
Confidence 999999999999988654
No 481
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=326.08 Aligned_cols=205 Identities=26% Similarity=0.357 Sum_probs=169.4
Q ss_pred CCceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC----
Q 000522 602 KDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG---- 672 (1445)
Q Consensus 602 ~~~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~---- 672 (1445)
....++++|+++.|.. . .+|+|+||++++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 22 ~~~~l~~~nl~~~~~~---~---~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~ 95 (272)
T PRK14236 22 EQTALEVRNLNLFYGD---K---QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIY 95 (272)
T ss_pred CCcEEEEEEEEEEECC---e---eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECc
Confidence 3456899999999852 2 35999999999999999999999999999999999987 4899998754
Q ss_pred -----------eEEEEcCCCCCCCccHHHHHhcCCCC----C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCc
Q 000522 673 -----------SIAYVPQVPWILSGTIRDNILFGKNY----D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVN 733 (1445)
Q Consensus 673 -----------~i~y~~Q~p~l~~~ti~~nI~~g~~~----~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~ 733 (1445)
.++|++|++.+++.|++||+.++..+ . +++..++++..++..++. +..+..+.+
T Consensus 96 ~~~~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~ 168 (272)
T PRK14236 96 DKKVDVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFG 168 (272)
T ss_pred ccccCHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCccc
Confidence 48999999999989999999875321 1 123445555555544332 234667889
Q ss_pred cchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEE
Q 000522 734 LSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVK 812 (1445)
Q Consensus 734 LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~ 812 (1445)
|||||||||+||||++.+|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 169 LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~-L~~-~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~ 246 (272)
T PRK14236 169 LSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEEL-ITE-LKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLV 246 (272)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHH-HHH-HHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999998888775 433 3346899999999998765 9999999999999
Q ss_pred EecCHhHHH
Q 000522 813 WIGSSADLA 821 (1445)
Q Consensus 813 ~~g~~~~~~ 821 (1445)
+.|+++++.
T Consensus 247 ~~g~~~~~~ 255 (272)
T PRK14236 247 EYGDTDTLF 255 (272)
T ss_pred ecCCHHHHh
Confidence 999988874
No 482
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=6.4e-34 Score=320.27 Aligned_cols=197 Identities=28% Similarity=0.421 Sum_probs=161.8
Q ss_pred EEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--------------
Q 000522 607 IMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-------------- 672 (1445)
Q Consensus 607 ~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-------------- 672 (1445)
+++|+++.|+. .++|+|+||++++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~~~~l~~~~~~------~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 75 (230)
T TIGR03410 2 EVSNLNVYYGQ------SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARA 75 (230)
T ss_pred EEEeEEEEeCC------eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHh
Confidence 57889998852 2359999999999999999999999999999999999999999999875
Q ss_pred eEEEEcCCCCCCCc-cHHHHHhcCCCC-C---hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHH
Q 000522 673 SIAYVPQVPWILSG-TIRDNILFGKNY-D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARA 747 (1445)
Q Consensus 673 ~i~y~~Q~p~l~~~-ti~~nI~~g~~~-~---~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARa 747 (1445)
.++|++|++.+++. |++||+.++... . .+.+.++++..+. ..........+||||||||++||||
T Consensus 76 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~----------l~~~~~~~~~~LS~G~~qrv~la~a 145 (230)
T TIGR03410 76 GIAYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFPV----------LKEMLGRRGGDLSGGQQQQLAIARA 145 (230)
T ss_pred CeEEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHHh----------HHHHhhCChhhCCHHHHHHHHHHHH
Confidence 38999999998876 999999875321 1 1223334443321 1122345667899999999999999
Q ss_pred HccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHH
Q 000522 748 VYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADL 820 (1445)
Q Consensus 748 ly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~ 820 (1445)
++.+|++++|||||++||+.+.+.+.+. +..... +++|+|++||+++.+.. ||+|+++++|++++.|+.+++
T Consensus 146 l~~~p~illlDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 146 LVTRPKLLLLDEPTEGIQPSIIKDIGRV-IRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHH-HHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 9999999999999999999999988876 332122 37899999999999885 999999999999999998776
No 483
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=323.90 Aligned_cols=204 Identities=25% Similarity=0.332 Sum_probs=169.3
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCcc-----CCCeEEEEcC------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMM-----LTHGSIHASG------ 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~-----~~~G~i~~~~------ 672 (1445)
..++++|+++.|.. . ++|+|+||++++||+++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 9 ~~l~i~~v~~~~~~---~---~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~ 82 (264)
T PRK14243 9 TVLRTENLNVYYGS---F---LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAP 82 (264)
T ss_pred eEEEEeeeEEEECC---E---EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEcccc
Confidence 36899999999852 2 35999999999999999999999999999999999876 4799998765
Q ss_pred ---------eEEEEcCCCCCCCccHHHHHhcCCCC---C---hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchH
Q 000522 673 ---------SIAYVPQVPWILSGTIRDNILFGKNY---D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGG 737 (1445)
Q Consensus 673 ---------~i~y~~Q~p~l~~~ti~~nI~~g~~~---~---~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGG 737 (1445)
.++|++|+|.+++.|++|||.++... . +++..++++.+++..++.. ..+..+.+||||
T Consensus 83 ~~~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgG 155 (264)
T PRK14243 83 DVDPVEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGG 155 (264)
T ss_pred ccChHHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHH
Confidence 38999999999988999999876432 1 2334455666666544431 235677899999
Q ss_pred HHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEe---------
Q 000522 738 QRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMD--------- 807 (1445)
Q Consensus 738 QkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~--------- 807 (1445)
||||++||||++.+|+++||||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+.. ||+|++|+
T Consensus 156 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~-~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~ 233 (264)
T PRK14243 156 QQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEEL-MHE-LKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGR 233 (264)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEecCHHHHHHhCCEEEEEeccccccccc
Confidence 99999999999999999999999999999999988775 333 3446899999999998775 99999998
Q ss_pred CCEEEEecCHhHHHh
Q 000522 808 KGQVKWIGSSADLAV 822 (1445)
Q Consensus 808 ~G~i~~~g~~~~~~~ 822 (1445)
+|++++.|+.+|+..
T Consensus 234 ~g~i~~~~~~~~~~~ 248 (264)
T PRK14243 234 YGYLVEFDRTEKIFN 248 (264)
T ss_pred CceEEEeCCHHHHHh
Confidence 799999999988854
No 484
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1e-33 Score=318.21 Aligned_cols=197 Identities=25% Similarity=0.298 Sum_probs=161.4
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1445)
..++++|+++.|..... ..++++|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~~~~--~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~ 82 (228)
T PRK10584 5 NIVEVHHLKKSVGQGEH--ELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEAR 82 (228)
T ss_pred ceEEEeeeEEEccCCCc--ceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHH
Confidence 35889999999864211 11359999999999999999999999999999999999999999998764
Q ss_pred ------eEEEEcCCCCCCCc-cHHHHHhcCC---CCC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHH
Q 000522 673 ------SIAYVPQVPWILSG-TIRDNILFGK---NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQ 738 (1445)
Q Consensus 673 ------~i~y~~Q~p~l~~~-ti~~nI~~g~---~~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQ 738 (1445)
.++|++|+|.++.. |++||+.++. ..+ +++.++.++.+++...+. ....+|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~Ge 151 (228)
T PRK10584 83 AKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLD-----------HLPAQLSGGE 151 (228)
T ss_pred HHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhh-----------CChhhCCHHH
Confidence 38999999998875 9999998642 111 234566677777654433 2345899999
Q ss_pred HHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhhCCEEEEEeCCEEEEe
Q 000522 739 RARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWI 814 (1445)
Q Consensus 739 kqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~ 814 (1445)
|||++||||++.+|+++||||||++||+...+.+.+. +..... .++|+|++||+.+.+..||++++|++|++++.
T Consensus 152 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 152 QQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADL-LFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999998888876 332112 37899999999999888999999999998753
No 485
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-34 Score=340.70 Aligned_cols=187 Identities=25% Similarity=0.388 Sum_probs=157.9
Q ss_pred ceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------------eEEEEcCCCCCCC-cc
Q 000522 626 VLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------------SIAYVPQVPWILS-GT 687 (1445)
Q Consensus 626 ~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------------~i~y~~Q~p~l~~-~t 687 (1445)
+|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.++| .++||+|++.++. .|
T Consensus 43 ~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~T 122 (400)
T PRK10070 43 GVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMT 122 (400)
T ss_pred EEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCC
Confidence 59999999999999999999999999999999999999999999865 4899999999886 49
Q ss_pred HHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCC
Q 000522 688 IRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDV 760 (1445)
Q Consensus 688 i~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~ 760 (1445)
++|||.++.. ++ .++..++++.++|..... ....+|||||||||+||||++.+|+++|||||
T Consensus 123 v~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~-----------~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEP 191 (400)
T PRK10070 123 VLDNTAFGMELAGINAEERREKALDALRQVGLENYAH-----------SYPDELSGGMRQRVGLARALAINPDILLMDEA 191 (400)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhh-----------cCcccCCHHHHHHHHHHHHHhcCCCEEEEECC
Confidence 9999997632 22 234456667777654333 34458999999999999999999999999999
Q ss_pred CcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHHhc
Q 000522 761 LSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVS 823 (1445)
Q Consensus 761 ~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~~~ 823 (1445)
|++||+.+.+.+.+.+..-....++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 192 ts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 192 FSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999988876322111247899999999998765 999999999999999999988653
No 486
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=3.3e-34 Score=364.41 Aligned_cols=197 Identities=26% Similarity=0.342 Sum_probs=164.9
Q ss_pred CccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC--CcEEEECCeeCCCCChHhhhcceEEEcCCCcccCc-c
Q 000522 1237 PAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPIC--GGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEG-S 1313 (1445)
Q Consensus 1237 ~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~--~G~I~IDG~di~~i~~~~lR~~i~~VpQdp~lF~g-T 1313 (1445)
+.+|+|+|+++++||++||+||||||||||+++|.|+.+|. +|+|.+||.++. ...+++++||||++.+|+. |
T Consensus 81 ~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~~----~~~~~~i~yv~Q~~~l~~~lT 156 (659)
T PLN03211 81 RTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKPT----KQILKRTGFVTQDDILYPHLT 156 (659)
T ss_pred CeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEECc----hhhccceEEECcccccCCcCC
Confidence 46999999999999999999999999999999999999885 899999999874 2456789999999999975 9
Q ss_pred HHHhcCCCC------CCChHHHHHHHHHccHHHHHHhCCC----chhhhc-CCCCCChhHHHHHHHHHHhccCCCEEEEe
Q 000522 1314 LRDNLDPFH------MNDDLKIWSVLEKCHVKEEVEAVGL----ETFVKE-SGISFSVGQRQLICLARALLKSSKVLCLD 1382 (1445)
Q Consensus 1314 IReNLdp~~------~~sd~ei~~aL~~~~l~~~i~~lgL----dt~v~e-~G~~LSgGQrQrl~LARALLr~~~ILlLD 1382 (1445)
+||||.+.. ..++++..+. ..+.++.+|| ||.+|+ ....||||||||++|||||+++|+||+||
T Consensus 157 V~E~l~~~a~~~~~~~~~~~~~~~~-----v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLD 231 (659)
T PLN03211 157 VRETLVFCSLLRLPKSLTKQEKILV-----AESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILD 231 (659)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHH-----HHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEe
Confidence 999996421 1233332211 2234444444 666764 35679999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhH-H-hhcCEEEEEeCCeEeeecCCCCC
Q 000522 1383 ECTANVDAQTASILQNAISSEC-KGMTVITIAHRIST-V-LNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1383 EaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~t-i-~~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
|||++||..+...+.+.|++.. +++|||+++|+++. + ..||+|++|++|++++.|++++.
T Consensus 232 EPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~ 294 (659)
T PLN03211 232 EPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDA 294 (659)
T ss_pred CCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHH
Confidence 9999999999999999998764 58999999999984 4 55899999999999999998654
No 487
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=5.5e-34 Score=318.76 Aligned_cols=197 Identities=25% Similarity=0.292 Sum_probs=156.4
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
+.++|++.+|+. +++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++... +....
T Consensus 23 l~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~-----~~~~~- 94 (224)
T cd03220 23 LGILGRKGEVGE--FWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYPPDSGTVTVRGRVSSLL-----GLGGG- 94 (224)
T ss_pred hhhhhhhhhcCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEchhh-----ccccc-
Confidence 677888888864 4699999999999999999999999999999999999999999999999986421 11111
Q ss_pred EcCCCcccCccHHHhcCCCCC---CChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHhccCCCEE
Q 000522 1303 VPQSPFLFEGSLRDNLDPFHM---NDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARALLKSSKVL 1379 (1445)
Q Consensus 1303 VpQdp~lF~gTIReNLdp~~~---~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARALLr~~~IL 1379 (1445)
+..+.|+++|+..... .+.++..+ ...+..+.+|++.........||+|||||++||||++++|++|
T Consensus 95 -----~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 164 (224)
T cd03220 95 -----FNPELTGRENIYLNGRLLGLSRKEIDE-----KIDEIIEFSELGDFIDLPVKTYSSGMKARLAFAIATALEPDIL 164 (224)
T ss_pred -----CCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 2235699999864311 12222111 1122233335555555555689999999999999999999999
Q ss_pred EEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHhh-cCEEEEEeCCeEeeec
Q 000522 1380 CLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVLN-MDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1380 lLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~~-~DrI~Vl~~G~vvE~G 1437 (1445)
||||||++||+++.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 165 llDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 224 (224)
T cd03220 165 LIDEVLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224 (224)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999998764 46899999999999875 8999999999999876
No 488
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.5e-34 Score=333.66 Aligned_cols=187 Identities=24% Similarity=0.342 Sum_probs=159.1
Q ss_pred cceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------eEEEEcCCCCCCCc-cHHHH
Q 000522 625 VVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------SIAYVPQVPWILSG-TIRDN 691 (1445)
Q Consensus 625 ~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------~i~y~~Q~p~l~~~-ti~~n 691 (1445)
++|+|+||++++||+++|+||||||||||+++|+|.++|++|+|.++| .+||++|++.++.. |++||
T Consensus 7 ~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~ 86 (302)
T TIGR01188 7 KAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTGREN 86 (302)
T ss_pred eEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcHHHH
Confidence 359999999999999999999999999999999999999999999976 38999999998876 99999
Q ss_pred HhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCc
Q 000522 692 ILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAV 764 (1445)
Q Consensus 692 I~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~l 764 (1445)
+.+... .+ .++.+++++.++|.... .....+||||||||++||||++++|++++|||||++|
T Consensus 87 l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gL 155 (302)
T TIGR01188 87 LEMMGRLYGLPKDEAEERAEELLELFELGEAA-----------DRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGL 155 (302)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-----------CCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 986421 11 23456677777765432 2345689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHHhc
Q 000522 765 DAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAVS 823 (1445)
Q Consensus 765 D~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~~~ 823 (1445)
|+.+.+.+.+. +.....+|+|+|++||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 156 D~~~~~~l~~~-l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 156 DPRTRRAIWDY-IRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CHHHHHHHHHH-HHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 99999888876 33312347899999999999875 999999999999999999998654
No 489
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-34 Score=325.84 Aligned_cols=203 Identities=25% Similarity=0.382 Sum_probs=167.0
Q ss_pred ceEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------
Q 000522 604 MAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG----------- 672 (1445)
Q Consensus 604 ~~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~----------- 672 (1445)
..++++|+++.|.... .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 6 ~~l~i~~l~~~~~~~~----~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~ 81 (269)
T PRK13648 6 SIIVFKNVSFQYQSDA----SFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKL 81 (269)
T ss_pred ceEEEEEEEEEcCCCC----CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHH
Confidence 3589999999986321 2359999999999999999999999999999999999999999999976
Q ss_pred --eEEEEcCCCC--CCCccHHHHHhcCCC---CCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 --SIAYVPQVPW--ILSGTIRDNILFGKN---YDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 --~i~y~~Q~p~--l~~~ti~~nI~~g~~---~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
.++|++|+|+ +++.|+++|+.++.. ... ++.+++++..++.... .....+||||||||
T Consensus 82 ~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr 150 (269)
T PRK13648 82 RKHIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERA-----------DYEPNALSGGQKQR 150 (269)
T ss_pred HhheeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------hCCcccCCHHHHHH
Confidence 3899999996 445699999988632 122 2334445555554322 34567899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhhCCEEEEEeCCEEEEecCHhHH
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISAADMVVVMDKGQVKWIGSSADL 820 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~~d~i~~l~~G~i~~~g~~~~~ 820 (1445)
++||||++.+|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+..||+|++|++|++++.|+++++
T Consensus 151 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 229 (269)
T PRK13648 151 VAIAGVLALNPSVIILDEATSMLDPDARQNLLDL-VRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEI 229 (269)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999988875 333122 37899999999999888999999999999999999887
Q ss_pred Hh
Q 000522 821 AV 822 (1445)
Q Consensus 821 ~~ 822 (1445)
..
T Consensus 230 ~~ 231 (269)
T PRK13648 230 FD 231 (269)
T ss_pred hc
Confidence 54
No 490
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-34 Score=322.81 Aligned_cols=203 Identities=26% Similarity=0.348 Sum_probs=165.6
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccC-----CCeEEEEcC-------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMML-----THGSIHASG------- 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~-----~~G~i~~~~------- 672 (1445)
.++++|+++.|.. . ++++|+||++++||+++|+|+||||||||+++|.|+++| ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~---~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~ 76 (250)
T PRK14247 3 KIEIRDLKVSFGQ---V---EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMD 76 (250)
T ss_pred eEEEEeeEEEECC---e---eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCC
Confidence 4788999998852 2 359999999999999999999999999999999999974 799998875
Q ss_pred ------eEEEEcCCCCCC-CccHHHHHhcCCCC-----Ch----hhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000522 673 ------SIAYVPQVPWIL-SGTIRDNILFGKNY-----DP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1445)
Q Consensus 673 ------~i~y~~Q~p~l~-~~ti~~nI~~g~~~-----~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSG 736 (1445)
.|||++|+|.++ +.|++||+.++... +. ++..+.++.+++...+. ........+|||
T Consensus 77 ~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 149 (250)
T PRK14247 77 VIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK-------DRLDAPAGKLSG 149 (250)
T ss_pred HHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCCcccCCH
Confidence 489999999755 56999999875321 11 23345556666543221 123455678999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhh-hCCEEEEEeCCEEEEec
Q 000522 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 737 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g 815 (1445)
|||||++||||+..+|++++|||||++||+.+.+.+.+. +.. +.+++|+|++||+++.+. .||++++|++|++.+.|
T Consensus 150 G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~-l~~-~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 227 (250)
T PRK14247 150 GQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESL-FLE-LKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWG 227 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHH-HHH-HhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEEC
Confidence 999999999999999999999999999999999988876 333 345789999999999886 49999999999999999
Q ss_pred CHhHHHh
Q 000522 816 SSADLAV 822 (1445)
Q Consensus 816 ~~~~~~~ 822 (1445)
+++++..
T Consensus 228 ~~~~~~~ 234 (250)
T PRK14247 228 PTREVFT 234 (250)
T ss_pred CHHHHHc
Confidence 9888743
No 491
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-34 Score=294.77 Aligned_cols=209 Identities=22% Similarity=0.306 Sum_probs=178.8
Q ss_pred EEEEEEEEEeCCCCCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChHhhhcceEE
Q 000522 1223 IEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAV 1302 (1445)
Q Consensus 1223 I~f~nVs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~~lR~~i~~ 1302 (1445)
|+.+|++++-. .+.+|+|+||+++|||.+||+||||||||||+++|.|.+.|++|++.++|+|+++.+..++-++-++
T Consensus 2 i~a~nls~~~~--Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~raV 79 (259)
T COG4559 2 IRAENLSYSLA--GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRAV 79 (259)
T ss_pred eeeeeeEEEee--cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhhh
Confidence 67889987764 4569999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCcc-cCccHHHhcCCCC----C---CChHH--HHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHHHh
Q 000522 1303 VPQSPFL-FEGSLRDNLDPFH----M---NDDLK--IWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLARAL 1372 (1445)
Q Consensus 1303 VpQdp~l-F~gTIReNLdp~~----~---~sd~e--i~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LARAL 1372 (1445)
.||+..+ |+=|++|-+.++. . ..+++ ..+++.++++..+- +..-..|||||+||+.|||.|
T Consensus 80 lpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la---------~R~y~~LSGGEqQRVqlARvL 150 (259)
T COG4559 80 LPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLA---------GRDYRTLSGGEQQRVQLARVL 150 (259)
T ss_pred cccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhh---------ccchhhcCchHHHHHHHHHHH
Confidence 9999876 8889999875432 1 12333 56678887765432 122235999999999999999
Q ss_pred cc------CCCEEEEeccccCCCHHHHHHHHHHHHHhC-CCcEEEEeccChhHHh-hcCEEEEEeCCeEeeecCCCCC
Q 000522 1373 LK------SSKVLCLDECTANVDAQTASILQNAISSEC-KGMTVITIAHRISTVL-NMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1373 Lr------~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~-~~~TvI~IaHrl~ti~-~~DrI~Vl~~G~vvE~G~p~~~ 1442 (1445)
.. ++++|+||||||+||..-...+.++.|+.. +++.|+.|-|+|+... .||||++|.+|||+..|+|++-
T Consensus 151 aQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~v 228 (259)
T COG4559 151 AQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQDV 228 (259)
T ss_pred HHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHHh
Confidence 85 346999999999999999999999998864 5899999999999665 5799999999999999999863
No 492
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.6e-34 Score=284.63 Aligned_cols=209 Identities=26% Similarity=0.334 Sum_probs=175.2
Q ss_pred cEEEEEEEEEeCCC--CCccceeeeEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCeeCCCCChH---hh
Q 000522 1222 LIEFQNVTMRYKPS--LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVR---DL 1296 (1445)
Q Consensus 1222 ~I~f~nVs~~Y~~~--~~~vL~~isl~I~~GekvgIvGrTGSGKSTLl~~L~rl~~~~~G~I~IDG~di~~i~~~---~l 1296 (1445)
.|+.++++..-+.. .-.+|+||+|.|++||.+||||+||||||||+..|.|+-+|++|+|.+.|.++.+++-+ .+
T Consensus 6 ii~~~~l~ktvg~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~ssGeV~l~G~~L~~ldEd~rA~~ 85 (228)
T COG4181 6 IIEVHHLSKTVGQGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPSSGEVRLLGQPLHKLDEDARAAL 85 (228)
T ss_pred eeehhhhhhhhcCCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCCCceEEEcCcchhhcCHHHHHHh
Confidence 57888887776543 33689999999999999999999999999999999999999999999999999988854 45
Q ss_pred h-cceEEEcCCCcccCc-cHHHhcC-CC---CCCChHHHHHHHHHccHHHHHHhCCCchhhhcCCCCCChhHHHHHHHHH
Q 000522 1297 R-GRFAVVPQSPFLFEG-SLRDNLD-PF---HMNDDLKIWSVLEKCHVKEEVEAVGLETFVKESGISFSVGQRQLICLAR 1370 (1445)
Q Consensus 1297 R-~~i~~VpQdp~lF~g-TIReNLd-p~---~~~sd~ei~~aL~~~~l~~~i~~lgLdt~v~e~G~~LSgGQrQrl~LAR 1370 (1445)
| +++++|.|.-.|.+. |--||.. |. ++.+.+.- ....+.++..||...+..-..+|||||+||++|||
T Consensus 86 R~~~vGfVFQSF~Lip~ltAlENV~lPleL~ge~~~~~~------~~A~~lL~~vGLg~Rl~HyP~qLSGGEQQRVAiAR 159 (228)
T COG4181 86 RARHVGFVFQSFHLIPNLTALENVALPLELRGESSADSR------AGAKALLEAVGLGKRLTHYPAQLSGGEQQRVALAR 159 (228)
T ss_pred hccceeEEEEeeeccccchhhhhccchhhhcCCccccHH------HHHHHHHHHhCcccccccCccccCchHHHHHHHHH
Confidence 5 579999999988764 8999974 32 22121111 11233444457777788778899999999999999
Q ss_pred HhccCCCEEEEeccccCCCHHHHHHHHHHHHHhC--CCcEEEEeccChhHHhhcCEEEEEeCCeEeee
Q 000522 1371 ALLKSSKVLCLDECTANVDAQTASILQNAISSEC--KGMTVITIAHRISTVLNMDEILILDHGHLPHC 1436 (1445)
Q Consensus 1371 ALLr~~~ILlLDEaTS~lD~~te~~Iq~~I~~~~--~~~TvI~IaHrl~ti~~~DrI~Vl~~G~vvE~ 1436 (1445)
|+.-+|+||+-||||-|||.+|-+.|-+.+-+.- .+.|.++|||+......|||++-|.+|+++|.
T Consensus 160 Afa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~LA~Rc~R~~r~~~G~l~~~ 227 (228)
T COG4181 160 AFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQLAARCDRQLRLRSGRLVED 227 (228)
T ss_pred HhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHHHHHhhhheeeeecceeccC
Confidence 9999999999999999999999999999886543 58899999999999999999999999999864
No 493
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=323.50 Aligned_cols=198 Identities=24% Similarity=0.403 Sum_probs=165.2
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|++++|.. . .+|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 3 l~~~~l~~~~~~---~---~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (255)
T PRK11231 3 LRTENLTVGYGT---K---RILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLAR 76 (255)
T ss_pred EEEEeEEEEECC---E---EEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhh
Confidence 678999999852 2 359999999999999999999999999999999999999999999876
Q ss_pred eEEEEcCCCCCCCc-cHHHHHhcCCC-----C------ChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHH
Q 000522 673 SIAYVPQVPWILSG-TIRDNILFGKN-----Y------DPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRA 740 (1445)
Q Consensus 673 ~i~y~~Q~p~l~~~-ti~~nI~~g~~-----~------~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkq 740 (1445)
.++|++|++.++.+ |++||+.++.. + +.++..++++.+++.... ......|||||||
T Consensus 77 ~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~q 145 (255)
T PRK11231 77 RLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLA-----------DRRLTDLSGGQRQ 145 (255)
T ss_pred heEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHH-----------cCCcccCCHHHHH
Confidence 39999999988876 99999987631 1 122345555655554322 3456789999999
Q ss_pred HHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhH
Q 000522 741 RLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSAD 819 (1445)
Q Consensus 741 Rv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~ 819 (1445)
|++||||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|+++..|++++
T Consensus 146 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~-l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 224 (255)
T PRK11231 146 RAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRL-MRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEE 224 (255)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHH
Confidence 99999999999999999999999999998888876 33212347899999999998765 99999999999999999887
Q ss_pred HH
Q 000522 820 LA 821 (1445)
Q Consensus 820 ~~ 821 (1445)
+.
T Consensus 225 ~~ 226 (255)
T PRK11231 225 VM 226 (255)
T ss_pred hc
Confidence 64
No 494
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=4.1e-34 Score=318.28 Aligned_cols=188 Identities=23% Similarity=0.400 Sum_probs=155.7
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|+++.|+.+ ..+|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~l~~~~~~~-----~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 76 (214)
T TIGR02673 2 IEFHNVSKAYPGG-----VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPL 76 (214)
T ss_pred EEEEeeeEEeCCC-----ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHH
Confidence 5788999988421 2359999999999999999999999999999999999999999998765
Q ss_pred ---eEEEEcCCCCCCC-ccHHHHHhcCCC---CC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHH
Q 000522 673 ---SIAYVPQVPWILS-GTIRDNILFGKN---YD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRAR 741 (1445)
Q Consensus 673 ---~i~y~~Q~p~l~~-~ti~~nI~~g~~---~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqR 741 (1445)
.++|++|+|.++. .|++||+.++.. ++ +++.++.++..++..... ....+||||||||
T Consensus 77 ~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qr 145 (214)
T TIGR02673 77 LRRRIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKAD-----------AFPEQLSGGEQQR 145 (214)
T ss_pred HHhheEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHH
Confidence 4899999999886 599999987521 22 234556666666654333 2335899999999
Q ss_pred HHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCE
Q 000522 742 LALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQ 810 (1445)
Q Consensus 742 v~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~ 810 (1445)
++||||++.+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|+
T Consensus 146 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 146 VAIARAIVNSPPLLLADEPTGNLDPDLSERILDL-LKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 9999999999999999999999999999988876 33212347899999999999876 99999999984
No 495
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-33 Score=316.69 Aligned_cols=197 Identities=27% Similarity=0.403 Sum_probs=164.5
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-----------eE
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG-----------SI 674 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~-----------~i 674 (1445)
++++|++++|.. . ..|+||++++|++++|+||||||||||+++|+|+++|++|+|.++| .+
T Consensus 2 l~~~~l~~~~~~-----~---~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i 73 (232)
T PRK10771 2 LKLTDITWLYHH-----L---PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPSRRPV 73 (232)
T ss_pred eEEEEEEEEECC-----c---cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChhhccE
Confidence 578999999852 1 2489999999999999999999999999999999999999999876 38
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCC--C--C---hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHH
Q 000522 675 AYVPQVPWILSG-TIRDNILFGKN--Y--D---PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALAR 746 (1445)
Q Consensus 675 ~y~~Q~p~l~~~-ti~~nI~~g~~--~--~---~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lAR 746 (1445)
+|++|+|.++.+ |++|||.++.. . . +++..++++..+++..+.. ....||||||||++|||
T Consensus 74 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lar 142 (232)
T PRK10771 74 SMLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLAR-----------LPGQLSGGQRQRVALAR 142 (232)
T ss_pred EEEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhC-----------CcccCCHHHHHHHHHHH
Confidence 999999998875 99999987531 1 1 2345566777777654443 33589999999999999
Q ss_pred HHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEEEeCCEEEEecCHhHHHh
Q 000522 747 AVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIGSSADLAV 822 (1445)
Q Consensus 747 aly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g~~~~~~~ 822 (1445)
|++++|+++||||||++||+.+.+.+.+. +..... +++|+|++||+++.+.. ||++++|++|++.+.|+++++..
T Consensus 143 al~~~p~lllLDEP~~gLD~~~~~~~~~~-l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~ 219 (232)
T PRK10771 143 CLVREQPILLLDEPFSALDPALRQEMLTL-VSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLS 219 (232)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999888775 332122 37899999999999875 99999999999999999888753
No 496
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=7.7e-34 Score=323.78 Aligned_cols=199 Identities=27% Similarity=0.347 Sum_probs=163.6
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|.. . .+|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~---~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 76 (250)
T PRK11264 3 AIEVKNLVKKFHG---Q---TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQ 76 (250)
T ss_pred cEEEeceEEEECC---e---eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccch
Confidence 3788999999852 2 359999999999999999999999999999999999999999997753
Q ss_pred ---------eEEEEcCCCCCCC-ccHHHHHhcCC----CCCh----hhHHHHHHHhcchHHHhhccCCCcccccCCCCcc
Q 000522 673 ---------SIAYVPQVPWILS-GTIRDNILFGK----NYDP----QSYSETLKACTLDVDISLMVGGDMAYIGEKGVNL 734 (1445)
Q Consensus 673 ---------~i~y~~Q~p~l~~-~ti~~nI~~g~----~~~~----~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~L 734 (1445)
.++|++|+|.+++ .|++||+.++. ..+. ++..+.++..++.. .......+|
T Consensus 77 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~L 145 (250)
T PRK11264 77 KGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAG-----------KETSYPRRL 145 (250)
T ss_pred hhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcc-----------hhhCChhhC
Confidence 4899999998886 59999997642 1221 23334444444432 224566799
Q ss_pred chHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEE
Q 000522 735 SGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKW 813 (1445)
Q Consensus 735 SGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~ 813 (1445)
|||||||++||||+..+|+++||||||++||+.+.+.+.+. +.....+++|+|++||+++.+.. ||++++|++|++++
T Consensus 146 S~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~ 224 (250)
T PRK11264 146 SGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNT-IRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVE 224 (250)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999888875 33212347899999999999875 99999999999999
Q ss_pred ecCHhHHH
Q 000522 814 IGSSADLA 821 (1445)
Q Consensus 814 ~g~~~~~~ 821 (1445)
.|+.+++.
T Consensus 225 ~~~~~~~~ 232 (250)
T PRK11264 225 QGPAKALF 232 (250)
T ss_pred eCCHHHHh
Confidence 99988864
No 497
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=9.8e-34 Score=301.41 Aligned_cols=161 Identities=25% Similarity=0.393 Sum_probs=144.1
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC--eEEEEcCCCCC
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG--SIAYVPQVPWI 683 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~--~i~y~~Q~p~l 683 (1445)
++++|+++.|+.. +++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.+++ .++|++|+|.+
T Consensus 1 i~~~~~~~~~~~~-----~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~~ 75 (166)
T cd03223 1 IELENLSLATPDG-----RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPYL 75 (166)
T ss_pred CEEEEEEEEcCCC-----CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCcc
Confidence 3578999988532 2359999999999999999999999999999999999999999999987 79999999999
Q ss_pred CCccHHHHHhcCCCCChhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcC
Q 000522 684 LSGTIRDNILFGKNYDPQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSA 763 (1445)
Q Consensus 684 ~~~ti~~nI~~g~~~~~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~ 763 (1445)
++.|++||+.++ ....||||||||++||||++++|++++|||||++
T Consensus 76 ~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~ 121 (166)
T cd03223 76 PLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSA 121 (166)
T ss_pred ccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccc
Confidence 989999999864 2368999999999999999999999999999999
Q ss_pred cCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhhCCEEEEEeCC
Q 000522 764 VDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVMDKG 809 (1445)
Q Consensus 764 lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~~d~i~~l~~G 809 (1445)
||+.+.+.+.+. +.. . ++|+|++||+.+....||++++|++|
T Consensus 122 LD~~~~~~l~~~-l~~-~--~~tiiivsh~~~~~~~~d~i~~l~~~ 163 (166)
T cd03223 122 LDEESEDRLYQL-LKE-L--GITVISVGHRPSLWKFHDRVLDLDGE 163 (166)
T ss_pred cCHHHHHHHHHH-HHH-h--CCEEEEEeCChhHHhhCCEEEEEcCC
Confidence 999999988876 332 2 58999999999988789999999874
No 498
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=320.75 Aligned_cols=198 Identities=25% Similarity=0.377 Sum_probs=162.6
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|.. +.+|+|+||++++||+++|+||||||||||+++|+|..+|++|+|.++|
T Consensus 2 ~l~~~~l~~~~~~------~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~ 75 (242)
T PRK11124 2 SIQLNGINCFYGA------HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDK 75 (242)
T ss_pred EEEEEeeEEEECC------eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchh
Confidence 3678999999853 2359999999999999999999999999999999999999999998864
Q ss_pred -------eEEEEcCCCCCCCc-cHHHHHhcCC----CCC----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccch
Q 000522 673 -------SIAYVPQVPWILSG-TIRDNILFGK----NYD----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSG 736 (1445)
Q Consensus 673 -------~i~y~~Q~p~l~~~-ti~~nI~~g~----~~~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSG 736 (1445)
.++|++|+|.++.+ |++|||.++. ... .++..+.++..+++. .......+|||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LS~ 144 (242)
T PRK11124 76 AIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKP-----------YADRFPLHLSG 144 (242)
T ss_pred hHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCH
Confidence 38999999998875 9999997421 111 123344444444433 23445569999
Q ss_pred HHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcccCCceEEEEccCchhhhh-CCEEEEEeCCEEEEec
Q 000522 737 GQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISA-ADMVVVMDKGQVKWIG 815 (1445)
Q Consensus 737 GQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~~~~t~ilvth~~~~l~~-~d~i~~l~~G~i~~~g 815 (1445)
|||||++||||++.+|++++|||||++||+.+.+.+.+. +.....+++|+|++||+.+.+.. ||++++|++|++++.|
T Consensus 145 G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~-l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~ 223 (242)
T PRK11124 145 GQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSI-IRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQG 223 (242)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHH-HHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999888875 33212347899999999999875 9999999999999999
Q ss_pred CHhHH
Q 000522 816 SSADL 820 (1445)
Q Consensus 816 ~~~~~ 820 (1445)
+++++
T Consensus 224 ~~~~~ 228 (242)
T PRK11124 224 DASCF 228 (242)
T ss_pred CHHHh
Confidence 88765
No 499
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=322.87 Aligned_cols=199 Identities=21% Similarity=0.295 Sum_probs=163.8
Q ss_pred eEEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC------------
Q 000522 605 AVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------ 672 (1445)
Q Consensus 605 ~i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------ 672 (1445)
.++++|+++.|+. .++|+|+||++++|++++|+|+||||||||+++|.|+++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~------~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 78 (255)
T PRK11300 5 LLSVSGLMMRFGG------LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIA 78 (255)
T ss_pred eEEEeeEEEEECC------EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHH
Confidence 5889999999852 2359999999999999999999999999999999999999999999876
Q ss_pred --eEEEEcCCCCCCCc-cHHHHHhcCCC-----------C-----Ch------hhHHHHHHHhcchHHHhhccCCCcccc
Q 000522 673 --SIAYVPQVPWILSG-TIRDNILFGKN-----------Y-----DP------QSYSETLKACTLDVDISLMVGGDMAYI 727 (1445)
Q Consensus 673 --~i~y~~Q~p~l~~~-ti~~nI~~g~~-----------~-----~~------~~~~~v~~~~~l~~d~~~~~~gd~t~v 727 (1445)
.++|++|+|.++.. |++|||.++.. + ++ ++.++.++..++. ...
T Consensus 79 ~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~ 147 (255)
T PRK11300 79 RMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLL-----------EHA 147 (255)
T ss_pred hcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChh-----------hhh
Confidence 28899999999876 99999997531 0 00 1222333333332 234
Q ss_pred cCCCCccchHHHHHHHHHHHHccCCCEEEEcCCCcCcCHHHHHHHHHHhhcCccc-CCceEEEEccCchhhhh-CCEEEE
Q 000522 728 GEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHM-LQKTRILCTHNVQAISA-ADMVVV 805 (1445)
Q Consensus 728 g~~g~~LSGGQkqRv~lARaly~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~~-~~~t~ilvth~~~~l~~-~d~i~~ 805 (1445)
+....+||||||||++||||++.+|+++||||||++||+...+.+.+. +..... .++|+|++||+++.+.. ||++++
T Consensus 148 ~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~-L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~ 226 (255)
T PRK11300 148 NRQAGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDEL-IAELRNEHNVTVLLIEHDMKLVMGISDRIYV 226 (255)
T ss_pred hCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHH-HHHHHhhcCCEEEEEeCCHHHHHHhCCEEEE
Confidence 567789999999999999999999999999999999999998888776 332122 37899999999999865 999999
Q ss_pred EeCCEEEEecCHhHHH
Q 000522 806 MDKGQVKWIGSSADLA 821 (1445)
Q Consensus 806 l~~G~i~~~g~~~~~~ 821 (1445)
|++|++++.|+.+++.
T Consensus 227 l~~g~i~~~~~~~~~~ 242 (255)
T PRK11300 227 VNQGTPLANGTPEEIR 242 (255)
T ss_pred EECCeEEecCCHHHHh
Confidence 9999999999988764
No 500
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=321.83 Aligned_cols=199 Identities=25% Similarity=0.351 Sum_probs=165.0
Q ss_pred EEEEccEEecccCCccccccceeeeeeEeeCCCEEEEEcCCCCcHHHHHHHHhcCccCCCeEEEEcC-------------
Q 000522 606 VIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGEMMLTHGSIHASG------------- 672 (1445)
Q Consensus 606 i~~~~~~f~w~~~~~~~~~~~l~~i~l~i~~G~~~~ivG~~GsGKStll~~l~g~~~~~~G~i~~~~------------- 672 (1445)
++++|+++.|+. +.+|+|+||++++|++++|+|+||||||||+++|+|+.+|++|+|.++|
T Consensus 3 l~~~~l~~~~~~------~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~ 76 (258)
T PRK13548 3 LEARNLSVRLGG------RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELAR 76 (258)
T ss_pred EEEEeEEEEeCC------eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhh
Confidence 678999998852 2359999999999999999999999999999999999999999999876
Q ss_pred eEEEEcCCCCC-CCccHHHHHhcCCC-C--C----hhhHHHHHHHhcchHHHhhccCCCcccccCCCCccchHHHHHHHH
Q 000522 673 SIAYVPQVPWI-LSGTIRDNILFGKN-Y--D----PQSYSETLKACTLDVDISLMVGGDMAYIGEKGVNLSGGQRARLAL 744 (1445)
Q Consensus 673 ~i~y~~Q~p~l-~~~ti~~nI~~g~~-~--~----~~~~~~v~~~~~l~~d~~~~~~gd~t~vg~~g~~LSGGQkqRv~l 744 (1445)
.++|++|++.+ ++.|++||+.++.. . + +++.+++++..++.... .....+||||||||++|
T Consensus 77 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgGe~qrv~l 145 (258)
T PRK13548 77 RRAVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLA-----------GRDYPQLSGGEQQRVQL 145 (258)
T ss_pred heEEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHh-----------cCCcccCCHHHHHHHHH
Confidence 38999999987 56799999987532 1 1 22345556666654322 34557999999999999
Q ss_pred HHHHc------cCCCEEEEcCCCcCcCHHHHHHHHHHhhcCcc-cCCceEEEEccCchhhh-hCCEEEEEeCCEEEEecC
Q 000522 745 ARAVY------HGSDIYMLDDVLSAVDAQVARWILSNAIMGPH-MLQKTRILCTHNVQAIS-AADMVVVMDKGQVKWIGS 816 (1445)
Q Consensus 745 ARaly------~~~~illlDe~~s~lD~~~~~~i~~~~~~~~~-~~~~t~ilvth~~~~l~-~~d~i~~l~~G~i~~~g~ 816 (1445)
|||++ .+|++++|||||++||+.+.+.+.+. +.... .+++|+|++||+++.+. .||+|++|++|++++.|+
T Consensus 146 a~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~-l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~ 224 (258)
T PRK13548 146 ARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRL-ARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGT 224 (258)
T ss_pred HHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCC
Confidence 99999 59999999999999999999888775 33312 35789999999999987 499999999999999999
Q ss_pred HhHHHh
Q 000522 817 SADLAV 822 (1445)
Q Consensus 817 ~~~~~~ 822 (1445)
++++..
T Consensus 225 ~~~~~~ 230 (258)
T PRK13548 225 PAEVLT 230 (258)
T ss_pred HHHHhC
Confidence 887643
Done!