Query 000522
Match_columns 1445
No_of_seqs 451 out of 5617
Neff 7.9
Searched_HMMs 29240
Date Tue Mar 26 17:11:08 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000522.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_295-299//hhsearch_pdb/000522hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1586.3 108.5 1201 223-1442 2-1302(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1264.2 99.6 1136 278-1441 47-1255(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 738.1 57.4 499 940-1442 137-639 (1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 705.7 48.1 498 939-1441 108-610 (1284)
5 3qf4_B Uncharacterized ABC tra 1.0 1 1 670.2 54.9 544 890-1441 29-575 (598)
6 3qf4_A ABC transporter, ATP-bi 1.0 1 1 670.0 59.6 554 881-1441 6-563 (587)
7 3b60_A Lipid A export ATP-bind 1.0 1 1 649.5 64.2 544 889-1441 16-564 (582)
8 4a82_A Cystic fibrosis transme 1.0 1 1 649.2 53.5 546 889-1441 5-561 (578)
9 3b5x_A Lipid A export ATP-bind 1.0 1 1 645.4 67.2 545 889-1442 16-565 (582)
10 2yl4_A ATP-binding cassette SU 1.0 1 1 635.4 66.9 546 890-1442 11-568 (595)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1586.31 Aligned_cols=1201 Identities=17% Similarity=0.189 Sum_probs=900.5
Q ss_pred HHCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHC-------------CCCCCHHHHHHHHH-HHHHHHHHHHH
Q ss_conf 980124-9888789989999999048999999999983110-------------89984079999999-75969999999
Q 000522 223 MNRGVI-KQLDFEDLLGLPTDMDPSTCHSKLLSCWQAQRSC-------------NCTNPSLVRAICCA-YGYPYICLGLL 287 (1445)
Q Consensus 223 ~~~g~~-~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~-------------~~~~~~l~~~l~~~-~~~~~~~~~~~ 287 (1445)
++.|.+ ++|+..|.+.+.|++..+...+.+++.|.....+ ..++.++ +.+|+- -++..++..+-
T Consensus 2 ~r~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~Lfrya~~~d~~l~~~g 80 (1321)
T 4f4c_A 2 LRNGSLRQSLRTLDSFSLAPEDVLKTAIKTVEDYEGDNIDSNGEIKITRDAKEEVVNKVSI-PQLYRYTTTLEKLLLFIG 80 (1321)
T ss_dssp --CHHHHHHHHHHHHTCCCHHHHHHHHHHHHHTTSTTTBCSSSCBCCSCC---CCSSCCCH-HHHTTTCCHHHHHHHHHH
T ss_pred CCCCHHHCCCCCCCCCCCCCHHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCH-HHHHHCCCHHHHHHHHHH
T ss_conf 8773100687635445679501110000113454243554334310012232025687799-997315676789999999
Q ss_pred HHHHHHHHHHHH---HHHHHHHHHHCC-------C--------CC-CH-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999---999999998525-------8--------88-24-----799999999999999999999999999
Q 000522 288 KVVNDSIGFAGP---LLLNKLIKFLQQ-------G--------SG-HL-----DGYVLAIALGLTSILKSFFDTQYSFHL 343 (1445)
Q Consensus 288 ~l~~~~~~~~~P---~ll~~li~~l~~-------~--------~~-~~-----~g~~l~~~l~~~~~~~a~~~~~~~~~~ 343 (1445)
.++..+...+.| +++.++++.+.+ . .. .. .-..++..++...++..++.-.+.+..
T Consensus 81 ~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~~~ 160 (1321)
T 4f4c_A 81 TLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHDVMNVVWSYAAMTVGMWAAGQITVTCY 160 (1321)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999997010001454300034431001689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999983399322377986699999996699999999-99999997999999989998567679999
Q 000522 344 SKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLA-NSFHDAWSLPFQIGVALYLLYTQVKFAFV 422 (1445)
Q Consensus 344 ~r~~~~~r~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nLms~D~~~i~~~~-~~~~~~w~~pi~i~i~~~lL~~~lG~a~l 422 (1445)
...+.|+-..+...+|+|.++++....++.++|+++|.++.|++++.+++ ..+..++..++.++.++.+++..-..-++
T Consensus 161 ~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~~~~~~~~~i~~~i~~~~~~~~l~l 240 (1321)
T 4f4c_A 161 LYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGMAFQYLSQFITGFIVAFTHSWQLTL 240 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999997889899879984899999999999999999999999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999954999998292699999999999999999999999999
Q 000522 423 SGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKHLSTRKYLDA 502 (1445)
Q Consensus 423 ~g~~v~~~~~~~~~~~~~~~~~~q~~~~~~~d~Rv~~~~e~L~~ik~IK~~~we~~~~~~I~~~R~~El~~~~~~~~l~~ 502 (1445)
+.++++.+..++..++++++.+.+++.++..+++.+.++|.++|||+||+|+||+.+.++..+..++..+...+.....+
T Consensus 241 v~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (1321)
T 4f4c_A 241 VMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRYELERYSTAVEEAKKAGVLKGLFLG 320 (1321)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999983999998214299999999999999999999999999
Q ss_pred HHHHHHHHHHH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
Q ss_conf 99999999989--9999999999880998787689999999999999998999999999999999999999728987622
Q 000522 503 WCVFFWATTPT--LFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTRFLGCSEYKH 580 (1445)
Q Consensus 503 ~~~~~~~~~p~--~~~~~tf~~y~~~~~~L~~~~~Ft~lsl~~~l~~pl~~lp~~i~~~~~a~~s~~RI~~fL~~~e~~~ 580 (1445)
........... ++.++.++.+.+.++.++++.+|+.++++..+..|+..++..++.+.++.+|++||.+||+.++..+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~ 400 (1321)
T 4f4c_A 321 ISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAGPQLAVLGTAQGAASGIYEVLDRKPVID 400 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999999999999599869999999999999999999899999999999999999999971785345
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCC
Q ss_conf 44310299985457886678898449998007861568863335540110268509979999958998378999998638
Q 000522 581 ELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKSSLLNSILGE 660 (1445)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~tf~w~~~~~~~~~~~L~~i~l~i~~G~l~~IvG~vGsGKSTLL~aiLGe 660 (1445)
...... .+ ..+....|+++|++|+|+..++.+. |+|+||++++|+.++||||+|||||||+++|+|+
T Consensus 401 ~~~~~~-~~---------~~~~~g~I~~~nvsF~Y~~~~~~~v---L~~isl~i~~G~~vaivG~sGsGKSTll~ll~~~ 467 (1321)
T 4f4c_A 401 SSSKAG-RK---------DMKIKGDITVENVHFTYPSRPDVPI---LRGMNLRVNAGQTVALVGSSGCGKSTIISLLLRY 467 (1321)
T ss_dssp CSSSCC-CC---------CCCCCCCEEEEEEEECCSSSTTSCS---EEEEEEEECTTCEEEEEECSSSCHHHHHHHHTTS
T ss_pred CCCCCC-CC---------CCCCCCCEEEEEEEEECCCCCCCCE---EECEEEEECCCCEEEEEECCCCCHHHHHHHHCCC
T ss_conf 666556-56---------7788876799985540799998743---3331886228827899805898577888875456
Q ss_pred CCCCCEEEEECC-------------EEEEECCCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHHHCCCCCCCC
Q ss_conf 468870899819-------------0999838887888458899723999-99343999999806527786116997212
Q 000522 661 MMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDISLMVGGDMAY 726 (1445)
Q Consensus 661 ~~~~~G~v~v~g-------------~iayv~Q~pwl~n~TIreNIlfg~~-~d~~~y~~vi~ac~L~~Dl~~lp~GD~T~ 726 (1445)
+++.+|+|.++| +||||+|+|||+|+||||||+||++ .+++++.++++.|++++|++.||+||+|+
T Consensus 468 ~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l~~~i~~lp~G~~T~ 547 (1321)
T 4f4c_A 468 YDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANAEKFIKTLPNGYNTL 547 (1321)
T ss_dssp SCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTCHHHHHHSTTTTSSE
T ss_pred CCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHCCCCCCCCE
T ss_conf 51644861579965011259998504666587533207861678864155220999999998756546887088888607
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHCCEEEEE
Q ss_conf 03798866248999999999981399999980887671899999999996419566896599972581046417989999
Q 000522 727 IGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAISAADMVVVM 806 (1445)
Q Consensus 727 iGe~G~~LSGGQKqRIaLARAvY~~~~I~lLDDplSaLD~~t~~~I~~~~i~g~ll~~kTvIlvTH~~~~l~~aD~Iivl 806 (1445)
|||+|.+||||||||||||||+|++|+|++||||+||||+++++. +++++.+ ++++||+|++||+++.++.||+|++|
T Consensus 548 vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~-i~~~l~~-~~~~~T~iiiaHrls~i~~aD~Iivl 625 (1321)
T 4f4c_A 548 VGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGI-VQQALDK-AAKGRTTIIIAHRLSTIRNADLIISC 625 (1321)
T ss_dssp ESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHH-HHHHHHH-HHTTSEEEEECSCTTTTTTCSEEEEE
T ss_pred ECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHH-HHHHHHH-HHCCCEEEEECCCHHHHHHCCEEEEE
T ss_conf 558988777778799999998725999899845544688789999-9999999-84798899973638789868989996
Q ss_pred ECCEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHH--HH--HHCCC---C--C--------HHHHHHHH----------
Q ss_conf 498799952976887300368654543310122322--32--10013---4--0--------24555421----------
Q 000522 807 DKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQK--QE--MRTNA---S--S--------ANKQILLQ---------- 859 (1445)
Q Consensus 807 ~~G~i~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~---~--~--------~~~~~~~~---------- 859 (1445)
++|+|+++|+++||++.++.+.++..........+. +. ...+. . . ...+....
T Consensus 626 ~~G~ive~Gth~eL~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 705 (1321)
T 4f4c_A 626 KNGQVVEVGDHRALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDIMNRVRSSTIGSI 705 (1321)
T ss_dssp ETTEEEEEECHHHHHTTTCHHHHHHHHHHHHHHHHHHHCC----------------------------------------
T ss_pred ECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
T ss_conf 39965136899999985327999999622122223323344332232111222223422222221102211101321245
Q ss_pred ------HCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf ------01235677305677899877417400566899874122-78999999999999999843566766421145787
Q 000522 860 ------EKDVVSVSDDAQEIIEVEQRKEGRVELTVYKNYAKFSG-WFITLVICLSAILMQASRNGNDLWLSYWVDTTGSS 932 (1445)
Q Consensus 860 ------~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~y~~~~g-~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~ 932 (1445)
+++.............++.++.+.....+|..|....+ |...++.++...+.........+|+..|.+.....
T Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 785 (1321)
T 4f4c_A 706 TNGPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGN 785 (1321)
T ss_dssp ----------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSC
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 67740257775315403899999999707863109999999877899999999999999999999999999999875179
Q ss_pred --CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCHHHHHHHHHHHHHH
Q ss_conf --887651478999999999999999999999999999999999999999885496444356--7733799999812978
Q 000522 933 --QTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQ--TPGGRILNRFSSDLYM 1008 (1445)
Q Consensus 933 --~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~il~~p~~ff~~--~~~G~ilnRfs~D~~~ 1008 (1445)
.......+|.++|++++++..++.++..+.+...+.+.+.++|++++++++++|++|||+ +|+|+++|||++|++.
T Consensus 786 ~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~ 865 (1321)
T 4f4c_A 786 PADFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPN 865 (1321)
T ss_dssp SSTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHH
T ss_conf 34556678999999999999999999999999999999999999999988873499333216788848888502505999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH
Q ss_conf 75335799999999998678866469878789999999999999999999999999999998752061375799843338
Q 000522 1009 IDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGS 1088 (1445)
Q Consensus 1009 id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~etl~Gl 1088 (1445)
+|+.++..+..++..++.+++.++++.+..|++++++++++.++++...++.+..+........+.++...++.|+++|+
T Consensus 866 i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi 945 (1321)
T 4f4c_A 866 LRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENV 945 (1321)
T ss_dssp HHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999865377770221378689999999988899999999999999999999999888988999999627
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99985093899999999999999998999999985689999999999999999999984158887776209999999999
Q 000522 1089 STIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSY 1168 (1445)
Q Consensus 1089 ~tIRaf~~e~~~~~~~~~~ld~~~~~~~~~~~~~~wl~~~l~~i~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~ 1168 (1445)
.+||+|++|+++.+++.+.++...+..+.....+.+.......+..+...++......... ......+++.+...+.+
T Consensus 946 ~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~--~~~~~~~~~~~~~~~~~ 1023 (1321)
T 4f4c_A 946 RTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALII--TDPPTMQPMRVLRVMYA 1023 (1321)
T ss_dssp HHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTS--SSSCSSCHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCHHHHHHHHHH
T ss_conf 9888614148899999999999999999999999999999999999999999987578875--37654214789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEE
Q ss_conf 99999999999999999999878999999841387000016789999999876299999999847999-96320013998
Q 000522 1169 AAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSL-PAALHDINFTI 1247 (1445)
Q Consensus 1169 ~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~-~~vL~~isl~I 1247 (1445)
......++..+...+.+++..+.+++|+.++.+.++|... ...+++.||..|.|+|+||+|+|+++. .+||+|+||+|
T Consensus 1024 ~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~-~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I 1102 (1321)
T 4f4c_A 1024 ITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDS-LSLAGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSV 1102 (1321)
T ss_dssp HHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCT-TCCCSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEE
T ss_conf 9877889999999999999999999989998607665777-667787888888189998798579999882124516998
Q ss_pred ECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCC---CCC
Q ss_conf 58939999879999888999988347989873799979617999927561241888277765675478723979---999
Q 000522 1248 EGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPF---HMN 1324 (1445)
Q Consensus 1248 ~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~IpQdp~lF~gTIR~NLdp~---~~~ 1324 (1445)
+|||+||||||||||||||+++|+|+|+|++|+|.|||+||+++++++||++|++|||||++|+||||+||..+ .++
T Consensus 1103 ~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~ 1182 (1321)
T 4f4c_A 1103 EPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSV 1182 (1321)
T ss_dssp CTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTS
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCCC
T ss_conf 89899999899998199999999568638997899999986549999998545998789973272399997454999999
Q ss_pred CHHHHHHHHHHCCHHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 927799999981389999958--994055149999993499999999986259979998465668899979999999987
Q 000522 1325 DDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISS 1402 (1445)
Q Consensus 1325 sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~ 1402 (1445)
+|+++|+|+++++++++|+++ ||||.|+|+|.+||||||||+|||||++|+|+|||||||||+||.+||+.||++|++
T Consensus 1183 sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~ 1262 (1321)
T 4f4c_A 1183 TMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDR 1262 (1321)
T ss_dssp CHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999998298499971767899982388915699999999999999717998999681115789999999999999
Q ss_pred HCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCCCCC
Q ss_conf 2799479985169137865197999939748310279999
Q 000522 1403 ECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1403 ~f~~~TvI~IaHrl~ti~~~D~I~vl~~G~ivE~g~p~~~ 1442 (1445)
.+++||+|+||||++||++||+|+|||+|+|+|+|+|.+.
T Consensus 1263 ~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eL 1302 (1321)
T 4f4c_A 1263 AREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQL 1302 (1321)
T ss_dssp TSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHH
T ss_pred HCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 7399989996068999996999999989899998888999
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1264.18 Aligned_cols=1136 Identities=17% Similarity=0.202 Sum_probs=817.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------CC-----------C-HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 59699999999999999999999999999985258--------88-----------2-4799999999999999999999
Q 000522 278 GYPYICLGLLKVVNDSIGFAGPLLLNKLIKFLQQG--------SG-----------H-LDGYVLAIALGLTSILKSFFDT 337 (1445)
Q Consensus 278 ~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~l~~~--------~~-----------~-~~g~~l~~~l~~~~~~~a~~~~ 337 (1445)
++.++...+..++..++....|+++..+++.+... .. . .....++..++.+.++..++.-
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (1284)
T 3g5u_A 47 RLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAY 126 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999998613444332222221111100244688999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH--
Q ss_conf 9999999999999999999999998339932237798669999999669999999999-9999979999999899985--
Q 000522 338 QYSFHLSKLKLKLRSSIMTIIYQKCLYVRLAERSEFSDGEIQTFMSVDTDRTVNLANS-FHDAWSLPFQIGVALYLLY-- 414 (1445)
Q Consensus 338 ~~~~~~~r~~~~~r~~L~~~Iy~K~L~l~~~~~~~~~~g~i~nLms~D~~~i~~~~~~-~~~~w~~pi~i~i~~~lL~-- 414 (1445)
...+...+.+.++-..+...+|+|.++++.....+.++|+++|.++.|++.+.+.... +..+....+.++.++.++.
T Consensus 127 ~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 206 (1284)
T 3g5u_A 127 IQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTR 206 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999998699899756887789999998899999999999999999999999999999999
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -6767999999999999999999999999999999999999999999999954999998292699999999999999999
Q 000522 415 -TQVKFAFVSGLAITILLIPVNKWIANLIANATEKMMKQKDERIRRTGEILTHIRTLKMYGWEQIFSSWLMKTRSSEVKH 493 (1445)
Q Consensus 415 -~~lG~a~l~g~~v~~~~~~~~~~~~~~~~~~q~~~~~~~d~Rv~~~~e~L~~ik~IK~~~we~~~~~~I~~~R~~El~~ 493 (1445)
+.+... .++++.++..+..++.+.+.+..++..+..++..+...|.++||++||.|++|+.+.++..+.-++-.+.
T Consensus 207 ~~~l~l~---~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~~~~~~~~~~~~~~~~ 283 (1284)
T 3g5u_A 207 GWKLTLV---ILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRL 283 (1284)
T ss_dssp TSSSHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 8999999---9999999999999999999999999999999999999999978799998465399999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999998--99999999999880998787689999999999999998999999999999999999999
Q 000522 494 LSTRKYLDAWCVFFWATTP--TLFSLFTFGLFALMGHQLDAAMVFTCLALFNSLISPLNSFPWVINGLIDAFISIRRLTR 571 (1445)
Q Consensus 494 ~~~~~~l~~~~~~~~~~~p--~~~~~~tf~~y~~~~~~L~~~~~Ft~lsl~~~l~~pl~~lp~~i~~~~~a~~s~~RI~~ 571 (1445)
..+..........+..... ..+..++++.+.+..+.++++.+++.+..+.....|+..+...+..+.++..+.+|+.+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~ 363 (1284)
T 3g5u_A 284 GIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFK 363 (1284)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999299889999999999999999999999999999999999999999
Q ss_pred HHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHH
Q ss_conf 72898762244310299985457886678898449998007861568863335540110268509979999958998378
Q 000522 572 FLGCSEYKHELEQAANSPSYISNGLSNFNSKDMAVIMQDATCSWYCNNEEEQNVVLNQVSLCLPKGSLVAVIGEVGSGKS 651 (1445)
Q Consensus 572 fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~tf~w~~~~~~~~~~~L~~i~l~i~~G~l~~IvG~vGsGKS 651 (1445)
+++.++..+........+ ......++++|++|+|+.+.+.+. |+|+||++++|+.++|+||+|||||
T Consensus 364 ~l~~~~~~~~~~~~~~~~----------~~~~g~i~~~~v~~~y~~~~~~~v---L~~isl~i~~G~~~~ivG~sGsGKS 430 (1284)
T 3g5u_A 364 IIDNKPSIDSFSKSGHKP----------DNIQGNLEFKNIHFSYPSRKEVQI---LKGLNLKVKSGQTVALVGNSGCGKS 430 (1284)
T ss_dssp TTSCCCCCSSCCSSCCCC----------TTCCCCEEEEEEEECCSSTTSCCS---EEEEEEEECTTCEEEEECCSSSSHH
T ss_pred HHCCCCCCCCCCCCCCCC----------CCCCCEEEEEEEEEECCCCCCCCC---EECCEEEECCCCEEEEECCCCCCHH
T ss_conf 972898677666567777----------777771899998997699998710---1254589759988999899999799
Q ss_pred HHHHHHHCCCCCCCEEEEECC-------------EEEEECCCCCCCCCCHHHHHHCCCC-CCHHHHHHHHHHHCCHHHHH
Q ss_conf 999998638468870899819-------------0999838887888458899723999-99343999999806527786
Q 000522 652 SLLNSILGEMMLTHGSIHASG-------------SIAYVPQVPWILSGTIRDNILFGKN-YDPQSYSETLKACTLDVDIS 717 (1445)
Q Consensus 652 TLL~aiLGe~~~~~G~v~v~g-------------~iayv~Q~pwl~n~TIreNIlfg~~-~d~~~y~~vi~ac~L~~Dl~ 717 (1445)
||+++|+|++++.+|+|.++| .|+||+|+||++++||+|||.+|.+ .+++++.++++.|++.++++
T Consensus 431 Tl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~ 510 (1284)
T 3g5u_A 431 TTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDFIM 510 (1284)
T ss_dssp HHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHHHH
T ss_pred HHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHH
T ss_conf 99999807889997389999998775799999865489868875377669999745798999999999999829699997
Q ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHH
Q ss_conf 11699721203798866248999999999981399999980887671899999999996419566896599972581046
Q 000522 718 LMVGGDMAYIGEKGVNLSGGQRARLALARAVYHGSDIYMLDDVLSAVDAQVARWILSNAIMGPHMLQKTRILCTHNVQAI 797 (1445)
Q Consensus 718 ~lp~GD~T~iGe~G~~LSGGQKqRIaLARAvY~~~~I~lLDDplSaLD~~t~~~I~~~~i~g~ll~~kTvIlvTH~~~~l 797 (1445)
.+|+|++|.+||+|.+|||||||||+||||+|++|+|++||||+|+||+++++.+.+. +.. +.+++|+|++||+++.+
T Consensus 511 ~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~-l~~-~~~~~t~i~itH~l~~i 588 (1284)
T 3g5u_A 511 KLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAA-LDK-AREGRTTIVIAHRLSTV 588 (1284)
T ss_dssp HSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHH-HHH-HHTTSEEEEECSCHHHH
T ss_pred HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH-HHH-HCCCCEEEEEECCHHHH
T ss_conf 4656334501478786599999999999999529998999798777799999999999-999-73999899994077899
Q ss_pred HHCCEEEEEECCEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHH--HH----HHHC---CCC-CHHHHHHHHHCC-CC--
Q ss_conf 41798999949879995297688730036865454331012232--23----2100---134-024555421012-35--
Q 000522 798 SAADMVVVMDKGQVKWIGSSADLAVSLYSGFWSTNEFDTSLHMQ--KQ----EMRT---NAS-SANKQILLQEKD-VV-- 864 (1445)
Q Consensus 798 ~~aD~Iivl~~G~i~~~G~~~~l~~~~~~~~~~~~~~~~~~~~~--~~----~~~~---~~~-~~~~~~~~~~~~-~~-- 864 (1445)
..||+|++|++|+++++|+++++....+.+.+............ .. .... ... ............ ..
T Consensus 589 ~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (1284)
T 3g5u_A 589 RNADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRSTRKSI 668 (1284)
T ss_dssp TTCSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHTC------------------------------------------
T ss_pred HCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 74998999989999997889999867877999999743002211133333322222344333333332000345433344
Q ss_pred -CCCCHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC----CCC
Q ss_conf -67730567789987741--74005668998741227899999999999999984356676642114578788----765
Q 000522 865 -SVSDDAQEIIEVEQRKE--GRVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQT----KYS 937 (1445)
Q Consensus 865 -~~~~~~~~~~~~e~~~~--g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~----~~~ 937 (1445)
...+.......++..+. ....+..+..|.+.. |...++.+++.++..+......+++..|.+....... ...
T Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 747 (1284)
T 3g5u_A 669 CGPHDQDRKLSTKEALDEDVPPASFWRILKLNSTE-WPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQN 747 (1284)
T ss_dssp ---------------CCCCCSCCCTTHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHHHHH
T ss_pred CCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 56422332110245553136625899999984515-79999999999999999999999999999998556850336779
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 147899999999999999999999999999999999999999988549644435--677337999998129787533579
Q 000522 938 TSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFD--QTPGGRILNRFSSDLYMIDDSLPF 1015 (1445)
Q Consensus 938 ~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~il~~p~~ff~--~~~~G~ilnRfs~D~~~id~~l~~ 1015 (1445)
...|..+|++++++..++.++..+.+.+.+.+...++|.+++++++++|++||+ .+++|+++||+++|+..++..++.
T Consensus 748 ~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~ 827 (1284)
T 3g5u_A 748 SNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGS 827 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999983998887578998899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHCCHHHHHHHHHHCCHHH
Q ss_conf 999999999867886646987878---99999999999999999999999--9999999875206137579984333899
Q 000522 1016 ILNILLANFVGLLGIAVVLSYVQV---FFLLLLVPFWFIYSKLQFFYRST--SRELRRLDSVSRSPIYASFTETLNGSST 1090 (1445)
Q Consensus 1016 ~l~~~~~~~~~~i~~~~~i~~~~~---~~~~~~~pl~~~~~~i~~~y~~~--sr~l~rl~~~~~spl~~~~~etl~Gl~t 1090 (1445)
.+..++..+..++..++++.+..| +++++.+|+.+++..++..+.+. .+..+.. +....++.|+++|+.+
T Consensus 828 ~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~e~l~gi~t 902 (1284)
T 3g5u_A 828 RLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKEL-----EGSGKIATEAIENFRT 902 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999996999999999999999999999999999999999999-----9999999999988999
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 98509389999999999999999899999998568999999999999999999998415888777620999999999999
Q 000522 1091 IRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAA 1170 (1445)
Q Consensus 1091 IRaf~~e~~~~~~~~~~ld~~~~~~~~~~~~~~wl~~~l~~i~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~ 1170 (1445)
||+|++|+.+.+++.+..+...+..... .+|.+....+...+.....+....++.. ....+..+.+.+...+.+..
T Consensus 903 i~a~~~e~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~-lv~~~~~~~~~~~~~~~~~~ 978 (1284)
T 3g5u_A 903 VVSLTREQKFETMYAQSLQIPYRNAMKK---AHVFGITFSFTQAMMYFSYAAAFRFGAY-LVTQQLMTFENVLLVFSAIV 978 (1284)
T ss_dssp TTTCSSHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCSSSCSCSTTHHHHHHHHH
T ss_pred HHHHCCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCHHHHHHHHHHHH
T ss_conf 9984659999999999999999999999---9999999999999999999999999999-99909806999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCCEEEEEEEEC
Q ss_conf 99999999999999999987899999984138700001678999999987629999999984799-99632001399858
Q 000522 1171 PIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEG 1249 (1445)
Q Consensus 1171 ~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~ 1249 (1445)
....++..+...+.++.....+.+|+.++.+.+++.........+.++..|.|+|+||+++|+.. ..++|+|+||+|++
T Consensus 979 ~~~~~~~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~ 1058 (1284)
T 3g5u_A 979 FGAMAVGQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKK 1058 (1284)
T ss_dssp HHHHHHHHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECC
T ss_conf 99999999999999999999999999999838876666555665456777857999989977999987002030599769
Q ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC---CCCH
Q ss_conf 9399998799998889999883479898737999796179999275612418882777656754787239799---9992
Q 000522 1250 GTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH---MNDD 1326 (1445)
Q Consensus 1250 GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~IpQdp~lF~gTIR~NLdp~~---~~sd 1326 (1445)
||++||||+||||||||+++|+|+++|++|+|.+||+|++.++++.+|+++++|||||.+|++|||+|+.++. ..++
T Consensus 1059 Ge~v~ivG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~ 1138 (1284)
T 3g5u_A 1059 GQTLALVGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSY 1138 (1284)
T ss_dssp SSEEEEECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCH
T ss_pred CCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCH
T ss_conf 98899988999978999999946867899779899998000789999702689877874066669999746687789999
Q ss_pred HHHHHHHHHCCHHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 7799999981389999958--99405514999999349999999998625997999846566889997999999998727
Q 000522 1327 LKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSEC 1404 (1445)
Q Consensus 1327 ~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f 1404 (1445)
+++++++++++++++++.+ |+||.++|+|.+||||||||+|||||++++|+||+||||||+||.++++.|++.|++..
T Consensus 1139 ~~i~~~~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~ 1218 (1284)
T 3g5u_A 1139 EEIVRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAR 1218 (1284)
T ss_dssp HHHHHHHHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHC
T ss_conf 99999999839599997270424561178889338999999999999974999999868755579999999999999867
Q ss_pred CCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCCCC
Q ss_conf 9947998516913786519799993974831027999
Q 000522 1405 KGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1405 ~~~TvI~IaHrl~ti~~~D~I~vl~~G~ivE~g~p~~ 1441 (1445)
+++|+|+||||++++.+||||+||++|+++|.|+|.+
T Consensus 1219 ~~~tvi~isH~l~~i~~~dri~vl~~G~i~~~g~~~~ 1255 (1284)
T 3g5u_A 1219 EGRTCIVIAHRLSTIQNADLIVVIQNGKVKEHGTHQQ 1255 (1284)
T ss_dssp SSSCEEEECSCTTGGGSCSEEEEEETBEEEEEECHHH
T ss_pred CCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHH
T ss_conf 9998999955879998099899998998999778999
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=738.10 Aligned_cols=499 Identities=19% Similarity=0.226 Sum_probs=422.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78999999999999999999999999999999999999999885496444356773379999981297875335799999
Q 000522 940 FYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNI 1019 (1445)
Q Consensus 940 ~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~ 1019 (1445)
.+...+++++++..++.++..+++.+.+.+...+++.++++++++.|++|||++++|+++||+++|++.+++.+...+..
T Consensus 137 ~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~~~G~l~sr~~~D~~~i~~~~~~~l~~ 216 (1321)
T 4f4c_A 137 NVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTNHSGTLATKLFDNLERVKEGTGDKIGM 216 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHTCCTTHHHHHHHHHHHHHHTSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999997889899879984899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHHH
Q ss_conf 99999867886646987878999999999999999999999999999999875206137579984333899985093899
Q 000522 1020 LLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDY 1099 (1445)
Q Consensus 1020 ~~~~~~~~i~~~~~i~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~etl~Gl~tIRaf~~e~~ 1099 (1445)
++..++.+++.++++.+..|.++++++....++..+..++.+..+...+......+...+++.|+++|+++||+|++|+.
T Consensus 217 ~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~ 296 (1321)
T 4f4c_A 217 AFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNGLRY 296 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999983999998214299
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999899999998568999999999999999999998415888777620999999999999999999999
Q 000522 1100 FMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNF 1179 (1445)
Q Consensus 1100 ~~~~~~~~ld~~~~~~~~~~~~~~wl~~~l~~i~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l 1179 (1445)
+.+++.+..+...+..........+......++..+...++..+..... ..+..++|.+..++.+...+..++..+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v----~~g~lt~g~~~~~~~~~~~~~~~l~~~ 372 (1321)
T 4f4c_A 297 ELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWV----HDGSLNFGDMLTTFSSVMMGSMALGLA 372 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----TTTSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999999999----959986999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCCEEEEEEEECCCEEEEECC
Q ss_conf 99999999987899999984138700001678999999987629999999984799-99632001399858939999879
Q 000522 1180 LSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGR 1258 (1445)
Q Consensus 1180 ~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGr 1258 (1445)
...+..+....+|.+|+.++++.+++............+.+|.|+|+||+|+|+.. ..++|+|+||+|+|||++||||+
T Consensus 373 ~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~ 452 (1321)
T 4f4c_A 373 GPQLAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGS 452 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEEC
T ss_conf 99999999999999999999717853456665565677888767999855407999987433331886228827899805
Q ss_pred CCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCCC-CCHHHHHHHHHHCC
Q ss_conf 99988899998834798987379997961799992756124188827776567547872397999-99277999999813
Q 000522 1259 TGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM-NDDLKIWSVLEKCH 1337 (1445)
Q Consensus 1259 TGSGKSTL~~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~IpQdp~lF~gTIR~NLdp~~~-~sd~ei~~aL~~~~ 1337 (1445)
||||||||+++|+|+|+|++|+|.+||+|+++++++++|++++||||||++|+|||||||..+.+ .+|+++++|++.++
T Consensus 453 sGsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~ 532 (1321)
T 4f4c_A 453 SGCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMAN 532 (1321)
T ss_dssp SSSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 89857788887545651644861579965011259998504666587533207861678864155220999999998756
Q ss_pred HHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 89999958--9940551499999934999999999862599799984656688999799999999872799479985169
Q 000522 1338 VKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHR 1415 (1445)
Q Consensus 1338 l~~~i~~l--gLdt~v~e~G~~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~IaHr 1415 (1445)
+.++++.+ |+||.|||+|.+||||||||+|||||++++|+|+|||||||+||.+||+.+++.|++..+++|+|+||||
T Consensus 533 l~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHr 612 (1321)
T 4f4c_A 533 AEKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHR 612 (1321)
T ss_dssp CHHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSC
T ss_pred CHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 54688708888860755898877777879999999872599989984554468878999999999998479889997363
Q ss_pred HHHHHHCCEEEEEECCEEEEECCCCCC
Q ss_conf 137865197999939748310279999
Q 000522 1416 ISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1416 l~ti~~~D~I~vl~~G~ivE~g~p~~~ 1442 (1445)
++++.+||+|+||++|+|+|.|+|.+.
T Consensus 613 ls~i~~aD~Iivl~~G~ive~Gth~eL 639 (1321)
T 4f4c_A 613 LSTIRNADLIISCKNGQVVEVGDHRAL 639 (1321)
T ss_dssp TTTTTTCSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHCCEEEEEECCEEECCCCHHHH
T ss_conf 878986898999639965136899999
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=705.74 Aligned_cols=498 Identities=20% Similarity=0.227 Sum_probs=417.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 47899999999999999999999999999999999999999988549644435677337999998129787533579999
Q 000522 939 SFYLVVLCIFCMFNSFLTLVRAFSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILN 1018 (1445)
Q Consensus 939 ~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~ 1018 (1445)
..|.++|++++++..++.++..+.+.+.+.+...++|.++++++++.|++|||++++|+++||+++|++.+++.++..+.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~~~G~l~sr~~~D~~~i~~~~~~~~~ 187 (1284)
T 3g5u_A 108 TTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGDKIG 187 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999869989975688778999999889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHH
Q ss_conf 99999986788664698787899999999999999999999999999999987520613757998433389998509389
Q 000522 1019 ILLANFVGLLGIAVVLSYVQVFFLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSED 1098 (1445)
Q Consensus 1019 ~~~~~~~~~i~~~~~i~~~~~~~~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~etl~Gl~tIRaf~~e~ 1098 (1445)
.++..++.+++.++++.+..|.++++++.+..++..+..++.+..+...+....+.+++.+++.|+++|+.+||+|++|+
T Consensus 188 ~~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~ 267 (1284)
T 3g5u_A 188 MFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQK 267 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHH
T ss_conf 99999999999999999998999999999999999999999999999999999999999999999997879999846539
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999899999998568999999999999999999-9984158887776209999999999999999999
Q 000522 1099 YFMAKFKEHVVLYQRTSYSELTASLWLSLRLQLLAAFIISFIATM-AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLG 1177 (1445)
Q Consensus 1099 ~~~~~~~~~ld~~~~~~~~~~~~~~wl~~~l~~i~~~~~~~~~~~-~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~ 1177 (1445)
++.+++.+..+...+..........+......++..+...++... ..+.. .+..++|.+..++.+......++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-----~g~~~~g~~~~~~~~~~~~~~~~~ 342 (1284)
T 3g5u_A 268 KELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVI-----SKEYSIGQVLTVFFSVLIGAFSVG 342 (1284)
T ss_dssp SHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HSSSCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999999999999999999999999999999999999-----299889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCC-CCCCCEEEEEEEECCCEEEEE
Q ss_conf 9999999999987899999984138700001678999999987629999999984799-996320013998589399998
Q 000522 1178 NFLSSFTETEKEMVSLERVLEYMDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIV 1256 (1445)
Q Consensus 1178 ~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIv 1256 (1445)
.+...+..+.....+++|+.++.+.+++............+.+|.|+|+||+++|+++ .+++|+|+||+|+|||++|||
T Consensus 343 ~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~iv 422 (1284)
T 3g5u_A 343 QASPNIEAFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALV 422 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEE
T ss_conf 99999999999999999999997289867766656777777777189999899769999871012545897599889998
Q ss_pred CCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHH
Q ss_conf 799998889999883479898737999796179999275612418882777656754787239799-9992779999998
Q 000522 1257 GRTGAGKSSILNALFRLTPICGGQILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEK 1335 (1445)
Q Consensus 1257 GrTGSGKSTL~~~L~rl~~~~~G~I~IdG~di~~i~~~~lR~~i~~IpQdp~lF~gTIR~NLdp~~-~~sd~ei~~aL~~ 1335 (1445)
|+||||||||+++|.|+++|++|+|.+||.|+++++.+++|+++++|||||++|++|||||+.++. ..++++++++++.
T Consensus 423 G~sGsGKSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~ 502 (1284)
T 3g5u_A 423 GNSGCGKSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKE 502 (1284)
T ss_dssp CCSSSSHHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHH
T ss_conf 99999799999998078899973899999987757999998654898688753776699997457989999999999998
Q ss_pred CCHHHHHHHC--CCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 1389999958--99405514999999349999999998625997999846566889997999999998727994799851
Q 000522 1336 CHVKEEVEAV--GLETFVKESGISFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIA 1413 (1445)
Q Consensus 1336 ~~l~~~i~~l--gLdt~v~e~G~~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~Ia 1413 (1445)
+++.++++.+ |+|+.++|+|.+||||||||+|||||++++|+|||||||||+||.+|++.+++.+++..+++|+|+||
T Consensus 503 ~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~it 582 (1284)
T 3g5u_A 503 ANAYDFIMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIA 582 (1284)
T ss_dssp TTCHHHHHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 29699997465633450147878659999999999999952999899979877779999999999999973999899994
Q ss_pred CCHHHHHHCCEEEEEECCEEEEECCCCC
Q ss_conf 6913786519799993974831027999
Q 000522 1414 HRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1414 Hrl~ti~~~D~I~vl~~G~ivE~g~p~~ 1441 (1445)
||++++.+||+|+||++|+++|.|+|.+
T Consensus 583 H~l~~i~~~d~i~vl~~G~i~~~g~~~~ 610 (1284)
T 3g5u_A 583 HRLSTVRNADVIAGFDGGVIVEQGNHDE 610 (1284)
T ss_dssp SCHHHHTTCSEEEECSSSCCCCEECHHH
T ss_pred CCHHHHHCCCEEEEEECCEEEEECCHHH
T ss_conf 0778997499899998999999788999
No 5
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=670.22 Aligned_cols=544 Identities=25% Similarity=0.347 Sum_probs=455.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99874122789999999999999998435667664211457878876514789999999999999999999999999999
Q 000522 890 KNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRAFSFAFGSLR 969 (1445)
Q Consensus 890 ~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 969 (1445)
..|++...+.+ +..+++.++..+.....+++++.+++.............++.+++++.++..++..+..+.....+.+
T Consensus 29 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (598)
T 3qf4_B 29 LGYLRPHTFTL-IMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQD 107 (598)
T ss_dssp GGGTGGGHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999-99999999999999999999999999997368889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999885496444356773379999981297875335799999999998678866469878789999999999
Q 000522 970 AAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVPFW 1049 (1445)
Q Consensus 970 ~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~~~~~~pl~ 1049 (1445)
...++|.++++++++.|+.||+++++|+++||+++|++.+++.+...+..++..++.+++.++++.+..|+++++.+.+.
T Consensus 108 ~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~l~~l~~~ 187 (598)
T 3qf4_B 108 VVFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIV 187 (598)
T ss_dssp HHHHHHHHHHHHHHHSCTHHHHHSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999997799999768888999999999999999999999999999999999999999999899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999875206137579984333899985093899999999999999998999999985689999
Q 000522 1050 FIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSLRL 1129 (1445)
Q Consensus 1050 ~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~etl~Gl~tIRaf~~e~~~~~~~~~~ld~~~~~~~~~~~~~~wl~~~l 1129 (1445)
.++..+..++.+..++..+......+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+..........+.....
T Consensus 188 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (598)
T 3qf4_B 188 PLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLM 267 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999737999997487099999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99999999999999998415888777620999999999999999999999999999999878999999841387000016
Q 000522 1130 QLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEELCG 1209 (1445)
Q Consensus 1130 ~~i~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~~~ 1209 (1445)
+++..+...++..+..... ..+..++|.+...+.+...+..++..+...+.+++....+++|+.++.+.++|...
T Consensus 268 ~~~~~~~~~~~~~~g~~l~----~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~- 342 (598)
T 3qf4_B 268 NMVNNLGFALISGFGGWLA----LKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDD- 342 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHG----GGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-
T ss_conf 9999999999999999999----85997899999999999999999999999999999999999999999768877777-
Q ss_pred CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECC
Q ss_conf 78999999987629999999984799996320013998589399998799998889999883479898737999796179
Q 000522 1210 YQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLNII 1289 (1445)
Q Consensus 1210 ~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IdG~di~ 1289 (1445)
....+.++..|.|+++||+++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|+.
T Consensus 343 -~~~~~~~~~~~~i~~~~v~~~y~~~-~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~i~ 420 (598)
T 3qf4_B 343 -PDAVELREVRGEIEFKNVWFSYDKK-KPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIR 420 (598)
T ss_dssp -SSCCCCCSCCCCEEEEEEECCSSSS-SCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEETTEEGG
T ss_pred -CCCCCCCCCCCEEEEEEEEEECCCC-CCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCEEHH
T ss_conf -7777777777718999989977999-86012227998699889998999996999999994585799808999999830
Q ss_pred CCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCHHHHHHHC--CCCHHHHCCCCCCCHHHHHHH
Q ss_conf 999275612418882777656754787239799-99927799999981389999958--994055149999993499999
Q 000522 1290 NTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQRQLI 1366 (1445)
Q Consensus 1290 ~i~~~~lR~~i~~IpQdp~lF~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LS~GQrQll 1366 (1445)
+++.+++|++++++||||.+|++|+|||+.++. ..++++++++++.+++.++++.+ |+|+.++|+|.+||||||||+
T Consensus 421 ~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgGq~Qrv 500 (598)
T 3qf4_B 421 KIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLL 500 (598)
T ss_dssp GSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHHHHHHH
T ss_pred HCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHHHHHHH
T ss_conf 18899998410899079823246399997447999999999999999697888974645323642278898799999999
Q ss_pred HHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCCCC
Q ss_conf 999986259979998465668899979999999987279947998516913786519799993974831027999
Q 000522 1367 CLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1367 ~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~IaHrl~ti~~~D~I~vl~~G~ivE~g~p~~ 1441 (1445)
|||||++++|+|++||||||++|+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|+|.+
T Consensus 501 ~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~ 575 (598)
T 3qf4_B 501 AITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDE 575 (598)
T ss_dssp HHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHH
T ss_pred HHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHH
T ss_conf 999999649999999897667999999999999999808998999942778997199899998999998778999
No 6
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=669.98 Aligned_cols=554 Identities=22% Similarity=0.280 Sum_probs=436.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 17400566899874122789999999999999998435667664211457878876514789999999999999999999
Q 000522 881 EGRVELTVYKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLVVLCIFCMFNSFLTLVRA 960 (1445)
Q Consensus 881 ~g~v~~~~y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~ 960 (1445)
.|...+..+..|++...+.+... +++.++..++....+++++++++.............+..+++++.++..++..+..
T Consensus 6 ~g~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (587)
T 3qf4_A 6 GGGGGSKTLARYLKPYWIFAVLA-PLFMVVEVICDLSQPTLLARIVDEGIARGDFSLVLKTGILMLIVALIGAVGGIGCT 84 (587)
T ss_dssp --CCCCCCGGGGTGGGHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98534999999999999999999-99999999999999999999999987369879999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999885496444356773379999981297875335799999999998678866469878789
Q 000522 961 FSFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVF 1040 (1445)
Q Consensus 961 ~~~~~~~~~~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~ 1040 (1445)
+...+.+.+...++|.++++++++.|+.||+++++|+++||+++|++.+++.+...+..++...+.+++.++++.+..|.
T Consensus 85 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 164 (587)
T 3qf4_A 85 VFASYASQNFGADLRRDLFRKVLSFSISNVNRFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVK 164 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999997889799765888999999999999999999999999999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999875206137579984333899985093899999999999999998999999
Q 000522 1041 FLLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELT 1120 (1445)
Q Consensus 1041 ~~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~etl~Gl~tIRaf~~e~~~~~~~~~~ld~~~~~~~~~~~ 1120 (1445)
+.++++....++..+..++.+..+...+......+.+.+.+.|+++|+.+||+|++|+.+.+++.+..+...+.......
T Consensus 165 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 244 (587)
T 3qf4_A 165 LSSVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFS 244 (587)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999855999998621499999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 985689999999999999999999-9841588877762099999999999999999999999999999987899999984
Q 000522 1121 ASLWLSLRLQLLAAFIISFIATMA-VIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEY 1199 (1445)
Q Consensus 1121 ~~~wl~~~l~~i~~~~~~~~~~~~-v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~ 1199 (1445)
...+......++..+...++.... .... .+..+.|.+..++.+...+..++..+...+..+.....+.+|+.++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~vl~~g~~~v~-----~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~ 319 (587)
T 3qf4_A 245 LIVFALPLFIFIVNMGMIAVLWFGGVLVR-----NNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEV 319 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999998-----4993899999999999999999999999999999999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 13870000167899999998762999999998479999632001399858939999879999888999988347989873
Q 000522 1200 MDVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGG 1279 (1445)
Q Consensus 1200 ~~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G 1279 (1445)
.+.+++..... .+.+.++..|.|+++||+++|+++.+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|
T Consensus 320 l~~~~~~~~~~-~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G 398 (587)
T 3qf4_A 320 LNEKPAIEEAD-NALALPNVEGSVSFENVEFRYFENTDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERG 398 (587)
T ss_dssp HHCCCSCCCCT-TCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEE
T ss_pred HCCCCCCCCCC-CCCCCCCCCCCEEEEEEEEECCCCCCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 76897657887-76566888880799788998489997642111799869988999899999799999999278669986
Q ss_pred EEEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCHHHHHHHC--CCCHHHHCCCC
Q ss_conf 7999796179999275612418882777656754787239799-99927799999981389999958--99405514999
Q 000522 1280 QILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGI 1356 (1445)
Q Consensus 1280 ~I~IdG~di~~i~~~~lR~~i~~IpQdp~lF~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~ 1356 (1445)
+|.+||+|+.+++.+++|++++++||||.+|++|+|||+.++. ..++++++++++.+++.++++.+ |+|+.+++.|.
T Consensus 399 ~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~ 478 (587)
T 3qf4_A 399 RVEVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGR 478 (587)
T ss_dssp EEEESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSC
T ss_pred EEEECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCC
T ss_conf 79899998340789999841389778986767559999852488999999999999968499997565312127518989
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEE
Q ss_conf 99934999999999862599799984656688999799999999872799479985169137865197999939748310
Q 000522 1357 SFSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHC 1436 (1445)
Q Consensus 1357 ~LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~IaHrl~ti~~~D~I~vl~~G~ivE~ 1436 (1445)
+||||||||++||||++++|+|++||||||++|+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.
T Consensus 479 ~LSgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~ 558 (587)
T 3qf4_A 479 NFSGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGF 558 (587)
T ss_dssp SSCHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEE
T ss_conf 92999999999999997299999997975447999999999999986799989998227688981998999989989997
Q ss_pred CCCCC
Q ss_conf 27999
Q 000522 1437 GCAAA 1441 (1445)
Q Consensus 1437 g~p~~ 1441 (1445)
|+|.+
T Consensus 559 g~~~e 563 (587)
T 3qf4_A 559 GTHKE 563 (587)
T ss_dssp ECHHH
T ss_pred CCHHH
T ss_conf 88999
No 7
>3b60_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; HET: ANP; 3.70A {Salmonella typhimurium} SCOP: c.37.1.12 f.37.1.1 PDB: 3b5y_A* 3b5z_A* 3b5w_A
Probab=1.00 E-value=1 Score=649.46 Aligned_cols=544 Identities=23% Similarity=0.301 Sum_probs=449.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 899874122789999999999999998435667664211457878876514789-9999999999999999999999999
Q 000522 889 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYL-VVLCIFCMFNSFLTLVRAFSFAFGS 967 (1445)
Q Consensus 889 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l-~~~~~l~~~~~~~~~~~~~~~~~~~ 967 (1445)
+..|++...+.+.. .+++.++........++++.++++..... .......++ ..++++.++..++..+..+.....+
T Consensus 16 l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (582)
T 3b60_A 16 LWPTIAPFKAGLIV-AGIALILNAASDTFMLSLLKPLLDDGFGK-TDRSVLLWMPLVVIGLMILRGITSYISSYCISWVS 93 (582)
T ss_dssp HHHHHGGGHHHHHH-HHHHHHHHHHHHHHHHHHHTHHHHSSTTS-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999-99999999999999999999999988436-86579999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999998854964443567733799999812978753357999999999986788664698787899999999
Q 000522 968 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1047 (1445)
Q Consensus 968 ~~~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~~~~~~p 1047 (1445)
.+...+++.++++++++.|+.||++.++|+++||+++|++.++..+...+..++..++.+++.++++.+..|+++++.+.
T Consensus 94 ~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~ 173 (582)
T 3b60_A 94 GKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVV 173 (582)
T ss_dssp HHHHHHHHHHHHHHHHTCCSTHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999980999997889865899999987999999999999999999999999999999980999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998752061375799843338999850938999999999999999989999999856899
Q 000522 1048 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1127 (1445)
Q Consensus 1048 l~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~etl~Gl~tIRaf~~e~~~~~~~~~~ld~~~~~~~~~~~~~~wl~~ 1127 (1445)
...++..+..++.+..++..+......+++.+++.|+++|+.+||+|++|+.+.+++.+..+...+........+.|...
T Consensus 174 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (582)
T 3b60_A 174 LAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDP 253 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999619999983768999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999999999984158887776209999999999999999999999999999998789999998413870000
Q 000522 1128 RLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEEL 1207 (1445)
Q Consensus 1128 ~l~~i~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~ 1207 (1445)
..+++..+...++..+.. . ....+..+.|.+..++.++..+..++..+...+.++.....+++|+.++.+.++|..
T Consensus 254 ~~~~~~~~~~~~~~~~g~---~-~v~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~ 329 (582)
T 3b60_A 254 IIQLIASLALAFVLYAAS---F-PSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKD 329 (582)
T ss_dssp HHHHHHHHHHHHHHHHHH---S-SSTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCC
T ss_pred HHHHHHHHHHHHHHHHHH---H-HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 999999999999999999---9-998499989999999999999999999999999999999999999999975998766
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
Q ss_conf 16789999999876299999999847999963200139985893999987999988899998834798987379997961
Q 000522 1208 CGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN 1287 (1445)
Q Consensus 1208 ~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IdG~d 1287 (1445)
. .+.+.++..|.|+++||+++|+++.+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|
T Consensus 330 ~---~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~v~~~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~~g~~ 406 (582)
T 3b60_A 330 E---GKRVIDRATGDLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHD 406 (582)
T ss_dssp C---CCBCCSCCCCCEEEEEEEECSSSSSCCSEEEEEEEECTTCEEEEEECTTSSHHHHHHHHTTTTCCSEEEEEETTEE
T ss_pred C---CCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCEE
T ss_conf 7---7777778888479998899739999744156159976999899989999989999999861068989769799998
Q ss_pred CCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCHHHHHHHC--CCCHHHHCCCCCCCHHHH
Q ss_conf 79999275612418882777656754787239799--99927799999981389999958--994055149999993499
Q 000522 1288 IINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQR 1363 (1445)
Q Consensus 1288 i~~i~~~~lR~~i~~IpQdp~lF~gTIR~NLdp~~--~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LS~GQr 1363 (1445)
+++++.+++|++++++||+|.+|++|+|||+.++. ..++++++++++.+++.++++.+ |+|+.+++.|.+||||||
T Consensus 407 ~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p~g~~~~~~~~~~~LSgGq~ 486 (582)
T 3b60_A 407 LREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNGLDTIIGENGVLLSGGQR 486 (582)
T ss_dssp TTTBCHHHHHHTEEEECSSCCCCSSBHHHHHHTTTTSCCCHHHHHHHHHTTTCHHHHHHSTTGGGSBCCTTSCSSCHHHH
T ss_pred CCCCCHHHHHHHCEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCCHHHH
T ss_conf 23069999996080880687477878999985459999899999999998497999984504114511479887899999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCCCC
Q ss_conf 999999986259979998465668899979999999987279947998516913786519799993974831027999
Q 000522 1364 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAA 1441 (1445)
Q Consensus 1364 Qll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~IaHrl~ti~~~D~I~vl~~G~ivE~g~p~~ 1441 (1445)
||++||||++++|+|++||||||++|+++++.+++.|++..+++|+|+|+||++++..||+|++|++|+++|.|+|.+
T Consensus 487 qrl~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~ 564 (582)
T 3b60_A 487 QRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSE 564 (582)
T ss_dssp HHHHHHHHHHHCCSEEEEETTTSSCCHHHHHHHHHHHHHHHTTSEEEEECSCGGGTTTCSEEEEEETTEEEEEECHHH
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHH
T ss_conf 999999999728998999786555798999999999999967997999945477898599899997888988458999
No 8
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=649.20 Aligned_cols=546 Identities=22% Similarity=0.335 Sum_probs=403.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC--CCH-----HHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89987412278999999999999999843566766421145787887--651-----47899999999999999999999
Q 000522 889 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTK--YST-----SFYLVVLCIFCMFNSFLTLVRAF 961 (1445)
Q Consensus 889 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~--~~~-----~~~l~~~~~l~~~~~~~~~~~~~ 961 (1445)
+..|++...+.....+ ++.++..+.....++.+++.++........ ... ..+..++.++.++..++..+..+
T Consensus 5 l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (578)
T 4a82_A 5 YLQFVKPYKYRIFATI-IVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQY 83 (578)
T ss_dssp HHHHHGGGHHHHHHHH-HHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999889999999999-999999999999999999999999816871146778888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998854964443567733799999812978753357999999999986788664698787899
Q 000522 962 SFAFGSLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFF 1041 (1445)
Q Consensus 962 ~~~~~~~~~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~ 1041 (1445)
...+.+.+...+++.++++++++.|+.||+++++|+++||+++|++.+++.+...+..++...+..++.++++.+..|++
T Consensus 84 ~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 163 (578)
T 4a82_A 84 LAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKL 163 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999987899997689869999999999999999999999999999999999999999996999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999998752061375799843338999850938999999999999999989999999
Q 000522 1042 LLLLVPFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTA 1121 (1445)
Q Consensus 1042 ~~~~~pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~etl~Gl~tIRaf~~e~~~~~~~~~~ld~~~~~~~~~~~~ 1121 (1445)
.++.+....++..+..++.+..++..+......+++.+++.|+++|+.+||+|++|+.+.+++.+..+...+........
T Consensus 164 ~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (578)
T 4a82_A 164 TLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRW 243 (578)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998249999981664999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8568999999999999999999-998415888777620999999999999999999999999999999878999999841
Q 000522 1122 SLWLSLRLQLLAAFIISFIATM-AVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYM 1200 (1445)
Q Consensus 1122 ~~wl~~~l~~i~~~~~~~~~~~-~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~ 1200 (1445)
..+.....+.+..+...++... +.... .+..++|.+..++.+...+..++..+...+.++.....+.+|+.++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~v~~~g~~~v~-----~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l 318 (578)
T 4a82_A 244 NAYSFAAINTVTDIGPIIVIGVGAYLAI-----SGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLI 318 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999998-----59958999999999999999999999999999999999999999997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 38700001678999999987629999999984799996320013998589399998799998889999883479898737
Q 000522 1201 DVPQEELCGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQ 1280 (1445)
Q Consensus 1201 ~~~~E~~~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~ 1280 (1445)
+.++|.... ..+.+.++..|.|+++||+++|+++.+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+
T Consensus 319 ~~~~~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~ 397 (578)
T 4a82_A 319 DEDYDIKNG-VGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQ 397 (578)
T ss_dssp TCCCSSCCC-TTCCCCCCCSCCEEEEEEEECSCSSSCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEE
T ss_pred CCCCCCCCC-CCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE
T ss_conf 689766678-7766667778807999999975899974134337998799999998999985999999984678899967
Q ss_pred EEECCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC-CCCHHHHHHHHHHCCHHHHHHHC--CCCHHHHCCCCC
Q ss_conf 999796179999275612418882777656754787239799-99927799999981389999958--994055149999
Q 000522 1281 ILVDGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH-MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGIS 1357 (1445)
Q Consensus 1281 I~IdG~di~~i~~~~lR~~i~~IpQdp~lF~gTIR~NLdp~~-~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~ 1357 (1445)
|.+||.|+++++.+++|++++++||+|.+|++|+|||+..+. ..++++++++++.+++.++++.+ |+|+.++|+|.+
T Consensus 398 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~ 477 (578)
T 4a82_A 398 ILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVK 477 (578)
T ss_dssp EEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTT
T ss_pred EEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCC
T ss_conf 99999984427899996006899289834764599998527999889999999988095999975733010253068896
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEEC
Q ss_conf 99349999999998625997999846566889997999999998727994799851691378651979999397483102
Q 000522 1358 FSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1358 LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~IaHrl~ti~~~D~I~vl~~G~ivE~g 1437 (1445)
||||||||++||||++++|+|++||||||++|+++++.+++.+++..+++|+|+||||++++..||+|++|++|+++|.|
T Consensus 478 LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 557 (578)
T 4a82_A 478 LSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557 (578)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 79999999999999974999999978654579999999999999980899799983178999719989999899899988
Q ss_pred CCCC
Q ss_conf 7999
Q 000522 1438 CAAA 1441 (1445)
Q Consensus 1438 ~p~~ 1441 (1445)
+|.+
T Consensus 558 ~~~e 561 (578)
T 4a82_A 558 THRE 561 (578)
T ss_dssp CHHH
T ss_pred CHHH
T ss_conf 8999
No 9
>3b5x_A Lipid A export ATP-binding/permease protein MSBA; ABC transporter, lipid flippase, hydrolase, inner membrane, lipid transport, membrane; 5.50A {Vibrio cholerae}
Probab=1.00 E-value=1 Score=645.39 Aligned_cols=545 Identities=23% Similarity=0.323 Sum_probs=448.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8998741227899999999999999984356676642114578788765147899-999999999999999999999999
Q 000522 889 YKNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQTKYSTSFYLV-VLCIFCMFNSFLTLVRAFSFAFGS 967 (1445)
Q Consensus 889 y~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~~~~~~~~l~-~~~~l~~~~~~~~~~~~~~~~~~~ 967 (1445)
+..|++...+.+.. .+++.++..+.....++++.++++..... .......++. .++++.++..++.....+.....+
T Consensus 16 l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (582)
T 3b5x_A 16 LWTYIRLYKAGLVV-STIALVINAAADTYMISLLKPLLDEGFGN-AESNFLRILPFMILGLMFVRGLSGFASSYCLSWVS 93 (582)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99998899999999-99999999999999999999999998646-86679999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999998854964443567733799999812978753357999999999986788664698787899999999
Q 000522 968 LRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLVP 1047 (1445)
Q Consensus 968 ~~~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~~~~~~p 1047 (1445)
.+...+++.++++++++.|+.||++.+.|++++|+++|++.+++.+...+..++..++.+++.++++.+..|+++++.+.
T Consensus 94 ~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~l~~rl~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l~ 173 (582)
T 3b5x_A 94 GNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDSEQVAGATSRALVSIVREGASIIGLLTLMFWNSWQLSLVLIV 173 (582)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999986999997789878999999988999999999999999999999999999999982999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999998752061375799843338999850938999999999999999989999999856899
Q 000522 1048 FWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLSL 1127 (1445)
Q Consensus 1048 l~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~etl~Gl~tIRaf~~e~~~~~~~~~~ld~~~~~~~~~~~~~~wl~~ 1127 (1445)
...++..+..++.+..++..+......+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+........+.|...
T Consensus 174 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (582)
T 3b5x_A 174 VAPVVAFAISFVSKRFRKISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIADP 253 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999519999970875999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 99999999999999999984158887776209999999999999999999999999999998789999998413870000
Q 000522 1128 RLQLLAAFIISFIATMAVIGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQEEL 1207 (1445)
Q Consensus 1128 ~l~~i~~~~~~~~~~~~v~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E~~ 1207 (1445)
..+++..+...++..+..... ..+..+.|.+...+.+...+..++..+...+.++.....+.+|+.++.+.++|..
T Consensus 254 ~~~~~~~~~~~~i~~~g~~~v----~~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~ 329 (582)
T 3b5x_A 254 VIQMIASLALFAVLFLASVDS----IRAELTPGTFTVVFSAMFGLMRPLKALTSVTSEFQRGMAACQTLFGLMDLETERD 329 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 999999999999999999999----8599889999999999999999999999999999999999999999975897677
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
Q ss_conf 16789999999876299999999847999963200139985893999987999988899998834798987379997961
Q 000522 1208 CGYQSLSPDWPFQGLIEFQNVTMRYKPSLPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILVDGLN 1287 (1445)
Q Consensus 1208 ~~~~~~~~~wp~~g~I~f~nvs~~Y~~~~~~vL~~isl~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~IdG~d 1287 (1445)
.+ +.+.++..|.|+++||+++|+++.+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.|
T Consensus 330 ~~---~~~~~~~~~~i~~~~v~~~y~~~~~~~l~~i~l~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~g~~ 406 (582)
T 3b5x_A 330 NG---KYEAERVNGEVDVKDVTFTYQGKEKPALSHVSFSIPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHD 406 (582)
T ss_pred CC---CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEE
T ss_conf 77---777777888289999899728998654004169987999899989999979999999965778999879899998
Q ss_pred CCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCC--CCCHHHHHHHHHHCCHHHHHHHC--CCCHHHHCCCCCCCHHHH
Q ss_conf 79999275612418882777656754787239799--99927799999981389999958--994055149999993499
Q 000522 1288 IINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFH--MNDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGISFSVGQR 1363 (1445)
Q Consensus 1288 i~~i~~~~lR~~i~~IpQdp~lF~gTIR~NLdp~~--~~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~LS~GQr 1363 (1445)
+.+.+.+++|++++++||+|.+|++|+|||+..+. ..++++++++++.+++.++++.+ |+|+.++++|.+||||||
T Consensus 407 ~~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~g~~t~~~~~~~~LSgGq~ 486 (582)
T 3b5x_A 407 VRDYKLTNLRRHFALVSQNVHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQR 486 (582)
T ss_pred HHHCCHHHHHCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHCCCCCCCCHHHH
T ss_conf 56388999964858982799053102999985668899999999999998798999984765334510688884799999
Q ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCCCCC
Q ss_conf 9999999862599799984656688999799999999872799479985169137865197999939748310279999
Q 000522 1364 QLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCGCAAAP 1442 (1445)
Q Consensus 1364 Qll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~IaHrl~ti~~~D~I~vl~~G~ivE~g~p~~~ 1442 (1445)
||++||||++++|+|++||||||++|+++++.+++.|++..+++|+|+|+||++++..||+|++|++|+++|.|+|.+.
T Consensus 487 qr~~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l 565 (582)
T 3b5x_A 487 QRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQADEILVVDEGEIIERGRHADL 565 (582)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 9999999997499999997854468999999999999997289989999368899981998999989989997789999
No 10
>2yl4_A ATP-binding cassette SUB-family B member 10, mitochondrial; membrane protein, mitochondrial transport; HET: ACP LMT CDL 14Y; 2.85A {Homo sapiens} PDB: 4aa3_A*
Probab=1.00 E-value=1 Score=635.36 Aligned_cols=546 Identities=23% Similarity=0.269 Sum_probs=433.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC-CC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 998741227899999999999999984356676642114578788-76--514789999999999999999999999999
Q 000522 890 KNYAKFSGWFITLVICLSAILMQASRNGNDLWLSYWVDTTGSSQT-KY--STSFYLVVLCIFCMFNSFLTLVRAFSFAFG 966 (1445)
Q Consensus 890 ~~y~~~~g~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~~~-~~--~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~ 966 (1445)
..|++...+.+... +++.++........+++++++++....... .. ....++.+++++.++..++...+.+.....
T Consensus 11 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (595)
T 2yl4_A 11 LGLAYPERRRLAAA-VGFLTMSSVISMSAPFFLGKIIDVIYTNPTVDYSDNLTRLCLGLSAVFLCGAAANAIRVYLMQTS 89 (595)
T ss_dssp HHHHGGGHHHHHHH-HHHHHHHHHHHTTHHHHHHHHHHHHHHCTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99988789999999-99999999999999999999999997357402667999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999885496444356773379999981297875335799999999998678866469878789999999
Q 000522 967 SLRAAVKVHNTLLTKIVNAPVLFFDQTPGGRILNRFSSDLYMIDDSLPFILNILLANFVGLLGIAVVLSYVQVFFLLLLV 1046 (1445)
Q Consensus 967 ~~~~s~~lh~~ll~~il~~p~~ff~~~~~G~ilnRfs~D~~~id~~l~~~l~~~~~~~~~~i~~~~~i~~~~~~~~~~~~ 1046 (1445)
+.+...+++.++++++++.|+.||+..++|+++||+++|++.++..+...+..++..++..++.++++.+..|+++++++
T Consensus 90 ~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~l~~r~~~d~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l~li~l 169 (595)
T 2yl4_A 90 GQRIVNRLRTSLFSSILRQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGISMMFFVSPNLATFVL 169 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHSCHHHHHHSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998199999777984889999999999999999999999999999999999999998199999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999875206137579984333899985093899999999999999998999999985689
Q 000522 1047 PFWFIYSKLQFFYRSTSRELRRLDSVSRSPIYASFTETLNGSSTIRAFKSEDYFMAKFKEHVVLYQRTSYSELTASLWLS 1126 (1445)
Q Consensus 1047 pl~~~~~~i~~~y~~~sr~l~rl~~~~~spl~~~~~etl~Gl~tIRaf~~e~~~~~~~~~~ld~~~~~~~~~~~~~~wl~ 1126 (1445)
....++..+...+.+..+...+......+.+.+++.|+++|+.+||+|++|+.+.+++.+..+...+........+.|..
T Consensus 170 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (595)
T 2yl4_A 170 SVVPPVSIIAVIYGRYLRKLTKVTQDSLAQATQLAEERIGNVRTVRAFGKEMTEIEKYASKVDHVMQLARKEAFARAGFF 249 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999811999998375699999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 9999999999999999999-841588877762099999999999999999999999999999987899999984138700
Q 000522 1127 LRLQLLAAFIISFIATMAV-IGSRGNLPATFSTPGLVGLALSYAAPIVSLLGNFLSSFTETEKEMVSLERVLEYMDVPQE 1205 (1445)
Q Consensus 1127 ~~l~~i~~~~~~~~~~~~v-~~~~~~~~~~~~~~g~vgl~l~~~~~~~~~l~~l~~~~~~~e~~~~sveRi~~~~~~~~E 1205 (1445)
...+++..+...++..+.. ... .+..+.|.+..++.++..+..++..+...+.++.....+++|+.++.+.++|
T Consensus 250 ~~~~~~~~~~~~~~~~~g~~~v~-----~g~lt~g~l~~~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~ 324 (595)
T 2yl4_A 250 GATGLSGNLIVLSVLYKGGLLMG-----SAHMTVGELSSFLMYAFWVGISIGGLSSFYSELMKGLGAGGRLWELLEREPK 324 (595)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-----TTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999998-----6997899999999999999999999999999999999999999999838976
Q ss_pred CCCCCCCCCCCCCCCCC-EEEEEEEEEECCC-CCCCCEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
Q ss_conf 00167899999998762-9999999984799-996320013998589399998799998889999883479898737999
Q 000522 1206 ELCGYQSLSPDWPFQGL-IEFQNVTMRYKPS-LPAALHDINFTIEGGTQVGIVGRTGAGKSSILNALFRLTPICGGQILV 1283 (1445)
Q Consensus 1206 ~~~~~~~~~~~wp~~g~-I~f~nvs~~Y~~~-~~~vL~~isl~I~~GekvgIvGrTGSGKSTL~~~L~rl~~~~~G~I~I 1283 (1445)
.......+ +..+..|. |+++||+++|+++ ..++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+
T Consensus 325 ~~~~~~~~-~~~~~~~~~i~~~~v~~~y~~~~~~~vl~~isl~i~~G~~~~ivG~sGsGKSTLl~~l~g~~~p~~G~i~~ 403 (595)
T 2yl4_A 325 LPFNEGVI-LNEKSFQGALEFKNVHFAYPARPEVPIFQDFSLSIPSGSVTALVGPSGSGKSTVLSLLLRLYDPASGTISL 403 (595)
T ss_dssp SCSSCSBC-CCTTTCCCCEEEEEEEEECSSCTTSEEEEEEEEEECTTCEEEEECCTTSSSTHHHHHHTTSSCCSEEEEEE
T ss_pred CCCCCCCC-CCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEE
T ss_conf 67777877-77678998389998899858998881201127998499889998999997999999982585789837999
Q ss_pred CCEECCCCCHHHHHCCEEEECCCCCCCCCCHHHHCCCCCC----CCHHHHHHHHHHCCHHHHHHHC--CCCHHHHCCCCC
Q ss_conf 7961799992756124188827776567547872397999----9927799999981389999958--994055149999
Q 000522 1284 DGLNIINTPVRDLRGRFAVVPQSPFLFEGSLRDNLDPFHM----NDDLKIWSVLEKCHVKEEVEAV--GLETFVKESGIS 1357 (1445)
Q Consensus 1284 dG~di~~i~~~~lR~~i~~IpQdp~lF~gTIR~NLdp~~~----~sd~ei~~aL~~~~l~~~i~~l--gLdt~v~e~G~~ 1357 (1445)
||.|+.+++.+++|++++++||+|.+|++|+|||+..+.. .++++++++++.+++.++++.+ |+|+.++++|.+
T Consensus 404 ~g~~i~~~~~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~g~~~~~~~~~~~ 483 (595)
T 2yl4_A 404 DGHDIRQLNPVWLRSKIGTVSQEPILFSCSIAENIAYGADDPSSVTAEEIQRVAEVANAVAFIRNFPQGFNTVVGEKGVL 483 (595)
T ss_dssp TTEETTTBCHHHHHHSEEEECSSCCCCSSBHHHHHHTTSSSTTTSCHHHHHHHHHHTTCHHHHHTSSSGGGCBCSSSSCC
T ss_pred CCEEHHHCCHHHHHHCEEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCC
T ss_conf 99981117999997322898368832687799998405877665689999999998697999974732013501688786
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEEC
Q ss_conf 99349999999998625997999846566889997999999998727994799851691378651979999397483102
Q 000522 1358 FSVGQRQLICLARALLKSSKVLCLDECTANVDAQTASILQNAISSECKGMTVITIAHRISTVLNMDEILILDHGHLPHCG 1437 (1445)
Q Consensus 1358 LS~GQrQll~LARAlLr~~~ILiLDEaTS~lD~~T~~~Iq~~I~~~f~~~TvI~IaHrl~ti~~~D~I~vl~~G~ivE~g 1437 (1445)
||||||||++||||++++|+|++||||||++|+++++.+++.|++..+++|+|+|+||++++..||+|++|++|+++|.|
T Consensus 484 LSgGq~qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~~~g 563 (595)
T 2yl4_A 484 LSGGQKQRIAIARALLKNPKILLLDEATSALDAENEYLVQEALDRLMDGRTVLVIAHRLSTIKNANMVAVLDQGKITEYG 563 (595)
T ss_dssp CCHHHHHHHHHHHHHHHCCSEEEEECCCSSCCHHHHHHHHHHHHHHHTTSEEEEECCCHHHHHHSSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 89999999999999975999999988666899899999999999996599799994687899759989999899899978
Q ss_pred CCCCC
Q ss_conf 79999
Q 000522 1438 CAAAP 1442 (1445)
Q Consensus 1438 ~p~~~ 1442 (1445)
+|.+.
T Consensus 564 ~~~~l 568 (595)
T 2yl4_A 564 KHEEL 568 (595)
T ss_dssp CSCC-
T ss_pred CHHHH
T ss_conf 89999
Done!