Query 000523
Match_columns 1445
No_of_seqs 835 out of 5370
Neff 7.6
Searched_HMMs 46136
Date Mon Apr 1 17:56:07 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000523.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000523hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 7E-256 1E-260 2360.6 96.0 1340 36-1445 12-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 2E-238 5E-243 2368.5 142.3 1426 18-1445 18-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 1E-186 2E-191 1878.4 134.2 1287 94-1440 3-1389(1394)
4 TIGR00955 3a01204 The Eye Pigm 100.0 7.4E-95 1.6E-99 920.4 59.5 564 871-1445 37-617 (617)
5 KOG0061 Transporter, ABC super 100.0 5.4E-95 1.2E-99 909.7 55.9 576 843-1444 22-611 (613)
6 PLN03211 ABC transporter G-25; 100.0 2.2E-94 4.8E-99 913.9 60.3 582 843-1442 36-659 (659)
7 TIGR00956 3a01205 Pleiotropic 100.0 5.2E-92 1.1E-96 954.7 62.6 562 870-1442 72-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 7.6E-91 1.6E-95 937.8 58.1 592 841-1441 126-789 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 5.2E-86 1.1E-90 829.6 39.6 563 870-1442 126-731 (1391)
10 KOG0061 Transporter, ABC super 100.0 1.8E-79 3.9E-84 769.5 58.0 583 114-775 21-608 (613)
11 PLN03211 ABC transporter G-25; 100.0 1.4E-78 3.1E-83 769.5 63.1 609 114-775 35-658 (659)
12 TIGR00955 3a01204 The Eye Pigm 100.0 9.3E-79 2E-83 773.1 59.3 569 162-774 35-612 (617)
13 KOG0055 Multidrug/pheromone ex 100.0 8.9E-76 1.9E-80 740.4 49.2 836 78-1084 314-1208(1228)
14 KOG0054 Multidrug resistance-a 100.0 1.6E-71 3.6E-76 719.2 53.7 814 78-1084 483-1357(1381)
15 TIGR01257 rim_protein retinal- 100.0 9.2E-70 2E-74 731.2 72.0 224 846-1096 1937-2162(2272)
16 PLN03130 ABC transporter C fam 100.0 3.2E-68 6.9E-73 729.2 59.2 211 845-1084 1236-1456(1622)
17 PLN03232 ABC transporter C fam 100.0 2.2E-67 4.8E-72 721.8 57.1 211 845-1084 1233-1453(1495)
18 PTZ00265 multidrug resistance 100.0 1.2E-66 2.7E-71 707.1 55.4 217 845-1084 1164-1447(1466)
19 TIGR00957 MRP_assoc_pro multi 100.0 1.4E-65 3E-70 705.1 61.2 211 845-1084 1283-1503(1522)
20 COG1123 ATPase components of v 100.0 4.2E-65 9E-70 606.7 50.4 491 118-1084 5-514 (539)
21 PRK13549 xylose transporter AT 100.0 4.6E-64 1E-68 627.8 49.5 457 166-1086 19-491 (506)
22 PRK09700 D-allose transporter 100.0 7.1E-64 1.5E-68 627.2 47.8 457 166-1084 19-493 (510)
23 PRK10762 D-ribose transporter 100.0 9.6E-64 2.1E-68 624.2 48.5 449 166-1086 18-481 (501)
24 PRK10261 glutathione transport 100.0 4E-63 8.8E-68 630.6 53.1 487 165-1084 29-548 (623)
25 TIGR01271 CFTR_protein cystic 100.0 3.3E-62 7.2E-67 669.5 64.0 210 845-1084 1216-1435(1490)
26 PRK15134 microcin C ABC transp 100.0 1E-62 2.2E-67 619.1 52.0 464 165-1084 22-510 (529)
27 TIGR03269 met_CoM_red_A2 methy 100.0 1E-62 2.2E-67 618.2 51.9 444 166-1084 14-512 (520)
28 PRK15439 autoinducer 2 ABC tra 100.0 7.8E-63 1.7E-67 616.3 49.9 452 166-1085 25-488 (510)
29 PTZ00243 ABC transporter; Prov 100.0 3E-62 6.6E-67 669.7 58.0 211 845-1084 1307-1528(1560)
30 TIGR02633 xylG D-xylose ABC tr 100.0 1.7E-62 3.8E-67 613.6 49.4 457 166-1085 15-488 (500)
31 PRK11288 araG L-arabinose tran 100.0 2E-62 4.3E-67 612.4 49.5 451 166-1087 18-483 (501)
32 PRK10982 galactose/methyl gala 100.0 4.4E-61 9.5E-66 599.3 46.1 450 165-1085 11-476 (491)
33 PRK10938 putative molybdenum t 100.0 3.1E-60 6.6E-65 592.0 44.2 214 846-1081 260-484 (490)
34 PRK11819 putative ABC transpor 100.0 9.3E-58 2E-62 575.9 57.8 201 846-1083 324-527 (556)
35 COG4172 ABC-type uncharacteriz 100.0 7.6E-58 1.6E-62 509.6 45.2 470 163-1084 21-511 (534)
36 PRK15064 ABC transporter ATP-b 100.0 4.4E-58 9.6E-63 577.1 48.6 198 846-1084 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 4.6E-57 9.9E-62 569.7 57.5 201 846-1083 322-525 (552)
38 PRK10636 putative ABC transpor 100.0 5.4E-55 1.2E-59 556.2 54.2 197 846-1084 312-512 (638)
39 PRK11147 ABC transporter ATPas 100.0 6.7E-55 1.5E-59 557.0 51.6 202 846-1084 319-523 (635)
40 PRK13409 putative ATPase RIL; 100.0 7.7E-55 1.7E-59 546.5 41.4 211 846-1098 340-554 (590)
41 COG1129 MglA ABC-type sugar tr 100.0 6.8E-54 1.5E-58 508.0 43.5 449 163-1081 19-482 (500)
42 PLN03073 ABC transporter F fam 100.0 9.2E-53 2E-57 536.1 47.3 200 846-1084 508-709 (718)
43 COG0488 Uup ATPase components 100.0 1.4E-52 3.1E-57 511.5 46.5 218 165-412 16-238 (530)
44 COG3845 ABC-type uncharacteriz 100.0 8.7E-50 1.9E-54 461.5 39.9 457 164-1085 16-488 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 1.1E-43 2.4E-48 371.0 21.5 220 164-435 14-238 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 2.4E-43 5.2E-48 368.5 22.8 214 847-1084 3-220 (240)
47 KOG0927 Predicted transporter 100.0 1.2E-42 2.7E-47 402.2 30.9 203 844-1084 387-591 (614)
48 COG1135 AbcC ABC-type metal io 100.0 1.2E-41 2.5E-46 373.2 21.8 224 163-437 17-246 (339)
49 COG1131 CcmA ABC-type multidru 100.0 3.3E-41 7.1E-46 389.6 25.3 223 847-1097 5-230 (293)
50 COG1125 OpuBA ABC-type proline 100.0 1.9E-41 4.1E-46 360.1 20.3 210 164-414 13-225 (309)
51 KOG0058 Peptide exporter, ABC 100.0 7.8E-42 1.7E-46 411.7 18.1 255 78-414 431-691 (716)
52 COG1120 FepC ABC-type cobalami 100.0 3.3E-41 7.2E-46 372.3 19.4 210 165-413 15-227 (258)
53 COG1135 AbcC ABC-type metal io 100.0 7.1E-41 1.5E-45 367.0 21.1 218 847-1084 2-226 (339)
54 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.4E-40 3E-45 365.2 23.4 217 846-1086 4-224 (254)
55 COG1127 Ttg2A ABC-type transpo 100.0 1.1E-40 2.3E-45 354.0 21.6 231 846-1100 8-250 (263)
56 TIGR01257 rim_protein retinal- 100.0 4.5E-36 9.7E-41 406.2 71.7 216 845-1084 927-1144(2272)
57 COG3839 MalK ABC-type sugar tr 100.0 1.2E-40 2.6E-45 381.5 23.2 217 167-434 18-235 (338)
58 COG1120 FepC ABC-type cobalami 100.0 1.2E-40 2.6E-45 368.0 21.0 218 846-1085 2-224 (258)
59 COG3842 PotA ABC-type spermidi 100.0 1.4E-40 3E-45 383.0 22.2 223 165-437 18-241 (352)
60 COG1116 TauB ABC-type nitrate/ 100.0 2.8E-40 6.2E-45 357.2 22.1 204 846-1075 3-207 (248)
61 COG1116 TauB ABC-type nitrate/ 100.0 5.2E-40 1.1E-44 355.2 22.2 194 165-403 16-211 (248)
62 COG1127 Ttg2A ABC-type transpo 100.0 6.1E-40 1.3E-44 348.2 22.2 209 165-414 21-235 (263)
63 COG1125 OpuBA ABC-type proline 100.0 3.2E-40 7E-45 350.7 19.5 213 847-1084 2-220 (309)
64 COG1136 SalX ABC-type antimicr 100.0 9.4E-40 2E-44 354.0 23.4 193 872-1076 18-219 (226)
65 COG3638 ABC-type phosphate/pho 100.0 3.7E-40 8E-45 349.0 19.1 220 846-1086 3-234 (258)
66 COG1118 CysA ABC-type sulfate/ 100.0 4.3E-40 9.3E-45 359.7 19.2 224 164-436 14-241 (345)
67 COG1131 CcmA ABC-type multidru 100.0 9.8E-40 2.1E-44 377.3 23.1 212 164-418 17-230 (293)
68 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.2E-39 4.8E-44 355.8 22.3 208 166-414 18-227 (254)
69 COG2274 SunT ABC-type bacterio 100.0 6.1E-40 1.3E-44 413.0 20.4 258 78-414 436-696 (709)
70 COG1118 CysA ABC-type sulfate/ 100.0 1.6E-39 3.4E-44 355.3 19.1 205 871-1085 14-223 (345)
71 COG4555 NatA ABC-type Na+ tran 100.0 8.3E-40 1.8E-44 336.3 15.8 200 873-1084 16-217 (245)
72 COG1117 PstB ABC-type phosphat 100.0 1.8E-39 3.8E-44 337.3 18.3 220 166-433 21-248 (253)
73 COG3638 ABC-type phosphate/pho 100.0 5.4E-39 1.2E-43 340.1 21.0 215 165-414 17-237 (258)
74 COG4555 NatA ABC-type Na+ tran 100.0 2.4E-39 5.1E-44 333.0 16.4 206 165-414 15-222 (245)
75 COG2884 FtsE Predicted ATPase 100.0 7.8E-39 1.7E-43 326.9 19.3 213 847-1084 2-221 (223)
76 KOG0057 Mitochondrial Fe/S clu 100.0 7.8E-39 1.7E-43 372.7 20.8 229 110-414 343-574 (591)
77 COG3839 MalK ABC-type sugar tr 100.0 1.7E-38 3.7E-43 363.8 22.2 214 846-1084 3-218 (338)
78 PRK13537 nodulation ABC transp 100.0 5.6E-38 1.2E-42 366.3 26.8 214 846-1084 7-222 (306)
79 COG1117 PstB ABC-type phosphat 100.0 1.5E-38 3.2E-43 330.5 19.1 217 846-1084 7-232 (253)
80 KOG0056 Heavy metal exporter H 100.0 2E-39 4.3E-44 367.0 13.5 257 78-414 502-761 (790)
81 TIGR02314 ABC_MetN D-methionin 100.0 7.6E-38 1.7E-42 367.8 26.9 206 165-413 18-229 (343)
82 COG1136 SalX ABC-type antimicr 100.0 3.6E-38 7.8E-43 341.7 22.1 196 165-403 18-220 (226)
83 KOG0055 Multidrug/pheromone ex 100.0 1E-38 2.2E-43 404.9 20.2 258 78-414 951-1213(1228)
84 TIGR03265 PhnT2 putative 2-ami 100.0 1.2E-37 2.6E-42 368.9 26.1 206 166-414 18-224 (353)
85 PRK11650 ugpC glycerol-3-phosp 100.0 1.2E-37 2.7E-42 369.1 26.0 205 166-413 18-223 (356)
86 PRK11432 fbpC ferric transport 100.0 1.4E-37 3.1E-42 367.4 26.4 205 166-413 20-225 (351)
87 COG3842 PotA ABC-type spermidi 100.0 3.4E-38 7.4E-43 363.2 20.4 215 846-1084 5-221 (352)
88 TIGR03258 PhnT 2-aminoethylpho 100.0 1.8E-37 3.9E-42 367.6 26.6 207 166-414 19-228 (362)
89 TIGR02314 ABC_MetN D-methionin 100.0 2.3E-37 4.9E-42 363.8 26.3 217 847-1084 2-225 (343)
90 PRK13537 nodulation ABC transp 100.0 2.7E-37 5.8E-42 360.6 26.5 205 166-414 21-227 (306)
91 cd03261 ABC_Org_Solvent_Resist 100.0 2.9E-37 6.2E-42 348.7 25.5 213 848-1084 2-221 (235)
92 COG1124 DppF ABC-type dipeptid 100.0 1.6E-37 3.5E-42 332.1 21.1 205 166-414 21-231 (252)
93 PRK09452 potA putrescine/sperm 100.0 3.6E-37 7.7E-42 366.4 26.2 205 166-413 28-233 (375)
94 TIGR03265 PhnT2 putative 2-ami 100.0 4.5E-37 9.7E-42 363.9 26.2 214 846-1084 4-219 (353)
95 PRK11650 ugpC glycerol-3-phosp 100.0 4.5E-37 9.7E-42 364.4 25.9 214 847-1084 4-219 (356)
96 COG1132 MdlB ABC-type multidru 100.0 1.2E-37 2.5E-42 395.8 21.6 255 78-414 295-552 (567)
97 cd03261 ABC_Org_Solvent_Resist 100.0 5.3E-37 1.2E-41 346.5 24.6 206 166-413 14-225 (235)
98 COG1122 CbiO ABC-type cobalt t 100.0 2.8E-37 6.1E-42 342.0 21.7 207 165-414 17-228 (235)
99 PRK11432 fbpC ferric transport 100.0 6.9E-37 1.5E-41 361.7 26.2 214 846-1084 6-221 (351)
100 PRK11174 cysteine/glutathione 100.0 2.4E-37 5.3E-42 395.1 24.2 255 78-414 314-572 (588)
101 PRK13536 nodulation factor exp 100.0 8.1E-37 1.7E-41 360.0 26.6 214 846-1084 41-256 (340)
102 TIGR01186 proV glycine betaine 100.0 5.6E-37 1.2E-41 362.2 25.0 208 164-414 5-219 (363)
103 PRK10851 sulfate/thiosulfate t 100.0 8.5E-37 1.8E-41 361.6 26.3 209 166-413 16-225 (353)
104 TIGR03258 PhnT 2-aminoethylpho 100.0 9.2E-37 2E-41 361.6 26.2 214 846-1084 5-223 (362)
105 COG2884 FtsE Predicted ATPase 100.0 2.8E-37 6E-42 315.5 18.2 200 165-408 15-220 (223)
106 cd03259 ABC_Carb_Solutes_like 100.0 1E-36 2.2E-41 339.0 24.4 210 848-1082 2-213 (213)
107 COG3840 ThiQ ABC-type thiamine 100.0 2.3E-37 5E-42 313.0 17.0 201 170-413 17-218 (231)
108 PRK11607 potG putrescine trans 100.0 1.6E-36 3.4E-41 361.6 27.1 205 166-413 33-238 (377)
109 COG0410 LivF ABC-type branched 100.0 8.7E-37 1.9E-41 324.4 22.0 206 165-414 16-226 (237)
110 COG1122 CbiO ABC-type cobalt t 100.0 5.9E-37 1.3E-41 339.5 21.7 214 847-1084 4-223 (235)
111 TIGR01188 drrA daunorubicin re 100.0 9.1E-37 2E-41 356.5 24.3 201 872-1084 6-208 (302)
112 COG3840 ThiQ ABC-type thiamine 100.0 3.8E-37 8.2E-42 311.5 17.7 196 877-1084 17-214 (231)
113 PRK11000 maltose/maltodextrin 100.0 1.7E-36 3.6E-41 362.0 26.5 205 166-413 17-222 (369)
114 PRK10851 sulfate/thiosulfate t 100.0 1.6E-36 3.6E-41 359.2 26.0 216 847-1084 3-221 (353)
115 COG2274 SunT ABC-type bacterio 100.0 2.1E-35 4.5E-40 372.1 37.1 217 840-1084 465-691 (709)
116 cd03269 ABC_putative_ATPase Th 100.0 2.1E-36 4.5E-41 335.7 24.8 209 848-1082 2-210 (210)
117 PRK11153 metN DL-methionine tr 100.0 2.5E-36 5.4E-41 357.7 26.8 206 165-413 18-229 (343)
118 TIGR00960 3a0501s02 Type II (G 100.0 1.8E-36 3.9E-41 337.8 24.0 208 847-1077 2-215 (216)
119 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.9E-36 6.3E-41 337.0 25.6 200 872-1084 17-218 (220)
120 TIGR01288 nodI ATP-binding ABC 100.0 2.5E-36 5.3E-41 353.1 26.0 214 846-1084 4-219 (303)
121 cd03265 ABC_DrrA DrrA is the A 100.0 3E-36 6.5E-41 336.9 25.2 212 848-1084 2-216 (220)
122 PRK13536 nodulation factor exp 100.0 2.1E-36 4.6E-41 356.4 25.2 205 166-414 55-261 (340)
123 PRK09452 potA putrescine/sperm 100.0 2.7E-36 5.9E-41 358.8 26.3 214 846-1084 14-229 (375)
124 cd03301 ABC_MalK_N The N-termi 100.0 3E-36 6.6E-41 335.2 25.0 210 848-1082 2-213 (213)
125 COG1137 YhbG ABC-type (unclass 100.0 2.3E-37 5E-42 318.0 14.6 205 870-1084 15-223 (243)
126 COG0411 LivG ABC-type branched 100.0 4.3E-37 9.4E-42 329.2 17.2 221 163-414 15-239 (250)
127 cd03219 ABC_Mj1267_LivG_branch 100.0 3.3E-36 7.1E-41 340.4 25.4 215 848-1084 2-227 (236)
128 COG1124 DppF ABC-type dipeptid 100.0 1.2E-36 2.5E-41 325.5 20.2 217 846-1085 3-227 (252)
129 PRK13637 cbiO cobalt transport 100.0 4.1E-36 8.8E-41 348.3 26.1 218 165-425 20-248 (287)
130 cd03259 ABC_Carb_Solutes_like 100.0 2.7E-36 5.8E-41 335.6 23.6 199 166-407 14-213 (213)
131 PRK11153 metN DL-methionine tr 100.0 3.9E-36 8.4E-41 356.0 26.3 217 847-1084 2-225 (343)
132 COG4559 ABC-type hemin transpo 100.0 1.2E-36 2.5E-41 315.5 18.7 207 166-414 15-230 (259)
133 cd03218 ABC_YhbG The ABC trans 100.0 4.3E-36 9.3E-41 338.5 25.0 212 848-1084 2-217 (232)
134 cd03296 ABC_CysA_sulfate_impor 100.0 5.8E-36 1.3E-40 338.8 26.1 216 847-1084 3-221 (239)
135 cd03266 ABC_NatA_sodium_export 100.0 3.7E-36 8E-41 335.8 23.9 215 847-1082 2-218 (218)
136 PRK11607 potG putrescine trans 100.0 7E-36 1.5E-40 356.0 27.7 214 846-1084 19-234 (377)
137 PRK11000 maltose/maltodextrin 100.0 4.6E-36 1E-40 358.2 26.2 214 846-1084 3-218 (369)
138 KOG0062 ATPase component of AB 100.0 3.8E-36 8.2E-41 346.7 24.3 204 844-1083 360-563 (582)
139 cd03265 ABC_DrrA DrrA is the A 100.0 4.9E-36 1.1E-40 335.2 24.6 204 166-412 14-219 (220)
140 TIGR01188 drrA daunorubicin re 100.0 2.6E-36 5.6E-41 352.7 23.4 206 165-414 6-213 (302)
141 PRK09536 btuD corrinoid ABC tr 100.0 3.8E-36 8.3E-41 359.2 25.2 217 847-1085 4-224 (402)
142 TIGR01186 proV glycine betaine 100.0 4.4E-36 9.5E-41 354.6 25.2 202 871-1084 5-214 (363)
143 COG4988 CydD ABC-type transpor 100.0 2.1E-36 4.5E-41 359.2 22.4 255 79-414 285-543 (559)
144 COG4987 CydC ABC-type transpor 100.0 9.2E-37 2E-41 355.4 18.8 257 77-414 302-561 (573)
145 cd03296 ABC_CysA_sulfate_impor 100.0 7.4E-36 1.6E-40 338.0 25.7 209 166-413 16-225 (239)
146 TIGR03522 GldA_ABC_ATP gliding 100.0 6.1E-36 1.3E-40 349.2 25.7 212 847-1084 3-216 (301)
147 cd03268 ABC_BcrA_bacitracin_re 100.0 4.6E-36 1E-40 332.4 23.4 206 848-1082 2-208 (208)
148 cd03260 ABC_PstB_phosphate_tra 100.0 5.1E-36 1.1E-40 336.7 23.8 213 848-1084 2-224 (227)
149 cd03234 ABCG_White The White s 100.0 8.7E-36 1.9E-40 334.5 25.6 221 847-1082 4-226 (226)
150 TIGR01288 nodI ATP-binding ABC 100.0 7.3E-36 1.6E-40 349.1 25.9 205 166-414 18-224 (303)
151 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.2E-36 4.8E-41 392.2 23.7 253 78-414 418-673 (686)
152 PRK13634 cbiO cobalt transport 100.0 6.8E-36 1.5E-40 346.9 25.0 218 165-425 20-249 (290)
153 cd03258 ABC_MetN_methionine_tr 100.0 7.4E-36 1.6E-40 336.8 24.6 217 847-1084 2-225 (233)
154 cd03219 ABC_Mj1267_LivG_branch 100.0 7.7E-36 1.7E-40 337.4 24.5 214 166-413 14-231 (236)
155 cd03258 ABC_MetN_methionine_tr 100.0 8.6E-36 1.9E-40 336.3 24.7 205 166-413 19-229 (233)
156 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 6.7E-36 1.5E-40 333.7 23.6 207 848-1075 2-216 (218)
157 cd03256 ABC_PhnC_transporter A 100.0 6.5E-36 1.4E-40 339.1 23.7 204 872-1084 14-229 (241)
158 PRK13643 cbiO cobalt transport 100.0 1.1E-35 2.3E-40 345.0 25.9 223 166-432 20-254 (288)
159 PRK09493 glnQ glutamine ABC tr 100.0 1.3E-35 2.7E-40 336.4 25.7 214 847-1084 2-220 (240)
160 cd03301 ABC_MalK_N The N-termi 100.0 9.4E-36 2E-40 331.3 24.3 199 166-407 14-213 (213)
161 cd03226 ABC_cobalt_CbiO_domain 100.0 4.8E-36 1E-40 331.5 21.4 192 872-1079 13-205 (205)
162 PRK11629 lolD lipoprotein tran 100.0 1.9E-35 4E-40 333.4 26.5 217 846-1084 5-229 (233)
163 PRK11264 putative amino-acid A 100.0 1.5E-35 3.2E-40 337.9 26.0 214 847-1084 4-228 (250)
164 TIGR00960 3a0501s02 Type II (G 100.0 6.2E-36 1.3E-40 333.4 22.2 194 166-403 17-216 (216)
165 cd03263 ABC_subfamily_A The AB 100.0 1.1E-35 2.4E-40 332.5 24.1 213 848-1084 2-216 (220)
166 TIGR02673 FtsE cell division A 100.0 1E-35 2.2E-40 331.3 23.7 206 847-1075 2-213 (214)
167 cd03218 ABC_YhbG The ABC trans 100.0 1.3E-35 2.7E-40 334.8 24.4 204 166-413 14-221 (232)
168 PRK13637 cbiO cobalt transport 100.0 1.4E-35 3E-40 343.9 25.3 218 847-1084 3-229 (287)
169 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.4E-35 3E-40 331.5 24.5 200 165-409 17-218 (220)
170 TIGR03522 GldA_ABC_ATP gliding 100.0 1.8E-35 3.9E-40 345.3 26.1 204 166-414 16-221 (301)
171 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.5E-35 3.2E-40 336.1 24.7 213 848-1084 2-220 (242)
172 TIGR03375 type_I_sec_LssB type 100.0 7E-36 1.5E-40 388.1 24.8 258 78-414 428-688 (694)
173 cd03292 ABC_FtsE_transporter F 100.0 1.4E-35 3E-40 330.2 23.6 194 872-1077 14-213 (214)
174 cd03224 ABC_TM1139_LivF_branch 100.0 1.2E-35 2.7E-40 332.5 23.2 199 872-1084 13-216 (222)
175 PRK13650 cbiO cobalt transport 100.0 2.3E-35 5E-40 340.8 25.8 204 166-413 21-228 (279)
176 COG0410 LivF ABC-type branched 100.0 9.5E-36 2E-40 316.6 20.6 213 847-1085 4-222 (237)
177 COG1137 YhbG ABC-type (unclass 100.0 1.1E-36 2.3E-41 313.1 12.9 211 162-414 14-228 (243)
178 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.9E-35 4.1E-40 339.9 24.8 202 871-1084 36-245 (269)
179 PRK11831 putative ABC transpor 100.0 2.9E-35 6.4E-40 338.5 26.4 215 846-1084 7-228 (269)
180 TIGR02315 ABC_phnC phosphonate 100.0 9.9E-36 2.2E-40 338.0 22.2 217 847-1084 2-230 (243)
181 PRK13647 cbiO cobalt transport 100.0 2E-35 4.4E-40 340.4 25.0 215 846-1084 4-222 (274)
182 PRK11248 tauB taurine transpor 100.0 2.8E-35 6.2E-40 335.6 25.9 212 847-1084 2-215 (255)
183 cd03263 ABC_subfamily_A The AB 100.0 1.5E-35 3.3E-40 331.3 23.2 203 165-412 15-219 (220)
184 cd03224 ABC_TM1139_LivF_branch 100.0 1.7E-35 3.7E-40 331.4 23.5 202 166-413 14-220 (222)
185 cd03256 ABC_PhnC_transporter A 100.0 2E-35 4.3E-40 335.2 24.2 213 166-413 15-233 (241)
186 PRK11831 putative ABC transpor 100.0 3E-35 6.5E-40 338.4 25.8 206 166-413 21-232 (269)
187 PRK11176 lipid transporter ATP 100.0 7.4E-36 1.6E-40 381.2 23.0 257 78-414 308-567 (582)
188 PRK13647 cbiO cobalt transport 100.0 3.2E-35 7E-40 338.7 26.1 203 166-412 19-225 (274)
189 cd03269 ABC_putative_ATPase Th 100.0 1.8E-35 4E-40 328.2 23.1 197 166-407 14-210 (210)
190 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2E-35 4.4E-40 339.6 24.2 208 163-413 35-249 (269)
191 PRK13634 cbiO cobalt transport 100.0 2.1E-35 4.5E-40 342.9 24.4 218 847-1084 3-230 (290)
192 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.8E-35 6.1E-40 333.9 24.9 205 166-413 15-224 (242)
193 cd03264 ABC_drug_resistance_li 100.0 2.3E-35 4.9E-40 327.7 23.6 208 848-1082 2-211 (211)
194 cd03260 ABC_PstB_phosphate_tra 100.0 1.4E-35 3E-40 333.2 22.2 203 166-411 14-226 (227)
195 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 5.4E-36 1.2E-40 390.3 21.8 261 78-414 436-700 (710)
196 PRK13631 cbiO cobalt transport 100.0 2.8E-35 6E-40 344.9 25.3 216 166-425 40-279 (320)
197 PRK09536 btuD corrinoid ABC tr 100.0 2.4E-35 5.1E-40 352.5 25.0 208 166-413 17-227 (402)
198 PRK13651 cobalt transporter AT 100.0 2.4E-35 5.1E-40 343.5 24.4 204 166-413 21-253 (305)
199 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.6E-35 3.5E-40 330.6 22.1 195 165-403 17-218 (218)
200 PRK11629 lolD lipoprotein tran 100.0 4.3E-35 9.4E-40 330.4 25.7 201 165-409 22-229 (233)
201 PRK10790 putative multidrug tr 100.0 1.8E-35 3.9E-40 377.9 25.6 253 78-414 308-563 (592)
202 COG0411 LivG ABC-type branched 100.0 1E-35 2.2E-40 318.7 19.3 206 870-1084 15-234 (250)
203 PRK10619 histidine/lysine/argi 100.0 5.1E-35 1.1E-39 334.7 26.4 215 846-1084 5-236 (257)
204 PRK10908 cell division protein 100.0 3.9E-35 8.4E-40 328.4 24.9 208 847-1078 2-215 (222)
205 PRK11160 cysteine/glutathione 100.0 9.2E-36 2E-40 377.9 22.4 256 78-414 304-562 (574)
206 TIGR01193 bacteriocin_ABC ABC- 100.0 6.4E-36 1.4E-40 389.2 21.5 257 78-414 438-697 (708)
207 PRK10895 lipopolysaccharide AB 100.0 3.3E-35 7.2E-40 333.1 24.6 214 847-1084 4-221 (241)
208 COG4618 ArpD ABC-type protease 100.0 6.1E-36 1.3E-40 344.9 18.6 256 80-416 304-562 (580)
209 PRK13646 cbiO cobalt transport 100.0 3.1E-35 6.6E-40 341.0 24.7 205 166-413 21-234 (286)
210 PRK13643 cbiO cobalt transport 100.0 3.4E-35 7.3E-40 340.8 25.1 217 847-1084 2-228 (288)
211 cd03257 ABC_NikE_OppD_transpor 100.0 3.2E-35 7E-40 330.6 24.1 217 847-1082 2-228 (228)
212 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5.7E-35 1.2E-39 330.1 26.1 205 166-414 15-221 (236)
213 PRK13651 cobalt transporter AT 100.0 3.1E-35 6.8E-40 342.4 24.6 218 847-1084 3-249 (305)
214 COG4152 ABC-type uncharacteriz 100.0 1.1E-35 2.5E-40 314.0 18.8 202 870-1084 13-214 (300)
215 cd03262 ABC_HisP_GlnQ_permease 100.0 3.1E-35 6.7E-40 327.2 23.4 206 848-1077 2-212 (213)
216 TIGR02315 ABC_phnC phosphonate 100.0 2.1E-35 4.6E-40 335.3 22.6 212 166-412 16-233 (243)
217 PRK15079 oligopeptide ABC tran 100.0 4.3E-35 9.2E-40 344.5 25.7 208 165-413 34-250 (331)
218 cd03235 ABC_Metallic_Cations A 100.0 1.9E-35 4.1E-40 328.8 21.6 199 872-1082 12-213 (213)
219 TIGR00972 3a0107s01c2 phosphat 100.0 5.6E-35 1.2E-39 332.5 25.8 214 847-1084 2-227 (247)
220 PRK13631 cbiO cobalt transport 100.0 3.7E-35 8E-40 343.8 24.9 218 846-1084 21-260 (320)
221 PRK13636 cbiO cobalt transport 100.0 4.4E-35 9.4E-40 339.2 25.3 215 846-1084 5-226 (283)
222 TIGR03740 galliderm_ABC gallid 100.0 6.7E-35 1.5E-39 326.7 25.8 197 872-1085 13-209 (223)
223 PTZ00265 multidrug resistance 100.0 6.7E-36 1.5E-40 407.3 21.3 263 78-414 1126-1452(1466)
224 TIGR00958 3a01208 Conjugate Tr 100.0 9.9E-36 2.1E-40 385.8 21.8 256 78-414 444-702 (711)
225 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 6.9E-35 1.5E-39 329.4 25.9 212 847-1084 2-216 (236)
226 cd03268 ABC_BcrA_bacitracin_re 100.0 3.6E-35 7.7E-40 325.4 22.9 194 166-407 14-208 (208)
227 cd03266 ABC_NatA_sodium_export 100.0 3.6E-35 7.8E-40 327.8 23.1 198 166-407 19-218 (218)
228 PRK13646 cbiO cobalt transport 100.0 4.3E-35 9.4E-40 339.8 24.3 217 847-1084 3-230 (286)
229 COG4559 ABC-type hemin transpo 100.0 2.1E-35 4.6E-40 306.2 19.3 216 847-1085 2-226 (259)
230 PRK11247 ssuB aliphatic sulfon 100.0 4.9E-35 1.1E-39 333.1 24.2 206 846-1084 12-218 (257)
231 KOG0058 Peptide exporter, ABC 100.0 4.7E-36 1E-40 361.9 16.5 217 843-1084 462-686 (716)
232 PRK13635 cbiO cobalt transport 100.0 6E-35 1.3E-39 337.1 25.1 215 166-424 21-242 (279)
233 TIGR02211 LolD_lipo_ex lipopro 100.0 6.5E-35 1.4E-39 326.5 24.5 211 847-1079 2-220 (221)
234 PRK09493 glnQ glutamine ABC tr 100.0 6.7E-35 1.5E-39 330.4 25.0 204 166-413 15-224 (240)
235 cd03225 ABC_cobalt_CbiO_domain 100.0 3.5E-35 7.6E-40 326.2 22.1 193 872-1075 14-210 (211)
236 cd03233 ABC_PDR_domain1 The pl 100.0 4.8E-35 1E-39 322.2 22.9 195 118-407 3-202 (202)
237 PRK11264 putative amino-acid A 100.0 5.9E-35 1.3E-39 333.0 24.5 204 166-413 17-232 (250)
238 PRK11614 livF leucine/isoleuci 100.0 5E-35 1.1E-39 330.8 23.5 212 846-1084 5-221 (237)
239 PRK13650 cbiO cobalt transport 100.0 4.9E-35 1.1E-39 338.1 23.9 216 846-1084 4-224 (279)
240 TIGR03005 ectoine_ehuA ectoine 100.0 8.3E-35 1.8E-39 332.0 25.4 213 848-1084 2-231 (252)
241 PRK14247 phosphate ABC transpo 100.0 1.2E-34 2.5E-39 330.5 26.5 216 847-1084 4-229 (250)
242 cd03226 ABC_cobalt_CbiO_domain 100.0 2.8E-35 6.1E-40 325.4 20.6 191 166-404 14-205 (205)
243 PRK10070 glycine betaine trans 100.0 5.1E-35 1.1E-39 349.4 24.3 207 164-413 40-253 (400)
244 PRK09473 oppD oligopeptide tra 100.0 8.8E-35 1.9E-39 342.1 25.9 214 165-414 29-251 (330)
245 PRK15079 oligopeptide ABC tran 100.0 1.1E-34 2.3E-39 341.1 26.5 229 846-1084 8-246 (331)
246 cd03234 ABCG_White The White s 100.0 7E-35 1.5E-39 327.2 23.9 202 165-407 20-226 (226)
247 cd03264 ABC_drug_resistance_li 100.0 5.2E-35 1.1E-39 324.8 22.6 196 166-407 14-211 (211)
248 PRK11300 livG leucine/isoleuci 100.0 8.8E-35 1.9E-39 332.6 24.9 217 846-1084 5-238 (255)
249 PRK14267 phosphate ABC transpo 100.0 1.3E-34 2.8E-39 330.8 26.1 221 846-1084 4-232 (253)
250 PRK11124 artP arginine transpo 100.0 1.1E-34 2.3E-39 329.2 25.2 213 847-1084 3-225 (242)
251 PRK13636 cbiO cobalt transport 100.0 8.7E-35 1.9E-39 336.7 24.9 206 166-414 20-231 (283)
252 PRK13641 cbiO cobalt transport 100.0 8.7E-35 1.9E-39 337.4 24.9 218 847-1084 3-229 (287)
253 PRK13644 cbiO cobalt transport 100.0 7E-35 1.5E-39 335.9 24.0 213 847-1084 2-219 (274)
254 TIGR01978 sufC FeS assembly AT 100.0 1.2E-34 2.6E-39 329.2 25.5 218 848-1084 2-229 (243)
255 PRK14273 phosphate ABC transpo 100.0 1.3E-34 2.8E-39 330.8 25.9 215 846-1084 7-233 (254)
256 PRK13652 cbiO cobalt transport 100.0 1.1E-34 2.4E-39 335.0 25.3 214 847-1084 4-222 (277)
257 PRK14268 phosphate ABC transpo 100.0 1.5E-34 3.3E-39 330.8 26.2 214 846-1084 12-237 (258)
258 PRK11248 tauB taurine transpor 100.0 1.2E-34 2.6E-39 330.4 25.2 200 166-410 15-216 (255)
259 cd03257 ABC_NikE_OppD_transpor 100.0 1.2E-34 2.7E-39 325.9 24.8 201 166-407 19-228 (228)
260 TIGR03415 ABC_choXWV_ATP choli 100.0 7.6E-35 1.6E-39 345.4 24.2 208 163-413 35-253 (382)
261 PRK13548 hmuV hemin importer A 100.0 1.2E-34 2.6E-39 331.4 24.9 213 847-1084 3-225 (258)
262 TIGR03411 urea_trans_UrtD urea 100.0 1.4E-34 3.1E-39 328.2 25.2 215 847-1084 3-226 (242)
263 cd03298 ABC_ThiQ_thiamine_tran 100.0 9.6E-35 2.1E-39 322.7 23.1 194 877-1082 16-211 (211)
264 PRK10895 lipopolysaccharide AB 100.0 1.1E-34 2.3E-39 329.0 23.8 205 166-413 17-225 (241)
265 PRK11308 dppF dipeptide transp 100.0 1.6E-34 3.5E-39 339.4 26.1 208 165-414 28-244 (327)
266 PRK11247 ssuB aliphatic sulfon 100.0 9.6E-35 2.1E-39 330.7 23.4 194 166-410 26-219 (257)
267 TIGR02211 LolD_lipo_ex lipopro 100.0 1.3E-34 2.8E-39 324.0 24.0 196 165-404 18-220 (221)
268 TIGR03410 urea_trans_UrtE urea 100.0 1.1E-34 2.4E-39 326.6 23.3 201 166-412 14-219 (230)
269 PRK11231 fecE iron-dicitrate t 100.0 1.3E-34 2.9E-39 330.9 24.1 217 847-1085 3-223 (255)
270 PRK13641 cbiO cobalt transport 100.0 1.2E-34 2.6E-39 336.3 24.0 205 165-413 20-233 (287)
271 PRK14241 phosphate transporter 100.0 2.3E-34 5.1E-39 329.4 26.1 217 846-1084 4-237 (258)
272 PRK14245 phosphate ABC transpo 100.0 2.4E-34 5.3E-39 327.8 26.1 219 846-1084 3-229 (250)
273 PRK13632 cbiO cobalt transport 100.0 1.3E-34 2.9E-39 333.5 24.1 204 166-413 23-230 (271)
274 COG4175 ProV ABC-type proline/ 100.0 3.1E-35 6.6E-40 321.2 17.7 222 164-436 40-268 (386)
275 PRK13635 cbiO cobalt transport 100.0 1.3E-34 2.8E-39 334.3 23.9 214 847-1084 6-224 (279)
276 PRK13633 cobalt transporter AT 100.0 1.7E-34 3.6E-39 334.0 24.8 206 165-414 23-233 (280)
277 cd03292 ABC_FtsE_transporter F 100.0 1.1E-34 2.3E-39 323.1 22.4 194 166-403 15-214 (214)
278 cd03233 ABC_PDR_domain1 The pl 100.0 1.9E-34 4.1E-39 317.5 24.0 196 846-1082 3-202 (202)
279 PRK10253 iron-enterobactin tra 100.0 1.4E-34 3.1E-39 332.2 24.1 218 846-1085 7-229 (265)
280 TIGR03005 ectoine_ehuA ectoine 100.0 1.6E-34 3.4E-39 329.8 24.2 205 166-413 14-235 (252)
281 PRK10744 pstB phosphate transp 100.0 2.5E-34 5.4E-39 329.4 25.9 219 842-1084 9-239 (260)
282 PRK10070 glycine betaine trans 100.0 1.4E-34 3E-39 345.6 24.7 201 872-1084 41-249 (400)
283 COG4525 TauB ABC-type taurine 100.0 1.1E-34 2.3E-39 296.4 20.1 204 165-413 18-223 (259)
284 PRK13638 cbiO cobalt transport 100.0 1.5E-34 3.3E-39 333.1 24.1 213 847-1084 2-220 (271)
285 cd03232 ABC_PDR_domain2 The pl 100.0 1.7E-34 3.8E-39 315.3 23.3 190 846-1082 3-192 (192)
286 PRK14242 phosphate transporter 100.0 3E-34 6.6E-39 327.7 26.3 220 845-1084 5-232 (253)
287 PRK11614 livF leucine/isoleuci 100.0 1.4E-34 3.1E-39 327.1 23.3 202 166-413 19-225 (237)
288 TIGR02673 FtsE cell division A 100.0 1.4E-34 3.1E-39 322.0 22.9 193 166-402 16-214 (214)
289 PRK11022 dppD dipeptide transp 100.0 2.5E-34 5.3E-39 338.0 25.9 214 165-414 20-243 (326)
290 TIGR00972 3a0107s01c2 phosphat 100.0 2.9E-34 6.3E-39 326.6 25.8 206 166-413 15-231 (247)
291 TIGR02769 nickel_nikE nickel i 100.0 2.7E-34 5.9E-39 329.9 25.8 223 847-1084 3-235 (265)
292 PRK10575 iron-hydroxamate tran 100.0 1.7E-34 3.7E-39 331.6 24.0 217 846-1084 11-232 (265)
293 cd03267 ABC_NatA_like Similar 100.0 2E-34 4.2E-39 325.4 23.9 233 119-407 1-236 (236)
294 PRK13652 cbiO cobalt transport 100.0 2.4E-34 5.1E-39 332.2 25.1 205 166-413 18-226 (277)
295 PRK13548 hmuV hemin importer A 100.0 2.5E-34 5.5E-39 328.7 24.9 205 166-413 16-229 (258)
296 PRK09984 phosphonate/organopho 100.0 2.3E-34 4.9E-39 330.3 24.6 220 846-1085 4-238 (262)
297 PRK13644 cbiO cobalt transport 100.0 1.9E-34 4.1E-39 332.3 23.9 203 166-413 16-223 (274)
298 COG5265 ATM1 ABC-type transpor 100.0 1.5E-35 3.2E-40 334.6 14.3 255 80-414 228-486 (497)
299 PRK13649 cbiO cobalt transport 100.0 2.6E-34 5.7E-39 332.9 25.0 217 847-1084 3-229 (280)
300 COG0444 DppD ABC-type dipeptid 100.0 2.3E-34 5.1E-39 321.7 23.6 215 164-413 17-242 (316)
301 TIGR01184 ntrCD nitrate transp 100.0 1.6E-34 3.4E-39 324.9 22.4 198 875-1084 1-199 (230)
302 PRK10584 putative ABC transpor 100.0 4.4E-34 9.5E-39 321.3 26.0 213 846-1080 6-226 (228)
303 TIGR03410 urea_trans_UrtE urea 100.0 2.1E-34 4.6E-39 324.3 23.5 210 848-1085 2-217 (230)
304 cd03300 ABC_PotA_N PotA is an 100.0 3.7E-34 8E-39 322.5 25.4 212 848-1084 2-215 (232)
305 TIGR03873 F420-0_ABC_ATP propo 100.0 2.2E-34 4.7E-39 329.3 23.9 216 847-1084 2-221 (256)
306 PRK13648 cbiO cobalt transport 100.0 3.3E-34 7.1E-39 330.0 25.4 204 166-413 23-230 (269)
307 PRK13639 cbiO cobalt transport 100.0 2.9E-34 6.3E-39 331.2 25.0 214 847-1084 2-221 (275)
308 PRK14235 phosphate transporter 100.0 4E-34 8.6E-39 328.8 26.0 220 846-1084 19-246 (267)
309 TIGR03411 urea_trans_UrtD urea 100.0 3.2E-34 6.9E-39 325.4 24.9 211 166-413 16-230 (242)
310 PRK14273 phosphate ABC transpo 100.0 3.7E-34 8E-39 327.1 25.5 206 166-413 21-237 (254)
311 PRK11300 livG leucine/isoleuci 100.0 3.3E-34 7.1E-39 327.9 25.0 220 166-413 19-242 (255)
312 COG4988 CydD ABC-type transpor 100.0 4E-34 8.7E-39 339.8 26.5 213 843-1084 317-538 (559)
313 PRK14237 phosphate transporter 100.0 5.6E-34 1.2E-38 327.5 27.0 224 841-1084 15-246 (267)
314 PRK13649 cbiO cobalt transport 100.0 4.6E-34 9.9E-39 330.9 26.4 204 166-413 21-233 (280)
315 PRK14250 phosphate ABC transpo 100.0 2.9E-34 6.2E-39 325.2 24.1 200 166-413 17-220 (241)
316 TIGR01842 type_I_sec_PrtD type 100.0 1.3E-34 2.9E-39 365.9 23.7 256 78-414 284-542 (544)
317 PRK14256 phosphate ABC transpo 100.0 8E-34 1.7E-38 324.0 27.7 220 846-1084 4-231 (252)
318 PRK10619 histidine/lysine/argi 100.0 3.5E-34 7.6E-39 327.8 24.8 204 166-413 19-240 (257)
319 PRK10908 cell division protein 100.0 3.1E-34 6.7E-39 321.1 23.8 195 166-404 16-216 (222)
320 TIGR02769 nickel_nikE nickel i 100.0 3.8E-34 8.1E-39 328.8 25.1 206 165-413 24-239 (265)
321 TIGR03415 ABC_choXWV_ATP choli 100.0 2.9E-34 6.4E-39 340.4 24.8 203 870-1084 35-249 (382)
322 TIGR01277 thiQ thiamine ABC tr 100.0 3.5E-34 7.6E-39 318.5 23.8 198 874-1083 13-212 (213)
323 PRK14269 phosphate ABC transpo 100.0 4.7E-34 1E-38 324.6 25.2 219 847-1084 3-225 (246)
324 PRK14268 phosphate ABC transpo 100.0 5.4E-34 1.2E-38 326.3 25.9 209 166-413 26-241 (258)
325 TIGR00968 3a0106s01 sulfate AB 100.0 4.9E-34 1.1E-38 322.4 25.1 212 848-1084 2-215 (237)
326 PRK10584 putative ABC transpor 100.0 5E-34 1.1E-38 320.8 25.1 197 166-406 24-227 (228)
327 cd03300 ABC_PotA_N PotA is an 100.0 5.9E-34 1.3E-38 320.9 25.7 205 166-413 14-219 (232)
328 PRK13638 cbiO cobalt transport 100.0 5E-34 1.1E-38 328.8 25.5 204 166-413 15-224 (271)
329 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.3E-32 2.8E-37 357.0 41.8 209 845-1084 450-668 (686)
330 PRK14247 phosphate ABC transpo 100.0 5.5E-34 1.2E-38 325.0 25.5 212 166-413 17-233 (250)
331 PRK13640 cbiO cobalt transport 100.0 4.4E-34 9.5E-39 330.7 25.0 208 166-414 21-232 (282)
332 PRK11022 dppD dipeptide transp 100.0 7.5E-34 1.6E-38 334.0 27.3 223 847-1084 4-238 (326)
333 PRK11124 artP arginine transpo 100.0 3.8E-34 8.3E-39 324.7 23.9 203 166-412 16-228 (242)
334 PRK14257 phosphate ABC transpo 100.0 4.7E-34 1E-38 335.4 25.4 210 166-413 96-312 (329)
335 PRK13632 cbiO cobalt transport 100.0 4.3E-34 9.4E-39 329.2 24.5 215 846-1084 7-226 (271)
336 PRK13639 cbiO cobalt transport 100.0 7.7E-34 1.7E-38 327.6 26.6 204 166-413 16-225 (275)
337 PRK14242 phosphate transporter 100.0 6.2E-34 1.3E-38 325.2 25.6 207 166-413 20-236 (253)
338 PRK11308 dppF dipeptide transp 100.0 6.9E-34 1.5E-38 334.1 26.6 225 846-1084 5-239 (327)
339 cd03267 ABC_NatA_like Similar 100.0 4.6E-34 1E-38 322.3 24.2 200 871-1082 33-236 (236)
340 TIGR01846 type_I_sec_HlyB type 100.0 1.2E-34 2.6E-39 376.2 22.2 257 78-414 421-680 (694)
341 TIGR01978 sufC FeS assembly AT 100.0 4.4E-34 9.6E-39 324.5 24.2 212 166-413 14-233 (243)
342 KOG0057 Mitochondrial Fe/S clu 100.0 1.1E-34 2.3E-39 338.2 19.5 212 843-1084 348-569 (591)
343 PRK13549 xylose transporter AT 100.0 3.3E-34 7.2E-39 358.9 25.4 220 847-1086 6-229 (506)
344 PRK09473 oppD oligopeptide tra 100.0 6.9E-34 1.5E-38 334.5 26.6 224 846-1084 12-246 (330)
345 PRK13547 hmuV hemin importer A 100.0 3.9E-34 8.6E-39 328.4 24.0 219 847-1085 2-240 (272)
346 KOG0066 eIF2-interacting prote 100.0 3E-33 6.4E-38 312.6 29.9 201 844-1084 584-786 (807)
347 PRK13645 cbiO cobalt transport 100.0 4.3E-34 9.3E-39 332.3 24.1 205 166-413 25-239 (289)
348 PRK13648 cbiO cobalt transport 100.0 5.5E-34 1.2E-38 328.1 24.7 216 846-1085 7-227 (269)
349 COG4181 Predicted ABC-type tra 100.0 2.1E-34 4.6E-39 288.3 18.3 197 870-1079 21-225 (228)
350 PRK13633 cobalt transporter AT 100.0 4.5E-34 9.8E-39 330.4 23.9 218 847-1084 5-228 (280)
351 PRK14250 phosphate ABC transpo 100.0 4.3E-34 9.3E-39 323.8 23.2 209 846-1084 3-216 (241)
352 TIGR03608 L_ocin_972_ABC putat 100.0 4.2E-34 9.1E-39 316.4 22.6 189 872-1072 11-206 (206)
353 PRK13645 cbiO cobalt transport 100.0 5.1E-34 1.1E-38 331.7 24.4 219 846-1084 6-235 (289)
354 PRK13657 cyclic beta-1,2-gluca 100.0 2.5E-34 5.5E-39 366.9 23.9 207 166-414 349-558 (588)
355 cd03298 ABC_ThiQ_thiamine_tran 100.0 4E-34 8.6E-39 317.7 22.2 195 170-407 16-211 (211)
356 TIGR03740 galliderm_ABC gallid 100.0 6.2E-34 1.3E-38 318.9 23.9 196 166-410 14-209 (223)
357 PRK10575 iron-hydroxamate tran 100.0 4.3E-34 9.4E-39 328.3 23.2 209 166-413 25-236 (265)
358 PRK10789 putative multidrug tr 100.0 1.9E-34 4.2E-39 365.7 22.4 256 78-414 280-538 (569)
359 PRK14259 phosphate ABC transpo 100.0 7.4E-34 1.6E-38 326.7 25.1 219 845-1084 12-248 (269)
360 PRK14267 phosphate ABC transpo 100.0 7.9E-34 1.7E-38 324.3 25.1 212 166-413 18-236 (253)
361 PRK10253 iron-enterobactin tra 100.0 6.1E-34 1.3E-38 327.0 24.2 209 166-413 21-232 (265)
362 PRK10771 thiQ thiamine transpo 100.0 5.9E-34 1.3E-38 321.0 23.6 202 170-414 17-219 (232)
363 PRK13640 cbiO cobalt transport 100.0 5.7E-34 1.2E-38 329.7 24.1 217 846-1084 5-227 (282)
364 PRK10771 thiQ thiamine transpo 100.0 4.9E-34 1.1E-38 321.6 22.8 211 847-1084 2-214 (232)
365 PRK14239 phosphate transporter 100.0 1E-33 2.2E-38 323.3 25.7 219 846-1084 5-231 (252)
366 cd03299 ABC_ModC_like Archeal 100.0 8.2E-34 1.8E-38 320.2 24.7 204 167-413 14-218 (235)
367 TIGR00968 3a0106s01 sulfate AB 100.0 8.7E-34 1.9E-38 320.4 24.9 205 166-413 14-219 (237)
368 cd03299 ABC_ModC_like Archeal 100.0 9.6E-34 2.1E-38 319.7 25.1 199 874-1084 14-214 (235)
369 cd03225 ABC_cobalt_CbiO_domain 100.0 3.9E-34 8.4E-39 317.9 21.5 194 165-402 14-211 (211)
370 PRK14270 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 322.6 25.8 215 846-1084 4-230 (251)
371 PRK15093 antimicrobial peptide 100.0 8.7E-34 1.9E-38 334.6 25.7 217 165-413 20-247 (330)
372 PRK14274 phosphate ABC transpo 100.0 1.1E-33 2.4E-38 324.1 25.8 219 846-1084 12-238 (259)
373 PRK14244 phosphate ABC transpo 100.0 1E-33 2.2E-38 323.0 25.3 218 848-1084 7-232 (251)
374 COG1245 Predicted ATPase, RNas 100.0 4.4E-33 9.5E-38 315.9 30.0 173 875-1073 357-530 (591)
375 TIGR02203 MsbA_lipidA lipid A 100.0 2E-34 4.3E-39 367.6 21.6 257 78-414 297-556 (571)
376 PLN03130 ABC transporter C fam 100.0 2.2E-34 4.8E-39 396.1 23.6 257 78-414 1199-1461(1622)
377 PRK15093 antimicrobial peptide 100.0 1.2E-33 2.7E-38 333.3 26.6 225 847-1084 4-243 (330)
378 cd03213 ABCG_EPDR ABCG transpo 100.0 8.5E-34 1.9E-38 310.3 23.5 190 846-1082 3-194 (194)
379 PRK14240 phosphate transporter 100.0 1.2E-33 2.7E-38 322.1 25.8 219 846-1084 3-229 (250)
380 PRK14262 phosphate ABC transpo 100.0 1.2E-33 2.7E-38 322.1 25.7 218 847-1084 4-229 (250)
381 PRK11231 fecE iron-dicitrate t 100.0 6.2E-34 1.3E-38 325.4 23.1 208 166-413 16-226 (255)
382 PRK15112 antimicrobial peptide 100.0 7.5E-34 1.6E-38 326.5 23.9 223 847-1084 5-234 (267)
383 TIGR03873 F420-0_ABC_ATP propo 100.0 7.8E-34 1.7E-38 324.7 23.9 208 166-413 15-225 (256)
384 PRK09984 phosphonate/organopho 100.0 7.9E-34 1.7E-38 325.8 23.8 215 166-412 18-240 (262)
385 PRK15112 antimicrobial peptide 100.0 9.3E-34 2E-38 325.7 24.4 207 165-413 26-238 (267)
386 PRK10744 pstB phosphate transp 100.0 1.2E-33 2.6E-38 323.9 25.1 229 113-413 8-243 (260)
387 PRK14253 phosphate ABC transpo 100.0 1.4E-33 3E-38 321.5 25.6 219 846-1084 3-228 (249)
388 PRK11144 modC molybdate transp 100.0 4.3E-34 9.3E-39 339.8 22.2 195 170-413 16-217 (352)
389 TIGR01277 thiQ thiamine ABC tr 100.0 8.3E-34 1.8E-38 315.5 23.0 199 167-408 13-212 (213)
390 PRK13642 cbiO cobalt transport 100.0 1.5E-33 3.2E-38 325.7 25.9 204 166-413 21-228 (277)
391 PRK11144 modC molybdate transp 100.0 8.9E-34 1.9E-38 337.1 24.7 190 877-1084 16-213 (352)
392 PRK14257 phosphate ABC transpo 100.0 1.6E-33 3.5E-38 330.9 26.6 222 845-1084 79-308 (329)
393 TIGR02142 modC_ABC molybdenum 100.0 9.1E-34 2E-38 337.6 24.8 194 877-1084 15-216 (354)
394 PRK14235 phosphate transporter 100.0 1.4E-33 3E-38 324.3 25.4 208 166-413 33-250 (267)
395 cd03297 ABC_ModC_molybdenum_tr 100.0 1.1E-33 2.3E-38 315.0 23.7 191 877-1082 16-214 (214)
396 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3.6E-32 7.7E-37 354.6 41.9 210 845-1084 476-695 (710)
397 COG4525 TauB ABC-type taurine 100.0 5.5E-34 1.2E-38 291.2 19.3 200 872-1084 18-219 (259)
398 TIGR01192 chvA glucan exporter 100.0 4.2E-34 9.2E-39 363.2 23.1 257 78-414 299-558 (585)
399 TIGR02142 modC_ABC molybdenum 100.0 6.6E-34 1.4E-38 338.8 23.2 199 170-413 15-220 (354)
400 cd03262 ABC_HisP_GlnQ_permease 100.0 5.3E-34 1.2E-38 317.3 21.0 194 166-403 14-213 (213)
401 PRK14260 phosphate ABC transpo 100.0 1.6E-33 3.6E-38 322.5 25.6 220 846-1084 7-238 (259)
402 TIGR02770 nickel_nikD nickel i 100.0 7.1E-34 1.5E-38 319.8 22.2 207 167-413 1-214 (230)
403 PRK14258 phosphate ABC transpo 100.0 1.9E-33 4.2E-38 322.2 26.1 221 846-1084 7-240 (261)
404 PRK14237 phosphate transporter 100.0 2E-33 4.2E-38 323.0 26.2 229 113-413 15-250 (267)
405 PRK14236 phosphate transporter 100.0 2.2E-33 4.7E-38 323.6 26.5 220 845-1084 24-251 (272)
406 TIGR01184 ntrCD nitrate transp 100.0 6E-34 1.3E-38 320.1 21.3 202 168-412 1-202 (230)
407 TIGR02770 nickel_nikD nickel i 100.0 9E-34 2E-38 318.9 22.4 201 874-1084 1-210 (230)
408 PRK14272 phosphate ABC transpo 100.0 2.6E-33 5.6E-38 319.9 26.4 216 846-1084 4-231 (252)
409 PRK14241 phosphate transporter 100.0 1.9E-33 4.1E-38 321.9 25.2 211 166-413 18-241 (258)
410 PRK14245 phosphate ABC transpo 100.0 2E-33 4.3E-38 320.4 25.2 209 166-413 17-233 (250)
411 PLN03232 ABC transporter C fam 100.0 3.1E-34 6.7E-39 395.1 22.2 259 78-414 1196-1458(1495)
412 TIGR01193 bacteriocin_ABC ABC- 100.0 4.5E-32 9.8E-37 353.2 41.3 211 845-1084 472-692 (708)
413 PRK10762 D-ribose transporter 100.0 1.2E-33 2.6E-38 353.5 25.4 218 847-1086 5-227 (501)
414 PRK14270 phosphate ABC transpo 100.0 2.6E-33 5.5E-38 319.6 25.8 210 166-413 18-234 (251)
415 PRK10418 nikD nickel transport 100.0 2.4E-33 5.3E-38 320.2 25.5 214 845-1084 3-225 (254)
416 TIGR02982 heterocyst_DevA ABC 100.0 1.9E-33 4.2E-38 314.1 24.1 211 847-1078 2-219 (220)
417 PRK14269 phosphate ABC transpo 100.0 2.1E-33 4.6E-38 319.2 24.8 208 166-413 16-229 (246)
418 PRK11701 phnK phosphonate C-P 100.0 2.3E-33 5E-38 321.2 25.2 215 846-1084 6-236 (258)
419 PRK13642 cbiO cobalt transport 100.0 1.7E-33 3.7E-38 325.1 24.3 216 846-1084 4-224 (277)
420 PRK11701 phnK phosphonate C-P 100.0 2.4E-33 5.2E-38 321.1 25.1 206 166-413 20-240 (258)
421 PRK14256 phosphate ABC transpo 100.0 3.2E-33 6.9E-38 319.0 26.0 211 166-413 18-235 (252)
422 COG0444 DppD ABC-type dipeptid 100.0 2.8E-33 6E-38 313.1 24.7 224 847-1084 2-238 (316)
423 PRK10418 nikD nickel transport 100.0 3.1E-33 6.6E-38 319.3 25.7 205 167-413 18-229 (254)
424 PRK14249 phosphate ABC transpo 100.0 3E-33 6.6E-38 319.0 25.7 219 846-1084 4-230 (251)
425 PRK14261 phosphate ABC transpo 100.0 3.1E-33 6.6E-38 319.4 25.6 219 846-1084 6-232 (253)
426 PRK14263 phosphate ABC transpo 100.0 3.5E-33 7.6E-38 319.5 26.1 218 846-1084 8-240 (261)
427 PRK09700 D-allose transporter 100.0 1.4E-33 3E-38 353.9 24.8 218 846-1085 5-230 (510)
428 PRK00349 uvrA excinuclease ABC 100.0 3.2E-32 7E-37 351.7 38.0 122 947-1084 792-922 (943)
429 PRK00635 excinuclease ABC subu 100.0 6E-32 1.3E-36 360.8 41.7 134 943-1084 759-901 (1809)
430 PRK14239 phosphate transporter 100.0 3.3E-33 7.2E-38 319.0 25.6 210 166-413 19-235 (252)
431 PRK14274 phosphate ABC transpo 100.0 2.9E-33 6.4E-38 320.5 25.2 210 166-413 26-242 (259)
432 PRK11174 cysteine/glutathione 100.0 8E-34 1.7E-38 362.8 22.7 210 845-1084 348-567 (588)
433 PRK14275 phosphate ABC transpo 100.0 3.4E-33 7.4E-38 323.7 25.8 215 846-1084 39-265 (286)
434 cd03235 ABC_Metallic_Cations A 100.0 8E-34 1.7E-38 315.8 19.5 200 165-407 12-213 (213)
435 PRK14271 phosphate ABC transpo 100.0 4.1E-33 8.9E-38 321.4 26.1 219 846-1084 21-246 (276)
436 PRK14248 phosphate ABC transpo 100.0 3E-33 6.5E-38 322.0 24.8 215 846-1084 21-247 (268)
437 PRK13543 cytochrome c biogenes 100.0 2.9E-33 6.3E-38 311.2 23.7 201 846-1073 11-211 (214)
438 PRK14262 phosphate ABC transpo 100.0 3.8E-33 8.2E-38 318.1 25.0 210 166-413 17-233 (250)
439 PRK14251 phosphate ABC transpo 100.0 4.3E-33 9.3E-38 317.9 25.5 215 846-1084 4-230 (251)
440 PRK14255 phosphate ABC transpo 100.0 5.8E-33 1.3E-37 317.0 26.4 219 846-1084 5-231 (252)
441 PRK14259 phosphate ABC transpo 100.0 2.9E-33 6.3E-38 321.8 24.1 206 166-414 27-253 (269)
442 PRK15056 manganese/iron transp 100.0 2.8E-33 6E-38 322.6 23.9 218 846-1085 6-226 (272)
443 PRK13538 cytochrome c biogenes 100.0 2.2E-33 4.7E-38 309.9 22.0 199 847-1072 2-202 (204)
444 TIGR02204 MsbA_rel ABC transpo 100.0 9.6E-34 2.1E-38 361.5 22.0 259 78-414 301-563 (576)
445 PRK14240 phosphate transporter 100.0 5.5E-33 1.2E-37 316.8 25.4 210 166-413 17-233 (250)
446 cd03231 ABC_CcmA_heme_exporter 100.0 2.1E-33 4.6E-38 309.2 21.2 184 872-1072 13-198 (201)
447 PRK13547 hmuV hemin importer A 100.0 3.9E-33 8.5E-38 320.2 24.2 212 166-413 15-243 (272)
448 TIGR02633 xylG D-xylose ABC tr 100.0 3.7E-33 8E-38 349.4 25.9 220 847-1086 2-227 (500)
449 PRK14248 phosphate ABC transpo 100.0 8E-33 1.7E-37 318.4 26.7 207 166-413 35-251 (268)
450 PRK10419 nikE nickel transport 100.0 5.4E-33 1.2E-37 319.4 25.2 224 847-1085 4-237 (268)
451 PRK14265 phosphate ABC transpo 100.0 7.6E-33 1.6E-37 319.0 26.4 219 845-1084 19-253 (274)
452 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 5.4E-33 1.2E-37 311.0 24.4 192 870-1082 33-224 (224)
453 cd03252 ABCC_Hemolysin The ABC 100.0 2.2E-33 4.7E-38 317.5 21.4 205 166-414 16-225 (237)
454 COG4181 Predicted ABC-type tra 100.0 2.1E-33 4.7E-38 281.1 18.6 201 161-405 19-226 (228)
455 PRK14254 phosphate ABC transpo 100.0 7.3E-33 1.6E-37 320.6 26.1 213 846-1084 39-264 (285)
456 PRK15439 autoinducer 2 ABC tra 100.0 3.2E-33 6.9E-38 349.8 24.8 211 846-1085 11-225 (510)
457 PRK14272 phosphate ABC transpo 100.0 7.5E-33 1.6E-37 316.1 25.7 207 166-413 18-235 (252)
458 PRK14271 phosphate ABC transpo 100.0 8E-33 1.7E-37 319.0 26.2 210 166-413 35-250 (276)
459 TIGR01846 type_I_sec_HlyB type 100.0 1.1E-31 2.5E-36 348.4 39.8 213 844-1084 453-675 (694)
460 cd03213 ABCG_EPDR ABCG transpo 100.0 5.4E-33 1.2E-37 304.0 23.1 170 165-407 22-194 (194)
461 PRK14238 phosphate transporter 100.0 6.2E-33 1.3E-37 319.4 24.8 218 846-1084 24-250 (271)
462 cd03252 ABCC_Hemolysin The ABC 100.0 1.1E-33 2.5E-38 319.8 18.3 209 848-1084 2-220 (237)
463 PRK14236 phosphate transporter 100.0 8.4E-33 1.8E-37 318.7 25.8 210 166-413 39-255 (272)
464 TIGR02868 CydC thiol reductant 100.0 7E-34 1.5E-38 358.8 18.2 226 78-383 297-527 (529)
465 TIGR00957 MRP_assoc_pro multi 100.0 1.3E-33 2.7E-38 389.5 22.1 257 78-414 1246-1508(1522)
466 PRK11288 araG L-arabinose tran 100.0 4.9E-33 1.1E-37 348.0 25.4 217 846-1084 4-224 (501)
467 PRK14249 phosphate ABC transpo 100.0 1E-32 2.2E-37 314.7 25.8 210 166-413 18-234 (251)
468 PRK14251 phosphate ABC transpo 100.0 8E-33 1.7E-37 315.6 24.8 210 166-413 18-234 (251)
469 PRK14253 phosphate ABC transpo 100.0 6.7E-33 1.5E-37 315.9 24.1 209 166-412 17-231 (249)
470 PRK14275 phosphate ABC transpo 100.0 9.6E-33 2.1E-37 320.0 25.8 207 166-413 53-269 (286)
471 CHL00131 ycf16 sulfate ABC tra 100.0 1.2E-32 2.6E-37 314.5 26.0 220 846-1084 7-236 (252)
472 PRK14244 phosphate ABC transpo 100.0 8.8E-33 1.9E-37 315.2 24.9 211 166-413 19-236 (251)
473 PRK14243 phosphate transporter 100.0 8E-33 1.7E-37 317.4 24.7 218 846-1084 10-243 (264)
474 PRK14261 phosphate ABC transpo 100.0 9.6E-33 2.1E-37 315.3 25.1 210 166-413 20-236 (253)
475 TIGR02323 CP_lyasePhnK phospho 100.0 8.7E-33 1.9E-37 315.7 24.5 214 847-1084 4-233 (253)
476 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.5E-33 7.7E-38 319.9 21.3 198 166-414 18-225 (275)
477 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.1E-33 6.7E-38 320.4 20.7 210 846-1084 2-220 (275)
478 PRK14258 phosphate ABC transpo 100.0 1.2E-32 2.6E-37 315.6 25.7 212 166-413 21-244 (261)
479 cd03297 ABC_ModC_molybdenum_tr 100.0 5E-33 1.1E-37 309.5 21.9 192 170-407 16-214 (214)
480 PRK10247 putative ABC transpor 100.0 5.6E-33 1.2E-37 311.4 22.3 209 846-1082 7-220 (225)
481 PRK10982 galactose/methyl gala 100.0 5E-33 1.1E-37 347.2 24.4 206 872-1086 11-220 (491)
482 cd03230 ABC_DR_subfamily_A Thi 100.0 5.2E-33 1.1E-37 298.6 21.1 156 873-1075 14-171 (173)
483 COG1132 MdlB ABC-type multidru 100.0 1.2E-33 2.6E-38 359.1 18.9 212 844-1084 326-547 (567)
484 TIGR01166 cbiO cobalt transpor 100.0 4.2E-33 9.2E-38 304.2 20.6 178 872-1059 5-188 (190)
485 PRK03695 vitamin B12-transport 100.0 7.2E-33 1.6E-37 314.8 23.2 197 874-1084 11-217 (248)
486 TIGR02323 CP_lyasePhnK phospho 100.0 1.2E-32 2.6E-37 314.6 25.1 206 166-413 17-237 (253)
487 PRK14266 phosphate ABC transpo 100.0 1E-32 2.3E-37 314.5 24.6 218 847-1084 4-229 (250)
488 PRK10419 nikE nickel transport 100.0 1.1E-32 2.3E-37 316.9 24.9 206 165-413 25-240 (268)
489 PRK11176 lipid transporter ATP 100.0 2.3E-33 4.9E-38 358.4 21.3 213 845-1084 340-562 (582)
490 PRK14260 phosphate ABC transpo 100.0 1E-32 2.2E-37 316.0 24.4 210 166-413 21-242 (259)
491 COG4987 CydC ABC-type transpor 100.0 1.6E-33 3.4E-38 328.6 17.6 211 846-1084 336-556 (573)
492 PRK14246 phosphate ABC transpo 100.0 1.7E-32 3.6E-37 313.2 25.8 216 846-1084 10-236 (257)
493 PRK14255 phosphate ABC transpo 100.0 1.9E-32 4.1E-37 312.7 26.1 210 166-413 19-235 (252)
494 PRK10790 putative multidrug tr 100.0 4.6E-33 1E-37 355.8 23.4 210 845-1084 339-558 (592)
495 PRK10247 putative ABC transpor 100.0 6.5E-33 1.4E-37 310.8 21.7 198 166-410 21-223 (225)
496 TIGR02982 heterocyst_DevA ABC 100.0 1.1E-32 2.3E-37 308.2 23.2 196 165-403 18-219 (220)
497 PRK14265 phosphate ABC transpo 100.0 1.3E-32 2.7E-37 317.2 24.5 232 108-413 10-257 (274)
498 PRK13539 cytochrome c biogenes 100.0 7.5E-33 1.6E-37 306.3 21.6 197 847-1073 3-199 (207)
499 PRK14238 phosphate transporter 100.0 1.6E-32 3.5E-37 316.0 24.8 207 166-413 38-254 (271)
500 cd03245 ABCC_bacteriocin_expor 100.0 4.3E-33 9.2E-38 311.6 19.5 209 847-1082 3-220 (220)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.8e-256 Score=2360.59 Aligned_cols=1340 Identities=53% Similarity=0.924 Sum_probs=1257.5
Q ss_pred cchhHhhhHHHHhhCCChhhhhhcccccC-CCCcccccccccChHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCC
Q 000523 36 EDDEEALKWAALEKLPTYNRLRKGILTTS-RGEANEVDVYNLGLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDL 114 (1445)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1445)
+||||+|||||+|||||++| +++.+. ++ ++|+.+++..++..+.++..+..++|+++++.+++++.+++ ++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~ 83 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFES---EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--EL 83 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhccC---cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cC
Confidence 45999999999999999999 555432 22 79999999999999999999999999999999999999998 88
Q ss_pred CcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhhcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHH
Q 000523 115 PKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTL 194 (1445)
Q Consensus 115 ~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTL 194 (1445)
|.++++++++.+++++..| ||+.|...+.++.++...+.. ++.+.+||+|+|+.++||||++++||||||||||
T Consensus 84 p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttl 157 (1391)
T KOG0065|consen 84 PTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTL 157 (1391)
T ss_pred CceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHH
Confidence 9999999999999998766 999999999999888766543 5566789999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcC
Q 000523 195 LLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAG 274 (1445)
Q Consensus 195 L~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (1445)
|++|+|.++...+..|+|+|||++.+++.+++.++|++|+|.|+|+|||||+|+|+++|++++.|++ +..|++++.
T Consensus 158 lkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~- 233 (1391)
T KOG0065|consen 158 LKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA- 233 (1391)
T ss_pred HHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH-
Confidence 9999999998878889999999999999999999999999999999999999999999999998887 445555431
Q ss_pred CCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCC
Q 000523 275 IKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGL 354 (1445)
Q Consensus 275 ~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgL 354 (1445)
.++|++++++||++|+||+|||+++||+||||||||+||+++++++++++|||+|+||
T Consensus 234 ----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GL 291 (1391)
T KOG0065|consen 234 ----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGL 291 (1391)
T ss_pred ----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeecccccc
Confidence 2689999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHH
Q 000523 355 DSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQ 434 (1445)
Q Consensus 355 D~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ 434 (1445)
|++|+.+++++||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||++
T Consensus 292 DSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt 371 (1391)
T KOG0065|consen 292 DSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLT 371 (1391)
T ss_pred cHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCcccccccccccccccccCcHHHHHHHHHHHHHH
Q 000523 435 EVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELL 514 (1445)
Q Consensus 435 ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~ 514 (1445)
++++++++.|+|..++.++.+.++.|+.+.|.+++.++++..+++.+.++.+.++.++..++|.++.|+|+++|+.|+++
T Consensus 372 ~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~ 451 (1391)
T KOG0065|consen 372 EVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFL 451 (1391)
T ss_pred HhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccchhhHHHHHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCC
Q 000523 515 LMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRF 594 (1445)
Q Consensus 515 ~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~ 594 (1445)
+++||.+++++++++.+++++++|++|+++.+ ++..++..+.|++||++++.+|+++++++++++++|||+|||+..|
T Consensus 452 l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~f 529 (1391)
T KOG0065|consen 452 LMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSF 529 (1391)
T ss_pred HHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhcccc
Confidence 99999999999999999999999999999885 5566788899999999999999999999999999999999999999
Q ss_pred cCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 000523 595 FPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFA 674 (1445)
Q Consensus 595 y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rff~~~~~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~ 674 (1445)
|++|++.++++++++|++++++++|.+|+||++|+.++++|||.+|+++++.+++++++|++++++++++.+|+.+|++.
T Consensus 530 Y~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~ 609 (1391)
T KOG0065|consen 530 YPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGIL 609 (1391)
T ss_pred cChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHHhcCCccccc------------ccC---CccccHHHHHhh
Q 000523 675 LLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKF------------TQD---SSETLGVQVLKS 739 (1445)
Q Consensus 675 ~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~~------------~~~---~~~~~G~~~L~~ 739 (1445)
++++.+++||+|+..+||+||+|++|++|++|+++++++|||++.+|.|. ... ...++|..+++.
T Consensus 610 ~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g 689 (1391)
T KOG0065|consen 610 LLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSG 689 (1391)
T ss_pred HHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEec
Confidence 99999999999999999999999999999999999999999999999997 111 235678899998
Q ss_pred cCcc-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeccccccccccccCCccccccCCCCCCccc
Q 000523 740 RGFF-----AHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSTDDIR 814 (1445)
Q Consensus 740 ~g~~-----~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (1445)
+++. ...+|+|+++|+++||.++|++++++++.|+++..+.+..+..+...+........ ... .
T Consensus 690 ~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~~---------~~~--~ 758 (1391)
T KOG0065|consen 690 RDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSAG---------SSS--E 758 (1391)
T ss_pred ccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhcc---------ccc--c
Confidence 8887 77889999999999999999999999999999998888877655443321110000 000 0
Q ss_pred cccccchhhhhhhhhcCCCCCCCCcccCCCceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCC
Q 000523 815 GQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVS 894 (1445)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~s 894 (1445)
.+ ...+....++++++.|+.|..++++||.|.+++|-+++.+| +++++|+||||.++||.++||||+|
T Consensus 759 --------~~-~~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~S 826 (1391)
T KOG0065|consen 759 --------IE-KLDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGES 826 (1391)
T ss_pred --------cc-ccccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCC
Confidence 00 00001111356788899999999999999999999888877 6788999999999999999999999
Q ss_pred CCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHH
Q 000523 895 GAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFI 974 (1445)
Q Consensus 895 GaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v 974 (1445)
|||||||||+||||+++|.++|+|.|||+|.++.+|+|.+|||+|+|+|.+.+||+|+|.|+|+||++.+++.+++.++|
T Consensus 827 GAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yV 906 (1391)
T KOG0065|consen 827 GAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYV 906 (1391)
T ss_pred CCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHH
Confidence 99999999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCC-CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEE
Q 000523 975 DEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVC 1053 (1445)
Q Consensus 975 ~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p-~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~ 1053 (1445)
|+|++.+||.+++|.+||.+| +|||++|||||+||+||++|| .||||||||||||+++|..|++++|+++++|+||||
T Consensus 907 e~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlC 985 (1391)
T KOG0065|consen 907 EEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILC 985 (1391)
T ss_pred HHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEE
Confidence 999999999999999999999 999999999999999999999 899999999999999999999999999999999999
Q ss_pred EecCccHHHHHhhceEeEEecCcEEEEEcCCCCchhhHHHHHHhCCCcccCCCCCCccceEEEeccchhhhhhcccHHHH
Q 000523 1054 TIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAASQELALGIDFTEH 1133 (1445)
Q Consensus 1054 ~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~~~~~~~~d~~~~ 1133 (1445)
|+||||.++|+.||++++|++||++||+||+|++|+++++|||++||++ |++..|||||||||++.+.+...+.||++.
T Consensus 986 TIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~ 1064 (1391)
T KOG0065|consen 986 TIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEI 1064 (1391)
T ss_pred EecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhcccccccccCccHHHH
Confidence 9999999999999999999999999999999999999999999999985 666669999999999998888888999999
Q ss_pred HhhcHHHHHHHHHHHhhCCCCCC-CCCCCCCCccCCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhcc
Q 000523 1134 YKRSDLYRRNKALIEDLSRPPPG-SKDLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWD 1212 (1445)
Q Consensus 1134 ~~~S~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~ 1212 (1445)
|++|++|++++++++++++++++ +.+..++++|++|+|.|++.|+|||+++|||+|+|+++|++++++.||++|++||+
T Consensus 1065 w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~ 1144 (1391)
T KOG0065|consen 1065 WKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWK 1144 (1391)
T ss_pred HhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeee
Confidence 99999999999999999999998 88888999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHhhHHHHHhHHHHHHHHHHHHhhhhcchhhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhh
Q 000523 1213 LGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAI 1292 (1445)
Q Consensus 1213 ~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i 1292 (1445)
+|+ ++||++|.+|++|+++++.+.+++..++|.+..||.++|||+++||||+.||++||+++|+||.++++++|++|
T Consensus 1145 ~g~---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~ 1221 (1391)
T KOG0065|consen 1145 VGH---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLI 1221 (1391)
T ss_pred cCC---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhhee
Confidence 994 68999999999999999999999988999999999999999999999999999999999999999999999999
Q ss_pred eecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhccc
Q 000523 1293 VYAMIGFEWTAAKFFWYIFFMYFTLLFFTFYGMMAVALTPNHHIAAIVSTLFYGLWNVFSGFIIPRPRIPIWWRWYYWAN 1372 (1445)
Q Consensus 1293 ~Y~~~g~~~~~~~f~~f~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~s 1372 (1445)
+|+|+||++++.+|+||++++++..+|++++|||+.+++||.++|+++++++++++++||||++|++.||.||+|+||+|
T Consensus 1222 ~Y~~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~ls 1301 (1391)
T KOG0065|consen 1222 TYYPIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLS 1301 (1391)
T ss_pred eeeeccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCccccc---------CCCCcHHHHHHhhcC----CccCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 000523 1373 PIAWTLYGLVASQFGDMDDKKM---------DTGETVKQFLKDYFD----FKHDFLGVVAAVLVVFAVLFGFLFALGIKM 1439 (1445)
Q Consensus 1373 p~~y~~~~l~~~~~~~~~~~~~---------~~g~~~~~~~~~~~g----~~~~~~~~~~~il~~~~~~f~~~~~~~l~~ 1439 (1445)
|++|.++|++..++||.+..|. ++|+|+++|++++|| |.++.......+..+|.+++.+++.+++|+
T Consensus 1302 P~ty~l~gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~~~~l~~f~~~y 1381 (1391)
T KOG0065|consen 1302 PVTYTLEGLISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLATTACVYCAYTVADAFLAAFNIKY 1381 (1391)
T ss_pred cHHHHHHHHHHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcceeEEEEeeeehHHHHHHHHHHHH
Confidence 9999999999999999988773 246799999999999 999999888888999999999999999999
Q ss_pred hcccCC
Q 000523 1440 FNFQRR 1445 (1445)
Q Consensus 1440 ~~~~~r 1445 (1445)
.|||||
T Consensus 1382 ~~~wrn 1387 (1391)
T KOG0065|consen 1382 LNFWRN 1387 (1391)
T ss_pred HHHHHh
Confidence 999987
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.2e-238 Score=2368.47 Aligned_cols=1426 Identities=62% Similarity=1.073 Sum_probs=1275.7
Q ss_pred cccccccCCCcccCC---C----CCcchhHhhhHHHHhhCCChhhhhhcccccC-----CCC---cccccccccChHhhH
Q 000523 18 ASRWNTNSIGAFSRS---S----REEDDEEALKWAALEKLPTYNRLRKGILTTS-----RGE---ANEVDVYNLGLQERQ 82 (1445)
Q Consensus 18 ~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~ 82 (1445)
.++|.. +++|++. + ..|||||+|+|||+||||||+|+|++++.+. .|+ .+|+|+++|+.++++
T Consensus 18 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (1470)
T PLN03140 18 RSSRNM--EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQ 95 (1470)
T ss_pred hhhhhh--hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHH
Confidence 345744 6888542 2 2578999999999999999999999999652 122 236999999999999
Q ss_pred HHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhhcCCcc
Q 000523 83 RLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKK 162 (1445)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~ 162 (1445)
.++||++++.++|+++|++++++|.|++|+++|++||||+||+|+++++++++.+||++|.+.+.++.+.+.++...+++
T Consensus 96 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~ 175 (1470)
T PLN03140 96 KFIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKK 175 (1470)
T ss_pred HHHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998876555434455
Q ss_pred ccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCC
Q 000523 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1445)
.+++||+|+|+.++|||+++|+||||||||||||+|+|+++|+.+++|+|++||+++++..+++.++||+|+|.|++++|
T Consensus 176 ~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lT 255 (1470)
T PLN03140 176 TKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMT 255 (1470)
T ss_pred ccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCc
Confidence 67889999999999999999999999999999999999999887889999999999887777788999999999999999
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
|+|||.|+++|++.+.++++..+..+++++.++.|+.++|.+|++...++.+.+..++++|+.+||++|+||.||+++++
T Consensus 256 V~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~r 335 (1470)
T PLN03140 256 VKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIR 335 (1470)
T ss_pred HHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCcccc
Confidence 99999999999877666655556667777777888889999999988888888889999999999999999999999999
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1445)
+|||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||.++++++||+|++|++|+
T Consensus 336 glSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ 415 (1470)
T PLN03140 336 GISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQ 415 (1470)
T ss_pred CCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCce
Confidence 99999999999999999999999999999999999999999999999876678999999999999999999999999999
Q ss_pred EEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCc
Q 000523 403 IVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPF 482 (1445)
Q Consensus 403 iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 482 (1445)
++|+||++++.+||+++||+||+++++|||+++++++++++++|.....|+++.++++++++|++++.++++.+++..+.
T Consensus 416 ivy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 495 (1470)
T PLN03140 416 IVYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPF 495 (1470)
T ss_pred EEEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999998888888776678888899999999999999988888877776
Q ss_pred ccccccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccchhhHHHH
Q 000523 483 DKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATF 562 (1445)
Q Consensus 483 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~~g~lf 562 (1445)
++...++.....++|..++++|+++|++|++++++||+..+++|+++.+++|+++|++|++++.+..+..++..+.|++|
T Consensus 496 ~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lf 575 (1470)
T PLN03140 496 DKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALL 575 (1470)
T ss_pred hhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHH
Confidence 66555666666678999999999999999999999999999999999999999999999998776555566778899999
Q ss_pred HHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHH
Q 000523 563 FAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYAL 642 (1445)
Q Consensus 563 f~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rff~~~~~ 642 (1445)
|++++.+++++++++.++.++|||+|||+.+||++|+|++|+++.++|+.++++++|++|+|||+|+++++++||.++++
T Consensus 576 f~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~ 655 (1470)
T PLN03140 576 FSMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLL 655 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHHhcCCccc
Q 000523 643 LLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWK 722 (1445)
Q Consensus 643 ~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~ 722 (1445)
+++++++++++|++++++++++.+|+.+++++++++++++||++++++||+||+|++|+||++|+++|+++|||.+.+|.
T Consensus 656 ~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~ 735 (1470)
T PLN03140 656 VFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWM 735 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998886
Q ss_pred cc-ccCCccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeccccccccccccCCcc
Q 000523 723 KF-TQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1445)
Q Consensus 723 ~~-~~~~~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1445)
+. +.+...+.|..+|+.+|+.....|+|++++++++|+++|+++++++|+|.++.......+..+..............
T Consensus 736 ~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 815 (1470)
T PLN03140 736 NKMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPR 815 (1470)
T ss_pred CcccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhcccccccc
Confidence 43 22335678999999999998889999999999999999999999999999876665554432211100000000000
Q ss_pred ccccCCCCC---Ccc--cccccc-c-hhhhhhhhhcCCCCCCCCcccCCCceeEEecceeeeecchhhhhccccCCceEE
Q 000523 802 QLSTLGGST---DDI--RGQQSS-S-QSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVL 874 (1445)
Q Consensus 802 ~~~~~~~~~---~~~--~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 874 (1445)
......... ... +..... . ..............++++.+|+.|..++|+|++|.++.+.+++..+...+++.+
T Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~i 895 (1470)
T PLN03140 816 SLSSADGNNTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQL 895 (1470)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceE
Confidence 000000000 000 000000 0 000000000112234566778899999999999999988765544444556789
Q ss_pred eecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHH
Q 000523 875 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLL 954 (1445)
Q Consensus 875 L~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~ 954 (1445)
|+|||+.++|||++|||||||||||||||+|+|+.+++..+|+|.+||.+..+..+++.+|||+|+|.+++.+||+|+|.
T Consensus 896 L~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~ 975 (1470)
T PLN03140 896 LREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLI 975 (1470)
T ss_pred eeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHH
Confidence 99999999999999999999999999999999998777789999999988765556778999999999999999999999
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000523 955 FSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1034 (1445)
Q Consensus 955 f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~ 1034 (1445)
|++.+|.+.+.+.+++++.++++++.++|.++.|+.+|.+++++|||||||||+||++|+.+|+||||||||+|||+.++
T Consensus 976 ~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a 1055 (1470)
T PLN03140 976 YSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1055 (1470)
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Confidence 99988876666666777889999999999999999999988899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCCCchhhHHHHHHhCCCcccCCCCCCccceE
Q 000523 1035 AIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATWM 1114 (1445)
Q Consensus 1035 ~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~ 1114 (1445)
..+++.|++++++|+|||||+|||+.++++.||++++|++||+++|+||.+++++++++||++++|+++||+++||||||
T Consensus 1056 ~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~ 1135 (1470)
T PLN03140 1056 AIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWM 1135 (1470)
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhh
Confidence 99999999999889999999999998899999999999988999999999999999999999998888899999999999
Q ss_pred EEeccchhhhhhcccHHHHHhhcHHHHHHHHHHHhhCCCCCCCCCCCCCCccCCcHHHHHHHHHHHHHHHhhcChhHHHH
Q 000523 1115 LEVSAASQELALGIDFTEHYKRSDLYRRNKALIEDLSRPPPGSKDLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAV 1194 (1445)
Q Consensus 1115 l~v~~~~~~~~~~~d~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~ 1194 (1445)
||+++.+.+...+.||++.|++|++++++++.+++++.+.++.++..++++|++|+|+|++.|+||+++++||||.|+.+
T Consensus 1136 l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~ 1215 (1470)
T PLN03140 1136 LEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLV 1215 (1470)
T ss_pred hhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHH
Confidence 99998766666667999999999999999888888877766666666678899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCCCCCHhhHHHHHhHHHHHHHHHHHHhhhhcchhhhhhhhHHHhhhcCCCCChHHHHHHH
Q 000523 1195 RFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQ 1274 (1445)
Q Consensus 1195 r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~ 1274 (1445)
|+++++++|+++|++||+++++..+.+|+++++|++|++++|+++.++++++|++..||+||+|||++|+|++.+|++|+
T Consensus 1216 r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~ 1295 (1470)
T PLN03140 1216 RFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQ 1295 (1470)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHH
Confidence 99999999999999999999887778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccc
Q 000523 1275 VMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIFFMYFTLLFFTFYGMMAVALTPNHHIAAIVSTLFYGLWNVFSGF 1354 (1445)
Q Consensus 1275 ~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~f~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf 1354 (1445)
+++|+|+.++++++|++|+|||+||++++++||||+++++++.++++++|+++++++||.++|+.++++++++|++|+||
T Consensus 1296 ~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf 1375 (1470)
T PLN03140 1296 VVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGF 1375 (1470)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCccchhhhhhcccHHHHHHHHHHHHHhCCCcccccCCC----CcHHHHHHhhcCCccCchhHHHHHHHHHHHHHH
Q 000523 1355 IIPRPRIPIWWRWYYWANPIAWTLYGLVASQFGDMDDKKMDTG----ETVKQFLKDYFDFKHDFLGVVAAVLVVFAVLFG 1430 (1445)
Q Consensus 1355 ~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~~~~~~g----~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~ 1430 (1445)
++|+++||+||+|+||+||++|+++|+++|||+|.+.+|+++| .++++|++++|||+++++|++++++++|+++|+
T Consensus 1376 ~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~ 1455 (1470)
T PLN03140 1376 FIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVFFA 1455 (1470)
T ss_pred ccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHHHH
Confidence 9999999999999999999999999999999999988776554 689999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCC
Q 000523 1431 FLFALGIKMFNFQRR 1445 (1445)
Q Consensus 1431 ~~~~~~l~~~~~~~r 1445 (1445)
+++++++|++|||||
T Consensus 1456 ~~~~~~~~~~~~q~r 1470 (1470)
T PLN03140 1456 FIFAFCIRTLNFQTR 1470 (1470)
T ss_pred HHHHHHHHHhhcccC
Confidence 999999999999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.1e-186 Score=1878.44 Aligned_cols=1287 Identities=31% Similarity=0.529 Sum_probs=1061.8
Q ss_pred cchHHHHHHHHHHHhhcCCCCC--cceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhhcCCccccceeeecc
Q 000523 94 VDNERFLLKLKNRIDRVGIDLP--KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDV 171 (1445)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 171 (1445)
-|++++++.++++.++.+...| +++|+|+||+|++ ...+...+||+.|.+.+.+..+...+. ..+++++++||+||
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 4567777765555555555555 9999999999999 445666789999998887765443331 12344567899999
Q ss_pred eeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC-CceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCHHHHHH
Q 000523 172 SGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL-KVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTVRETLA 248 (1445)
Q Consensus 172 s~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1445)
|+.++|||+++|+||||||||||||+|+|+.++.. ..+|+|.+||+++++.. .++.++||+|+|.|++.+||+|||.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 99999999999999999999999999999974211 24999999999875432 2456999999999999999999999
Q ss_pred HhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhh
Q 000523 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1445)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1445)
|+++++.+..+.... .+. +..+..++.+++.+||++++||.||++.+++|||||
T Consensus 161 f~~~~~~~~~~~~~~---~~~-----------------------~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPDGV---SRE-----------------------EYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCCCC---CHH-----------------------HHHHHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 998776422110000 000 001123567899999999999999999999999999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecC
Q 000523 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1445)
Q Consensus 329 rqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~ 408 (1445)
||||+||++|+.+|++++|||||+|||+.++.++++.|+++++..+.|+|+++|||+++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999998875578999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCcccc---
Q 000523 409 RELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKS--- 485 (1445)
Q Consensus 409 ~~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 485 (1445)
++++.+||+++||.||++.|+|||+.+++++.++ +++...+. ....++++++++|++++.++++.+++..+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~~e~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPGYEK-KVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hccccccc-cCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999987542 33222111 123578999999999987776666554321110
Q ss_pred ------------cccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccc
Q 000523 486 ------------KSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTD 553 (1445)
Q Consensus 486 ------------~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~ 553 (1445)
...+.......|..++++|+++|++|+++.++||+..++.++++.+++|+++|++|++.+.+ ..+
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~---~~~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKN---TSD 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC---chh
Confidence 00011223346888999999999999999999999999999999999999999999976543 234
Q ss_pred cchhhHHHHHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCch
Q 000523 554 GGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNA 633 (1445)
Q Consensus 554 ~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~ 633 (1445)
.+.+.|++||++++.++.++.++..++.+|++|+|||..++|++++|++|+.+.++|+.++.+++|++|+|||+|+.+++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 56778999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHH
Q 000523 634 GRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVA 713 (1445)
Q Consensus 634 ~rff~~~~~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~ 713 (1445)
++||.+++++++...++++++++++++++++.+|+.+++++++++++++||+++.++||+||+|++|+||++|++++++.
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCcccccc--c----------------------CCccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHHHHH
Q 000523 714 NEFLGHSWKKFT--Q----------------------DSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTL 769 (1445)
Q Consensus 714 nef~~~~~~~~~--~----------------------~~~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l 769 (1445)
|||.+..+.|.. | +.....|.++|+. ++.....|+|.+++++++|+++|.+++++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999998887741 1 0123578899985 34445678999999999999999999999
Q ss_pred HHHhcCCCCCCCcceeccccccccccccCCccccccCCCCCCccccccccchhhhhhhhhcCCCCCCCCcccC--CCcee
Q 000523 770 ALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPF--EPHSL 847 (1445)
Q Consensus 770 ~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l 847 (1445)
++.|.++.......+............... ..+......++..... ......+.+... .....|. ....+
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~e~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~l 760 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAKKAGE--TSASNKNDIEAGEVLG-----STDLTDESDDVN-DEKDMEKESGEDIF 760 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchhhccc--ccccccccccccccCC-----CCcccccccccc-ccccccccCCCceE
Confidence 999988654433322211100000000000 0000000000000000 000000000000 0000011 12347
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC-eEEEEEEEcCccCC
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYPKK 926 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~ 926 (1445)
+|+|++|.++.+ .+++.+|+|||+.++|||++|||||||||||||||+|+|+.+++ +.+|+|.+||.+..
T Consensus 761 ~~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~ 831 (1394)
T TIGR00956 761 HWRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD 831 (1394)
T ss_pred EEEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC
Confidence 899999987532 12457999999999999999999999999999999999997644 45799999999875
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000523 927 QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1006 (1445)
Q Consensus 927 ~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1006 (1445)
. .+++.+|||+|+|.+++.+||+|+|.|++.+|.+.+.+.++++++++++++.++|.++.|+.+|.++ .+||||||||
T Consensus 832 ~-~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~-~~LSgGqrqR 909 (1394)
T TIGR00956 832 S-SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPG-EGLNVEQRKR 909 (1394)
T ss_pred h-hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCC-CCCCHHHhhH
Confidence 3 4678899999999999999999999999998876656666777889999999999999999998764 3899999999
Q ss_pred HHHHHHHhhCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCC
Q 000523 1007 LTIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1085 (1445)
Q Consensus 1007 l~iA~~L~~~p~-illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~ 1085 (1445)
|+||+||+.+|+ ||||||||||||+.++..+++.|++++++|+|||+|+|||+..+++.||++++|++||+++|+|+.+
T Consensus 910 l~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~ 989 (1394)
T TIGR00956 910 LTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLG 989 (1394)
T ss_pred HHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCcc
Confidence 999999999997 9999999999999999999999999988899999999999977889999999999988999999999
Q ss_pred CchhhHHHHHHhCCCcccCCCCCCccceEEEeccchhhhhhcccHHHHHhhcHHHHHHHHHHHhhCCCCCCCC---CCCC
Q 000523 1086 RHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAASQELALGIDFTEHYKRSDLYRRNKALIEDLSRPPPGSK---DLYF 1162 (1445)
Q Consensus 1086 ~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~~~~~~~~d~~~~~~~S~~~~~~~~~~~~~~~~~~~~~---~~~~ 1162 (1445)
++++++++||+++ |.++||+++|||||+||+++.+.+.....||++.|++|+++++..+.++++..+..... +...
T Consensus 990 ~~~~~~~~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1068 (1394)
T TIGR00956 990 ENSHTIINYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDA 1068 (1394)
T ss_pred cccchHHHHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCcccccccc
Confidence 9999999999997 55679999999999999998654444456899999999998887766655443322111 1112
Q ss_pred CCccCCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCCCCCHhhHHHHHhHHHHHHHHHHHHhh
Q 000523 1163 PTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYC 1242 (1445)
Q Consensus 1163 ~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~ 1242 (1445)
.++|+.|+|+|++.|++|+++++||||.|+.+|+++++++|+++|++||++++ +++++++++|++|+++++.++.+
T Consensus 1069 ~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~~- 1144 (1394)
T TIGR00956 1069 LSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPLI- 1144 (1394)
T ss_pred ccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHHH-
Confidence 24689999999999999999999999999999999999999999999999986 57899999999999888877764
Q ss_pred hhcchhhhhhhhHH-HhhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhheecccCcccchhH-------HHHHHHHHH
Q 000523 1243 SSVQPIVSVERTVF-YREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAK-------FFWYIFFMY 1314 (1445)
Q Consensus 1243 ~~~~~~~~~er~v~-~rE~~~g~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~-------f~~f~~~~~ 1314 (1445)
.+.+|.+..||.+| +|||++|+|++.+|++|++++|+|+.++.+++|++|+|||+||++++.+ |++|+++++
T Consensus 1145 ~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~ 1224 (1394)
T TIGR00956 1145 QQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLST 1224 (1394)
T ss_pred HHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHH
Confidence 45567777788775 8999999999999999999999999999999999999999999988876 999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhcccHHHHHHHHHHHHHhCCCccccc
Q 000523 1315 FTLLFFTFYGMMAVALTPNHHIAAIVSTLFYGLWNVFSGFIIPRPRIPIWWRWYYWANPIAWTLYGLVASQFGDMDDKKM 1394 (1445)
Q Consensus 1315 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~~~~ 1394 (1445)
++.++++++|+++++++||.++|+.+++++++++++||||++|+++||.||+|+||+||++|+++|++.|||+|.+..|.
T Consensus 1225 ~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~ 1304 (1394)
T TIGR00956 1225 MFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCK 1304 (1394)
T ss_pred HHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887662
Q ss_pred C---------CCCcH--------------------------------HHHHHhhcCCccCchhHHHHHHHHHHHHHHHHH
Q 000523 1395 D---------TGETV--------------------------------KQFLKDYFDFKHDFLGVVAAVLVVFAVLFGFLF 1433 (1445)
Q Consensus 1395 ~---------~g~~~--------------------------------~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~ 1433 (1445)
. +|+|| .+|+. .+|+++++.|+|++++++|++++ +++
T Consensus 1305 ~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~-~~~~~~~~~w~~~~i~~~~~~~~-~~~ 1382 (1394)
T TIGR00956 1305 VKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLE-PISSKYSGRWRNFGIFIAFIFFN-IIA 1382 (1394)
T ss_pred ccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHH-HcCCcccccccchhhhhHHHHHH-HHH
Confidence 1 23344 44544 57899999999999999999999 777
Q ss_pred HHHHHhh
Q 000523 1434 ALGIKMF 1440 (1445)
Q Consensus 1434 ~~~l~~~ 1440 (1445)
++++.++
T Consensus 1383 ~~~l~~~ 1389 (1394)
T TIGR00956 1383 TVFFYWL 1389 (1394)
T ss_pred HHhhheE
Confidence 7888775
No 4
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=7.4e-95 Score=920.44 Aligned_cols=564 Identities=29% Similarity=0.502 Sum_probs=500.5
Q ss_pred ceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCH
Q 000523 871 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYPKKQETFARISGYCEQNDIHSPFVTI 949 (1445)
Q Consensus 871 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv 949 (1445)
++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+||
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV 116 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTV 116 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcH
Confidence 467999999999999999999999999999999999987643 3589999999987666677889999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC-CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000523 950 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1445)
Q Consensus 950 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~-~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsg 1028 (1445)
+||+.|++.++.+.+...+++++.++++++.+||.+++|+.+|.++ .++|||||||||+||+||+++|+++||||||+|
T Consensus 117 ~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsg 196 (617)
T TIGR00955 117 REHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSG 196 (617)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcc
Confidence 9999999999887766777778889999999999999999999764 578999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCCCchhhHHHHHHhCCCcccCCCCC
Q 000523 1029 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGY 1108 (1445)
Q Consensus 1029 LD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~ 1108 (1445)
||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|+||. +++.+||+++| . +||++.
T Consensus 197 LD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~g-~-~~p~~~ 269 (617)
T TIGR00955 197 LDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDLG-H-PCPENY 269 (617)
T ss_pred hhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHcC-C-CCCCCC
Confidence 999999999999999988899999999999988999999999998 5899999997 68999999995 3 699999
Q ss_pred CccceEEEeccchhhhh-----hcccHHHHHhhcHHHHHHHHHHHhhCCCCCC---CCCCCCCCccCCcHHHHHHHHHHH
Q 000523 1109 NPATWMLEVSAASQELA-----LGIDFTEHYKRSDLYRRNKALIEDLSRPPPG---SKDLYFPTQFSQSSWIQFVACLWK 1180 (1445)
Q Consensus 1109 npad~~l~v~~~~~~~~-----~~~d~~~~~~~S~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Q~~~l~~R 1180 (1445)
|||||++|+++...+.. ...++.+.|++|+.+++..+.......+.++ .......++|..+++.|+..|++|
T Consensus 270 n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R 349 (617)
T TIGR00955 270 NPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKR 349 (617)
T ss_pred ChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHHH
Confidence 99999999987543211 1135677788887776655443322111111 111112346788999999999999
Q ss_pred HHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCCCCCHhhHHHHHhHHHHHHHHHHHHhhhhcchhhhhhhhHHHhhh
Q 000523 1181 QHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVSVERTVFYREK 1260 (1445)
Q Consensus 1181 ~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~ 1260 (1445)
+++++||||.+..+|+++++++|+++|++||++++ ++++++++.|++|++++++++.++..+.+.++.||.+|+||+
T Consensus 350 ~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~ 426 (617)
T TIGR00955 350 SWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRET 426 (617)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999985 468899999999999999999888888899999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhhhhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 000523 1261 AAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIFFMYFTLLFFTFYGMMAVALTPNHHIAAIV 1340 (1445)
Q Consensus 1261 ~~g~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~f~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~ 1340 (1445)
.+|+|++.+|++|++++|+|+.++.+++|++|+|||+|+++++.+||.|+++++++.++++++|+++++++|+..+|+.+
T Consensus 427 ~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~ 506 (617)
T TIGR00955 427 RSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALTV 506 (617)
T ss_pred cCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCCccchhhhhhcccHHHHHHHHHHHHHhCCCcc-cccCC---C---CcHHHHHHhhcCCccC
Q 000523 1341 STLFYGLWNVFSGFIIPRPRIPIWWRWYYWANPIAWTLYGLVASQFGDMDD-KKMDT---G---ETVKQFLKDYFDFKHD 1413 (1445)
Q Consensus 1341 ~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~-~~~~~---g---~~~~~~~~~~~g~~~~ 1413 (1445)
+++++.++++|+||+++.++||+||+|++|+||++|++++++.|||++.+. +|..+ + .++ +++.+.||++.+
T Consensus 507 ~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g-~~~l~~~g~~~~ 585 (617)
T TIGR00955 507 GPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSG-EVILETLSFRNA 585 (617)
T ss_pred HHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcCh-HHHHHhcCCCcc
Confidence 999999999999999999999999999999999999999999999998775 45311 1 134 566678999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 000523 1414 FLGVVAAVLVVFAVLFGFLFALGIKMFNFQRR 1445 (1445)
Q Consensus 1414 ~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1445 (1445)
+.|.+++++++|+++|+++++++|++....+|
T Consensus 586 ~~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 586 DLYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999998766655
No 5
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.4e-95 Score=909.72 Aligned_cols=576 Identities=32% Similarity=0.577 Sum_probs=505.3
Q ss_pred CCceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC-eEEEEEEEc
Q 000523 843 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITIS 921 (1445)
Q Consensus 843 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~ 921 (1445)
.+..+.|+|+++....+.. ..+++|+||||.++|||++|||||||||||||||+|+|+..++ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 3557899999988764321 3468999999999999999999999999999999999998764 789999999
Q ss_pred CccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 922 GYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 922 g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
|++.+.+.+++.+|||+|+|.+.|++||+|+|.|+|.+|++.+.+.++++++|+++++.+||.+++|+++|+++.+|+||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 98888888999999999999999999999999999999999988899999999999999999999999999998899999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
||||||+||.+|+.||+||||||||||||+.++..++++|+++|++|+|||||+|||+.+++++||++++|.+ |+++|+
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996 699999
Q ss_pred cCCCCchhhHHHHHHhCCCcccCCCCCCccceEEEeccch-hhhhhcccHHHH------HhhcHHHHHHH-HHHHhhCCC
Q 000523 1082 GPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAAS-QELALGIDFTEH------YKRSDLYRRNK-ALIEDLSRP 1153 (1445)
Q Consensus 1082 G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~-~~~~~~~d~~~~------~~~S~~~~~~~-~~~~~~~~~ 1153 (1445)
|+. +++.+||+++| . +||+++|||||++|+.+.. ..... .+..+. ++..+...+.. ...+.+...
T Consensus 253 G~~----~~~~~ff~~~G-~-~~P~~~Npadf~l~l~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (613)
T KOG0061|consen 253 GSP----RELLEFFSSLG-F-PCPELENPADFLLDLLSVDSGTREL-EEAVRIAKLINKFSQTDNLKKTLEALEKSLSTS 325 (613)
T ss_pred cCH----HHHHHHHHhCC-C-CCCCcCChHHHHHHHHccCCCchhH-HhHHHHHHHhhhccccchhhhhHHHHhhhcccc
Confidence 997 68999999995 4 5999999999999998842 11000 011111 11011111111 001111111
Q ss_pred CCCCCCCCCCCccCCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCCCCCHhhHHHHHhHHHHH
Q 000523 1154 PPGSKDLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTA 1233 (1445)
Q Consensus 1154 ~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~ 1233 (1445)
+ ..+.....+||.|++.+++|.+++.+|||.+...|+++.+++|+++|++||++++ +..+++++.|++|+.
T Consensus 326 ----~--~~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~ 396 (613)
T KOG0061|consen 326 ----K--KVEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFI 396 (613)
T ss_pred ----c--ccccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHH
Confidence 1 1111127899999999999999999999999999999999999999999999975 456777999999999
Q ss_pred HHHHHHHhhhhcchhhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhheecccCcccchhHHHHHHHHH
Q 000523 1234 VLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIFFM 1313 (1445)
Q Consensus 1234 ~~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~f~~~~ 1313 (1445)
+.+..+..+...++.++.||++|.||+.+|+|+.++|++|+.++++|+.++.+++|.+|+|||+|++++..+|++|++++
T Consensus 397 ~~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~ 476 (613)
T KOG0061|consen 397 LSFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLII 476 (613)
T ss_pred HHHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHH
Confidence 99998888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhcccHHHHHHHHHHHHHhCCCcccc
Q 000523 1314 YFTLLFFTFYGMMAVALTPNHHIAAIVSTLFYGLWNVFSGFIIPRPRIPIWWRWYYWANPIAWTLYGLVASQFGDMDDKK 1393 (1445)
Q Consensus 1314 ~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~~~ 1393 (1445)
++..+.++++|++++++.||...|..++++++..+++|+||+++.++||.||+|++|+|+++|++||++.|||++....|
T Consensus 477 ~~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~ 556 (613)
T KOG0061|consen 477 LLSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRC 556 (613)
T ss_pred HHHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998733333
Q ss_pred c-----CCCCcHHHHHHhhcCCccCchhHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 000523 1394 M-----DTGETVKQFLKDYFDFKHDFLGVVAAVLVVFAVLFGFLFALGIKMFNFQR 1444 (1445)
Q Consensus 1394 ~-----~~g~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~ 1444 (1445)
. +...++.++++ +++++.++.|.++.+++++.++|++++++++++.-..+
T Consensus 557 ~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~ 611 (613)
T KOG0061|consen 557 FLSGNLCCESTGEDVLK-QLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRK 611 (613)
T ss_pred ccCcCCcccccHHHHHH-hcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 1 12345666665 58999999999999999999999999999999765443
No 6
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=2.2e-94 Score=913.85 Aligned_cols=582 Identities=24% Similarity=0.410 Sum_probs=485.4
Q ss_pred CCceeEEecceeeeecchhhh--------------hcc--ccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHh
Q 000523 843 EPHSLTFDEVVYSVDMPEEMK--------------VQG--VLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLA 906 (1445)
Q Consensus 843 ~~~~l~~~~~~~~~~~~~~~~--------------~~~--~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~ 906 (1445)
.+..+.|.+++|++....... ..+ ...+++.+|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 357899999999986542100 000 1123467999999999999999999999999999999999
Q ss_pred CCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc
Q 000523 907 GRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL 986 (1445)
Q Consensus 907 g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~ 986 (1445)
|+.+++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+...+.++++++++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876544689999999886532 345689999999999999999999999887765555566667789999999999999
Q ss_pred ccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhh
Q 000523 987 RQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 1066 (1445)
Q Consensus 987 ~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~f 1066 (1445)
.|+.+|+...++||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999987788999999999999999999999999999999999999999999999998889999999999997799999
Q ss_pred ceEeEEecCcEEEEEcCCCCchhhHHHHHHhCCCcccCCCCCCccceEEEeccchhhh------h---hcccHHHHHhhc
Q 000523 1067 DELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKDGYNPATWMLEVSAASQEL------A---LGIDFTEHYKRS 1137 (1445)
Q Consensus 1067 D~v~~l~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~~~~------~---~~~d~~~~~~~S 1137 (1445)
|++++|++ |+++|.|+. +++++||+++| . +||+++|||||++|+++...+. . ...+..+.|+++
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~G-~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESVG-F-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHCC-C-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999985 799999997 68999999995 3 6999999999999998753210 0 001233455432
Q ss_pred HHHHHHHHHHHh--hCC-CCC-----CCCCCC-CCCccCCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHH
Q 000523 1138 DLYRRNKALIED--LSR-PPP-----GSKDLY-FPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGS 1208 (1445)
Q Consensus 1138 ~~~~~~~~~~~~--~~~-~~~-----~~~~~~-~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~ 1208 (1445)
. .+...+.++. ... +.+ ..+... ..+.+..+||+|+++|++|++++ |||+.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 1111111111 111 000 000000 11235578999999999999988 99999999999999999999999
Q ss_pred hhccCCCCCCCHhhHHHHHhHHHHHHHHHHHHhhhhcchhhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHhh
Q 000523 1209 LFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVV 1288 (1445)
Q Consensus 1209 ~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~~l~eiP~~~~~~~~ 1288 (1445)
+||+++ ..+++++.|++|+++++.++.+++++++.++.||+||+||+.+|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999984 467999999999999999988888888999999999999999999999999999999999999999999
Q ss_pred hhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhh
Q 000523 1289 YGAIVYAMIGFEWTAAKFFWYIFFMYFTLLFFTFYGMMAVALTPNHHIAAIVSTLFYGLWNVFSGFIIPRPRIPIWWRWY 1368 (1445)
Q Consensus 1289 ~~~i~Y~~~g~~~~~~~f~~f~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~ 1368 (1445)
|++|+|||+||++++.+||+|+++++++.++++++|+++++++||.++|+.++++++.++++||||+++ +||+||+|+
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~ 578 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWI 578 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799999999
Q ss_pred hcccHHHHHHHHHHHHHhCCCcc-----cccCC-C--CcHHHHHHhhcCCccCchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 000523 1369 YWANPIAWTLYGLVASQFGDMDD-----KKMDT-G--ETVKQFLKDYFDFKHDFLGVVAAVLVVFAVLFGFLFALGIKMF 1440 (1445)
Q Consensus 1369 ~~~sp~~y~~~~l~~~~~~~~~~-----~~~~~-g--~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~ 1440 (1445)
+|+||++|++++++.|||++.+. +|+.+ + .....++. ..++++...|.++++|++|+++|+++++++|+++
T Consensus 579 ~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~~ 657 (659)
T PLN03211 579 KYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE-EDVAGQISPATSVSVLIFMFVGYRLLAYLALRRI 657 (659)
T ss_pred HHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch-hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999987543 34311 0 01112222 2344455689999999999999999999999988
Q ss_pred cc
Q 000523 1441 NF 1442 (1445)
Q Consensus 1441 ~~ 1442 (1445)
||
T Consensus 658 ~~ 659 (659)
T PLN03211 658 KH 659 (659)
T ss_pred cC
Confidence 76
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=5.2e-92 Score=954.73 Aligned_cols=562 Identities=25% Similarity=0.414 Sum_probs=496.4
Q ss_pred CceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC--CeEEEEEEEcCccCCc--ccccceEEEeccCCCCCC
Q 000523 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGNITISGYPKKQ--ETFARISGYCEQNDIHSP 945 (1445)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~ 945 (1445)
.++.+|+|||+.++|||+++|+||||||||||||+|+|+..+ .+.+|+|.+||.+..+ ..+++.++|++|+|.|++
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 456799999999999999999999999999999999998632 2468999999987643 234567999999999999
Q ss_pred CCCHHHHHHHHHHhcCCC----CCCHHHHHH-HHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEE
Q 000523 946 FVTIYESLLFSAWLRLSP----EVDSETRKM-FIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1020 (1445)
Q Consensus 946 ~lTv~E~l~f~~~lr~~~----~~~~~~~~~-~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~il 1020 (1445)
.+||+|+|.|++.++.+. ..+.+++++ .++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|+|+
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 999999999998887643 223344333 357789999999999999999888999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCCCchhhHHHHHHhCC
Q 000523 1021 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIP 1099 (1445)
Q Consensus 1021 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~~~~~~~~~yF~~~~ 1099 (1445)
||||||+|||+.++..+++.|++++++ |+|||+++|||+.++++.||++++|++ |+++|+||. +++++||+++|
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~lG 306 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKMG 306 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHcC
Confidence 999999999999999999999999874 999999999998889999999999986 799999997 68999999995
Q ss_pred CcccCCCCCCccceEEEeccchhhh----------hhcccHHHHHhhcHHHHHHHHHHHhhCCCC---------------
Q 000523 1100 GVQKIKDGYNPATWMLEVSAASQEL----------ALGIDFTEHYKRSDLYRRNKALIEDLSRPP--------------- 1154 (1445)
Q Consensus 1100 g~~~~~~~~npad~~l~v~~~~~~~----------~~~~d~~~~~~~S~~~~~~~~~~~~~~~~~--------------- 1154 (1445)
. +||+++|||||++|+++++... ....||++.|++|+.+++..+.+++.....
T Consensus 307 -~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (1394)
T TIGR00956 307 -F-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVA 384 (1394)
T ss_pred -C-CCCCCCChHHHHHhccChhhhhccccccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHh
Confidence 4 6999999999999998864311 123479999999999887766554322110
Q ss_pred CCCCCCCCCCccCCcHHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCCCCCHhhHHHHHhHHHHHH
Q 000523 1155 PGSKDLYFPTQFSQSSWIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTAV 1234 (1445)
Q Consensus 1155 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~ 1234 (1445)
..++.....+.|..|+|+|+++|++|+++++||||.++.+|+++++++|+++|++||++++ ++++++++.|++|+++
T Consensus 385 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~ 461 (1394)
T TIGR00956 385 KQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAI 461 (1394)
T ss_pred hhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHH
Confidence 0011122334688999999999999999999999999999999999999999999999985 4678999999999999
Q ss_pred HHHHHHhhhhcchhhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhheecccCcccchhHHHHHHHHHH
Q 000523 1235 LFLGVQYCSSVQPIVSVERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIFFMY 1314 (1445)
Q Consensus 1235 ~~~~~~~~~~~~~~~~~er~v~~rE~~~g~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~f~~~~~ 1314 (1445)
++.++.++..+ +.+..||+||+|||.+|+|++++|++|++++|+|+.++.+++|++|+|||+||++++++||.|+++++
T Consensus 462 ~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~ 540 (1394)
T TIGR00956 462 LFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILF 540 (1394)
T ss_pred HHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHH
Confidence 99999887776 44557999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhcccHHHHHHHHHHHHHhCCCccccc
Q 000523 1315 FTLLFFTFYGMMAVALTPNHHIAAIVSTLFYGLWNVFSGFIIPRPRIPIWWRWYYWANPIAWTLYGLVASQFGDMDDKKM 1394 (1445)
Q Consensus 1315 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~~~~ 1394 (1445)
++.++++++|+++++++||..+|+.++++++.++++|+||++|+++||+||+|++|+||++|+++|++.|||++.+.+|.
T Consensus 541 l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~ 620 (1394)
T TIGR00956 541 ICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECS 620 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998887663
Q ss_pred ------------------C------CC---CcHHHHHHhhcCCccCchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000523 1395 ------------------D------TG---ETVKQFLKDYFDFKHDFLGVVAAVLVVFAVLFGFLFALGIKMFNF 1442 (1445)
Q Consensus 1395 ------------------~------~g---~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1442 (1445)
| +| .++.+|+...|||+++++|+|++|+++|+++|++++++++++++.
T Consensus 621 ~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 621 QYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred ccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 0 11 256799988899999999999999999999999999999999873
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=7.6e-91 Score=937.84 Aligned_cols=592 Identities=24% Similarity=0.402 Sum_probs=501.0
Q ss_pred cCCCceeEEecceeeeec-------chhh----------h-hcc---ccCCceEEeecceEEeeCCcEEEEEcCCCCChH
Q 000523 841 PFEPHSLTFDEVVYSVDM-------PEEM----------K-VQG---VLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKT 899 (1445)
Q Consensus 841 ~~~~~~l~~~~~~~~~~~-------~~~~----------~-~~~---~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKS 899 (1445)
+.+...+.|+|+++..+. |.-. . ..+ ..+.++.+|+|||+.|+|||+++|+||||||||
T Consensus 126 ~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKS 205 (1470)
T PLN03140 126 KLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKT 205 (1470)
T ss_pred CCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHH
Confidence 334567899999887652 1100 0 001 122356799999999999999999999999999
Q ss_pred HHHHhHhCCCCCC-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCC-------CCHHHH-
Q 000523 900 TLMDVLAGRKTGG-YITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPE-------VDSETR- 970 (1445)
Q Consensus 900 TLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~-------~~~~~~- 970 (1445)
||||+|+|+.++. ..+|+|.+||++..+...++.++||+|+|.|++.+||+|+|.|++.++.... ...+++
T Consensus 206 TLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~ 285 (1470)
T PLN03140 206 TLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKD 285 (1470)
T ss_pred HHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHh
Confidence 9999999987532 3589999999987554446789999999999999999999999988764211 111111
Q ss_pred -----------------------HHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000523 971 -----------------------KMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1027 (1445)
Q Consensus 971 -----------------------~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTs 1027 (1445)
+..++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|+++||||||+
T Consensus 286 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTs 365 (1470)
T PLN03140 286 AGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEIST 365 (1470)
T ss_pred ccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCc
Confidence 123578999999999999999998899999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCCCchhhHHHHHHhCCCcccCCC
Q 000523 1028 GLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQKIKD 1106 (1445)
Q Consensus 1028 gLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~ 1106 (1445)
|||+.++..+++.|+++++ .|+|||+++|||+.+++++||++++|++ |+++|+||. +++++||+++| . +||+
T Consensus 366 GLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G~ivy~G~~----~~~~~yF~~lG-f-~cP~ 438 (1470)
T PLN03140 366 GLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-GQIVYQGPR----DHILEFFESCG-F-KCPE 438 (1470)
T ss_pred CccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-ceEEEeCCH----HHHHHHHHHcC-C-CCCC
Confidence 9999999999999999986 5899999999998899999999999985 899999997 68999999995 4 6999
Q ss_pred CCCccceEEEeccchhh-h-----------hhcccHHHHHhhcHHHHHHHHHHHhhCCCCCCCCCCCCCCccCCcHHHHH
Q 000523 1107 GYNPATWMLEVSAASQE-L-----------ALGIDFTEHYKRSDLYRRNKALIEDLSRPPPGSKDLYFPTQFSQSSWIQF 1174 (1445)
Q Consensus 1107 ~~npad~~l~v~~~~~~-~-----------~~~~d~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~ 1174 (1445)
++|||||++|+++.... . ....+|++.|++|+.+++..+.++.-.......+.....++|..++|.|+
T Consensus 439 ~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~ 518 (1470)
T PLN03140 439 RKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELL 518 (1470)
T ss_pred CCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHH
Confidence 99999999999986432 1 11246899999999887765443321100011111112346889999999
Q ss_pred HHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCCCCCHhhHHHHHhHHHHHHHHHHHHhhhhcchhhhhhhh
Q 000523 1175 VACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVSVERT 1254 (1445)
Q Consensus 1175 ~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~ 1254 (1445)
+.|++|+++..||||.++..|+++.+++|+++|++||+++.+..+..+.+...|++||++++..++++..+ +.+..||+
T Consensus 519 ~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l-~~~~~~r~ 597 (1470)
T PLN03140 519 KACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAEL-ALMIQRLP 597 (1470)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccc
Confidence 99999999999999999999999999999999999999986654555677889999999998888776554 66778999
Q ss_pred HHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH
Q 000523 1255 VFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIFFMYFTLLFFTFYGMMAVALTPNH 1334 (1445)
Q Consensus 1255 v~~rE~~~g~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~f~~~~~~~~~~~~~~g~~~~~~~p~~ 1334 (1445)
||+|||.+++|++++|++|++++|+|+.++.+++|++|+|||+||++++++||.|+++++++.++++++++++++++|+.
T Consensus 598 vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~ 677 (1470)
T PLN03140 598 VFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTM 677 (1470)
T ss_pred hhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhcccHHHHHHHHHHHHHhCCCccc-ccCCC---CcHHHHHHhhcCC
Q 000523 1335 HIAAIVSTLFYGLWNVFSGFIIPRPRIPIWWRWYYWANPIAWTLYGLVASQFGDMDDK-KMDTG---ETVKQFLKDYFDF 1410 (1445)
Q Consensus 1335 ~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~~-~~~~g---~~~~~~~~~~~g~ 1410 (1445)
.+|+.++++++.++++|+||+||+++||+||+|++|+||++|+++|+++|||.+.... +.+++ .++.+|+ +.|||
T Consensus 678 ~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L-~~~g~ 756 (1470)
T PLN03140 678 IIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVL-NIFDV 756 (1470)
T ss_pred HHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHH-HhcCc
Confidence 9999999999999999999999999999999999999999999999999999776543 11122 2455666 78999
Q ss_pred ccC--chhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 000523 1411 KHD--FLGVVAAVLVVFAVLFGFLFALGIKMFN 1441 (1445)
Q Consensus 1411 ~~~--~~~~~~~il~~~~~~f~~~~~~~l~~~~ 1441 (1445)
+.+ +.|+++++|++|+++|++++++++++++
T Consensus 757 ~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~ 789 (1470)
T PLN03140 757 FTDKNWYWIGVGALLGFTILFNVLFTLALTYLN 789 (1470)
T ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 754 5699999999999999999999999987
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.2e-86 Score=829.59 Aligned_cols=563 Identities=26% Similarity=0.465 Sum_probs=502.8
Q ss_pred CceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC-eEEEEEEEcCccCCcccccceEEEeccCCCCCCCCC
Q 000523 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYPKKQETFARISGYCEQNDIHSPFVT 948 (1445)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lT 948 (1445)
.+.++|+|+|+.++||+++.++||+||||||||++|+|..+.. ...|+|.+||++.++..-++.++|++|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3457999999999999999999999999999999999975432 235799999999876545788999999999999999
Q ss_pred HHHHHHHHHHhcCCCC----CCHHHHH-HHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000523 949 IYESLLFSAWLRLSPE----VDSETRK-MFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1023 (1445)
Q Consensus 949 v~E~l~f~~~lr~~~~----~~~~~~~-~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLD 1023 (1445)
|+|+|.|+++++.+.. .++.++. +..+.+++.+||++|+|++||+...+|+||||||||+||.+++.+|+++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999998732 2222222 2578999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCCCchhhHHHHHHhCCCcc
Q 000523 1024 EPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRHSCHLISYFEAIPGVQ 1102 (1445)
Q Consensus 1024 EPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~~~~~~~~~yF~~~~g~~ 1102 (1445)
|+|+|||+.++.++.+.||++++ .+.|+++++|||+.+++++||+|++|.+ |++||+||. +++++||+++| .
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~G-f- 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDMG-F- 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhcC-c-
Confidence 99999999999999999999986 4889999999999999999999999996 899999998 68999999995 3
Q ss_pred cCCCCCCccceEEEeccchhhh-----------hhc-ccHHHHHhhcHHHHHHHHHHHhhCCCCCCCCCCCCCCccCCcH
Q 000523 1103 KIKDGYNPATWMLEVSAASQEL-----------ALG-IDFTEHYKRSDLYRRNKALIEDLSRPPPGSKDLYFPTQFSQSS 1170 (1445)
Q Consensus 1103 ~~~~~~npad~~l~v~~~~~~~-----------~~~-~d~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1170 (1445)
+||+..++|||+.+|++...+. ... .||++.|.+|+.+++....++.-......++.....++|..|+
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~ 438 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPY 438 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccH
Confidence 6999999999999999832211 111 4799999999999887654432211122333344456899999
Q ss_pred HHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhccCCCCCCCHhhHHHHHhHHHHHHHHHHHHhhhhcchhhh
Q 000523 1171 WIQFVACLWKQHWSYWRNPPYTAVRFFFTAFIALLFGSLFWDLGGRTKRNQDLFNAMGSMFTAVLFLGVQYCSSVQPIVS 1250 (1445)
Q Consensus 1171 ~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~ 1250 (1445)
|.|++.|+.|.++.+.||..|...++++.+++|+++|++|++... ++..+.+.+.|++||++++..++++..+ +...
T Consensus 439 ~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~ 515 (1391)
T KOG0065|consen 439 WEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTF 515 (1391)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHH
Confidence 999999999999999999999999999999999999999999982 5677899999999999999999888887 4456
Q ss_pred hhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhhheecccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000523 1251 VERTVFYREKAAGMYAGIPWALAQVMIEIPYILVQSVVYGAIVYAMIGFEWTAAKFFWYIFFMYFTLLFFTFYGMMAVAL 1330 (1445)
Q Consensus 1251 ~er~v~~rE~~~g~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~f~~~~~~~~~~~~~~g~~~~~~ 1330 (1445)
+.|+||+|||...+|+++||.++..+.++|+.++.+++|.+|+||++||.+++++||.|+++++++..|+++++++++++
T Consensus 516 ~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l 595 (1391)
T KOG0065|consen 516 QRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASL 595 (1391)
T ss_pred hhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhcccHHHHHHHHHHHHHhCCCcccccC---------------
Q 000523 1331 TPNHHIAAIVSTLFYGLWNVFSGFIIPRPRIPIWWRWYYWANPIAWTLYGLVASQFGDMDDKKMD--------------- 1395 (1445)
Q Consensus 1331 ~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~~~~~--------------- 1395 (1445)
+|+..+|+.++++.+....+++||+||.++||+||+|++|+||+.|++++++.|||++.+.+|.+
T Consensus 596 ~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c 675 (1391)
T KOG0065|consen 596 SRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVC 675 (1391)
T ss_pred cchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999888751
Q ss_pred ------CCC---cHHHHHHhhcCCccCchhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000523 1396 ------TGE---TVKQFLKDYFDFKHDFLGVVAAVLVVFAVLFGFLFALGIKMFNF 1442 (1445)
Q Consensus 1396 ------~g~---~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1442 (1445)
.|. .+.+|++..|+|++.|.|++++|++||.++|.+++.+++.|+|.
T Consensus 676 ~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p 731 (1391)
T KOG0065|consen 676 AATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKP 731 (1391)
T ss_pred hhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCc
Confidence 121 34678889999999999999999999999999999999999985
No 10
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.8e-79 Score=769.52 Aligned_cols=583 Identities=30% Similarity=0.497 Sum_probs=491.3
Q ss_pred CCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhhcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHH
Q 000523 114 LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTT 193 (1445)
Q Consensus 114 ~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 193 (1445)
...++++|+|++++.... .+ ..+++|+||||+++|||++||+||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~----------------------------~~-~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK----------------------------SK-KTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC----------------------------CC-ccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 356889999999997541 11 4567999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHc
Q 000523 194 LLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAA 273 (1445)
Q Consensus 194 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 273 (1445)
||++|+|+.++..+.+|+|++||++.+....++.+|||.|+|.+++++||+|++.|+++++-+.. .
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~------- 137 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------L------- 137 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------C-------
Confidence 99999999987667899999999887766678899999999999999999999999998875421 0
Q ss_pred CCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCC
Q 000523 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1445)
Q Consensus 274 ~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsg 353 (1445)
..++.+.++|++++.|||.+|+||+||+...|||||||||||+||..|+.+|+||||||||||
T Consensus 138 -----------------~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 138 -----------------SKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred -----------------CHHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 112345679999999999999999999988899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHH
Q 000523 354 LDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1445)
Q Consensus 354 LD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl 433 (1445)
||+.++.++++.|+++|+. ++|+|++||||+.+++++||++++|++|+++|+|+++++.+||+++|++||+..||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999985 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCch--hhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCcccccccccccccccccCcHHHHHHHHHHH
Q 000523 434 QEVTSRK--DQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISR 511 (1445)
Q Consensus 434 ~ev~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R 511 (1445)
.++.+.. .+..... ....+..+.++..+...+.......... + ..........++|.|+..+.+|
T Consensus 280 l~l~s~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~s~~~q~~~L~~R 346 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEA--------VRIAKLINKFSQTDNLKKTLEALEKSLS----T-SKKVEIGTSPSWWTQFKILLKR 346 (613)
T ss_pred HHHHccCCCchhHHhH--------HHHHHHhhhccccchhhhhHHHHhhhcc----c-ccccccccCCcHHHHHHHHHHH
Confidence 9987742 1110000 0000011111100000000000000000 0 0000111167899999999999
Q ss_pred HHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccchhhHHHHHHHHHHHHhHHH-HHHHHhhhchhHHHhh
Q 000523 512 ELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFS-EISMTIAKLPVFYKQR 590 (1445)
Q Consensus 512 ~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~-~l~~~~~~~~vf~kqr 590 (1445)
.+..+.|++..+..|.++.+++++++|++|++.+.... ......|++|+.+.+..+..+. .++.+..++++|.||+
T Consensus 347 ~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~---~~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~ 423 (613)
T KOG0061|consen 347 SLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAK---GIQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRET 423 (613)
T ss_pred HhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchH---HHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999998754332 2335678888888888666555 6889999999999999
Q ss_pred hcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 000523 591 DFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTF 670 (1445)
Q Consensus 591 ~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rff~~~~~~~~~~~~~~~l~~~ia~~~~~~~vA~~~ 670 (1445)
..++|+.++|++++.+.++|+.++.+++|.+++|||+|++++..+|+.+.++.++..+++.+++.++++..++...|.++
T Consensus 424 ~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~ 503 (613)
T KOG0061|consen 424 SSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSL 503 (613)
T ss_pred hcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHHhcCCccccccc--CCccccHHHHHhhcCccccchh
Q 000523 671 GSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQ--DSSETLGVQVLKSRGFFAHEYW 748 (1445)
Q Consensus 671 ~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~--~~~~~~G~~~L~~~g~~~~~~~ 748 (1445)
++++++.+++++||+++.++||.||+|+.|+|+++|++++++.|+|.+....|... ..+...|.++++..++.. ..
T Consensus 504 ~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~ 581 (613)
T KOG0061|consen 504 GPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFED--SS 581 (613)
T ss_pred HHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCcc--cc
Confidence 99999999999999999999999999999999999999999999999744444332 345677889999888754 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000523 749 YWLGLGALFGFVLLLNFAYTLALTFLD 775 (1445)
Q Consensus 749 ~w~~~g~l~~~~~~~~~~~~l~L~~l~ 775 (1445)
.|.++.++++++++|.++.+++|++..
T Consensus 582 ~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 582 FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 678999999999999999999998754
No 11
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=1.4e-78 Score=769.50 Aligned_cols=609 Identities=21% Similarity=0.325 Sum_probs=470.6
Q ss_pred CCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhhcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHH
Q 000523 114 LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTT 193 (1445)
Q Consensus 114 ~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKST 193 (1445)
.++++++|.|+++.+.......+...+ ...+..-. .......+..++++|+|+|++++|||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~~----~~~~~~~~-~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSNI----KRILGHKP-KISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCccccccc----cccccccc-ccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 457999999999997532101111100 00000000 0000111223467999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHc
Q 000523 194 LLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAA 273 (1445)
Q Consensus 194 LL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 273 (1445)
||++|+|+++|+ ..+|+|.+||+++... .++.++||+|++.+++.+||+||+.|++.++..... .
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~-------~------ 174 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSL-------T------ 174 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCC-------C------
Confidence 999999999874 3589999999987532 235699999999999999999999998765421100 0
Q ss_pred CCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCC
Q 000523 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTG 353 (1445)
Q Consensus 274 ~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsg 353 (1445)
.++...+++++++.+||++++||.||++..++|||||||||+||++|+.+|++|+|||||+|
T Consensus 175 ------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 175 ------------------KQEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred ------------------HHHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 01122356789999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHH
Q 000523 354 LDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1445)
Q Consensus 354 LD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl 433 (1445)
||+.++.++++.|+++++ .++|+|+++||+..+++++||+|++|++|+++|+|+.+++.+||+++||+||++.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999875 5788888888888789999999999999999999999999999999999999999999999
Q ss_pred HhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHhhcC---Cccccc-----cccc-ccccccccCcHHHH
Q 000523 434 QEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRT---PFDKSK-----SHRA-ALTTETYGVGKREL 504 (1445)
Q Consensus 434 ~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~-----~~~~-~l~~~~~~~~~~~~ 504 (1445)
.++++...+.......+.+ ...+++.+.|++... ++..++... ...... ..+. ......+..+++.|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998754321100000011 112334444432111 111111100 000000 0000 00112245679999
Q ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccchhhHHHHHHHHHHHH-hHHHHHHHHhhhc
Q 000523 505 LKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNF-NGFSEISMTIAKL 583 (1445)
Q Consensus 505 ~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~-~~~~~l~~~~~~~ 583 (1445)
+..+++|.++. +|+......|+++.+++|+++|++|++.+ ..+.+.+.|++||.+++.++ ..++.++.+..++
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888 78887788999999999999999999653 23456678999999877555 5567888889999
Q ss_pred hhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Q 000523 584 PVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRN 663 (1445)
Q Consensus 584 ~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rff~~~~~~~~~~~~~~~l~~~ia~~~~~ 663 (1445)
++|+|||..++|++++|++|+++.++|+.++.+++|++|+|||+|+++++++||.+++++++...++++++.++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHHhcCCcc-----cccccCCccccHHHHHh
Q 000523 664 MVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW-----KKFTQDSSETLGVQVLK 738 (1445)
Q Consensus 664 ~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~-----~~~~~~~~~~~G~~~L~ 738 (1445)
+.+|+.+++++++++++|+||+++ +||+||+|++|+||++|++++++.|||.+.+. .|..+......+..++.
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~ 623 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE 623 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch
Confidence 999999999999999999999997 79999999999999999999999999976542 34221110111112222
Q ss_pred hcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000523 739 SRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLD 775 (1445)
Q Consensus 739 ~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l~ 775 (1445)
...+. ....|.+++++++++++|+++.+++|++.+
T Consensus 624 ~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 624 EDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222 234788999999999999999999997653
No 12
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=9.3e-79 Score=773.08 Aligned_cols=569 Identities=25% Similarity=0.416 Sum_probs=481.1
Q ss_pred cccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCC
Q 000523 162 KRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEM 241 (1445)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1445)
+.++++|+|+|++++|||+++|+|||||||||||++|+|+.+++...+|+|.+||.+++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 34567999999999999999999999999999999999998875456899999999876544567899999999999999
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccc-
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM- 320 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~- 320 (1445)
||+|||.|+++++.+.... .++...+++++++.+||++++||.||+++
T Consensus 115 TV~e~l~f~~~~~~~~~~~-------------------------------~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRVT-------------------------------KKEKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCCC-------------------------------HHHHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 9999999998775321100 01123457889999999999999999864
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000523 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1445)
Q Consensus 321 ~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1445)
.++|||||||||+||++|+.+|++++|||||+|||+.++.++++.|+++++ .+.|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 689999999999999999999999999999999999999999999999875 5789999999999999999999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHhhcC
Q 000523 401 GQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRT 480 (1445)
Q Consensus 401 G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (1445)
|+++|+|+++++.+||+++||+||+..|++||+.++.+.....+. . .....+++.+.|++++..++..++...
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998764322110 0 112234566667666555444333221
Q ss_pred Cccccc---ccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccchh
Q 000523 481 PFDKSK---SHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIF 557 (1445)
Q Consensus 481 ~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~ 557 (1445)
...... ..........+..+++.|+..+++|.++..+||+..+..++++.+++++++|++|++.+.+. .+....
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~---~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQ---KGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCH---HHHHHH
Confidence 111000 00001122356788999999999999999999999999999999999999999999765432 344556
Q ss_pred hHHHHHHHHHHHHhHH-HHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCchHHH
Q 000523 558 AGATFFAITMVNFNGF-SEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRF 636 (1445)
Q Consensus 558 ~g~lff~~~~~~~~~~-~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rf 636 (1445)
.|++|+.++...+.++ ..+..+..++++|+|||..++|++++|++++.+.++|+.++.+++|.+++|||+|+++++++|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 7889999888777754 556777789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHHh
Q 000523 637 FKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEF 716 (1445)
Q Consensus 637 f~~~~~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef 716 (1445)
|.+++++++...++.+++.++++++++..+|..+++++++++++++||+++.++||+||+|++|+||++|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-cccccCC---ccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000523 717 LGHSW-KKFTQDS---SETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFL 774 (1445)
Q Consensus 717 ~~~~~-~~~~~~~---~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l 774 (1445)
.+..+ .|...+. +...|..+|+.+|+..+ +.|.++++++++.++|.++++++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98775 4432111 23458999999988654 458999999999999999999999874
No 13
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.9e-76 Score=740.41 Aligned_cols=836 Identities=22% Similarity=0.264 Sum_probs=454.4
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHH-hhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRI-DRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1445)
...++....+++++++..+. +...- ...-..-.+.+|+|+||++++.
T Consensus 314 f~~a~~aa~~I~~~i~~~~~-----i~~~~~~~~~~~~~~g~ief~nV~FsYP--------------------------- 361 (1228)
T KOG0055|consen 314 FAKARAAAYRIFETIDRKPS-----IDPYSKGGRVLSSIKGEIEFRNVCFSYP--------------------------- 361 (1228)
T ss_pred HhccccchHHHHHHhcCCCC-----CCcccccCCcccccccceEEEEEEecCC---------------------------
Confidence 56778888899998887766 32221 1112233578999999999973
Q ss_pred hcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcC
Q 000523 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1445)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1445)
++ ++..||+|+|+.|++|+.++|+|||||||||++++|.+.++|+ +|+|++||++++++.. +.++|.|+|
T Consensus 362 ---sR-pdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~Q 434 (1228)
T KOG0055|consen 362 ---SR-PDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQ 434 (1228)
T ss_pred ---CC-CcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeee
Confidence 22 3456999999999999999999999999999999999999999 9999999999988765 478999999
Q ss_pred CCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccc
Q 000523 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1445)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1445)
+|.+ +..||+||+.|+. ++...+...++++... ..--+..|++..|
T Consensus 435 ePvl-F~~tI~eNI~~G~----~dat~~~i~~a~k~an-----------------------------a~~fi~~lp~g~~ 480 (1228)
T KOG0055|consen 435 EPVL-FATTIRENIRYGK----PDATREEIEEAAKAAN-----------------------------AHDFILKLPDGYD 480 (1228)
T ss_pred chhh-hcccHHHHHhcCC----CcccHHHHHHHHHHcc-----------------------------HHHHHHhhHHhhc
Confidence 9855 5579999999974 1222233333333221 1122456889999
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcC
Q 000523 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1445)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1445)
|.||++++. ||||||||++|||||+.+|+|||||||||+||+.++..+.+.|++.. .++|+|+. .|. -++.+.+|
T Consensus 481 T~vge~g~q-LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTivV-aHR-LStIrnaD 555 (1228)
T KOG0055|consen 481 TLVGERGVQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIVV-AHR-LSTIRNAD 555 (1228)
T ss_pred ccccCCCCC-CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEEE-eee-hhhhhccC
Confidence 999998885 99999999999999999999999999999999999999999999864 45566663 344 44555599
Q ss_pred eEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHH--HhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhch--
Q 000523 394 DIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL--QEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFH-- 469 (1445)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl--~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 469 (1445)
+|++|++|+|++.|+|+|+++. ..-.++.. |+..+..+. ..+ +.. ..++.....+.+.
T Consensus 556 ~I~v~~~G~IvE~G~h~ELi~~----------~G~Y~~lv~~Q~~~~~~~~-~~~---~~~----~~~~~~~s~~~s~~~ 617 (1228)
T KOG0055|consen 556 KIAVMEEGKIVEQGTHDELIAL----------GGIYSSLVRLQELEKAAED-EEE---EES----LKEERSRSLKSSSSS 617 (1228)
T ss_pred EEEEEECCEEEEecCHHHHHhc----------cchHHHHHHHHhhhhhhhc-ccc---ccc----hhhhhhhcccccccc
Confidence 9999999999999999999862 11112221 222221110 000 000 0000000000000
Q ss_pred --hhhh-hHHhh--cCCcccccccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHH-------HHHHH
Q 000523 470 --VGQK-ISDEL--RTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAF-------VAVVY 537 (1445)
Q Consensus 470 --~~~~-~~~~l--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i-------~ali~ 537 (1445)
..+. ..... ..+.++....+. .......+.+ |-+...+.++.+.+.-.+..++ .+.++
T Consensus 618 ~~~~~~~~~~~~~~~~~~~e~~~~~~--~~~~~~~s~~--------~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~ 687 (1228)
T KOG0055|consen 618 PSLSRGSNRSNLLSVKPEGEDPEEPV--SEEDEKVSFW--------RIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVF 687 (1228)
T ss_pred ccccCCcccccccccccccccccccc--ccccccccHH--------HHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 0000 00000 000000000000 0011122333 3333333333333333332222 23333
Q ss_pred HHHHhcccC-CCccccccchhhHHHHHHHHHHHHhH--HHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHH
Q 000523 538 MTLFLRTKM-HKDTVTDGGIFAGATFFAITMVNFNG--FSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFL 614 (1445)
Q Consensus 538 gt~f~~~~~-~~~~~~~~~~~~g~lff~~~~~~~~~--~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~ 614 (1445)
+.++--... +.+..........++|.++....+.. +......+..-. +..++
T Consensus 688 s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~--------------------Lt~R~----- 742 (1228)
T KOG0055|consen 688 SQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEK--------------------LTKRL----- 742 (1228)
T ss_pred HHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------HHHHH-----
Confidence 332211111 11111111111223333222211110 000000000000 00000
Q ss_pred HHHHHHHHHHHhcCCCCc---hHHHHHHHHHHHH-----HHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH------HHH
Q 000523 615 EVAVWVFLSYYVVGYDSN---AGRFFKQYALLLG-----VNQMASALFRFIAVTGRNMVVANTFGSFALLV------LLS 680 (1445)
Q Consensus 615 ~~~i~~~i~Y~~~g~~~~---~~rff~~~~~~~~-----~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~------~~l 680 (1445)
-...|..+.+.-+++-.+ .++...++..... +..-.+.+...++++.-.+.+|..+++-+.++ ++.
T Consensus 743 R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~ 822 (1228)
T KOG0055|consen 743 RSMMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLI 822 (1228)
T ss_pred HHHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 011122222222222111 1333333221111 11112222333334444444454444433222 222
Q ss_pred HhhcccCccchhHHHHHHHHHcH---HHHHHHHHHHHHhcCCcccccccCCccccHHHHHhhcCc-----c--ccchhHH
Q 000523 681 LGGFILSREDIKKWWKWAYWCSP---LTYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGF-----F--AHEYWYW 750 (1445)
Q Consensus 681 ~~Gf~i~~~~ip~~~~W~~~isP---~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~g~-----~--~~~~~~w 750 (1445)
++++.-. +++.-.+. -.|.-.+.+++|-..+-.... .......+++.+.- . ......|
T Consensus 823 ~~~~~~~--------~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~----al~~e~~~~~~y~~~l~~p~~~~~~~~~i 890 (1228)
T KOG0055|consen 823 LSGYLQK--------KFLKGFSKDDKKAYEEASKIAIEAVSNIRTVA----ALCAEEKFMELYKEELEKPRKSSFKRGLI 890 (1228)
T ss_pred HHHHHHH--------HHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHH----HHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222110 00000000 001111111111111000000 00000111110000 0 0001123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeccccccccccccCCccccccCCCCCCccccccccchhhhhhhhh-
Q 000523 751 LGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSTDDIRGQQSSSQSLSLAEAE- 829 (1445)
Q Consensus 751 ~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 829 (1445)
.+++.-+...+ ..+.++++++|...+..............-..-..+............+-.+...+........+..
T Consensus 891 ~gl~f~~sqs~-~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~ 969 (1228)
T KOG0055|consen 891 SGLGFGFSQSL-LFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKP 969 (1228)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCC
Confidence 33322222211 1233444444432221111111000000000000000000000000000000000000000000000
Q ss_pred -cCCCCCCCCcccCCCceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCC
Q 000523 830 -ASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGR 908 (1445)
Q Consensus 830 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~ 908 (1445)
.+.....+...|.-...++++||++.|+.. ++.++|+|+|++|++|+.+||+|||||||||.+.+|-+.
T Consensus 970 ~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsR----------P~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRf 1039 (1228)
T KOG0055|consen 970 TIDPDSTSGGKLPNVKGDIEFRNVSFAYPTR----------PDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERF 1039 (1228)
T ss_pred CCCCCCCCCCccccceeEEEEeeeEeeCCCC----------CCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHh
Confidence 011111222334445679999999999754 346799999999999999999999999999999999976
Q ss_pred CCCCeEEEEEEEcCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc----
Q 000523 909 KTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELV---- 981 (1445)
Q Consensus 909 ~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l---- 981 (1445)
.+ +..|.|.|||.+++. ..+|+++|.|.|+|.+|. -|++||+.|+. .+++.++ +.++++.-
T Consensus 1040 Yd--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~-----~~vs~~e----Ii~Aak~ANaH~ 1107 (1228)
T KOG0055|consen 1040 YD--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS-----EEVSEEE----IIEAAKLANAHN 1107 (1228)
T ss_pred cC--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC-----CCCCHHH----HHHHHHHhhhHH
Confidence 65 568999999998765 457889999999999986 69999999981 1234333 33333332
Q ss_pred ---CCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCc
Q 000523 982 ---ELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQP 1058 (1445)
Q Consensus 982 ---~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqp 1058 (1445)
+|.+-.||.+|..|. .||||||||++||||+++||+||+|||.||.||+++.+.|+++|.+.. .|+|.|+++|++
T Consensus 1108 FI~sLP~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~IvIAHRL 1185 (1228)
T KOG0055|consen 1108 FISSLPQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTIVIAHRL 1185 (1228)
T ss_pred HHhcCcCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEEEEecch
Confidence 455667899998764 799999999999999999999999999999999999999999999874 589999999998
Q ss_pred cHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1059 SIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1059 s~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
| ....+|.+.++++ |+++..|.-
T Consensus 1186 S--TIqnaD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1186 S--TIQNADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred h--hhhcCCEEEEEEC-CEEEecccH
Confidence 7 4678999999985 899999974
No 14
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.6e-71 Score=719.23 Aligned_cols=814 Identities=20% Similarity=0.259 Sum_probs=457.5
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.-++..+++|+-+.+..+... .+...+.+.+.+...+.++|.+++=+.
T Consensus 483 ~vqa~VS~~Ri~~fl~~~e~~-----~~~~~~~~~~~~~~~i~i~~~sfsW~~--------------------------- 530 (1381)
T KOG0054|consen 483 LVQAKVSLKRLKEFLLSEELD-----PDSVERSPDEAGENAIEIKNGSFSWDS--------------------------- 530 (1381)
T ss_pred HHHHHHHHHHHHHHhcCcccC-----ccccccCCCCCCCceEEEeeeeEecCC---------------------------
Confidence 346788889988888765431 111122344455667888888877432
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNH 237 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~ 237 (1445)
....+.|+|||++|++|+++||+||.|||||+||.+|.|+++.. +|+|.++| .++||+|++ |
T Consensus 531 ----~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~p-W 592 (1381)
T KOG0054|consen 531 ----ESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQP-W 592 (1381)
T ss_pred ----CCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEecccc-H
Confidence 11223899999999999999999999999999999999999976 99999998 499999987 5
Q ss_pred CCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccc
Q 000523 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1445)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1445)
+.+.||||||.|+..+. .++|+.+.++|..+++.++.|++| .|.||
T Consensus 593 I~ngTvreNILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIG 638 (1381)
T KOG0054|consen 593 IQNGTVRENILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTEIG 638 (1381)
T ss_pred hhCCcHHHhhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cceec
Confidence 66679999999998764 478999999999999988888887 49999
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHH-HHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000523 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVN-CLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1445)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~-~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1445)
++++ +||||||||+++|||++++++|++||+|.|++|+++..+|++ +++.+. +++|+|+ ++| ..+....+|.|+
T Consensus 639 ErGi-nLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L--~~KT~IL-VTH-ql~~L~~ad~Ii 713 (1381)
T KOG0054|consen 639 ERGI-NLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLL--RGKTVIL-VTH-QLQFLPHADQII 713 (1381)
T ss_pred CCcc-CCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh--cCCEEEE-EeC-chhhhhhCCEEE
Confidence 9998 599999999999999999999999999999999999999995 775542 3455555 444 567888999999
Q ss_pred EecCCeEEEecChhHHHH---HHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhh
Q 000523 397 LLSDGQIVYQGPRELVLE---FFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQK 473 (1445)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (1445)
+|++|+|+..|+++|+.+ .|+++ . .+... ++... .....+.......+. +. +.......
T Consensus 714 vl~~G~I~~~Gty~el~~~~~~~~~l-~------------~~~~~--~~~~~-~~~~~~~~~~~~~~~-~~-~~~~~~~~ 775 (1381)
T KOG0054|consen 714 VLKDGKIVESGTYEELLKSGGDFAEL-A------------HEEES--EQEEE-ASEKDLESGESSRES-ES-RSLESLSS 775 (1381)
T ss_pred EecCCeEecccCHHHHHhcchhHHHH-h------------hccch--hhccc-cccccccccccccch-hh-hhhhhhcc
Confidence 999999999999999984 23322 0 00000 00000 000000000000000 00 00000000
Q ss_pred hHHhhcCCccccccccccccc---ccccCcHHHHHHHHHHHHHHHhhcchHHHHH--HHHHHHH-HHHHHHHHHhcccCC
Q 000523 474 ISDELRTPFDKSKSHRAALTT---ETYGVGKRELLKANISRELLLMKRNSFVYIF--KLIQIAF-VAVVYMTLFLRTKMH 547 (1445)
Q Consensus 474 ~~~~l~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~--~~~~~~i-~ali~gt~f~~~~~~ 547 (1445)
..++ ....+.. +..... ...+.-.|.-. ..+.... ..+.... -+..... +..+....|+..+.+
T Consensus 776 ~~~~--~~~~~~~--~~~~~~~ee~~~G~v~~~vY-----~~Y~~a~-~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~ 845 (1381)
T KOG0054|consen 776 EEEK--SKDEKEE--EDKLVQEEERETGKVSWSVY-----KKYIKAA-GGFLLVLLILLLFVLTQVLQIASNYWLSYWTD 845 (1381)
T ss_pred cccc--cccccch--hhHHHHHHHHhcCEeeHHHH-----HHHHHhc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0000 0000000 000000 00000011100 1111110 1111111 1111111 122223334333322
Q ss_pred Ccc---c--cccchhhH----HHHHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHH
Q 000523 548 KDT---V--TDGGIFAG----ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAV 618 (1445)
Q Consensus 548 ~~~---~--~~~~~~~g----~lff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i 618 (1445)
... . .+...+.+ ..+...++.++.++......+.....++. .+-+.+++.|++|+++
T Consensus 846 ~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~------------~ml~~Ilrapm~FFdt-- 911 (1381)
T KOG0054|consen 846 DGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHD------------KLLNSILRAPMSFFDT-- 911 (1381)
T ss_pred CcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHhCcchhcCC--
Confidence 211 0 11222221 11111122222222222222211111111 1345677888888764
Q ss_pred HHHHHHHhcCCCCchHHHHHHHHHHHHHH-----HHHHHHHH-HHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchh
Q 000523 619 WVFLSYYVVGYDSNAGRFFKQYALLLGVN-----QMASALFR-FIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIK 692 (1445)
Q Consensus 619 ~~~i~Y~~~g~~~~~~rff~~~~~~~~~~-----~~~~~l~~-~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip 692 (1445)
.+.||.+++|...+... .....+.. ++..++--.+++.....+++.+..+...
T Consensus 912 ------------TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~--------- 970 (1381)
T KOG0054|consen 912 ------------TPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVI--------- 970 (1381)
T ss_pred ------------CCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHH---------
Confidence 46789999887555431 11111111 1111111112222222222111111111
Q ss_pred HHHHHHHHHcHHHHHHHHHHHHHhcCCcccccccCC-ccccHHHHHhhcCccc--------------------cchhHHH
Q 000523 693 KWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQDS-SETLGVQVLKSRGFFA--------------------HEYWYWL 751 (1445)
Q Consensus 693 ~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~~~-~~~~G~~~L~~~g~~~--------------------~~~~~w~ 751 (1445)
||.--..|...+--.....+...++..... ....|...++.++-.. ...-.|+
T Consensus 971 ------~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWl 1044 (1381)
T KOG0054|consen 971 ------YYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWL 1044 (1381)
T ss_pred ------HHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 111111222222222222222111111000 0112333333332110 0111344
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHhcCCCCCCCcc--eeccccccccccc-cCCccccccCCCCCCccccccccchhhhhhh
Q 000523 752 GLGA-LFGFVLLLNFAYTLALTFLDPFEKPRAV--ITEEIESNEQDDR-IGGNVQLSTLGGSTDDIRGQQSSSQSLSLAE 827 (1445)
Q Consensus 752 ~~g~-l~~~~~~~~~~~~l~L~~l~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (1445)
++-. ++|..+++..+....+........+..- ++....-....+. .....+.+....+.+++.. .....
T Consensus 1045 a~Rle~ig~~~v~~~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~e-------Y~~~~ 1117 (1381)
T KOG0054|consen 1045 AVRLELLGNLVVLIAALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLE-------YTDIP 1117 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHH-------HhcCC
Confidence 4322 1112222211111111111100000000 0000000000000 0000000001111111110 00001
Q ss_pred hhcCCCCCCCCcccCCC--ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhH
Q 000523 828 AEASRPKKKGMVLPFEP--HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVL 905 (1445)
Q Consensus 828 ~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L 905 (1445)
.+.+...+.....+.+| ..++|+|++.+|.. +-..+|||||+.|+|||++||+|++|||||||+++|
T Consensus 1118 ~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aL 1186 (1381)
T KOG0054|consen 1118 SEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILAL 1186 (1381)
T ss_pred CCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHH
Confidence 11111111111223344 57999999877753 223699999999999999999999999999999999
Q ss_pred hCCCCCCeEEEEEEEcCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC
Q 000523 906 AGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVE 982 (1445)
Q Consensus 906 ~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~ 982 (1445)
.+... +.+|+|.|||.++.+ ..+|++++.+||||.+|. -|+|. |.|+..+..++.+++++|.++
T Consensus 1187 FRl~e--~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFs-GTvR~----------NLDPf~e~sD~~IW~ALe~~~ 1253 (1381)
T KOG0054|consen 1187 FRLVE--PAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFS-GTVRF----------NLDPFDEYSDDEIWEALERCQ 1253 (1381)
T ss_pred HHhcC--ccCCeEEEcCeecccccHHHHHhcCeeeCCCCceec-Ccccc----------ccCcccccCHHHHHHHHHHhC
Confidence 99876 468999999999765 467888999999998764 35555 446667777888999999999
Q ss_pred Cccccccccc------CCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEec
Q 000523 983 LNPLRQSLVG------LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIH 1056 (1445)
Q Consensus 983 L~~~~~~~vg------~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~H 1056 (1445)
|.+...++.+ .++..++|.||||.+|+||||+++++||+|||+|+++|++|...|+++||+..+ ++|||++.|
T Consensus 1254 Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAH 1332 (1381)
T KOG0054|consen 1254 LKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAH 1332 (1381)
T ss_pred hHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEee
Confidence 9876544332 235678999999999999999999999999999999999999999999999864 799999999
Q ss_pred CccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1057 QPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1057 qps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
+.+. +. .+|||+||++ |+++.+|.+
T Consensus 1333 Rl~T-Vm-d~DrVlVld~-G~v~EfdsP 1357 (1381)
T KOG0054|consen 1333 RLNT-VM-DSDRVLVLDA-GRVVEFDSP 1357 (1381)
T ss_pred ccch-hh-hcCeEEEeeC-CeEeecCCh
Confidence 9873 44 5799999996 799999987
No 15
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=9.2e-70 Score=731.18 Aligned_cols=224 Identities=28% Similarity=0.412 Sum_probs=192.6
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++|+++.++. +++.+|+|||+.|++||++||+||||||||||+++|+|... +.+|+|.++|++.
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~--ptsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTT--VTSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCC--CCccEEEECCEEC
Confidence 4788999877631 12569999999999999999999999999999999999876 4589999999886
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000523 926 KQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1003 (1445)
Q Consensus 926 ~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1445)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.++|.+..|..+ +.|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHH
Confidence 42 2345679999999999999999999998777653 233444566889999999998888774 5799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1004 rqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
||||+||+||+.+|+||||||||+|||+.+++.+++.|+++.++|+|||+|||+++ ++..+|||+++|.+ |++++.|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999986 68889999999985 89999998
Q ss_pred CCCchhhHHHHHH
Q 000523 1084 LGRHSCHLISYFE 1096 (1445)
Q Consensus 1084 ~~~~~~~~~~yF~ 1096 (1445)
. +++..-|.
T Consensus 2154 ~----q~Lk~~~g 2162 (2272)
T TIGR01257 2154 I----QHLKSKFG 2162 (2272)
T ss_pred H----HHHHHHhC
Confidence 6 45555553
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.2e-68 Score=729.15 Aligned_cols=211 Identities=22% Similarity=0.304 Sum_probs=178.4
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCcc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 924 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1445)
..++|+||+++|+. +...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEe
Confidence 46999999998852 12359999999999999999999999999999999999876 458999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000523 925 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 994 (1445)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1445)
+.+ ..+|+.++||||++.++.. |++|||.+.. +.+ ++.++++++..++.+. .|+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~------~~t----deei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN------EHN----DADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC------CCC----HHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 764 4577889999999998874 9999996531 122 3347788888877643 34555553
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec
Q 000523 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
..+||||||||++|||||+++|+||+||||||+||+.+...|+++|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1372 -G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 -GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA 1447 (1622)
T ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999885 4899999999986 3566899999985
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|+++.+|+.
T Consensus 1448 -G~IvE~Gt~ 1456 (1622)
T PLN03130 1448 -GRVVEFDTP 1456 (1622)
T ss_pred -CEEEEeCCH
Confidence 899999986
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.2e-67 Score=721.85 Aligned_cols=211 Identities=20% Similarity=0.278 Sum_probs=178.2
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCcc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 924 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1445)
..++|+|++++++. +.+.+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEE
Confidence 46999999999842 12359999999999999999999999999999999999876 458999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000523 925 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 994 (1445)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 994 (1445)
+.+ ..+++.++||||++.+++ -|++|||.+.. +.+ ++.++++++..++.+.. |+.+|..
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~-gTIr~NL~~~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1368 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFS-GTVRFNIDPFS------EHN----DADLWEALERAHIKDVIDRNPFGLDAEVSEG 1368 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeC-ccHHHHcCCCC------CCC----HHHHHHHHHHcCCHHHHHhCcCCCCceecCC
Confidence 754 457788999999999887 49999996531 222 33477888888876543 4555554
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec
Q 000523 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
..+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1369 -G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1369 -GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999875 4899999999985 4566999999985
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|+++..|+.
T Consensus 1445 -G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 -GQVLEYDSP 1453 (1495)
T ss_pred -CEEEEECCH
Confidence 899999986
No 18
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.2e-66 Score=707.10 Aligned_cols=217 Identities=20% Similarity=0.322 Sum_probs=179.4
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC------------
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------------ 912 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~------------ 912 (1445)
..++|+||+|+|+.. ++..+|+|+|++|+||+++||+||||||||||+++|.|..++.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 369999999998531 1236999999999999999999999999999999999976541
Q ss_pred ----------------------------------------eEEEEEEEcCccCCc---ccccceEEEeccCCCCCCCCCH
Q 000523 913 ----------------------------------------YITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTI 949 (1445)
Q Consensus 913 ----------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv 949 (1445)
+.+|+|.+||.++.+ ..+++.+|||+|++.+|+ .|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~-gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFN-MSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccc-ccH
Confidence 148999999998754 457889999999998874 899
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEE
Q 000523 950 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-------LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1022 (1445)
Q Consensus 950 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illL 1022 (1445)
+|||.|+. ++.+.+ .++++++..++.+ -.|+.+|..| ..||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~-----~~at~e----eI~~A~k~A~l~~fI~~LP~GydT~VGe~G-~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK-----EDATRE----DVKRACKFAAIDEFIESLPNKYDTNVGPYG-KSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC-----CCCCHH----HHHHHHHHcCCHHHHHhCccccCCccCCCC-CcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999862 233332 3667777766654 3477788554 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhhceEeEEecC---cE-EEEEcCC
Q 000523 1023 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG---GQ-EIYVGPL 1084 (1445)
Q Consensus 1023 DEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~Hqps~~i~~~fD~v~~l~~g---G~-~~y~G~~ 1084 (1445)
|||||+||+.+++.|++.|+++. .+++|+|+++|+++ ..+.+|++++|++| |+ ++..|+-
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999986 35899999999985 46789999999973 66 4578874
No 19
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.4e-65 Score=705.12 Aligned_cols=211 Identities=18% Similarity=0.209 Sum_probs=178.5
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCcc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 924 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1445)
..++|+|++++++.. ...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 469999999998531 1359999999999999999999999999999999999876 458999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000523 925 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 994 (1445)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1445)
+.+ ..+++.++||||++.+++. |++|||.... +.+ ++.++++++.+++.+. .|+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 764 4577889999999999875 9999995211 222 2347788888887654 35556553
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec
Q 000523 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
..+||||||||+||||||+++|+||+||||||+||+++...|+++|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 35799999999999999999999999999999999999999999999875 4899999999985 4667899999985
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|+++..|+.
T Consensus 1495 -G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 -GEVAEFGAP 1503 (1522)
T ss_pred -CEEEEECCH
Confidence 899999986
No 20
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=4.2e-65 Score=606.74 Aligned_cols=491 Identities=26% Similarity=0.323 Sum_probs=374.0
Q ss_pred eEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhhcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHH
Q 000523 118 EVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLA 197 (1445)
Q Consensus 118 ~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~ 197 (1445)
=++.+||++++... + ....+++||||++.+||+++|+|.|||||||+.++
T Consensus 5 lL~V~nL~v~~~~~-~-----------------------------~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~ 54 (539)
T COG1123 5 LLEVENLTVEFATD-G-----------------------------GRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALA 54 (539)
T ss_pred eEEEeceEEEEecC-C-----------------------------cceeeeecceEEecCCcEEEEEcCCCCCHHHHHHH
Confidence 47889999998642 1 22469999999999999999999999999999999
Q ss_pred HhCCCCCC-CCceeEEEEcCccCCCcCc-------cceEEEEcCCC--CCCCCCCHHHHHHHhHHhcCCCchhhhhHHHH
Q 000523 198 LAGKLDPT-LKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELA 267 (1445)
Q Consensus 198 L~G~~~~~-~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~ 267 (1445)
|.|.+++. ...+|+|.++|.++..... .+.++||+|++ .+-|-+||.+-+.=..+.++...
T Consensus 55 i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~--------- 125 (539)
T COG1123 55 LMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGS--------- 125 (539)
T ss_pred HhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhcccc---------
Confidence 99999987 4568999999997755443 26799999986 46677898888865544432111
Q ss_pred HHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCcccee
Q 000523 268 RREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFM 347 (1445)
Q Consensus 268 ~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllL 347 (1445)
.++...++.++|+..||++.... +++++.|||||||||.||+||+.+|++|++
T Consensus 126 ------------------------~~ea~~~a~elL~~Vgl~~~~~~---~~yPheLSGG~rQRv~iAmALa~~P~LLIa 178 (539)
T COG1123 126 ------------------------RAEARKRAVELLEQVGLPDPERR---DRYPHQLSGGMRQRVMIAMALALKPKLLIA 178 (539)
T ss_pred ------------------------HHHHHHHHHHHHHHcCCCChhhh---ccCCcccCchHHHHHHHHHHHhCCCCEEEE
Confidence 12334567889999999987654 568889999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCC
Q 000523 348 DEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRK 427 (1445)
Q Consensus 348 DEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~cp~~~ 427 (1445)
||||++||..++.+|.+.|+++.+ ..++.++.++|+..-+.++||||+||.+|++|+.|+.+++.+.+ .
T Consensus 179 DEPTTaLDvt~q~qIL~llk~l~~-e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~~~i~~~p--------~-- 247 (539)
T COG1123 179 DEPTTALDVTTQAQILDLLKDLQR-ELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPTEEILSNP--------Q-- 247 (539)
T ss_pred CCCccccCHHHHHHHHHHHHHHHH-HcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCHHHHHhcc--------C--
Confidence 999999999999999999999876 56777888999999999999999999999999999999886411 0
Q ss_pred ChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCcccccccccccccccccCcHHHHHHH
Q 000523 428 GVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKA 507 (1445)
Q Consensus 428 ~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 507 (1445)
.||.. .+.++ .|.
T Consensus 248 -----------------------hpYT~----~Ll~a---------------~p~------------------------- 260 (539)
T COG1123 248 -----------------------HPYTR----GLLAA---------------VPR------------------------- 260 (539)
T ss_pred -----------------------CcccH----HHHhh---------------CCC-------------------------
Confidence 01100 00000 000
Q ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccchhhHHHHHHHHHHHHhHHHHHHHHhhhchhHH
Q 000523 508 NISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFY 587 (1445)
Q Consensus 508 ~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~ 587 (1445)
..... ..
T Consensus 261 --------------------------------------~~~~~--~~--------------------------------- 267 (539)
T COG1123 261 --------------------------------------LGDEK--II--------------------------------- 267 (539)
T ss_pred --------------------------------------ccccc--cc---------------------------------
Confidence 00000 00
Q ss_pred HhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHH
Q 000523 588 KQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVA 667 (1445)
Q Consensus 588 kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rff~~~~~~~~~~~~~~~l~~~ia~~~~~~~vA 667 (1445)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHHhcCCcccccccCCccccHHHHHhhcCccccch
Q 000523 668 NTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEY 747 (1445)
Q Consensus 668 ~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~ 747 (1445)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeccccccccccccCCccccccCCCCCCccccccccchhhhhhh
Q 000523 748 WYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSTDDIRGQQSSSQSLSLAE 827 (1445)
Q Consensus 748 ~~w~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 827 (1445)
.. .. .
T Consensus 268 --------------------------------------------------------------~~-~~--------~---- 272 (539)
T COG1123 268 --------------------------------------------------------------RL-PR--------R---- 272 (539)
T ss_pred --------------------------------------------------------------cc-cc--------c----
Confidence 00 00 0
Q ss_pred hhcCCCCCCCCcccCCCceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhC
Q 000523 828 AEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAG 907 (1445)
Q Consensus 828 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g 907 (1445)
.. .+ ...-++++|++..+..++.+. ....+...+++||||.+++||++||+|.||||||||.++|+|
T Consensus 273 --~~--------~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~g 339 (539)
T COG1123 273 --GP--------LR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAG 339 (539)
T ss_pred --cc--------cc-cCceeEeeeeeeeeccccccc--cccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhC
Confidence 00 00 001244455544443322110 000133579999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEEEcCccC--Cc---ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Q 000523 908 RKTGGYITGNITISGYPK--KQ---ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMEL 980 (1445)
Q Consensus 908 ~~~~~~~~G~i~i~g~~~--~~---~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~ 980 (1445)
..++ ..|.|.++|.+. .. ...++.+-+++||+ .+.|.+||++.+.-....... ....++++++.++++.
T Consensus 340 L~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~--~~~~~~~~rv~~ll~~ 415 (539)
T COG1123 340 LLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGG--GSGAERRARVAELLEL 415 (539)
T ss_pred CCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcc--cchHHHHHHHHHHHHH
Confidence 8874 589999999762 11 22345566667764 578999999999876544332 2245667789999999
Q ss_pred cCCcc-cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCc
Q 000523 981 VELNP-LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQP 1058 (1445)
Q Consensus 981 l~L~~-~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqp 1058 (1445)
++|.. ..+.. +..||||||||++|||||+.+|++|++|||||.||+..+..|.++|+++.++ |.|.|+++||.
T Consensus 416 VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl 490 (539)
T COG1123 416 VGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDL 490 (539)
T ss_pred cCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCH
Confidence 99985 34443 5689999999999999999999999999999999999999999999999765 99999999998
Q ss_pred cHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1059 SIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1059 s~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
+. +.+.|||+.+|++ |++|..||.
T Consensus 491 ~v-V~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 491 AV-VRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred HH-HHhhCceEEEEEC-CeEEEeCCH
Confidence 74 7889999999985 899999985
No 21
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-64 Score=627.80 Aligned_cols=457 Identities=21% Similarity=0.293 Sum_probs=347.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC--CCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 239 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++| + +|+|.++|+++..... ++.++||+|++.+++
T Consensus 19 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 95 (506)
T PRK13549 19 KALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTY---EGEIIFEGEELQASNIRDTERAGIAIIHQELALVK 95 (506)
T ss_pred EeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHHCCeEEEEeccccCC
Confidence 499999999999999999999999999999999999986 6 9999999998865432 356999999988899
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
.+||+||+.++......+.. . ..+....++++++.+||++..+..+
T Consensus 96 ~~tv~e~l~~~~~~~~~~~~-~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 141 (506)
T PRK13549 96 ELSVLENIFLGNEITPGGIM-D------------------------------YDAMYLRAQKLLAQLKLDINPATPV--- 141 (506)
T ss_pred CCcHHHHhhhcccccccCCc-C------------------------------HHHHHHHHHHHHHHcCCCCCcccch---
Confidence 99999999986432100000 0 0011224677899999987666555
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
+.|||||||||+||++|+.+|++|||||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+.||+|++|+
T Consensus 142 --~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvi~~tH~~~~~~~~~d~v~~l~ 217 (506)
T PRK13549 142 --GNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-H-GIACIYISHKLNEVKAISDTICVIR 217 (506)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHHhcCEEEEEE
Confidence 46999999999999999999999999999999999999999999998854 3 4556668889999999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHhhc
Q 000523 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 479 (1445)
+|++++.|+.+++.. .+..+.
T Consensus 218 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 238 (506)
T PRK13549 218 DGRHIGTRPAAGMTE--------------------------------------------DDIITM--------------- 238 (506)
T ss_pred CCEEeeecccccCCH--------------------------------------------HHHHHH---------------
Confidence 999998886432200 000000
Q ss_pred CCcccccccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccchhhH
Q 000523 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1445)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~~g 559 (1445)
+. + .. .
T Consensus 239 -------------------------------------------------------------~~--~--~~-~-------- 244 (506)
T PRK13549 239 -------------------------------------------------------------MV--G--RE-L-------- 244 (506)
T ss_pred -------------------------------------------------------------hh--C--cC-c--------
Confidence 00 0 00 0
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCchHHHHHH
Q 000523 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1445)
Q Consensus 560 ~lff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rff~~ 639 (1445)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHHhcCC
Q 000523 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1445)
Q Consensus 640 ~~~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~ 719 (1445)
+
T Consensus 245 ----------------------------------------------------~--------------------------- 245 (506)
T PRK13549 245 ----------------------------------------------------T--------------------------- 245 (506)
T ss_pred ----------------------------------------------------c---------------------------
Confidence 0
Q ss_pred cccccccCCccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeccccccccccccCC
Q 000523 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1445)
Q Consensus 720 ~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1445)
. . .+
T Consensus 246 ---~-------------------------------------------------~-~~----------------------- 249 (506)
T PRK13549 246 ---A-------------------------------------------------L-YP----------------------- 249 (506)
T ss_pred ---c-------------------------------------------------c-cc-----------------------
Confidence 0 0 00
Q ss_pred ccccccCCCCCCccccccccchhhhhhhhhcCCCCCCCCcccCCCceeEEecceeeeecchhhhhccccCCceEEeecce
Q 000523 800 NVQLSTLGGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVS 879 (1445)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs 879 (1445)
. . . ... ...-++++|+++.++.. +++.+|+|||
T Consensus 250 ----------~------------~---~----~~~--------~~~~l~~~~l~~~~~~~----------~~~~vl~~vs 282 (506)
T PRK13549 250 ----------R------------E---P----HTI--------GEVILEVRNLTAWDPVN----------PHIKRVDDVS 282 (506)
T ss_pred ----------c------------c---c----cCC--------CCceEEEecCccccccc----------ccccccccee
Confidence 0 0 0 000 00025566666544210 1235899999
Q ss_pred EEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc----ccccceEEEeccCC---CCCCCCCHHHH
Q 000523 880 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IHSPFVTIYES 952 (1445)
Q Consensus 880 ~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d---~~~~~lTv~E~ 952 (1445)
++|++||++||+||||||||||+++|+|..++ +.+|+|.++|.+... ...++.+||++|++ .+++.+||.|+
T Consensus 283 l~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~ 361 (506)
T PRK13549 283 FSLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKN 361 (506)
T ss_pred eEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHH
Confidence 99999999999999999999999999998641 248999999976532 12245689999985 46788999999
Q ss_pred HHHHHHhcCC--CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000523 953 LLFSAWLRLS--PEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1445)
Q Consensus 953 l~f~~~lr~~--~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgL 1029 (1445)
+.+....... ...+....++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|++|+|||||+||
T Consensus 362 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~L 436 (506)
T PRK13549 362 ITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGI 436 (506)
T ss_pred hhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCc
Confidence 9875321111 0012233445688999999996 4666653 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCCC
Q 000523 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 1086 (1445)
Q Consensus 1030 D~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~~ 1086 (1445)
|+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |+++..|+..+
T Consensus 437 D~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 437 DVGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred CHhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 999999999999999888999999999986 57889999999986 79999988754
No 22
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-64 Score=627.20 Aligned_cols=457 Identities=21% Similarity=0.296 Sum_probs=346.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1445)
++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.+
T Consensus 19 ~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 95 (510)
T PRK09700 19 HALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDEL 95 (510)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 24699999998889999
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+||+.++..... ..+.. +..+ ..+...+++++++.+||++..|+.++
T Consensus 96 tv~e~l~~~~~~~~--~~~~~--------------~~~~-----------~~~~~~~~~~~l~~~gl~~~~~~~~~---- 144 (510)
T PRK09700 96 TVLENLYIGRHLTK--KVCGV--------------NIID-----------WREMRVRAAMMLLRVGLKVDLDEKVA---- 144 (510)
T ss_pred cHHHHhhhcccccc--ccccc--------------cccC-----------HHHHHHHHHHHHHHcCCCCCcccchh----
Confidence 99999987532100 00000 0000 00112346778999999877776554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.++||++++|++|
T Consensus 145 -~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsHd~~~~~~~~d~v~~l~~G 221 (510)
T PRK09700 145 -NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-E-GTAIVYISHKLAEIRRICDRYTVMKDG 221 (510)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 5999999999999999999999999999999999999999999999864 3 455666889999999999999999999
Q ss_pred eEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHhhcCC
Q 000523 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1445)
Q Consensus 402 ~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 481 (1445)
++++.|+++++.. .+..+.
T Consensus 222 ~i~~~g~~~~~~~--------------------------------------------~~~~~~----------------- 240 (510)
T PRK09700 222 SSVCSGMVSDVSN--------------------------------------------DDIVRL----------------- 240 (510)
T ss_pred EEeeecchhhCCH--------------------------------------------HHHHHH-----------------
Confidence 9999887654210 000000
Q ss_pred cccccccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccchhhHHH
Q 000523 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1445)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~~g~l 561 (1445)
.. + .. ..
T Consensus 241 -----------------------------------------------------------~~--~--~~-~~--------- 247 (510)
T PRK09700 241 -----------------------------------------------------------MV--G--RE-LQ--------- 247 (510)
T ss_pred -----------------------------------------------------------hc--C--CC-cc---------
Confidence 00 0 00 00
Q ss_pred HHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Q 000523 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1445)
Q Consensus 562 ff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rff~~~~ 641 (1445)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHHhcCCcc
Q 000523 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1445)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~ 721 (1445)
...
T Consensus 248 -----------------------------------------------------------------------------~~~ 250 (510)
T PRK09700 248 -----------------------------------------------------------------------------NRF 250 (510)
T ss_pred -----------------------------------------------------------------------------ccc
Confidence 000
Q ss_pred cccccCCccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeccccccccccccCCcc
Q 000523 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1445)
Q Consensus 722 ~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1445)
. . . .+
T Consensus 251 ~----~--------------~--------------------------------~~------------------------- 255 (510)
T PRK09700 251 N----A--------------M--------------------------------KE------------------------- 255 (510)
T ss_pred c----c--------------c--------------------------------cc-------------------------
Confidence 0 0 0 00
Q ss_pred ccccCCCCCCccccccccchhhhhhhhhcCCCCCCCCcccCCCceeEEecceeeeecchhhhhccccCCceEEeecceEE
Q 000523 802 QLSTLGGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGA 881 (1445)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~ 881 (1445)
. . . ... .+.-+.++|++... ..+|+|+|++
T Consensus 256 --------~------------~------~--~~~-------~~~~l~~~~l~~~~---------------~~~l~~isl~ 285 (510)
T PRK09700 256 --------N------------V------S--NLA-------HETVFEVRNVTSRD---------------RKKVRDISFS 285 (510)
T ss_pred --------c------------c------c--cCC-------CCcEEEEeCccccC---------------CCcccceeEE
Confidence 0 0 0 000 00135667766431 1279999999
Q ss_pred eeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc----ccccceEEEeccC---CCCCCCCCHHHHHH
Q 000523 882 FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQN---DIHSPFVTIYESLL 954 (1445)
Q Consensus 882 i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~---d~~~~~lTv~E~l~ 954 (1445)
|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|+ ..+++.+||.|++.
T Consensus 286 i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~ 363 (510)
T PRK09700 286 VCRGEILGFAGLVGSGRTELMNCLFGVDK--RAGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMA 363 (510)
T ss_pred EcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhc
Confidence 99999999999999999999999999875 458999999976532 1234568999998 45788899999998
Q ss_pred HHHHhc---CCC--C-CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000523 955 FSAWLR---LSP--E-VDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1027 (1445)
Q Consensus 955 f~~~lr---~~~--~-~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTs 1027 (1445)
+....+ ... . ......++.++++++.+++. +..+..+ ..|||||||||+||++|+.+|+||+|||||+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~ 438 (510)
T PRK09700 364 ISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPTR 438 (510)
T ss_pred cccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 753221 000 0 11222334578899999996 6666653 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1028 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1028 gLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
|||+.++..+++.|++++++|.|||+++||+. .+.+.+|++++|++ |+++..++.
T Consensus 439 ~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 439 GIDVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred CcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 99999999999999999878999999999986 57889999999986 788888865
No 23
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=9.6e-64 Score=624.22 Aligned_cols=449 Identities=21% Similarity=0.326 Sum_probs=344.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (501)
T PRK10762 18 KALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQL 94 (501)
T ss_pred EEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCCC
Confidence 4999999999999999999999999999999999999998 9999999988754321 35699999998889999
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+||+.|+.......... + ..+...+++++++.+||++..|..++
T Consensus 95 tv~e~l~~~~~~~~~~~~~-------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~---- 140 (501)
T PRK10762 95 TIAENIFLGREFVNRFGRI-------------------D-----------WKKMYAEADKLLARLNLRFSSDKLVG---- 140 (501)
T ss_pred cHHHHhhhccccccccCcc-------------------C-----------HHHHHHHHHHHHHHcCCCCCccCchh----
Confidence 9999999864321000000 0 00112345678999999887765554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
.|||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|+++.. . +++|+.++|+..++.++||+|++|++|
T Consensus 141 -~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvii~sHd~~~~~~~~d~i~~l~~G 217 (501)
T PRK10762 141 -ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-Q-GRGIVYISHRLKEIFEICDDVTVFRDG 217 (501)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 5999999999999999999999999999999999999999999998754 3 455666889999999999999999999
Q ss_pred eEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHhhcCC
Q 000523 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1445)
Q Consensus 402 ~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 481 (1445)
+++..|+.+++.. ++..+.
T Consensus 218 ~i~~~~~~~~~~~--------------------------------------------~~~~~~----------------- 236 (501)
T PRK10762 218 QFIAEREVADLTE--------------------------------------------DSLIEM----------------- 236 (501)
T ss_pred EEEEecCcCcCCH--------------------------------------------HHHHHH-----------------
Confidence 9998775432100 000000
Q ss_pred cccccccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccchhhHHH
Q 000523 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1445)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~~g~l 561 (1445)
++ . .
T Consensus 237 -----------------------------------------------------------~~--~---~------------ 240 (501)
T PRK10762 237 -----------------------------------------------------------MV--G---R------------ 240 (501)
T ss_pred -----------------------------------------------------------hc--C---C------------
Confidence 00 0 0
Q ss_pred HHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Q 000523 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1445)
Q Consensus 562 ff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rff~~~~ 641 (1445)
T Consensus 241 -------------------------------------------------------------------------------- 240 (501)
T PRK10762 241 -------------------------------------------------------------------------------- 240 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHHhcCCcc
Q 000523 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1445)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~ 721 (1445)
+.
T Consensus 241 ------------------------------------------------------------------------------~~ 242 (501)
T PRK10762 241 ------------------------------------------------------------------------------KL 242 (501)
T ss_pred ------------------------------------------------------------------------------Cc
Confidence 00
Q ss_pred cccccCCccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeccccccccccccCCcc
Q 000523 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1445)
Q Consensus 722 ~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1445)
... .+
T Consensus 243 ~~~--------------------------------------------------~~------------------------- 247 (501)
T PRK10762 243 EDQ--------------------------------------------------YP------------------------- 247 (501)
T ss_pred ccc--------------------------------------------------cc-------------------------
Confidence 000 00
Q ss_pred ccccCCCCCCccccccccchhhhhhhhhcCCCCCCCCcccCCCceeEEecceeeeecchhhhhccccCCceEEeecceEE
Q 000523 802 QLSTLGGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGA 881 (1445)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~ 881 (1445)
. . . .. + .+..++++|++. .+|+|+|++
T Consensus 248 --------~------------~---~-----~~------~-~~~~l~~~~l~~------------------~~l~~vsl~ 274 (501)
T PRK10762 248 --------R------------L---D-----KA------P-GEVRLKVDNLSG------------------PGVNDVSFT 274 (501)
T ss_pred --------c------------c---c-----cC------C-CCcEEEEeCccc------------------CCcccceEE
Confidence 0 0 0 00 0 001245555541 269999999
Q ss_pred eeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCCCCHHHHHH
Q 000523 882 FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPFVTIYESLL 954 (1445)
Q Consensus 882 i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d---~~~~~lTv~E~l~ 954 (1445)
|++||+++|+|||||||||||++|+|... +.+|+|.++|.+.... ..++.+||++|++ .+++.+||.|++.
T Consensus 275 i~~Ge~~~liG~NGsGKSTLl~~l~G~~~--p~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~ 352 (501)
T PRK10762 275 LRKGEILGVSGLMGAGRTELMKVLYGALP--RTSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMS 352 (501)
T ss_pred EcCCcEEEEecCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhh
Confidence 99999999999999999999999999875 4589999999775421 2345699999995 4678899999998
Q ss_pred HHHHhcCC---CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000523 955 FSAWLRLS---PEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1030 (1445)
Q Consensus 955 f~~~lr~~---~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD 1030 (1445)
+....... .....++.++.++++++.+++. +..+.. +..|||||||||+||++|+.+|++|+|||||+|||
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD 427 (501)
T PRK10762 353 LTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQA-----IGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVD 427 (501)
T ss_pred hhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCc-----hhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCC
Confidence 75321110 0012233345688999999995 566665 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCCC
Q 000523 1031 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 1086 (1445)
Q Consensus 1031 ~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~~ 1086 (1445)
+.++..+.+.|++++++|.|||+++|++. .+.+.+|++++|++ |++++.|+..+
T Consensus 428 ~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 428 VGAKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred HhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 99999999999999878999999999986 57889999999985 79999988753
No 24
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-63 Score=630.58 Aligned_cols=487 Identities=21% Similarity=0.244 Sum_probs=352.3
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCC----------CcC------c-cce
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMD----------EFV------P-QRT 227 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----------~~~------~-~~~ 227 (1445)
.++|+|||+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++. ... . ++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 45999999999999999999999999999999999999998 999999986431 111 1 246
Q ss_pred EEEEcCCC--CCCCCCCHHHHHHHhHHhc-CCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHH
Q 000523 228 AAYISQHD--NHIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLK 304 (1445)
Q Consensus 228 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1445)
++||+|++ .+++.+||+||+.++.+.. +.. ..+...+++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS----------------------------------REEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHH
Confidence 99999987 5788899999999876432 110 0011234677899
Q ss_pred HcCCcc---cccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEE
Q 000523 305 VLGLDV---CADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISL 381 (1445)
Q Consensus 305 ~lgL~~---~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i 381 (1445)
.+||++ ..+ +.+..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++.+ ..+++||.+
T Consensus 152 ~~gL~~~~~~~~-----~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~-~~g~tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILS-----RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQK-EMSMGVIFI 225 (623)
T ss_pred HCCCCChhhHHh-----CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHH-hcCCEEEEE
Confidence 999964 234 34557999999999999999999999999999999999999999999999865 334556778
Q ss_pred ecCchhHHhhcCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHH
Q 000523 382 LQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEF 461 (1445)
Q Consensus 382 ~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~ 461 (1445)
+|+..++.++||+|++|++|++++.|+++++.. -|.+. +. ..+
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~~----~~-------------------------~~l 268 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQHP----YT-------------------------RAL 268 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCCh----hh-------------------------hhh
Confidence 999999999999999999999999998776521 00000 00 000
Q ss_pred HHHHHhchhhhhhHHhhcCCcccccccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHH
Q 000523 462 AEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLF 541 (1445)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f 541 (1445)
.+.. +. ..
T Consensus 269 ~~~~---------------~~------~~--------------------------------------------------- 276 (623)
T PRK10261 269 LAAV---------------PQ------LG--------------------------------------------------- 276 (623)
T ss_pred hhcc---------------Cc------cc---------------------------------------------------
Confidence 0000 00 00
Q ss_pred hcccCCCccccccchhhHHHHHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHH
Q 000523 542 LRTKMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVF 621 (1445)
Q Consensus 542 ~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~ 621 (1445)
.+..... |
T Consensus 277 ---~~~~~~~----------------------------------------------------------~----------- 284 (623)
T PRK10261 277 ---AMKGLDY----------------------------------------------------------P----------- 284 (623)
T ss_pred ---ccccccC----------------------------------------------------------C-----------
Confidence 0000000 0
Q ss_pred HHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHH
Q 000523 622 LSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWC 701 (1445)
Q Consensus 622 i~Y~~~g~~~~~~rff~~~~~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~i 701 (1445)
T Consensus 285 -------------------------------------------------------------------------------- 284 (623)
T PRK10261 285 -------------------------------------------------------------------------------- 284 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cHHHHHHHHHHHHHhcCCcccccccCCccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 000523 702 SPLTYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPR 781 (1445)
Q Consensus 702 sP~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~ 781 (1445)
..... . .
T Consensus 285 -----------------~~~~~--------~----------------------------------------------~-- 291 (623)
T PRK10261 285 -----------------RRFPL--------I----------------------------------------------S-- 291 (623)
T ss_pred -----------------ccccc--------c----------------------------------------------c--
Confidence 00000 0 0
Q ss_pred cceeccccccccccccCCccccccCCCCCCccccccccchhhhhhhhhcCCCCCCCCcccCCCceeEEecceeeeecchh
Q 000523 782 AVITEEIESNEQDDRIGGNVQLSTLGGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEE 861 (1445)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 861 (1445)
. . .. . . .. +. . . .. ... + ...-++++|+++.+.....
T Consensus 292 ---~-~---~~--~---~----------~~--~~-------~---~--~~-~~~-----~-~~~~L~~~~l~~~y~~~~~ 328 (623)
T PRK10261 292 ---L-E---HP--A---K----------QE--PP-------I---E--QD-TVV-----D-GEPILQVRNLVTRFPLRSG 328 (623)
T ss_pred ---c-c---cc--c---c----------cC--cc-------c---c--cc-ccc-----C-CCceEEEeeeEEEEcCCCc
Confidence 0 0 00 0 0 00 00 0 0 00 000 0 0113778888877642100
Q ss_pred hhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcc------cccceEE
Q 000523 862 MKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE------TFARISG 935 (1445)
Q Consensus 862 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~g 935 (1445)
. .. .....+.+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++... .+++.++
T Consensus 329 ~-~~-~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~i~ 404 (623)
T PRK10261 329 L-LN-RVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQALRRDIQ 404 (623)
T ss_pred c-cc-ccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHHhcCCeE
Confidence 0 00 00012469999999999999999999999999999999999876 4589999999865321 2356799
Q ss_pred EeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHH
Q 000523 936 YCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVE 1012 (1445)
Q Consensus 936 yv~Q~d--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~ 1012 (1445)
|++|++ .+++.+||.|++.+....+. ....++.++.+.++++.++|. +..+.. +..|||||||||+|||+
T Consensus 405 ~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSgGqrQRv~iAra 477 (623)
T PRK10261 405 FIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSGGQRQRICIARA 477 (623)
T ss_pred EEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHH
Confidence 999996 57889999999987654321 112334456788999999996 455655 45799999999999999
Q ss_pred HhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1013 LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1013 L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
|+.+|++|||||||+|||+.++..+++.|++++++ |.|||++|||++ .+.+.+|++++|++ |++++.|+.
T Consensus 478 L~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~ 548 (623)
T PRK10261 478 LALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPR 548 (623)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999765 899999999987 57788999999985 799999986
No 25
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=3.3e-62 Score=669.54 Aligned_cols=210 Identities=19% Similarity=0.233 Sum_probs=178.0
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCcc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 924 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1445)
..++|+||+++++. +.+.+|+|||++|+|||++||+|+||||||||+++|+|... .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 46999999999863 12469999999999999999999999999999999999864 47999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000523 925 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 994 (1445)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1445)
+.+ ..+++.++||||++.+++ -||+|||.... .. .++.++++++.++|.+. .|+.+|..
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~-GTIR~NLdp~~------~~----tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~ 1350 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFS-GTFRKNLDPYE------QW----SDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDG 1350 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCc-cCHHHHhCccc------CC----CHHHHHHHHHHCCCHHHHHhCccccccccccC
Confidence 764 457788999999999987 49999994321 11 23457889999988654 35555543
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec
Q 000523 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
..+||||||||+||||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1351 -G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1351 -GYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred -CCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999999875 4799999999985 4567999999986
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|+++.+|++
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 799999986
No 26
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1e-62 Score=619.06 Aligned_cols=464 Identities=22% Similarity=0.277 Sum_probs=345.4
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCcCc-------cceEEEEcCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEFVP-------QRTAAYISQHD 235 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1445)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|+++..... ++.++|++|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 359999999999999999999999999999999999998610 128999999998755321 24699999986
Q ss_pred C--CCCCCCHHHHHHHhHHhc-CCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccc-
Q 000523 236 N--HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC- 311 (1445)
Q Consensus 236 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~- 311 (1445)
. +.+.+||+|++.+..... +.. ..+...+++++++.+||++.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------------------------------REAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHCCCCChH
Confidence 4 567789999987643211 100 00112346778999999752
Q ss_pred --ccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHH
Q 000523 312 --ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETY 389 (1445)
Q Consensus 312 --~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~ 389 (1445)
.|. .+..|||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|+++.+. .+.+||.++|+..++.
T Consensus 148 ~~~~~-----~~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTD-----YPHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQE-LNMGLLFITHNLSIVR 221 (529)
T ss_pred HHHhh-----CCcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHh-cCCeEEEEcCcHHHHH
Confidence 344 34569999999999999999999999999999999999999999999997653 3455666889999999
Q ss_pred hhcCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhch
Q 000523 390 DLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFH 469 (1445)
Q Consensus 390 ~~~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (1445)
++||+|++|++|++++.|+.+++.+. |.
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~-------------------------------------------- 249 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PT-------------------------------------------- 249 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CC--------------------------------------------
Confidence 99999999999999999977654210 00
Q ss_pred hhhhhHHhhcCCcccccccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCc
Q 000523 470 VGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKD 549 (1445)
Q Consensus 470 ~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~ 549 (1445)
+. . . +.+ +...
T Consensus 250 ------------------~~-----------~---~-----~~~----------------------------~~~~---- 260 (529)
T PRK15134 250 ------------------HP-----------Y---T-----QKL----------------------------LNSE---- 260 (529)
T ss_pred ------------------CH-----------H---H-----HHH----------------------------HHhC----
Confidence 00 0 0 000 0000
Q ss_pred cccccchhhHHHHHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCC
Q 000523 550 TVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGY 629 (1445)
Q Consensus 550 ~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~ 629 (1445)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHH
Q 000523 630 DSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQN 709 (1445)
Q Consensus 630 ~~~~~rff~~~~~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~ 709 (1445)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhcCCcccccccCCccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceecccc
Q 000523 710 AIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIE 789 (1445)
Q Consensus 710 al~~nef~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~~~~~~~~~ 789 (1445)
. . . .+
T Consensus 261 -------------~---~-----~-----------------------------------------~~------------- 265 (529)
T PRK15134 261 -------------P---S-----G-----------------------------------------DP------------- 265 (529)
T ss_pred -------------c---c-----c-----------------------------------------cc-------------
Confidence 0 0 0 00
Q ss_pred ccccccccCCccccccCCCCCCccccccccchhhhhhhhhcCCCCCCCCcccCCCceeEEecceeeeecchhhhhccccC
Q 000523 790 SNEQDDRIGGNVQLSTLGGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLE 869 (1445)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 869 (1445)
. . . . .. .+.-++++|+++.+....+. .+ ...
T Consensus 266 ---------------------~-----------~---~---~-~~--------~~~~l~~~~l~~~~~~~~~~-~~-~~~ 296 (529)
T PRK15134 266 ---------------------V-----------P---L---P-EP--------ASPLLDVEQLQVAFPIRKGI-LK-RTV 296 (529)
T ss_pred ---------------------c-----------c---c---C-CC--------CCCcccccCcEEEeecCccc-cc-ccc
Confidence 0 0 0 0 00 00024566666655311000 00 000
Q ss_pred CceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcc------cccceEEEeccCC--
Q 000523 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE------TFARISGYCEQND-- 941 (1445)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~d-- 941 (1445)
+.+.+|+|||++|++||++||+||||||||||+++|+|..+ .+|+|.++|.++... .+++.+||++|+.
T Consensus 297 ~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 373 (529)
T PRK15134 297 DHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNS 373 (529)
T ss_pred ccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchh
Confidence 12469999999999999999999999999999999999863 479999999765321 1245689999996
Q ss_pred CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEE
Q 000523 942 IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1020 (1445)
Q Consensus 942 ~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~il 1020 (1445)
.+++.+||.|++.+....+.. .....+.++.++++++.++|. +..+.. +..|||||||||+||++|+.+|++|
T Consensus 374 ~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~ll 447 (529)
T PRK15134 374 SLNPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIARALILKPSLI 447 (529)
T ss_pred hcCCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHHHHhCCCCEE
Confidence 477889999999886543211 122334456688999999997 455654 4579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1021 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1021 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
+|||||+|||+.++..+++.|++++++ |+|||+++|++. .+.+.+|++++|++ |+++..|+.
T Consensus 448 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 448 ILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred EeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 999999999999999999999999865 899999999986 57788999999986 799999875
No 27
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1e-62 Score=618.16 Aligned_cols=444 Identities=23% Similarity=0.317 Sum_probs=340.5
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCC--CCCCCceeEEEEcC-----------------------ccCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL--DPTLKVSGTVTYNG-----------------------HDMD 220 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G-----------------------~~~~ 220 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.+ +|+ +|+|.++| .++.
T Consensus 14 ~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 90 (520)
T TIGR03269 14 EVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTLE 90 (520)
T ss_pred EeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEecccccccccccccccccccccccccccc
Confidence 4999999999999999999999999999999999997 677 99999972 2221
Q ss_pred -------Cc------CccceEEEEcCC-CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHH
Q 000523 221 -------EF------VPQRTAAYISQH-DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMK 286 (1445)
Q Consensus 221 -------~~------~~~~~~~yv~Q~-d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~ 286 (1445)
.. ..++.++|++|+ +.+++.+||+||+.|+....+.. .
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~-~--------------------------- 142 (520)
T TIGR03269 91 PEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYE-G--------------------------- 142 (520)
T ss_pred ccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCC-H---------------------------
Confidence 00 013568999997 57888899999999865432210 0
Q ss_pred HHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHH
Q 000523 287 AIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCL 366 (1445)
Q Consensus 287 ~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L 366 (1445)
.+...+++++++.+||++..+..+ +.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|
T Consensus 143 ------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l 211 (520)
T TIGR03269 143 ------KEAVGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNAL 211 (520)
T ss_pred ------HHHHHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHH
Confidence 011234677899999987666444 469999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhh
Q 000523 367 RQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYW 446 (1445)
Q Consensus 367 ~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~ 446 (1445)
+++++.. +.+|+.++|+...+.++||+|++|++|++++.|+++++.+.+..
T Consensus 212 ~~l~~~~-g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~---------------------------- 262 (520)
T TIGR03269 212 EEAVKAS-GISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFME---------------------------- 262 (520)
T ss_pred HHHHHhc-CcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHHh----------------------------
Confidence 9986533 45566688999999999999999999999988865533110000
Q ss_pred hccCCCCccCCHHHHHHHHHhchhhhhhHHhhcCCcccccccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHH
Q 000523 447 AHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFK 526 (1445)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~ 526 (1445)
T Consensus 263 -------------------------------------------------------------------------------- 262 (520)
T TIGR03269 263 -------------------------------------------------------------------------------- 262 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHhcccCCCccccccchhhHHHHHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHH
Q 000523 527 LIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWI 606 (1445)
Q Consensus 527 ~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i 606 (1445)
... .
T Consensus 263 ------------------~~~--~-------------------------------------------------------- 266 (520)
T TIGR03269 263 ------------------GVS--E-------------------------------------------------------- 266 (520)
T ss_pred ------------------hch--h--------------------------------------------------------
Confidence 000 0
Q ss_pred HhccHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhccc
Q 000523 607 LKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFIL 686 (1445)
Q Consensus 607 ~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rff~~~~~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i 686 (1445)
T Consensus 267 -------------------------------------------------------------------------------- 266 (520)
T TIGR03269 267 -------------------------------------------------------------------------------- 266 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccchhHHHHHHHHHcHHHHHHHHHHHHHhcCCcccccccCCccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHH
Q 000523 687 SREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFA 766 (1445)
Q Consensus 687 ~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~ 766 (1445)
+ ...
T Consensus 267 ----~------------------------------~~~------------------------------------------ 270 (520)
T TIGR03269 267 ----V------------------------------EKE------------------------------------------ 270 (520)
T ss_pred ----h------------------------------ccc------------------------------------------
Confidence 0 000
Q ss_pred HHHHHHhcCCCCCCCcceeccccccccccccCCccccccCCCCCCccccccccchhhhhhhhhcCCCCCCCCcccCCCce
Q 000523 767 YTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNVQLSTLGGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHS 846 (1445)
Q Consensus 767 ~~l~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 846 (1445)
.. . +. ...-
T Consensus 271 --------~~----------------------------------------------~---------~~--------~~~~ 279 (520)
T TIGR03269 271 --------CE----------------------------------------------V---------EV--------GEPI 279 (520)
T ss_pred --------cc----------------------------------------------c---------CC--------CCce
Confidence 00 0 00 0012
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEc-Ccc-
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITIS-GYP- 924 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~-g~~- 924 (1445)
++++|+++.+.... .+.+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++ |.+
T Consensus 280 l~~~~l~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~ 349 (520)
T TIGR03269 280 IKVRNVSKRYISVD--------RGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEW 349 (520)
T ss_pred EEEeccEEEeccCC--------CCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCcc
Confidence 56677776653100 012469999999999999999999999999999999999875 458999996 532
Q ss_pred --CCc------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-----cccccc
Q 000523 925 --KKQ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-----LRQSLV 991 (1445)
Q Consensus 925 --~~~------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-----~~~~~v 991 (1445)
... ...++.+||++|++.+++.+||.|++.+...+. ...+..++.++++++.++|.+ ..+..
T Consensus 350 ~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~- 424 (520)
T TIGR03269 350 VDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY- 424 (520)
T ss_pred ccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC-
Confidence 111 123456899999988889999999998754321 122333456788999999975 34444
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEe
Q 000523 992 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1070 (1445)
Q Consensus 992 g~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~ 1070 (1445)
+..|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|++++++ |.|||+++|++. .+.+.+|+++
T Consensus 425 ----~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~ 499 (520)
T TIGR03269 425 ----PDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAA 499 (520)
T ss_pred ----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEE
Confidence 4679999999999999999999999999999999999999999999999764 899999999986 5778899999
Q ss_pred EEecCcEEEEEcCC
Q 000523 1071 LMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1071 ~l~~gG~~~y~G~~ 1084 (1445)
+|++ |+++..|+.
T Consensus 500 ~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 500 LMRD-GKIVKIGDP 512 (520)
T ss_pred EEEC-CEEEEECCH
Confidence 9985 789988875
No 28
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=7.8e-63 Score=616.33 Aligned_cols=452 Identities=20% Similarity=0.278 Sum_probs=342.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.+++.+
T Consensus 25 ~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 101 (510)
T PRK15439 25 EVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPNL 101 (510)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 24699999998899999
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+||+.|+.... + +....++++++.+||++..+..++
T Consensus 102 tv~e~l~~~~~~~------~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~~---- 139 (510)
T PRK15439 102 SVKENILFGLPKR------Q--------------------------------ASMQKMKQLLAALGCQLDLDSSAG---- 139 (510)
T ss_pred cHHHHhhcccccc------h--------------------------------HHHHHHHHHHHHcCCCccccCChh----
Confidence 9999998753100 0 011235678899999877766554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
.|||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|+++++ . +.+|+.++|+..++.++||+|++|++|
T Consensus 140 -~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiivtHd~~~~~~~~d~i~~l~~G 216 (510)
T PRK15439 140 -SLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-Q-GVGIVFISHKLPEIRQLADRISVMRDG 216 (510)
T ss_pred -hCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 5999999999999999999999999999999999999999999998754 3 455666889999999999999999999
Q ss_pred eEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHhhcCC
Q 000523 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1445)
Q Consensus 402 ~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 481 (1445)
++++.|+.+++... +. .+.+..
T Consensus 217 ~i~~~g~~~~~~~~---------------~~-----------------------------~~~~~~-------------- 238 (510)
T PRK15439 217 TIALSGKTADLSTD---------------DI-----------------------------IQAITP-------------- 238 (510)
T ss_pred EEEEecChHHcCHH---------------HH-----------------------------HHHHhC--------------
Confidence 99999987653210 00 000000
Q ss_pred cccccccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccchhhHHH
Q 000523 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1445)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~~g~l 561 (1445)
+ ... ......
T Consensus 239 ------------------------------------~--------------------------~~~-~~~~~~------- 248 (510)
T PRK15439 239 ------------------------------------A--------------------------ARE-KSLSAS------- 248 (510)
T ss_pred ------------------------------------c--------------------------ccc-cccccc-------
Confidence 0 000 000000
Q ss_pred HHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Q 000523 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1445)
Q Consensus 562 ff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rff~~~~ 641 (1445)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHHhcCCcc
Q 000523 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1445)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~ 721 (1445)
. ..
T Consensus 249 --------------------------------------------------~---------------------------~~ 251 (510)
T PRK15439 249 --------------------------------------------------Q---------------------------KL 251 (510)
T ss_pred --------------------------------------------------c---------------------------cc
Confidence 0 00
Q ss_pred cccccCCccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeccccccccccccCCcc
Q 000523 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1445)
Q Consensus 722 ~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1445)
. ..+ +
T Consensus 252 ~-----------------~~~---------------------------------~------------------------- 256 (510)
T PRK15439 252 W-----------------LEL---------------------------------P------------------------- 256 (510)
T ss_pred c-----------------ccc---------------------------------c-------------------------
Confidence 0 000 0
Q ss_pred ccccCCCCCCccccccccchhhhhhhhhcCCCCCCCCcccCCCceeEEecceeeeecchhhhhccccCCceEEeecceEE
Q 000523 802 QLSTLGGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGA 881 (1445)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~ 881 (1445)
. . . . .. +..+.-+.++|++. .+|+|||++
T Consensus 257 -------------~-------~---~--~--~~------~~~~~~l~~~~l~~------------------~~l~~isl~ 285 (510)
T PRK15439 257 -------------G-------N---R--R--QQ------AAGAPVLTVEDLTG------------------EGFRNISLE 285 (510)
T ss_pred -------------c-------c---c--c--cc------CCCCceEEEeCCCC------------------CCccceeEE
Confidence 0 0 0 0 00 00011255666641 158999999
Q ss_pred eeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCCCCHHHHHH
Q 000523 882 FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPFVTIYESLL 954 (1445)
Q Consensus 882 i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d---~~~~~lTv~E~l~ 954 (1445)
|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++ .+++.+|+.|++.
T Consensus 286 i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~ 363 (510)
T PRK15439 286 VRAGEILGLAGVVGAGRTELAETLYGLRP--ARGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVC 363 (510)
T ss_pred EcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHH
Confidence 99999999999999999999999999865 4589999999865421 1234689999984 4778899999986
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHH
Q 000523 955 FSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1033 (1445)
Q Consensus 955 f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~ 1033 (1445)
.....+..........++.++++++.+++. +..+.. ++.|||||||||+||++|+.+|+||+|||||+|||+.+
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~ 438 (510)
T PRK15439 364 ALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQA-----ARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSA 438 (510)
T ss_pred hhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCc-----cccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhH
Confidence 421111110011222345678999999996 566665 35799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCC
Q 000523 1034 AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1085 (1445)
Q Consensus 1034 ~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~ 1085 (1445)
+..+++.|++++++|.|||+++|++. .+.+.+|++++|++ |++++.|..+
T Consensus 439 ~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 439 RNDIYQLIRSIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 99999999999888999999999997 58889999999985 7999888654
No 29
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3e-62 Score=669.74 Aligned_cols=211 Identities=23% Similarity=0.261 Sum_probs=178.9
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCcc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 924 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1445)
..+.|+||+++|+. +...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.|||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 46999999999852 12359999999999999999999999999999999999876 458999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000523 925 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 994 (1445)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1445)
+.. ..+++.+|||||++.++. -||+|||... .+.+ ++.++++++.+++.+. .|+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~-gTIreNIdp~------~~~s----deeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFD-GTVRQNVDPF------LEAS----SAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCcccc-ccHHHHhCcc------cCCC----HHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 754 457889999999999887 4999999531 1222 3457889999888764 35566654
Q ss_pred CCCcCCHHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 995 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~-p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
..+||||||||++|||||+++ |+||+||||||+||+.+...|+++|++.. +++|||+++|+++ ....||+|++|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE
Confidence 367999999999999999996 89999999999999999999999999874 4799999999985 567899999998
Q ss_pred cCcEEEEEcCC
Q 000523 1074 RGGQEIYVGPL 1084 (1445)
Q Consensus 1074 ~gG~~~y~G~~ 1084 (1445)
+ |+++..|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 5 899999985
No 30
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.7e-62 Score=613.60 Aligned_cols=457 Identities=19% Similarity=0.270 Sum_probs=343.5
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC--CCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 239 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++| + +|+|.++|+++..... ++.++||+|++.+++
T Consensus 15 ~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (500)
T TIGR02633 15 KALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTW---DGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVP 91 (500)
T ss_pred EeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHhCCEEEEeeccccCC
Confidence 499999999999999999999999999999999999986 5 8999999998765432 356999999988899
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccc-cccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA-DTMVGD 318 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-dt~vg~ 318 (1445)
.+||+||+.++......+.... ..+...+++++++.+||++.. +..
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (500)
T TIGR02633 92 ELSVAENIFLGNEITLPGGRMA------------------------------YNAMYLRAKNLLRELQLDADNVTRP--- 138 (500)
T ss_pred CCcHHHHHHhhccccccccccC------------------------------HHHHHHHHHHHHHHcCCCCCcccCc---
Confidence 9999999988643210000000 001123466789999997654 333
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
++.|||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|+++.. . +++|+.++|+..++.+.||+|++|
T Consensus 139 --~~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tviiitHd~~~~~~~~d~i~~l 214 (500)
T TIGR02633 139 --VGDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-H-GVACVYISHKLNEVKAVCDTICVI 214 (500)
T ss_pred --hhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCcHHHHHHhCCEEEEE
Confidence 446999999999999999999999999999999999999999999998754 3 455666889999999999999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHhh
Q 000523 399 SDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDEL 478 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 478 (1445)
++|++++.|+.+++.. .+.
T Consensus 215 ~~G~i~~~~~~~~~~~--------------------------------------------~~~----------------- 233 (500)
T TIGR02633 215 RDGQHVATKDMSTMSE--------------------------------------------DDI----------------- 233 (500)
T ss_pred eCCeEeeecCcccCCH--------------------------------------------HHH-----------------
Confidence 9999987664321000 000
Q ss_pred cCCcccccccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccchhh
Q 000523 479 RTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFA 558 (1445)
Q Consensus 479 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~~ 558 (1445)
. . .+. + .
T Consensus 234 --------------------------~-----~----------------------------~~~--~---~--------- 240 (500)
T TIGR02633 234 --------------------------I-----T----------------------------MMV--G---R--------- 240 (500)
T ss_pred --------------------------H-----H----------------------------HHh--C---c---------
Confidence 0 0 000 0 0
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCchHHHHH
Q 000523 559 GATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFK 638 (1445)
Q Consensus 559 g~lff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rff~ 638 (1445)
+
T Consensus 241 ---------------------------------------------------~---------------------------- 241 (500)
T TIGR02633 241 ---------------------------------------------------E---------------------------- 241 (500)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHHhcC
Q 000523 639 QYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLG 718 (1445)
Q Consensus 639 ~~~~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~ 718 (1445)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcccccccCCccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeccccccccccccC
Q 000523 719 HSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIG 798 (1445)
Q Consensus 719 ~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~~~~~~~~~~~~~~~~~~ 798 (1445)
. . .. .+
T Consensus 242 ----~--~--------------~~--------------------------------~~---------------------- 247 (500)
T TIGR02633 242 ----I--T--------------SL--------------------------------YP---------------------- 247 (500)
T ss_pred ----c--c--------------cc--------------------------------cc----------------------
Confidence 0 0 00 00
Q ss_pred CccccccCCCCCCccccccccchhhhhhhhhcCCCCCCCCcccCCCceeEEecceeeeecchhhhhccccCCceEEeecc
Q 000523 799 GNVQLSTLGGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGV 878 (1445)
Q Consensus 799 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 878 (1445)
.. . ... .+.-++++|+++.+.. .+++.+|+|+
T Consensus 248 -----------~~---------------~----~~~--------~~~~l~~~~l~~~~~~----------~~~~~~l~~i 279 (500)
T TIGR02633 248 -----------HE---------------P----HEI--------GDVILEARNLTCWDVI----------NPHRKRVDDV 279 (500)
T ss_pred -----------cc---------------c----cCC--------CCceEEEeCCcccccc----------cccccccccc
Confidence 00 0 000 0012556666654310 0123589999
Q ss_pred eEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc----ccccceEEEeccCC---CCCCCCCHHH
Q 000523 879 SGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IHSPFVTIYE 951 (1445)
Q Consensus 879 s~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d---~~~~~lTv~E 951 (1445)
|++|++||+++|+|||||||||||++|+|..++ +.+|+|.++|.+... ...++.+||++|+. .+++.+||+|
T Consensus 280 s~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~ 358 (500)
T TIGR02633 280 SFSLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGK 358 (500)
T ss_pred eeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHH
Confidence 999999999999999999999999999998752 147999999987632 12345689999995 4788899999
Q ss_pred HHHHHHH--hcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000523 952 SLLFSAW--LRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1445)
Q Consensus 952 ~l~f~~~--lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsg 1028 (1445)
++.++.. ............++.++++++.+++.+ ..+.. +..||||||||++||++|+.+|++|+|||||+|
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~ 433 (500)
T TIGR02633 359 NITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLP-----IGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRG 433 (500)
T ss_pred HhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCc-----cccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCC
Confidence 9987532 111011122334456889999999964 45655 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCC
Q 000523 1029 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1085 (1445)
Q Consensus 1029 LD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~ 1085 (1445)
||+.++..+++.|++++++|.|||++|||++ ++.+.+|++++|++ |+++..++..
T Consensus 434 LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 488 (500)
T TIGR02633 434 VDVGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVNH 488 (500)
T ss_pred cCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 9999999999999999888999999999986 57889999999985 7888877653
No 31
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-62 Score=612.35 Aligned_cols=451 Identities=21% Similarity=0.308 Sum_probs=341.9
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+++.+
T Consensus 18 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~ 94 (501)
T PRK11288 18 KALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPEM 94 (501)
T ss_pred EEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCCC
Confidence 4999999999999999999999999999999999999998 9999999988754321 35799999998889999
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+||+.++......+.. + ..+....++++++.+||++..+..+
T Consensus 95 tv~~~l~~~~~~~~~~~~--------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~----- 138 (501)
T PRK11288 95 TVAENLYLGQLPHKGGIV--------------------N-----------RRLLNYEAREQLEHLGVDIDPDTPL----- 138 (501)
T ss_pred CHHHHHHhcccccccCCC--------------------C-----------HHHHHHHHHHHHHHcCCCCCcCCch-----
Confidence 999999985321000000 0 0011234567899999986665544
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.++||+|++|++|
T Consensus 139 ~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiiitHd~~~~~~~~d~i~~l~~G 216 (501)
T PRK11288 139 KYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-E-GRVILYVSHRMEEIFALCDAITVFKDG 216 (501)
T ss_pred hhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 3 455666888889999999999999999
Q ss_pred eEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHhhcCC
Q 000523 402 QIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELRTP 481 (1445)
Q Consensus 402 ~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 481 (1445)
+++..++..+. .+.++..+.
T Consensus 217 ~i~~~~~~~~~-------------------------------------------~~~~~~~~~----------------- 236 (501)
T PRK11288 217 RYVATFDDMAQ-------------------------------------------VDRDQLVQA----------------- 236 (501)
T ss_pred EEEeecCcccc-------------------------------------------CCHHHHHHH-----------------
Confidence 99865421000 000000000
Q ss_pred cccccccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccchhhHHH
Q 000523 482 FDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAGAT 561 (1445)
Q Consensus 482 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~~g~l 561 (1445)
+. . .. .
T Consensus 237 -----------------------------------------------------------~~--~--~~-~---------- 242 (501)
T PRK11288 237 -----------------------------------------------------------MV--G--RE-I---------- 242 (501)
T ss_pred -----------------------------------------------------------hc--C--CC-c----------
Confidence 00 0 00 0
Q ss_pred HHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Q 000523 562 FFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQYA 641 (1445)
Q Consensus 562 ff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rff~~~~ 641 (1445)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHHhcCCcc
Q 000523 642 LLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGHSW 721 (1445)
Q Consensus 642 ~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~~~ 721 (1445)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeccccccccccccCCcc
Q 000523 722 KKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGGNV 801 (1445)
Q Consensus 722 ~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 801 (1445)
. .. ..
T Consensus 243 ~------------------~~--------------------------------~~------------------------- 247 (501)
T PRK11288 243 G------------------DI--------------------------------YG------------------------- 247 (501)
T ss_pred c------------------cc--------------------------------cc-------------------------
Confidence 0 00 00
Q ss_pred ccccCCCCCCccccccccchhhhhhhhhcCCCCCCCCcccCCCceeEEecceeeeecchhhhhccccCCceEEeecceEE
Q 000523 802 QLSTLGGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGA 881 (1445)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~ 881 (1445)
.. + .. ..+..+.++|+++. .+++|+|++
T Consensus 248 --------~~--~-------------------~~------~~~~~l~~~~~~~~-----------------~~l~~isl~ 275 (501)
T PRK11288 248 --------YR--P-------------------RP------LGEVRLRLDGLKGP-----------------GLREPISFS 275 (501)
T ss_pred --------cc--c-------------------cC------CCCcEEEEeccccC-----------------CcccceeEE
Confidence 00 0 00 00113555665421 379999999
Q ss_pred eeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc----ccccceEEEeccCC---CCCCCCCHHHHHH
Q 000523 882 FRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IHSPFVTIYESLL 954 (1445)
Q Consensus 882 i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d---~~~~~lTv~E~l~ 954 (1445)
|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++ .+++.+|+.|++.
T Consensus 276 i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~ 353 (501)
T PRK11288 276 VRAGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNIN 353 (501)
T ss_pred EeCCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhc
Confidence 99999999999999999999999999875 458999999976532 12245689999985 4788899999998
Q ss_pred HHHHhcCCC-C--CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000523 955 FSAWLRLSP-E--VDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1030 (1445)
Q Consensus 955 f~~~lr~~~-~--~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD 1030 (1445)
+........ . ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|++|+|||||+|||
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD 428 (501)
T PRK11288 354 ISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGID 428 (501)
T ss_pred cccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCC
Confidence 753221100 0 01222345678899999994 5666664 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCCCc
Q 000523 1031 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGRH 1087 (1445)
Q Consensus 1031 ~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~~~ 1087 (1445)
+.++..+++.|+++++.|.|||+++||+. ++.+.+|++++|++ |++++.|..++.
T Consensus 429 ~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~~ 483 (501)
T PRK11288 429 VGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQA 483 (501)
T ss_pred HhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEccccC
Confidence 99999999999999888999999999986 58889999999985 789999987643
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-61 Score=599.26 Aligned_cols=450 Identities=18% Similarity=0.285 Sum_probs=340.0
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGE 240 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1445)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 35999999999999999999999999999999999999998 9999999998754322 3569999999888899
Q ss_pred CCHHHHHHHhHH-hcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 241 MTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 241 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
+||+||+.++.. ..+.... ..+....++++++.+||++..+..+
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 132 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVD--------------------------------QDKMYRDTKAIFDELDIDIDPRAKV--- 132 (491)
T ss_pred CCHHHHhhcccccccccccC--------------------------------HHHHHHHHHHHHHHcCCCCCccCch---
Confidence 999999987531 1110000 0001124567889999987666554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
..|||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|++++. . +.+|+.++|+..++.+.||+|++|+
T Consensus 133 --~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 133 --ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-R-GCGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3 4456668889999999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHhhc
Q 000523 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 479 (1445)
+|+++..|+.+++.. .+..+.
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 229 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIAM--------------- 229 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHHH---------------
Confidence 999998876532100 000000
Q ss_pred CCcccccccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccchhhH
Q 000523 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1445)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~~g 559 (1445)
+. + ..
T Consensus 230 -------------------------------------------------------------~~--~--~~---------- 234 (491)
T PRK10982 230 -------------------------------------------------------------MV--G--RS---------- 234 (491)
T ss_pred -------------------------------------------------------------Hh--C--CC----------
Confidence 00 0 00
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCchHHHHHH
Q 000523 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1445)
Q Consensus 560 ~lff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rff~~ 639 (1445)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHHhcCC
Q 000523 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1445)
Q Consensus 640 ~~~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~ 719 (1445)
.
T Consensus 235 ---------------------------------------------------~---------------------------- 235 (491)
T PRK10982 235 ---------------------------------------------------L---------------------------- 235 (491)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred cccccccCCccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeccccccccccccCC
Q 000523 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1445)
Q Consensus 720 ~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1445)
.. . + +
T Consensus 236 --~~-----------------~-------------------------------~--~----------------------- 240 (491)
T PRK10982 236 --TQ-----------------R-------------------------------F--P----------------------- 240 (491)
T ss_pred --cc-----------------c-------------------------------c--c-----------------------
Confidence 00 0 0 0
Q ss_pred ccccccCCCCCCccccccccchhhhhhhhhcCCCCCCCCcccCCCceeEEecceeeeecchhhhhccccCCceEEeecce
Q 000523 800 NVQLSTLGGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVS 879 (1445)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs 879 (1445)
. . ... + .+..+.++|+++.. +.+|+|||
T Consensus 241 ----------~----------------~-----~~~-----~-~~~~i~~~~l~~~~---------------~~~l~~vs 268 (491)
T PRK10982 241 ----------D----------------K-----ENK-----P-GEVILEVRNLTSLR---------------QPSIRDVS 268 (491)
T ss_pred ----------c----------------c-----cCC-----C-CCcEEEEeCccccc---------------Ccccceee
Confidence 0 0 000 0 01136677776541 13899999
Q ss_pred EEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCCC---CCCCCCHHHH
Q 000523 880 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQNDI---HSPFVTIYES 952 (1445)
Q Consensus 880 ~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d~---~~~~lTv~E~ 952 (1445)
+.|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+.. +++.+|+.++
T Consensus 269 l~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 346 (491)
T PRK10982 269 FDLHKGEILGIAGLVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFN 346 (491)
T ss_pred EEEeCCcEEEEecCCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHh
Confidence 9999999999999999999999999999875 4589999999776431 12455899999853 5778888777
Q ss_pred HHHHHH--hcCCCC-CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000523 953 LLFSAW--LRLSPE-VDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1445)
Q Consensus 953 l~f~~~--lr~~~~-~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsg 1028 (1445)
..+... ...... ......++.++++++.+++. +..+.. +..|||||||||+||++|+.+|+||+|||||+|
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~illLDEPt~g 421 (491)
T PRK10982 347 SLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRG 421 (491)
T ss_pred eehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcc
Confidence 433211 000001 11223345678889999985 344554 457999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCC
Q 000523 1029 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1085 (1445)
Q Consensus 1029 LD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~ 1085 (1445)
||+.++..+++.|+++.+.|+|||++||+++ ++.+.+|++++|++ |+++..++..
T Consensus 422 LD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 422 IDVGAKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred cChhHHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 9999999999999999888999999999986 57889999999986 7888777654
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3.1e-60 Score=591.95 Aligned_cols=214 Identities=19% Similarity=0.302 Sum_probs=166.1
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|+++.+. ++.+|+|+|+.|++||+++|+||||||||||+++|+|..+. ..+|+|.++|.+.
T Consensus 260 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~ 325 (490)
T PRK10938 260 RIVLNNGVVSYN-------------DRPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRR 325 (490)
T ss_pred eEEEeceEEEEC-------------CeeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccC
Confidence 377888887763 23599999999999999999999999999999999996531 1479999999764
Q ss_pred Cc----ccccceEEEeccCCCCCC--CCCHHHHHHHHHHh--cCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000523 926 KQ----ETFARISGYCEQNDIHSP--FVTIYESLLFSAWL--RLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 996 (1445)
Q Consensus 926 ~~----~~~~~~~gyv~Q~d~~~~--~lTv~E~l~f~~~l--r~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 996 (1445)
.. ...++.+||++|++.+.. ..|+++++.+.... ....... ...++.++++++.++|.+ ..+.. +
T Consensus 326 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~-----~ 399 (490)
T PRK10938 326 GSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAP-----F 399 (490)
T ss_pred CCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCc-----h
Confidence 21 123467999999875543 35677766543211 1111111 223456889999999986 66665 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCccHHHHH-hhceEeEEec
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFE-AFDELFLMKR 1074 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~Hqps~~i~~-~fD~v~~l~~ 1074 (1445)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++| .|||+++|+++ ++.+ .+|++++|++
T Consensus 400 ~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~ 478 (490)
T PRK10938 400 HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD 478 (490)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC
Confidence 5799999999999999999999999999999999999999999999998765 46999999986 4655 5899999986
Q ss_pred CcEEEEE
Q 000523 1075 GGQEIYV 1081 (1445)
Q Consensus 1075 gG~~~y~ 1081 (1445)
|+++..
T Consensus 479 -G~i~~~ 484 (490)
T PRK10938 479 -GDIYRY 484 (490)
T ss_pred -CceEEe
Confidence 666654
No 34
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.3e-58 Score=575.88 Aligned_cols=201 Identities=20% Similarity=0.283 Sum_probs=163.9
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-+.++|+++.+. ++.+|+|||++|++||+++|+||||||||||+++|+|... +.+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECC-c-
Confidence 478889887763 2469999999999999999999999999999999999875 4589999854 1
Q ss_pred CcccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHH
Q 000523 926 KQETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQ 1003 (1445)
Q Consensus 926 ~~~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGq 1003 (1445)
..+||++|+. .+++.+||.|++.+....+. .... ....+++++.+++.+ ..+.. +..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIK---VGNR--EIPSRAYVGRFNFKGGDQQKK-----VGVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhccccc---cccc--HHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999986 67788999999987643221 1111 122456899999964 44554 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEE-EEc
Q 000523 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVG 1082 (1445)
Q Consensus 1004 rqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~-y~G 1082 (1445)
||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. .|||++||++. .+.+.+|++++|++||++. +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP---GCAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC---CeEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 48999999986 5778899999998767776 555
Q ss_pred C
Q 000523 1083 P 1083 (1445)
Q Consensus 1083 ~ 1083 (1445)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 35
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=7.6e-58 Score=509.60 Aligned_cols=470 Identities=24% Similarity=0.323 Sum_probs=362.5
Q ss_pred ccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCcCcc-------ceEEEEcC
Q 000523 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFVPQ-------RTAAYISQ 233 (1445)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~~~-------~~~~yv~Q 233 (1445)
....++++|||.+++||.+||+|.||||||-..+.+.|+++.. ...+|+|.++|+++-....+ ..|+.++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 3456999999999999999999999999999999999999763 35589999999997544322 47999999
Q ss_pred CC--CCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccc
Q 000523 234 HD--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1445)
Q Consensus 234 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1445)
++ .+.|-.|+..-+.-..+++.. .....++.++-++|+..|+++.
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------------------------------~~~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------------------------------LSRAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------------------------------ccHHHHHHHHHHHHHHcCCCch
Confidence 97 466767777766555444310 1112234567788999999876
Q ss_pred ccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhh
Q 000523 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1445)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1445)
...+ +.++..|||||||||.||.||+.+|++|+-||||++||.....+|.+.|+++-. .-+..++.|+|+..-+-.+
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~-~~gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQA-ELGMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHH-HhCcEEEEEeccHHHHHHh
Confidence 5432 467788999999999999999999999999999999999999999999999865 4567777899999999999
Q ss_pred cCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhh
Q 000523 392 FDDIILLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVG 471 (1445)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (1445)
+|+|+||.+|+++++|+.+++.. .|.+ ||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHH-----------------
Confidence 99999999999999998876632 1110 000
Q ss_pred hhhHHhhcCCcccccccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccc
Q 000523 472 QKISDELRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTV 551 (1445)
Q Consensus 472 ~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~ 551 (1445)
|.++. ..+.
T Consensus 255 ---------------------------------------r~Ll~-----------------------------aeP~--- 263 (534)
T COG4172 255 ---------------------------------------RKLLA-----------------------------AEPS--- 263 (534)
T ss_pred ---------------------------------------HHHHh-----------------------------cCCC---
Confidence 00000 0000
Q ss_pred cccchhhHHHHHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCC
Q 000523 552 TDGGIFAGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDS 631 (1445)
Q Consensus 552 ~~~~~~~g~lff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~ 631 (1445)
T Consensus 264 -------------------------------------------------------------------------------- 263 (534)
T COG4172 264 -------------------------------------------------------------------------------- 263 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHH
Q 000523 632 NAGRFFKQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAI 711 (1445)
Q Consensus 632 ~~~rff~~~~~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al 711 (1445)
T Consensus 264 -------------------------------------------------------------------------------- 263 (534)
T COG4172 264 -------------------------------------------------------------------------------- 263 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhcCCcccccccCCccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceecccccc
Q 000523 712 VANEFLGHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESN 791 (1445)
Q Consensus 712 ~~nef~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~~~~~~~~~~~ 791 (1445)
|
T Consensus 264 -----------------------------g-------------------------------------------------- 264 (534)
T COG4172 264 -----------------------------G-------------------------------------------------- 264 (534)
T ss_pred -----------------------------C--------------------------------------------------
Confidence 0
Q ss_pred ccccccCCccccccCCCCCCccccccccchhhhhhhhhcCCCCCCCCcccCCCceeEEecceeeeecchhhhhccccCCc
Q 000523 792 EQDDRIGGNVQLSTLGGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDK 871 (1445)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 871 (1445)
. . .+ ..+..|.-+..+|+...++.++.+-.. ..+.
T Consensus 265 -------~----------~--~p------------------------~~~~~~~ll~~~~v~v~f~i~~g~~~r--~~~~ 299 (534)
T COG4172 265 -------D----------P--PP------------------------LPEDAPVLLEVEDLRVWFPIKGGFLRR--TVDH 299 (534)
T ss_pred -------C----------C--CC------------------------CCCCCCceEEecceEEEEecCCccccc--cchh
Confidence 0 0 00 000011223444444333332211000 1123
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc------ccccceEEEeccCCC--C
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ------ETFARISGYCEQNDI--H 943 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~--~ 943 (1445)
..++++||++.++||.+||+|.||||||||=.+|.+... .+|+|.++|.++.. ..+++.+-.|+||+. +
T Consensus 300 ~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~---s~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSL 376 (534)
T COG4172 300 LRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIP---SQGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSL 376 (534)
T ss_pred eEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcC---cCceEEECCccccccChhhhhhhhhhceEEEeCCCCCC
Confidence 569999999999999999999999999999999999875 35999999988753 235677889999975 7
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEE
Q 000523 944 SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1022 (1445)
Q Consensus 944 ~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illL 1022 (1445)
.|.+||.|-+.-+.....+ ..+..++++++.++|+.+||++- ++.. +..+|||||||++|||||+-+|++++|
T Consensus 377 sPRmtV~qII~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAliLkP~~i~L 450 (534)
T COG4172 377 SPRMTVGQIIEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARALILKPELILL 450 (534)
T ss_pred CcccCHHHHhhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHHhcCCcEEEe
Confidence 8999999988877665543 46778899999999999999864 2322 578999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1023 DEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1023 DEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
|||||.||-.-+.+|.++|+++.+ .|.+-++++||... +-.+||+|++|++ |++|..||.
T Consensus 451 DEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~V-vrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 451 DEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLAV-VRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred cCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHHH-HHHhhceEEEEeC-CEEeeeCCH
Confidence 999999999999999999999965 48999999999874 7889999999985 899999996
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-58 Score=577.09 Aligned_cols=198 Identities=18% Similarity=0.261 Sum_probs=164.2
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 488899988763 2359999999999999999999999999999999999865 45899999873
Q ss_pred CcccccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHH
Q 000523 926 KQETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 926 ~~~~~~~~~gyv~Q~d~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgG 1002 (1445)
+.+||++|+.. +.+.+|++|++.+. ... . ..++.++++++.+++. +..+.. +..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~---~~~-~----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQW---RQE-G----DDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHh---ccC-C----ccHHHHHHHHHHcCCChhHhcCc-----ccccCHH
Confidence 45899999864 45679999998642 111 1 1134577899999984 555655 4579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEE-EE
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YV 1081 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~-y~ 1081 (1445)
||||++||++|+.+|+||+|||||+|||+.+...+++.|+++ +.|||++||++. .+.+.+|++++|++ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999986 459999999986 57788999999986 5666 87
Q ss_pred cCC
Q 000523 1082 GPL 1084 (1445)
Q Consensus 1082 G~~ 1084 (1445)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=4.6e-57 Score=569.67 Aligned_cols=201 Identities=18% Similarity=0.273 Sum_probs=163.6
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|+++.+. ++.+|+|||+.|++||+++|+||||||||||+++|+|... +.+|+|.+++ +
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~-~- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGE-T- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECC-c-
Confidence 478888887763 2469999999999999999999999999999999999865 4589999854 1
Q ss_pred CcccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHH
Q 000523 926 KQETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQ 1003 (1445)
Q Consensus 926 ~~~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGq 1003 (1445)
..+||++|+. .+++.+||.|++.+...... .... +..+.++++.+++.+ ..+.. +..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKK-----VGQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999986 47788999999988642211 1111 123457899999864 44554 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEE-EEc
Q 000523 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVG 1082 (1445)
Q Consensus 1004 rqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~-y~G 1082 (1445)
||||+||++|+.+|++|+|||||+|||+.++..+++.|+++. .|||++||++. .+...+|++++|++||+++ +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 48999999986 5778899999998767776 555
Q ss_pred C
Q 000523 1083 P 1083 (1445)
Q Consensus 1083 ~ 1083 (1445)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 38
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-55 Score=556.22 Aligned_cols=197 Identities=22% Similarity=0.346 Sum_probs=160.3
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|... +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 478889887763 2469999999999999999999999999999999999875 45899998741
Q ss_pred CcccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHH
Q 000523 926 KQETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 926 ~~~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgG 1002 (1445)
..+||++|+. .+.+..|+.+++.- . .. ...+..+.++++.+++.+ ..+.. +..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~-----~~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEE-----TRRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCc-----hhhCCHH
Confidence 2589999974 34456677776531 1 11 112345788999999963 45555 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEE-EE
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YV 1081 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~-y~ 1081 (1445)
|||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++ +.|||+++||+. .+...+|++++|++ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 349999999986 47788999999986 6776 88
Q ss_pred cCC
Q 000523 1082 GPL 1084 (1445)
Q Consensus 1082 G~~ 1084 (1445)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 39
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=6.7e-55 Score=557.03 Aligned_cols=202 Identities=23% Similarity=0.326 Sum_probs=163.1
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-+.++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|... +.+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 478888887763 2469999999999999999999999999999999999865 45899998 4321
Q ss_pred CcccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHH
Q 000523 926 KQETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLSTEQ 1003 (1445)
Q Consensus 926 ~~~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSgGq 1003 (1445)
.+||++|+. .+++.+||.|++.+..... .... ....+.++++.+++. +..+.. ++.|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVNG--RPRHVLGYLQDFLFHPKRAMTP-----VKALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhcccc---cccc--hHHHHHHHHHhcCCCHHHHhCh-----hhhCCHHH
Confidence 489999975 5788899999998753211 0111 123467888888885 345554 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe-cCcEEEEEc
Q 000523 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-RGGQEIYVG 1082 (1445)
Q Consensus 1004 rqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~-~gG~~~y~G 1082 (1445)
||||+||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++|||+. .+...+|++++|+ +|.-..|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 459999999986 4778899999997 554456666
Q ss_pred CC
Q 000523 1083 PL 1084 (1445)
Q Consensus 1083 ~~ 1084 (1445)
..
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 64
No 40
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=7.7e-55 Score=546.48 Aligned_cols=211 Identities=20% Similarity=0.235 Sum_probs=172.1
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-++++|+++.++ + ..|+++|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----
Confidence 367788876652 1 24899999999999999999999999999999999876 458999885
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000523 926 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1005 (1445)
Q Consensus 926 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1445)
..++|++|+..+.+.+||+|++.+.... ... ...++++++.++|.+..+.. +..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~-----~~~---~~~~~~~L~~l~l~~~~~~~-----~~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDD-----LGS---SYYKSEIIKPLQLERLLDKN-----VKDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhh-----cCh---HHHHHHHHHHCCCHHHHhCC-----cccCCHHHHH
Confidence 1489999998888899999999875211 111 12467899999998877766 4579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1006 Rl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
||+||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++||+. .+...+|++++|+ |++...|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~--~~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE--GEPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc--Ccceeeeec
Confidence 999999999999999999999999999999999999999764 899999999986 4778899999996 377777764
Q ss_pred CCc---hhhHHHHHHhC
Q 000523 1085 GRH---SCHLISYFEAI 1098 (1445)
Q Consensus 1085 ~~~---~~~~~~yF~~~ 1098 (1445)
... ...+-.|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 321 12345566766
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.8e-54 Score=508.04 Aligned_cols=449 Identities=23% Similarity=0.370 Sum_probs=348.1
Q ss_pred ccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCcc----ceEEEEcCCCCCC
Q 000523 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHI 238 (1445)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1445)
...++|+|||+++++||+++|+|.||||||||+|+|+|.++|+ +|+|.+||++..-..++ .-|+.|.|+..+.
T Consensus 19 ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~ 95 (500)
T COG1129 19 GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLV 95 (500)
T ss_pred CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhcc
Confidence 3456999999999999999999999999999999999999999 99999999988765553 4689999999999
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
|++||.||+-++...... ... .+..+.+..+..+|+.+|++...++.|++
T Consensus 96 p~LsVaeNifLgre~~~~---~g~---------------------------id~~~m~~~A~~~l~~lg~~~~~~~~v~~ 145 (500)
T COG1129 96 PNLSVAENIFLGREPTRR---FGL---------------------------IDRKAMRRRARELLARLGLDIDPDTLVGD 145 (500)
T ss_pred CCccHHHHhhcccccccC---CCc---------------------------cCHHHHHHHHHHHHHHcCCCCChhhhhhh
Confidence 999999999887543220 000 01122334567789999997557888775
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
||+||||-|.|||||..++++++|||||++|+...+..+++.++++. ..+..+|.|+|..+|++++||+|.||
T Consensus 146 -----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk--~~Gv~ii~ISHrl~Ei~~i~DritVl 218 (500)
T COG1129 146 -----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLK--AQGVAIIYISHRLDEVFEIADRITVL 218 (500)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHH--hCCCEEEEEcCcHHHHHHhcCEEEEE
Confidence 99999999999999999999999999999999999999999999975 45777788999999999999999999
Q ss_pred cCCeEEEecCh-hHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHh
Q 000523 399 SDGQIVYQGPR-ELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDE 477 (1445)
Q Consensus 399 ~~G~iv~~G~~-~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (1445)
.||+.+..++. .+.- .+++.
T Consensus 219 RDG~~v~~~~~~~~~~--------------------------------------------~~~lv--------------- 239 (500)
T COG1129 219 RDGRVVGTRPTAAETS--------------------------------------------EDELV--------------- 239 (500)
T ss_pred eCCEEeeecccccCCC--------------------------------------------HHHHH---------------
Confidence 99999876652 2110 00000
Q ss_pred hcCCcccccccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccchh
Q 000523 478 LRTPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIF 557 (1445)
Q Consensus 478 l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~ 557 (1445)
T Consensus 240 -------------------------------------------------------------------------------- 239 (500)
T COG1129 240 -------------------------------------------------------------------------------- 239 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCchHHHH
Q 000523 558 AGATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFF 637 (1445)
Q Consensus 558 ~g~lff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rff 637 (1445)
-.|+|
T Consensus 240 ------------------------------------------------------------------~~MvG--------- 244 (500)
T COG1129 240 ------------------------------------------------------------------RLMVG--------- 244 (500)
T ss_pred ------------------------------------------------------------------HHhhC---------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHHhc
Q 000523 638 KQYALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFL 717 (1445)
Q Consensus 638 ~~~~~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~ 717 (1445)
T Consensus 245 -------------------------------------------------------------------------------- 244 (500)
T COG1129 245 -------------------------------------------------------------------------------- 244 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcccccccCCccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceecccccccccccc
Q 000523 718 GHSWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRI 797 (1445)
Q Consensus 718 ~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~~~~~~~~~~~~~~~~~ 797 (1445)
..... . | +
T Consensus 245 -r~~~~------------------~------------------------------~--~--------------------- 252 (500)
T COG1129 245 -RELED------------------L------------------------------F--P--------------------- 252 (500)
T ss_pred -cchhh------------------h------------------------------c--c---------------------
Confidence 00000 0 0 0
Q ss_pred CCccccccCCCCCCccccccccchhhhhhhhhcCCCCCCCCcccCCCceeEEecceeeeecchhhhhccccCCceEEeec
Q 000523 798 GGNVQLSTLGGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNG 877 (1445)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 877 (1445)
. . ... ...+..+++++++.. ..++|
T Consensus 253 -----------------------------~--~-~~~------~~~~~~l~v~~l~~~-----------------~~~~d 277 (500)
T COG1129 253 -----------------------------E--P-PEE------GIGEPVLEVRNLSGG-----------------GKVRD 277 (500)
T ss_pred -----------------------------c--c-ccc------CCCCcEEEEecCCCC-----------------CceeC
Confidence 0 0 000 000112444444211 15789
Q ss_pred ceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcc----cccceEEEeccCC---CCCCCCCHH
Q 000523 878 VSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPFVTIY 950 (1445)
Q Consensus 878 vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~Q~d---~~~~~lTv~ 950 (1445)
|||++++||++||-|-=|||+|-|+++|.|... ...|+|.+||.+.... ..+.-++|||.|. -++..++|.
T Consensus 278 vSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~ 355 (500)
T COG1129 278 VSFTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIA 355 (500)
T ss_pred ceeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHH
Confidence 999999999999999999999999999999654 3589999999976542 3455689999984 467889999
Q ss_pred HHHHHHHHhcCCC--CCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000523 951 ESLLFSAWLRLSP--EVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1027 (1445)
Q Consensus 951 E~l~f~~~lr~~~--~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTs 1027 (1445)
||+.++...+... -.+....++.+++..+.+++... .+.. +..||||++|||.|||.|..+|+||+|||||.
T Consensus 356 ~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~vLilDEPTR 430 (500)
T COG1129 356 ENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPKVLILDEPTR 430 (500)
T ss_pred HheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCCEEEECCCCc
Confidence 9998873323221 24455556678889999887532 2222 56899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1028 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1028 gLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
|+|..+..+|.++|++++++|++||+++-+.. |+..+||||++|++ |+++-.
T Consensus 431 GIDVGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~e 482 (500)
T COG1129 431 GIDVGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVGE 482 (500)
T ss_pred CcccchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEEE
Confidence 99999999999999999999999999999875 79999999999985 787653
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=9.2e-53 Score=536.13 Aligned_cols=200 Identities=18% Similarity=0.260 Sum_probs=157.8
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|+++.+. +++.+|+|+|+.|++|++++|+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 478899988763 12359999999999999999999999999999999999875 45799998652
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHH
Q 000523 926 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 926 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~LSgGqr 1004 (1445)
..+||++|+. ...+++.++..+......+ ... ++.+.++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~-~~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHH--VDGLDLSSNPLLYMMRCFP-GVP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEeccc--cccCCcchhHHHHHHHhcC-CCC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 3589999975 2445666654322111111 111 234678999999974 44444 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEE-EEcC
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI-YVGP 1083 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~-y~G~ 1083 (1445)
|||+||++|+.+|++|+|||||+|||+.+...+++.|++. +.|||++||++. .+...+|++++|.+ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF---QGGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999999888765 349999999986 47788999999985 6777 7776
Q ss_pred C
Q 000523 1084 L 1084 (1445)
Q Consensus 1084 ~ 1084 (1445)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 4
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=1.4e-52 Score=511.50 Aligned_cols=218 Identities=27% Similarity=0.322 Sum_probs=172.2
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHH
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
+++|+|+|+++.+|+.++|||+||||||||||+|+|.+.|+ +|+|...+. -.++|++|++...+..||.
T Consensus 16 ~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~~--------~~v~~l~Q~~~~~~~~tv~ 84 (530)
T COG0488 16 RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPKG--------LRVGYLSQEPPLDPEKTVL 84 (530)
T ss_pred ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecCC--------ceEEEeCCCCCcCCCccHH
Confidence 45999999999999999999999999999999999999999 999998652 3699999999999999999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHH---HHHHH-HhhhhhhHhHHHHHHHHHcCCcccccccccccc
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDID---VYMKA-IATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~---~~~~~-~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1445)
+.+.-+..- .++...+..... ...++++.. .+... ...++.+.+.+++.+|..||++.. ++.++
T Consensus 85 ~~v~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~--- 152 (530)
T COG0488 85 DYVIEGFGE-----LRELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS--- 152 (530)
T ss_pred HHHHhhhHH-----HHHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh---
Confidence 999865421 122222221111 112222111 11111 233456677889999999999876 65555
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000523 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1445)
Q Consensus 321 ~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1445)
.||||||.||+||++|+.+|++|+||||||+||..+..++.+.|++ ..+ ++|.++|++..+.+.|++|+-++.
T Consensus 153 --~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~----~~g-tviiVSHDR~FLd~V~t~I~~ld~ 225 (530)
T COG0488 153 --SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKR----YPG-TVIVVSHDRYFLDNVATHILELDR 225 (530)
T ss_pred --hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh----CCC-cEEEEeCCHHHHHHHhhheEEecC
Confidence 5999999999999999999999999999999999999999999986 234 666689999999999999999999
Q ss_pred CeE-EEecChhHH
Q 000523 401 GQI-VYQGPRELV 412 (1445)
Q Consensus 401 G~i-v~~G~~~~~ 412 (1445)
|++ .|.|.++..
T Consensus 226 g~l~~y~Gny~~~ 238 (530)
T COG0488 226 GKLTPYKGNYSSY 238 (530)
T ss_pred CceeEecCCHHHH
Confidence 987 577766644
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=8.7e-50 Score=461.52 Aligned_cols=457 Identities=22% Similarity=0.315 Sum_probs=354.2
Q ss_pred cceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCcc----ceEEEEcCCCCCCC
Q 000523 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHIG 239 (1445)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1445)
...+++|||+++++||+.||+|.||||||||+++|.|.++|+ +|+|.++|+++.-..|+ .-||.|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 456999999999999999999999999999999999999999 99999999998655553 46899999999999
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
++||.||+..+..-... .+ .+..+...+++++.+.+||+-..|..|++
T Consensus 93 ~lTV~ENiiLg~e~~~~-~~------------------------------~~~~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSKG-GL------------------------------IDRRQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCccccc-cc------------------------------cCHHHHHHHHHHHHHHhCCCCCccceeec-
Confidence 99999999987632100 00 00112334577888999999888888876
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
||=||||||.|-++|+.+|++|+|||||+-|-+....++++.|+++.. .+.+||.|+|-..|+.+.|||+.||.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~--~G~tIi~ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA--EGKTIIFITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH--CCCEEEEEeccHHHHHHhhCeeEEEe
Confidence 999999999999999999999999999999999999999999999864 35566669999999999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhcCchhhhhhhhccCCCCccCCHHHHHHHHHhchhhhhhHHhhc
Q 000523 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVTSRKDQRQYWAHKEKPYRFVTVQEFAEAFQSFHVGQKISDELR 479 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 479 (1445)
+|+++-.-++ . .+ .+.+++++.
T Consensus 215 ~Gkvvgt~~~--~--------------~~---------------------------~t~~ela~l--------------- 236 (501)
T COG3845 215 RGKVVGTVDP--V--------------AE---------------------------TTEEELAEL--------------- 236 (501)
T ss_pred CCeEEeeecC--C--------------CC---------------------------CCHHHHHHH---------------
Confidence 9998633210 0 00 000000000
Q ss_pred CCcccccccccccccccccCcHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccchhhH
Q 000523 480 TPFDKSKSHRAALTTETYGVGKRELLKANISRELLLMKRNSFVYIFKLIQIAFVAVVYMTLFLRTKMHKDTVTDGGIFAG 559 (1445)
Q Consensus 480 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~r~~~~~~~~~~~~~i~ali~gt~f~~~~~~~~~~~~~~~~~g 559 (1445)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhhchhHHHhhhcCCcCchhHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCchHHHHHH
Q 000523 560 ATFFAITMVNFNGFSEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPVSFLEVAVWVFLSYYVVGYDSNAGRFFKQ 639 (1445)
Q Consensus 560 ~lff~~~~~~~~~~~~l~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~g~~~~~~rff~~ 639 (1445)
|+|
T Consensus 237 ------------------------------------------------------------------MvG----------- 239 (501)
T COG3845 237 ------------------------------------------------------------------MVG----------- 239 (501)
T ss_pred ------------------------------------------------------------------hcC-----------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhhcccCccchhHHHHHHHHHcHHHHHHHHHHHHHhcCC
Q 000523 640 YALLLGVNQMASALFRFIAVTGRNMVVANTFGSFALLVLLSLGGFILSREDIKKWWKWAYWCSPLTYAQNAIVANEFLGH 719 (1445)
Q Consensus 640 ~~~~~~~~~~~~~l~~~ia~~~~~~~vA~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~W~~~isP~~y~~~al~~nef~~~ 719 (1445)
.
T Consensus 240 -------------------------------------------------------------------------------~ 240 (501)
T COG3845 240 -------------------------------------------------------------------------------R 240 (501)
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred cccccccCCccccHHHHHhhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCcceeccccccccccccCC
Q 000523 720 SWKKFTQDSSETLGVQVLKSRGFFAHEYWYWLGLGALFGFVLLLNFAYTLALTFLDPFEKPRAVITEEIESNEQDDRIGG 799 (1445)
Q Consensus 720 ~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~g~l~~~~~~~~~~~~l~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1445)
. +.. +
T Consensus 241 ~---------------v~~-------------------------------------~----------------------- 245 (501)
T COG3845 241 E---------------VVL-------------------------------------R----------------------- 245 (501)
T ss_pred c---------------ccc-------------------------------------c-----------------------
Confidence 0 000 0
Q ss_pred ccccccCCCCCCccccccccchhhhhhhhhcCCCCCCCCcccCCCceeEEecceeeeecchhhhhccccCCceEEeecce
Q 000523 800 NVQLSTLGGSTDDIRGQQSSSQSLSLAEAEASRPKKKGMVLPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVS 879 (1445)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs 879 (1445)
.. . .... | .+..++++|++...+. ....+++||
T Consensus 246 ----------~~---------------~----~~~~-----p-g~~vL~V~~L~v~~~~------------~~~~v~~vs 278 (501)
T COG3845 246 ----------VV---------------K----PPST-----P-GEVVLEVEDLSVKDRR------------GVTAVKDVS 278 (501)
T ss_pred ----------cc---------------c----CCCC-----C-CCeEEEEeeeEeecCC------------CCceeeeee
Confidence 00 0 0000 0 0124666776644321 135799999
Q ss_pred EEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC-C---cc-cccceEEEeccCCC---CCCCCCHHH
Q 000523 880 GAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK-K---QE-TFARISGYCEQNDI---HSPFVTIYE 951 (1445)
Q Consensus 880 ~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~-~---~~-~~~~~~gyv~Q~d~---~~~~lTv~E 951 (1445)
|++++||++||.|..|-|-+.|+.+|+|..+. ..|+|.++|.+. . .. ..+.-+||||+|.. +.+.+|+.|
T Consensus 279 ~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~e 356 (501)
T COG3845 279 FEVRAGEIVGIAGVAGNGQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAE 356 (501)
T ss_pred eEEecCcEEEEEecCCCCHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHH
Confidence 99999999999999999999999999997653 359999999986 2 22 23346899999864 467899999
Q ss_pred HHHHHHHhcC----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000523 952 SLLFSAWLRL----SPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1027 (1445)
Q Consensus 952 ~l~f~~~lr~----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTs 1027 (1445)
|+.+...-+. ..-.+....+++..++++.++........ ..+.||||++||+-+||+|..+|++|+..+||.
T Consensus 357 N~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~~----~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTr 432 (501)
T COG3845 357 NLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPDA----PARSLSGGNQQKLILARELARRPDLLIAAQPTR 432 (501)
T ss_pred HhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCCc----chhhcCCcceehhhhhhhhccCCCEEEEcCCCc
Confidence 9987654221 11245566777889999999886322111 146899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCC
Q 000523 1028 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1085 (1445)
Q Consensus 1028 gLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~ 1085 (1445)
|||..+.+.|.+.|.+.++.|+.|++++-+.+ ++++++||+.+|.+ |+++...+..
T Consensus 433 GLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~ 488 (501)
T COG3845 433 GLDVGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPE 488 (501)
T ss_pred cccHHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceecccccc
Confidence 99999999999999999999999999999997 79999999999985 7998877764
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-43 Score=370.98 Aligned_cols=220 Identities=26% Similarity=0.419 Sum_probs=187.6
Q ss_pred cceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc----CccceEEEEcCCCCCCC
Q 000523 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF----VPQRTAAYISQHDNHIG 239 (1445)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----~~~~~~~yv~Q~d~~~~ 239 (1445)
..++|+|||++|++||+++|+|||||||||||++|.|+..++ +|+|.++|+++... ..++.+|+|+|+..+||
T Consensus 14 ~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP 90 (240)
T COG1126 14 DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP 90 (240)
T ss_pred CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccc
Confidence 456999999999999999999999999999999999999999 99999999765321 23578999999999999
Q ss_pred CCCHHHHHHHhHHh-cCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 240 EMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
++||.||+..+... ++ ...++++.++.++|+.+||.+.+|.+
T Consensus 91 HlTvleNv~lap~~v~~----------------------------------~~k~eA~~~A~~lL~~VGL~~ka~~y--- 133 (240)
T COG1126 91 HLTVLENVTLAPVKVKK----------------------------------LSKAEAREKALELLEKVGLADKADAY--- 133 (240)
T ss_pred cchHHHHHHhhhHHHcC----------------------------------CCHHHHHHHHHHHHHHcCchhhhhhC---
Confidence 99999999987421 11 11223445677889999999998865
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
+..|||||||||+|||||+.+|+++++|||||+|||....++.+.+++++. . +.+.+.++|.+..+.+.+|||+.|
T Consensus 134 --P~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~-e-GmTMivVTHEM~FAr~VadrviFm 209 (240)
T COG1126 134 --PAQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE-E-GMTMIIVTHEMGFAREVADRVIFM 209 (240)
T ss_pred --ccccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH-c-CCeEEEEechhHHHHHhhheEEEe
Confidence 456999999999999999999999999999999999999999999999985 3 455555889999999999999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHh
Q 000523 399 SDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQE 435 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~e 435 (1445)
++|+++.+|+++++ |..|.+....+|+..
T Consensus 210 d~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 210 DQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred eCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 99999999999876 345666666677654
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.4e-43 Score=368.51 Aligned_cols=214 Identities=25% Similarity=0.368 Sum_probs=189.2
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|++.++ +...+|+|||++|++||+++|+|||||||||||+||.+... +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 5677777665 35689999999999999999999999999999999999876 56899999996543
Q ss_pred ----cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000523 927 ----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 927 ----~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1445)
-...|+.+|+|+|+..+||++||.||+..+...- ...++++.++...+.|+.+||.+.+|.. +..||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----P~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAY-----PAQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhC-----ccccCcH
Confidence 2346788999999999999999999999875432 2345667777788999999999999887 4679999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
|||||+|||||+.+|+++++|||||.|||+...++.+.+++++++|.|.||+||.... .-+.+|||+.|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999875 6788999999985 8999999
Q ss_pred CC
Q 000523 1083 PL 1084 (1445)
Q Consensus 1083 ~~ 1084 (1445)
++
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 76
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.2e-42 Score=402.16 Aligned_cols=203 Identities=20% Similarity=0.260 Sum_probs=156.7
Q ss_pred CceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCc
Q 000523 844 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 923 (1445)
Q Consensus 844 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 923 (1445)
|..+.++|+++.++. +..++++++|-|.+++.+|++||||+|||||||++.|... +..|.+.-.-+
T Consensus 387 ~pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H 452 (614)
T KOG0927|consen 387 PPVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSH 452 (614)
T ss_pred CCeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--ccccccccccc
Confidence 345788999887752 2258999999999999999999999999999999999876 45677654332
Q ss_pred cCCcccccceEEEeccC--CCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 924 PKKQETFARISGYCEQN--DIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 924 ~~~~~~~~~~~gyv~Q~--d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
. .+++..|+ +.+.-..++-|+++=. ...+.+.+.+..++..+||+...+... .+.||+
T Consensus 453 ~--------~~~~y~Qh~~e~ldl~~s~le~~~~~--------~~~~~~~e~~r~ilgrfgLtgd~q~~p----~~~LS~ 512 (614)
T KOG0927|consen 453 N--------KLPRYNQHLAEQLDLDKSSLEFMMPK--------FPDEKELEEMRSILGRFGLTGDAQVVP----MSQLSD 512 (614)
T ss_pred c--------cchhhhhhhHhhcCcchhHHHHHHHh--------ccccchHHHHHHHHHHhCCCccccccc----hhhccc
Confidence 2 12233333 2222335666655421 111234455778999999985444331 578999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
|||+||..|+.++..|.||+|||||+|||..+...+-++|.+. ..+||+++||-.. |-...+++.+..+++...+.
T Consensus 513 Gqr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~ 588 (614)
T KOG0927|consen 513 GQRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWD 588 (614)
T ss_pred ccchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecC
Confidence 9999999999999999999999999999999999999999876 4689999999864 78889999999999999999
Q ss_pred cCC
Q 000523 1082 GPL 1084 (1445)
Q Consensus 1082 G~~ 1084 (1445)
|..
T Consensus 589 G~i 591 (614)
T KOG0927|consen 589 GDI 591 (614)
T ss_pred ccH
Confidence 874
No 48
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-41 Score=373.18 Aligned_cols=224 Identities=29% Similarity=0.375 Sum_probs=194.2
Q ss_pred ccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCC
Q 000523 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDN 236 (1445)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1445)
...++|+|||++|++|++.+|+|+||||||||++++.++..|+ +|+|.++|.++..+.. ++.+|+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 3467999999999999999999999999999999999999999 9999999988876543 478999999999
Q ss_pred CCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccc
Q 000523 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1445)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1445)
++...||.||+.|..+..+.. ..+.+.++.++|+.+||++.+|.+
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------------------------------k~ei~~RV~elLelVgL~dk~~~y- 138 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------------------------------KAEIKQRVAELLELVGLSDKADRY- 138 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhhhccC-
Confidence 999999999999998776531 123345788899999999888754
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000523 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1445)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1445)
+.+|||||||||+|||||+.+|+||++|||||+|||.|+..|.+.|+++-++ -+.+|+.++|.++-+-+.||||.
T Consensus 139 ----P~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~-lglTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 139 ----PAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRE-LGLTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred ----chhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHH-cCCEEEEEechHHHHHHHhhhhe
Confidence 4569999999999999999999999999999999999999999999998664 46666668999999999999999
Q ss_pred EecCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhhc
Q 000523 397 LLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEVT 437 (1445)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~ 437 (1445)
+|++|+++++|+..++. ..|.+.-...|+.+..
T Consensus 214 vm~~G~lvE~G~v~~vF--------~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEVF--------ANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHhh--------cCcchHHHHHHHHhhc
Confidence 99999999999998873 4566555556665544
No 49
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.3e-41 Score=389.58 Aligned_cols=223 Identities=30% Similarity=0.430 Sum_probs=193.4
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|++..+. .++.+|+||||+|++||++||+||||||||||||+|+|... +.+|+|.++|.+..
T Consensus 5 i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~--p~~G~i~i~G~~~~ 70 (293)
T COG1131 5 IEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLK--PTSGEILVLGYDVV 70 (293)
T ss_pred eeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEEcCEeCc
Confidence 45666665552 13679999999999999999999999999999999999887 46899999998865
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000523 927 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 927 ~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1445)
. ...++.+||++|++.+++.+||+|+|.|.+.++.+.. ...+++++++++.++|.+..+.. +++||+|||
T Consensus 71 ~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~k 142 (293)
T COG1131 71 KEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMK 142 (293)
T ss_pred cCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHH
Confidence 4 4567889999999999999999999999999987543 44556799999999999855544 468999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g-~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
|||+||+||+++|+++||||||+|||+.++..+++.|++++++| +||+++||+++ ++...||++++|++ |++++.|+
T Consensus 143 qrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~ 220 (293)
T COG1131 143 QRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGT 220 (293)
T ss_pred HHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 99999999999999999999999999999999999999999887 89999999997 68888999999985 89999997
Q ss_pred CCCchhhHHHHHHh
Q 000523 1084 LGRHSCHLISYFEA 1097 (1445)
Q Consensus 1084 ~~~~~~~~~~yF~~ 1097 (1445)
. .++...+..
T Consensus 221 ~----~~l~~~~~~ 230 (293)
T COG1131 221 P----EELKEKFGG 230 (293)
T ss_pred H----HHHHHhhcc
Confidence 5 455555544
No 50
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-41 Score=360.11 Aligned_cols=210 Identities=27% Similarity=0.413 Sum_probs=185.2
Q ss_pred cceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCC
Q 000523 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGE 240 (1445)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1445)
.+.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||+++.+.++ ++.+|||-|+-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 345999999999999999999999999999999999999999 9999999999887654 6899999999999999
Q ss_pred CCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccc
Q 000523 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1445)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1445)
+||.||+.+--.+++.. .++.+.+++++|+.+||+.. ...++.
T Consensus 90 ~Tv~eNIa~VP~L~~w~----------------------------------k~~i~~r~~ELl~lvgL~p~---~~~~Ry 132 (309)
T COG1125 90 LTVAENIATVPKLLGWD----------------------------------KERIKKRADELLDLVGLDPS---EYADRY 132 (309)
T ss_pred ccHHHHHHhhhhhcCCC----------------------------------HHHHHHHHHHHHHHhCCCHH---HHhhcC
Confidence 99999999877666532 12334578999999999752 123577
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000523 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1445)
Q Consensus 321 ~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1445)
+..|||||+|||.+||||+.+|++++||||+++||+-++.++.+-++++-+. -+++||.++|+.+|++.++|||.+|++
T Consensus 133 P~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~-l~kTivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 133 PHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKE-LGKTIVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred chhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHH-hCCEEEEEecCHHHHHhhhceEEEecC
Confidence 7889999999999999999999999999999999999999999998887554 455666689999999999999999999
Q ss_pred CeEEEecChhHHHH
Q 000523 401 GQIVYQGPRELVLE 414 (1445)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1445)
|+++..+++++++.
T Consensus 212 G~i~Q~~~P~~il~ 225 (309)
T COG1125 212 GEIVQYDTPDEILA 225 (309)
T ss_pred CeEEEeCCHHHHHh
Confidence 99999999999875
No 51
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.8e-42 Score=411.71 Aligned_cols=255 Identities=22% Similarity=0.379 Sum_probs=209.4
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCC---CcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDL---PKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNY 154 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 154 (1445)
..+..-..+|+++.+|..|. +. .-|... .+.+|+|+||+|.|..
T Consensus 431 lmkgvGAs~rvFel~dr~P~-----i~----~~G~~~p~~~~G~IeF~~VsFaYP~------------------------ 477 (716)
T KOG0058|consen 431 LMKGVGASERVFELMDRKPR-----IP----LTGTLAPDHLQGVIEFEDVSFAYPT------------------------ 477 (716)
T ss_pred HHHhcchHHHHHHHhccCCC-----CC----CCCccccccccceEEEEEeeeecCC------------------------
Confidence 45566677899998887775 32 224433 4678999999999843
Q ss_pred hhhcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEE
Q 000523 155 LRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYI 231 (1445)
Q Consensus 155 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv 231 (1445)
+++.+||+|+|++|+|||.|||||||||||||+.++|..+++|+ +|+|++||+|++++++ ++.+|+|
T Consensus 478 -------Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V 547 (716)
T KOG0058|consen 478 -------RPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLV 547 (716)
T ss_pred -------CCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeee
Confidence 23456999999999999999999999999999999999999999 9999999999998876 4889999
Q ss_pred cCCCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccc
Q 000523 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1445)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1445)
.|+|.+|. .||+|||.|+.. ....+.+.++++...+++ -+.+++++
T Consensus 548 ~QEPvLFs-~sI~eNI~YG~~----~~t~e~i~~AAk~ANah~-----------------------------FI~~~p~g 593 (716)
T KOG0058|consen 548 GQEPVLFS-GSIRENIAYGLD----NATDEEIEAAAKMANAHE-----------------------------FITNFPDG 593 (716)
T ss_pred eccceeec-ccHHHHHhcCCC----CCCHHHHHHHHHHhChHH-----------------------------HHHhCccc
Confidence 99998776 599999999864 122333333333322211 15679999
Q ss_pred ccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhh
Q 000523 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1445)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1445)
+||.||+++. .||||||||++|||||+++|+||||||.||+||+.++..+.+.|.+..+ ++|+++ |.| +-++.+.
T Consensus 594 Y~T~VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlv-IAH-RLSTV~~ 668 (716)
T KOG0058|consen 594 YNTVVGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLV-IAH-RLSTVRH 668 (716)
T ss_pred cccccCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEE-Eeh-hhhHhhh
Confidence 9999999887 5999999999999999999999999999999999999999999988653 344444 444 5688899
Q ss_pred cCeEEEecCCeEEEecChhHHHH
Q 000523 392 FDDIILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~ 414 (1445)
+|+|+++++|++++.|+++|+++
T Consensus 669 Ad~Ivvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 669 ADQIVVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred ccEEEEEcCCeEEecccHHHHhh
Confidence 99999999999999999999975
No 52
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=3.3e-41 Score=372.34 Aligned_cols=210 Identities=34% Similarity=0.468 Sum_probs=180.8
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCcc---ceEEEEcCCCCCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDNHIGEM 241 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~l 241 (1445)
+++|+|+|+++++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.++..+ +.+|||||.....+.+
T Consensus 15 ~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~~ 91 (258)
T COG1120 15 KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFGL 91 (258)
T ss_pred eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCCc
Confidence 35999999999999999999999999999999999999998 99999999999877653 7899999998888999
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+|-+.++..-.. +. .. ...++....++..|+.+|+.+.++..+.
T Consensus 92 tV~d~V~~GR~p~~-~~-----------------~~------------~~~~~D~~~v~~aL~~~~~~~la~r~~~---- 137 (258)
T COG1120 92 TVYELVLLGRYPHL-GL-----------------FG------------RPSKEDEEIVEEALELLGLEHLADRPVD---- 137 (258)
T ss_pred EEeehHhhcCCccc-cc-----------------cc------------CCCHhHHHHHHHHHHHhCcHHHhcCccc----
Confidence 99999998853210 00 00 0111223367888999999998886654
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
.|||||||||.|||||+++|++|+||||||+||...+.++++.++++.+.. +.+||.+.|+...+.++||++++|++|
T Consensus 138 -~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~-~~tvv~vlHDlN~A~ryad~~i~lk~G 215 (258)
T COG1120 138 -ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREK-GLTVVMVLHDLNLAARYADHLILLKDG 215 (258)
T ss_pred -ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 599999999999999999999999999999999999999999999998644 555566788999999999999999999
Q ss_pred eEEEecChhHHH
Q 000523 402 QIVYQGPRELVL 413 (1445)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1445)
+++.+|++++++
T Consensus 216 ~i~a~G~p~evl 227 (258)
T COG1120 216 KIVAQGTPEEVL 227 (258)
T ss_pred eEEeecCcchhc
Confidence 999999998875
No 53
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-41 Score=367.02 Aligned_cols=218 Identities=23% Similarity=0.332 Sum_probs=190.9
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+++++++..+... ..+...+|+|||++|++||++||+|.||||||||++++.+... +.+|+|.++|.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecc
Confidence 4567776444311 1123579999999999999999999999999999999999876 56999999997654
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000523 927 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1000 (1445)
Q Consensus 927 ~------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1445)
. ...|+.+|+++|+..++...||+||+.|...+.. .++++++++|.++++.+||.+..+.. +.+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcC
Confidence 3 2467889999999999999999999999987764 56788899999999999999888876 46899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEE
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1079 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~ 1079 (1445)
|||||||+|||||+.+|+||++|||||.|||.+...|.+.|+++.++ |.||+++||+++. +.+.|||+.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~V-vk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEV-VKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999764 9999999999974 8889999999985 8999
Q ss_pred EEcCC
Q 000523 1080 YVGPL 1084 (1445)
Q Consensus 1080 y~G~~ 1084 (1445)
..|+.
T Consensus 222 E~G~v 226 (339)
T COG1135 222 EEGTV 226 (339)
T ss_pred EeccH
Confidence 99986
No 54
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=365.22 Aligned_cols=217 Identities=26% Similarity=0.428 Sum_probs=185.9
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|+++.++ .+ .+|+|||++|++|++++|+||||||||||+|+|.|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~------------~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG------------NR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC------------CE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 578999999885 22 59999999999999999999999999999999999776 4689999999886
Q ss_pred CcccccceEEEeccCCCC--CCCCCHHHHHHHHHHhcCC--CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 926 KQETFARISGYCEQNDIH--SPFVTIYESLLFSAWLRLS--PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 926 ~~~~~~~~~gyv~Q~d~~--~~~lTv~E~l~f~~~lr~~--~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
.+..-+..+|||||...+ ..-+||+|-+..+..-+.. .... ++.++.++++|+.+|+.+++|..+| .|||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~-~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSG 142 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLN-KKDKEKVDEALERVGMEDLRDRQIG-----ELSG 142 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCccccccccccc-HHHHHHHHHHHHHcCchhhhCCccc-----ccCc
Confidence 654435679999996422 2348999999887443321 1122 3346779999999999999999865 6999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
||+|||.|||||+++|++|+|||||+|+|+.++..++++|+++.++|+||++++||++ .+.+.||+++.|+ +++++.
T Consensus 143 GQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~ 219 (254)
T COG1121 143 GQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIAS 219 (254)
T ss_pred HHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEec
Confidence 9999999999999999999999999999999999999999999988999999999998 5899999999997 589999
Q ss_pred cCCCC
Q 000523 1082 GPLGR 1086 (1445)
Q Consensus 1082 G~~~~ 1086 (1445)
||+.+
T Consensus 220 G~~~~ 224 (254)
T COG1121 220 GPPEE 224 (254)
T ss_pred cChhh
Confidence 99854
No 55
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-40 Score=353.96 Aligned_cols=231 Identities=26% Similarity=0.376 Sum_probs=198.6
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+++++++.+. +.+.+|+|||++|++||+++||||||+||||||+.|.|..+ +.+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~--P~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLR--PDKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCC--CCCCeEEEcCcch
Confidence 47788887665 45789999999999999999999999999999999999887 5689999999886
Q ss_pred Cc------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCc
Q 000523 926 KQ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSG 998 (1445)
Q Consensus 926 ~~------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~ 998 (1445)
.+ ...++.+|+++|+-.+|..+||+||+.|.. |...+.+++..++.+..-++.+||... .+.. +++
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 53 135678999999999999999999999864 333456677778888888999999876 5544 578
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 999 LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
||||+|||++||||++.+|+|||+||||+||||.++..+-++|+++.++ |.|++++|||.+ +++..+|++++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999875 999999999987 59999999999996 89
Q ss_pred EEEEcCCCC----chhhHHHHHHhCCC
Q 000523 1078 EIYVGPLGR----HSCHLISYFEAIPG 1100 (1445)
Q Consensus 1078 ~~y~G~~~~----~~~~~~~yF~~~~g 1100 (1445)
+++.|+..+ .---+.+||....+
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~~ 250 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIRD 250 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCCC
Confidence 999999742 11236778877643
No 56
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=4.5e-36 Score=406.22 Aligned_cols=216 Identities=22% Similarity=0.358 Sum_probs=186.9
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCcc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 924 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1445)
..++++|++..++. +++.+|+|+|+.+++||+++|+|+||||||||+++|+|... +.+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 46888998877631 23569999999999999999999999999999999999876 458999999988
Q ss_pred CCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000523 925 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 925 ~~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1445)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++. ...++.++.++++++.++|.+..+..+ +.||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 643 2345679999999999999999999999876653 223344566899999999998887764 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
|||||+||+||+.+|+||+|||||+|||+.++..+++.|+++. +|+|||++||+++ ++...+||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 5999999999986 57788999999986 7999999
Q ss_pred CC
Q 000523 1083 PL 1084 (1445)
Q Consensus 1083 ~~ 1084 (1445)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 85
No 57
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-40 Score=381.55 Aligned_cols=217 Identities=30% Similarity=0.440 Sum_probs=193.3
Q ss_pred eeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCcc-ceEEEEcCCCCCCCCCCHHH
Q 000523 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ-RTAAYISQHDNHIGEMTVRE 245 (1445)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lTV~E 245 (1445)
+|+|+|++|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..|+ |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999999 99999999999998875 88999999999999999999
Q ss_pred HHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCC
Q 000523 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1445)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1445)
|+.|+.+.++.. .++.+.+++++.+.|+|++..|.. +++||
T Consensus 95 Niaf~Lk~~~~~----------------------------------k~ei~~rV~eva~~L~l~~lL~r~-----P~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVP----------------------------------KAEIDKRVKEVAKLLGLEHLLNRK-----PLQLS 135 (338)
T ss_pred HhhhhhhhCCCc----------------------------------hHHHHHHHHHHHHHcCChhHHhcC-----cccCC
Confidence 999999876531 122345688899999999888754 55799
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEE
Q 000523 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1445)
Q Consensus 326 GGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1445)
|||||||++||||+.+|++++||||+|.||...+..+..-|+++.+ .-++++|.++|+..|+..++|||.+|++|+|..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~-~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHE-RLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHH-hcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999999999999988644 455666678999999999999999999999999
Q ss_pred ecChhHHHHHHHhcCCCCCCCCChhHHHH
Q 000523 406 QGPRELVLEFFASMGFRCPKRKGVADFLQ 434 (1445)
Q Consensus 406 ~G~~~~~~~~f~~lG~~cp~~~~~adfl~ 434 (1445)
.|++.++. ..|...-+|+|+-
T Consensus 215 ~g~p~ely--------~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLELY--------ERPANLFVAGFIG 235 (338)
T ss_pred cCChHHHh--------hCccchhhhhhcC
Confidence 99999984 4577777777754
No 58
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.2e-40 Score=367.99 Aligned_cols=218 Identities=27% Similarity=0.402 Sum_probs=189.0
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++.+|+++.++ ++.+|+|+|+++++||+++|+||||||||||||+|+|..+ +.+|+|.++|.++
T Consensus 2 ~L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i 66 (258)
T COG1120 2 MLEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDI 66 (258)
T ss_pred eeEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCch
Confidence 367889988874 4679999999999999999999999999999999999776 4589999999886
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 926 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSP-EVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 926 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
.. +.+++.++|+||.......+||+|.+.++..-.... ....++.++.++++++.+++.+++++.+ ..|||
T Consensus 67 ~~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSG 141 (258)
T COG1120 67 ASLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSG 141 (258)
T ss_pred hhcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccCh
Confidence 54 457889999999998888999999999875432211 1122334457899999999999999874 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
|||||+.|||||+++|+||+||||||+||...+.+++++++++++ +|+|||+++||++. ...++|++++|++ |+++.
T Consensus 142 GerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a 219 (258)
T COG1120 142 GERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVA 219 (258)
T ss_pred hHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEe
Confidence 999999999999999999999999999999999999999999984 59999999999985 7789999999985 89999
Q ss_pred EcCCC
Q 000523 1081 VGPLG 1085 (1445)
Q Consensus 1081 ~G~~~ 1085 (1445)
.|++.
T Consensus 220 ~G~p~ 224 (258)
T COG1120 220 QGTPE 224 (258)
T ss_pred ecCcc
Confidence 99974
No 59
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=382.99 Aligned_cols=223 Identities=30% Similarity=0.436 Sum_probs=196.8
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCH
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTV 243 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1445)
..+|+|+|++|++||+++|+|||||||||||++|||+..|+ +|+|.++|++++...+ +|.+++|+|+..+||+|||
T Consensus 18 ~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHltV 94 (352)
T COG3842 18 FTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMTV 94 (352)
T ss_pred eeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCcH
Confidence 45999999999999999999999999999999999999999 9999999999998877 4789999999999999999
Q ss_pred HHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccccc
Q 000523 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1445)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1445)
+||+.|+.+.++... ..+.+.+++++|+.++|++.++ +.+..
T Consensus 95 ~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~~~~-----R~p~q 136 (352)
T COG3842 95 EENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEGFAD-----RKPHQ 136 (352)
T ss_pred HHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchhhhh-----hChhh
Confidence 999999987432110 1123457888999999998766 44557
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000523 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1445)
Q Consensus 324 LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1445)
|||||||||+|||||+.+|++|+||||.|+||..-+.++..-|+++.+.. +.+.|.++|+..|+..++|||.+|++|+|
T Consensus 137 LSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~I 215 (352)
T COG3842 137 LSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGRI 215 (352)
T ss_pred hChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCce
Confidence 99999999999999999999999999999999999999999999887655 56666689999999999999999999999
Q ss_pred EEecChhHHHHHHHhcCCCCCCCCChhHHHHhhc
Q 000523 404 VYQGPRELVLEFFASMGFRCPKRKGVADFLQEVT 437 (1445)
Q Consensus 404 v~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev~ 437 (1445)
...|+++++ |..|...-+|+|+.+..
T Consensus 216 ~Q~gtP~ei--------Y~~P~~~fVA~FiG~~N 241 (352)
T COG3842 216 EQVGTPEEI--------YERPATRFVADFIGESN 241 (352)
T ss_pred eecCCHHHH--------hhCcchHHHHHHhCcce
Confidence 999999998 45788888899987543
No 60
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-40 Score=357.21 Aligned_cols=204 Identities=25% Similarity=0.371 Sum_probs=180.3
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++++++++. ...+|+|||++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCccc
Confidence 356777777663 2579999999999999999999999999999999999887 5689999999887
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000523 926 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1005 (1445)
Q Consensus 926 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1445)
.. ....+|||+|++.++|.+||+||+.++...+. .++++++++++++++.+||.+..+.. +..|||||||
T Consensus 68 ~~--p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQ 137 (248)
T COG1116 68 TG--PGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQ 137 (248)
T ss_pred CC--CCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHH
Confidence 32 34568999999999999999999999877654 34556667899999999999999887 5689999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecC
Q 000523 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1445)
Q Consensus 1006 Rl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~g 1075 (1445)
||+|||||+.+|+||+||||++.||+.|+..+++.|.++.+ .++|||++|||.+ |...+.|||++|.++
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999865 5899999999997 677889999999864
No 61
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-40 Score=355.16 Aligned_cols=194 Identities=27% Similarity=0.404 Sum_probs=170.7
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHH
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
..+|+|+|++|++||+++|+||||||||||||+|+|+.+|+ +|+|.++|.++ ..+...++||+|++.++|.+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v--~~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPV--TGPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCccc--CCCCCCEEEEeccCcccchhhHH
Confidence 45999999999999999999999999999999999999999 99999999987 34567899999999999999999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.|+...++... .+...+++++|+..||.+..|. .+..|
T Consensus 91 ~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~~-----~P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFEDK-----YPHQL 131 (248)
T ss_pred hhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhhc-----Ccccc
Confidence 99999987654211 1122357888999999988774 55679
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecC--Ce
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD--GQ 402 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~--G~ 402 (1445)
||||||||+|||||+.+|++|+||||+++||.-|+.++.+.|.++.+.. +.+|+.++|+-+|+..++|||++|++ |+
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~-~~TvllVTHdi~EAv~LsdRivvl~~~P~~ 210 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEET-RKTVLLVTHDVDEAVYLADRVVVLSNRPGR 210 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhh-CCEEEEEeCCHHHHHhhhCEEEEecCCCcc
Confidence 9999999999999999999999999999999999999999998888754 55666689999999999999999998 44
Q ss_pred E
Q 000523 403 I 403 (1445)
Q Consensus 403 i 403 (1445)
|
T Consensus 211 i 211 (248)
T COG1116 211 I 211 (248)
T ss_pred e
Confidence 4
No 62
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.1e-40 Score=348.22 Aligned_cols=209 Identities=26% Similarity=0.385 Sum_probs=179.3
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1445)
+.||+|||++|++||+++|+|||||||||||++|.|+++|+ +|+|.++|+++.+... ++++|+++|+-.+|
T Consensus 21 ~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gALF 97 (263)
T COG1127 21 RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGALF 97 (263)
T ss_pred EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccccc
Confidence 45999999999999999999999999999999999999999 9999999999876543 46799999999999
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
..+||+||+.|..+-... +|+ ...+..+..-|+..||+.. +.+
T Consensus 98 ssltV~eNVafplre~~~-------------------lp~--------------~~i~~lv~~KL~~VGL~~~----~~~ 140 (263)
T COG1127 98 SSLTVFENVAFPLREHTK-------------------LPE--------------SLIRELVLMKLELVGLRGA----AAD 140 (263)
T ss_pred cccchhHhhheehHhhcc-------------------CCH--------------HHHHHHHHHHHHhcCCChh----hhh
Confidence 999999999997643210 111 1122345556788899754 345
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
.++..||||+|||+++|||++.+|+++|+||||+||||.++..+.+.++++.... +.++++++|+.++++..+|++++|
T Consensus 141 ~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~l-g~T~i~VTHDl~s~~~i~Drv~~L 219 (263)
T COG1127 141 LYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDAL-GLTVIMVTHDLDSLLTIADRVAVL 219 (263)
T ss_pred hCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhh-CCEEEEEECChHHHHhhhceEEEE
Confidence 6777899999999999999999999999999999999999999999999887654 555666899999999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000523 399 SDGQIVYQGPRELVLE 414 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1445)
.+|+|+..|+++++.+
T Consensus 220 ~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 220 ADGKVIAEGTPEELLA 235 (263)
T ss_pred eCCEEEEeCCHHHHHh
Confidence 9999999999999864
No 63
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.2e-40 Score=350.70 Aligned_cols=213 Identities=26% Similarity=0.366 Sum_probs=189.4
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++|+|++..+. ++.+++|+|++|++||+++++|||||||||+|++|.+..+ +.+|+|.|||.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecc
Confidence 46777776553 4579999999999999999999999999999999999887 56999999999875
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCcCCH
Q 000523 927 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP--LRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 927 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~LSg 1001 (1445)
. ..+||.+|||-|.-.+||++||.||+.+--.+. ..++++.+++++|+|+.+||.+ +.+.. +..|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 4 457899999999999999999999998866554 4677888899999999999975 66665 578999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
||+|||.+||||+++|+||+||||++.|||-++..+++-++++.++ |+|||++|||.+ +.+.+.||+.+|+ +|+++-
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~-~G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMD-AGEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEec-CCeEEE
Confidence 9999999999999999999999999999999999999999998764 999999999987 6889999999998 578888
Q ss_pred EcCC
Q 000523 1081 VGPL 1084 (1445)
Q Consensus 1081 ~G~~ 1084 (1445)
+|++
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 8875
No 64
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9.4e-40 Score=354.03 Aligned_cols=193 Identities=28% Similarity=0.440 Sum_probs=168.1
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc------ccc-cceEEEeccCCCCC
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ------ETF-ARISGYCEQNDIHS 944 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~-~~~~gyv~Q~d~~~ 944 (1445)
..+|++||++|++||+++|||||||||||||++|.|...+ .+|.|.++|.+... ..+ ++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999998764 68999999976542 123 45699999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc-ccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000523 945 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQ-SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1023 (1445)
Q Consensus 945 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLD 1023 (1445)
|.+||+||+.+...+.... ...+++.++++++.+||.+..+ .. +..|||||||||+|||||+.+|+||+.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~~---~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGKS---AGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCCC---hhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 9999999999877665432 2245667889999999987665 44 4679999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 1024 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 1024 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
|||.+||+.++..|++.+++++++ |+|||++|||| ++...+||++.|++|+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 999999999999999999999865 89999999998 4788999999999753
No 65
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-40 Score=348.99 Aligned_cols=220 Identities=26% Similarity=0.334 Sum_probs=185.9
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|++-.++ +++++|+|||+.|++||++||+|+|||||||||++|.|... +..|+|.++|.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 467888876653 35689999999999999999999999999999999999765 5689999999764
Q ss_pred Cc------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000523 926 KQ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-----PEVDSETRKMFIDEVMELVELNPLRQSLVGLP 994 (1445)
Q Consensus 926 ~~------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 994 (1445)
.. ..+++.+||++|+..+.+.+||.||++.+..-+.+ -....++.+..+-++++.+|+.+.+-...
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 32 34678899999999999999999999876422211 11223344555678999999998877764
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
..|||||+|||+|||+|+.+|+||+.|||+++|||.++..||+.|+++++ .|.|||++.||.+. ..++|||++-|+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 46999999999999999999999999999999999999999999999985 59999999999875 678999999998
Q ss_pred cCcEEEEEcCCCC
Q 000523 1074 RGGQEIYVGPLGR 1086 (1445)
Q Consensus 1074 ~gG~~~y~G~~~~ 1086 (1445)
. |+++|.||..+
T Consensus 223 ~-G~ivfDg~~~e 234 (258)
T COG3638 223 A-GRIVFDGPASE 234 (258)
T ss_pred C-CcEEEeCChhh
Confidence 5 89999999854
No 66
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-40 Score=359.66 Aligned_cols=224 Identities=30% Similarity=0.461 Sum_probs=189.3
Q ss_pred cceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCc---cCCCcCc-cceEEEEcCCCCCCC
Q 000523 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGH---DMDEFVP-QRTAAYISQHDNHIG 239 (1445)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~---~~~~~~~-~~~~~yv~Q~d~~~~ 239 (1445)
...+++|||+.|+.||+++++|||||||||||++|||+..|+ +|+|.+||. |.+.... .|.+|||+|+..+|+
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 445899999999999999999999999999999999999999 999999999 6666433 488999999999999
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
+|||.+||.|+.+++.. .|+ ..+.+.+++++|+...|++.++ +
T Consensus 91 HmtVa~NIAFGl~~~~~-------------------~p~-------------~~~~r~rv~elL~lvqL~~la~-----r 133 (345)
T COG1118 91 HMTVADNIAFGLKVRKE-------------------RPS-------------EAEIRARVEELLRLVQLEGLAD-----R 133 (345)
T ss_pred cchHHhhhhhccccccc-------------------CCC-------------hhhHHHHHHHHHHHhcccchhh-----c
Confidence 99999999999876521 011 1123456788899999987655 6
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
++.+|||||||||++||||+..|++|+||||+++||...+..+.+.|+++.... +.+.+.++|+..|++++||+|++|+
T Consensus 134 yP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~-~~ttvfVTHD~eea~~ladrvvvl~ 212 (345)
T COG1118 134 YPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRL-GVTTVFVTHDQEEALELADRVVVLN 212 (345)
T ss_pred CchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhh-CceEEEEeCCHHHHHhhcceEEEec
Confidence 677899999999999999999999999999999999999999999999875533 5555568999999999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhh
Q 000523 400 DGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEV 436 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev 436 (1445)
+|+|...||++++. ..|...-+..|+-++
T Consensus 213 ~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~~ 241 (345)
T COG1118 213 QGRIEQVGPPDEVY--------DHPASRFVARFLGEV 241 (345)
T ss_pred CCeeeeeCCHHHHh--------cCCCccceecccccc
Confidence 99999999999984 345555555555443
No 67
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9.8e-40 Score=377.31 Aligned_cols=212 Identities=34% Similarity=0.497 Sum_probs=184.7
Q ss_pred cceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc--CccceEEEEcCCCCCCCCC
Q 000523 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF--VPQRTAAYISQHDNHIGEM 241 (1445)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 241 (1445)
.+.+|+|||+++++|++++|+||||||||||||+|+|++.|+ +|+|.++|++.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 357999999999999999999999999999999999999998 99999999987652 3357899999999999999
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+|||.|.+++.+... .....+++++++.+||++..+ +.+
T Consensus 94 T~~e~l~~~~~l~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~-----~~~ 134 (293)
T COG1131 94 TVRENLEFFARLYGLSK----------------------------------EEAEERIEELLELFGLEDKAN-----KKV 134 (293)
T ss_pred cHHHHHHHHHHHhCCCh----------------------------------hHHHHHHHHHHHHcCCchhhC-----cch
Confidence 99999999998875321 011235788999999998444 445
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
++||+||||||+||.||+++|++|||||||+|||+.++.++.+.|++++. .++++|+..+|...++..+||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~-~g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAK-EGGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHh-CCCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 57999999999999999999999999999999999999999999999876 34456666788899999999999999999
Q ss_pred eEEEecChhHHHHHHHh
Q 000523 402 QIVYQGPRELVLEFFAS 418 (1445)
Q Consensus 402 ~iv~~G~~~~~~~~f~~ 418 (1445)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999998776543
No 68
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-39 Score=355.81 Aligned_cols=208 Identities=27% Similarity=0.443 Sum_probs=176.5
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCC--CCCCCCCH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHD--NHIGEMTV 243 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d--~~~~~lTV 243 (1445)
++|+|||+++++|++++|+||||||||||+|+|+|+++|. +|+|.++|.+..+...+..+|||||.. .+-+.+||
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP~tV 94 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFPITV 94 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCCcCH
Confidence 3999999999999999999999999999999999999998 999999999887776677999999953 34445799
Q ss_pred HHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccccc
Q 000523 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1445)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1445)
+|.+..+..-+. + ..... ..+.+..++++|+.+|+.+.+|..+|+
T Consensus 95 ~d~V~~g~~~~~-g----~~~~~-------------------------~~~d~~~v~~aL~~Vgm~~~~~r~i~~----- 139 (254)
T COG1121 95 KDVVLLGRYGKK-G----WFRRL-------------------------NKKDKEKVDEALERVGMEDLRDRQIGE----- 139 (254)
T ss_pred HHHHHccCcccc-c----ccccc-------------------------cHHHHHHHHHHHHHcCchhhhCCcccc-----
Confidence 999998742211 0 01100 111235688999999999999988875
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000523 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1445)
Q Consensus 324 LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1445)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|++.|+++.+. +.+|++++|+...+.+.||+|+.|++ ++
T Consensus 140 LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln~-~~ 216 (254)
T COG1121 140 LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLNR-HL 216 (254)
T ss_pred cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEcC-ee
Confidence 9999999999999999999999999999999999999999999998753 56666689999999999999999965 78
Q ss_pred EEecChhHHHH
Q 000523 404 VYQGPRELVLE 414 (1445)
Q Consensus 404 v~~G~~~~~~~ 414 (1445)
++.|+++++.+
T Consensus 217 ~~~G~~~~~~~ 227 (254)
T COG1121 217 IASGPPEEVLT 227 (254)
T ss_pred EeccChhhccC
Confidence 89999988753
No 69
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=6.1e-40 Score=412.96 Aligned_cols=258 Identities=27% Similarity=0.365 Sum_probs=209.3
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.|+.+...+|+.++++.++|.=..+. ....+....+++|+|+++.+...
T Consensus 436 ~q~~~~~~~rL~dil~~~~E~~~~~~-----~~~~~~~~g~I~~~nvsf~y~~~-------------------------- 484 (709)
T COG2274 436 FQQAKVALERLGDILDTPPEQEGDKT-----LIHLPKLQGEIEFENVSFRYGPD-------------------------- 484 (709)
T ss_pred HHHHHHHHHHHHHHhcCCcccccccc-----cccccccCceEEEEEEEEEeCCC--------------------------
Confidence 78999999999999999888211110 12334446789999999998531
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1445)
...+|+|+|++|+|||.++|+|+||||||||+|+|+|+++|+ +|+|.+||+|+++.++ ++.++||+|+
T Consensus 485 ------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~ 555 (709)
T COG2274 485 ------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQD 555 (709)
T ss_pred ------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEccc
Confidence 114999999999999999999999999999999999999999 9999999999887765 5899999997
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
+ ++++.||+||+.++. +....+.+.++++....+ -.+..++.++||
T Consensus 556 ~-~Lf~gSI~eNi~l~~----p~~~~e~i~~A~~~ag~~-----------------------------~fI~~lP~gy~t 601 (709)
T COG2274 556 P-FLFSGSIRENIALGN----PEATDEEIIEAAQLAGAH-----------------------------EFIENLPMGYDT 601 (709)
T ss_pred c-hhhcCcHHHHHhcCC----CCCCHHHHHHHHHHhCcH-----------------------------HHHHhccccccc
Confidence 6 556679999999864 222233333333322111 124578999999
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.||+.+. +||||||||++|||||+++|+||+||||||+||+.++..|.+.|++.. .++|+|+.. | +..+.+.||+
T Consensus 602 ~v~E~G~-~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~~T~I~Ia-H-Rl~ti~~adr 676 (709)
T COG2274 602 PVGEGGA-NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QGRTVIIIA-H-RLSTIRSADR 676 (709)
T ss_pred ccccCCC-CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cCCeEEEEE-c-cchHhhhccE
Confidence 9997665 799999999999999999999999999999999999999999999864 345655544 3 4578899999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|+|+.+|+++++++
T Consensus 677 IiVl~~Gkiv~~gs~~ell~ 696 (709)
T COG2274 677 IIVLDQGKIVEQGSHEELLA 696 (709)
T ss_pred EEEccCCceeccCCHHHHHH
Confidence 99999999999999999986
No 70
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-39 Score=355.28 Aligned_cols=205 Identities=29% Similarity=0.448 Sum_probs=185.2
Q ss_pred ceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCc---cCCc-ccccceEEEeccCCCCCCC
Q 000523 871 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY---PKKQ-ETFARISGYCEQNDIHSPF 946 (1445)
Q Consensus 871 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~Q~d~~~~~ 946 (1445)
...+++|||+.|+.||++||+|||||||||||++|||..+ +..|.|.+||. +.++ ....|.+|||+|+-.+|++
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~H 91 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPH 91 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechhhccc
Confidence 4568999999999999999999999999999999999987 56899999998 5444 3346889999999999999
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000523 947 VTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1026 (1445)
Q Consensus 947 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPT 1026 (1445)
+||.+|+.|+..++ ...++..+++.+++++|+.++|+++.+.. +..|||||||||++||||+.+|++|+||||.
T Consensus 92 mtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 92 MTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred chHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 99999999998877 33455667788899999999999999887 5689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCC
Q 000523 1027 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1085 (1445)
Q Consensus 1027 sgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~ 1085 (1445)
++||+.-+..+.+.|+++.+. |.|+|++|||+. ++++.+|||++|++ |++.-.||..
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 999999999999999999865 999999999986 79999999999986 7999889873
No 71
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.3e-40 Score=336.35 Aligned_cols=200 Identities=28% Similarity=0.369 Sum_probs=183.5
Q ss_pred EEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc--ccccceEEEeccCCCCCCCCCHH
Q 000523 873 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVTIY 950 (1445)
Q Consensus 873 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv~ 950 (1445)
++++||||+++.||++||+|+|||||||+|++|++... +.+|.|.+||.+... ...++.+|.++.+--++..+|++
T Consensus 16 ~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~--P~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~r 93 (245)
T COG4555 16 QAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLI--PDSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTAR 93 (245)
T ss_pred hhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhcc--CCCceEEEeecccccChHHHhhhcceecCCcChhhhhhHH
Confidence 58999999999999999999999999999999999887 568999999998643 45678899999888889999999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000523 951 ESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1030 (1445)
Q Consensus 951 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD 1030 (1445)
|||.|.+.+.. ....+.+++++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|++++|||||||||
T Consensus 94 Enl~~Fa~L~~---l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLD 165 (245)
T COG4555 94 ENLKYFARLNG---LSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLD 165 (245)
T ss_pred HHHHHHHHHhh---hhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCcc
Confidence 99999988863 4556678889999999999999999975 699999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1031 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1031 ~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
..+...+.+.++++.+.|++||+++|.++ ++.++||++++|++ |++++.|..
T Consensus 166 i~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~ 217 (245)
T COG4555 166 IRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSI 217 (245)
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCH
Confidence 99999999999999888999999999986 78889999999996 799999986
No 72
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-39 Score=337.34 Aligned_cols=220 Identities=25% Similarity=0.389 Sum_probs=178.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC--CCCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
.+|+|||+.|+++++||++|||||||||||++|....+. ..+++|+|.++|+++-+. ..|+.+|.|+|.+..|
T Consensus 21 ~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPnPF 100 (253)
T COG1117 21 HALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPNPF 100 (253)
T ss_pred hhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCCCC
Confidence 499999999999999999999999999999999988654 457899999999997543 2368999999999999
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcc-ccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTMVG 317 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vg 317 (1445)
| +|++||+.|+.|++|... +.+ +.+++..|+.-+|-+ ..|.+ .
T Consensus 101 p-~SIydNVayG~r~~g~~~--~~l--------------------------------deiVe~sLk~AaLWdEVKDrL-~ 144 (253)
T COG1117 101 P-MSIYDNVAYGLRLHGIKD--KEL--------------------------------DEIVESSLKKAALWDEVKDRL-H 144 (253)
T ss_pred C-chHHHHHHHhHHhhccch--HHH--------------------------------HHHHHHHHHHhHhHHHhHHHh-h
Confidence 9 999999999999887532 111 122333333333322 11211 1
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000523 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1445)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1445)
+...+|||||+||++|||+|+-+|+||+||||||+|||.++..|.+.+.++. ..-+|+.++|.+.++.+..|+..+
T Consensus 145 -~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk---~~yTIviVTHnmqQAaRvSD~taF 220 (253)
T COG1117 145 -KSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK---KKYTIVIVTHNMQQAARVSDYTAF 220 (253)
T ss_pred -CCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH---hccEEEEEeCCHHHHHHHhHhhhh
Confidence 2344699999999999999999999999999999999999999999999874 345566689999999999999999
Q ss_pred ecCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHH
Q 000523 398 LSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFL 433 (1445)
Q Consensus 398 L~~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl 433 (1445)
+..|++++.|+.+++ |..|..+...||+
T Consensus 221 f~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 221 FYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 999999999999987 3457766666665
No 73
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-39 Score=340.14 Aligned_cols=215 Identities=26% Similarity=0.383 Sum_probs=179.9
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1445)
.++|+|||+.|++||+++|+|||||||||||++|.|..+|+ +|+|.+||.++..... ++.+||++|+..+.
T Consensus 17 ~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nLv 93 (258)
T COG3638 17 HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNLV 93 (258)
T ss_pred ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCcc
Confidence 45999999999999999999999999999999999999998 9999999988765542 46899999999999
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+.+||.+|+..+..-.. .... .-.+..+ ++.+..+-+.|+.+|+.+.+.+..+
T Consensus 94 ~r~sv~~NVl~grl~~~--s~~~---------slfglfs---------------k~dk~~Al~aLervgi~~~A~qra~- 146 (258)
T COG3638 94 PRLSVLENVLLGRLGYT--STWR---------SLFGLFS---------------KEDKAQALDALERVGILDKAYQRAS- 146 (258)
T ss_pred cccHHHHHHHhhhcccc--hHHH---------HHhCCCC---------------HHHHHHHHHHHHHcCcHHHHHHHhc-
Confidence 99999999998753211 0100 1111111 1223455677999999988887665
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
.|||||+|||+|||+|+.+|++++-|||+++||+.++.++++.|++.....+.|+|+ .+|..+-+.++||||+-|
T Consensus 147 ----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~-nLH~vdlA~~Y~~Riigl 221 (258)
T COG3638 147 ----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIV-NLHQVDLAKKYADRIIGL 221 (258)
T ss_pred ----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEE-EechHHHHHHHHhhheEe
Confidence 499999999999999999999999999999999999999999999998766556555 556678899999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000523 399 SDGQIVYQGPRELVLE 414 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1445)
++|+|+|.||++++.+
T Consensus 222 ~~G~ivfDg~~~el~~ 237 (258)
T COG3638 222 KAGRIVFDGPASELTD 237 (258)
T ss_pred cCCcEEEeCChhhhhH
Confidence 9999999999988654
No 74
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-39 Score=333.00 Aligned_cols=206 Identities=32% Similarity=0.377 Sum_probs=182.9
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1445)
.++++||||.++.||+++|+|||||||||+|++|++++.|+ +|+|++||.+..+.. .++.+|.++.+-.++..||
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT 91 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLT 91 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhhh
Confidence 34899999999999999999999999999999999999999 999999999875432 3578999997778999999
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
++|||.|.+++.+.. ..+.+.+++++.+.|+|.+|.|+.+|+
T Consensus 92 ~rEnl~~Fa~L~~l~----------------------------------~~~~kari~~l~k~l~l~~~~~rRv~~---- 133 (245)
T COG4555 92 ARENLKYFARLNGLS----------------------------------RKEIKARIAELSKRLQLLEYLDRRVGE---- 133 (245)
T ss_pred HHHHHHHHHHHhhhh----------------------------------hhHHHHHHHHHHHHhChHHHHHHHHhh----
Confidence 999999998775431 122345678899999999999998885
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1445)
+|-|+||||+|||||+.+|++++|||||||||..+...+.+.++++. ..+.+|+..+|.++|+..+||+|++|++|+
T Consensus 134 -~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k--~egr~viFSSH~m~EvealCDrvivlh~Ge 210 (245)
T COG4555 134 -FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLK--NEGRAVIFSSHIMQEVEALCDRVIVLHKGE 210 (245)
T ss_pred -hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhh--cCCcEEEEecccHHHHHHhhheEEEEecCc
Confidence 99999999999999999999999999999999999999999999863 346667778999999999999999999999
Q ss_pred EEEecChhHHHH
Q 000523 403 IVYQGPRELVLE 414 (1445)
Q Consensus 403 iv~~G~~~~~~~ 414 (1445)
+++.|+.+.+.+
T Consensus 211 vv~~gs~~~l~~ 222 (245)
T COG4555 211 VVLEGSIEALDA 222 (245)
T ss_pred EEEcCCHHHHHH
Confidence 999999988754
No 75
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=7.8e-39 Score=326.87 Aligned_cols=213 Identities=25% Similarity=0.326 Sum_probs=183.3
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.|++|+..|. ..+++|+||||+|++||++-|+||||||||||||+|.+... +..|+|.++|+++.
T Consensus 2 I~f~~V~k~Y~------------~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYP------------GGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcC------------CCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 46777765554 23569999999999999999999999999999999999766 56899999999865
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000523 927 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1000 (1445)
Q Consensus 927 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1445)
.. -++|.+|.|+||..+.+..||+||+.|...... .+..+.+++|.++|+.+||.+..+.+ +..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 31 257899999999999999999999999876654 34566778899999999999988876 46899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHH-hhceEeEEecCcEEE
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFE-AFDELFLMKRGGQEI 1079 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~-~fD~v~~l~~gG~~~ 1079 (1445)
|||+|||+||||++.+|++|+.||||.+|||..+..||+++.++.+.|.|||+.||+.. +.+ .-.|++.|.+ |+++
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~--lv~~~~~rvl~l~~-Grl~ 216 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLE--LVNRMRHRVLALED-GRLV 216 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHH--HHHhccCcEEEEeC-CEEE
Confidence 99999999999999999999999999999999999999999999989999999999854 444 4467888875 7888
Q ss_pred EEcCC
Q 000523 1080 YVGPL 1084 (1445)
Q Consensus 1080 y~G~~ 1084 (1445)
.....
T Consensus 217 ~d~~~ 221 (223)
T COG2884 217 RDESR 221 (223)
T ss_pred ecccc
Confidence 76543
No 76
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.8e-39 Score=372.71 Aligned_cols=229 Identities=24% Similarity=0.362 Sum_probs=193.4
Q ss_pred cCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhhcCCccccceeeecceeEEeCCeEEEEEcCCCC
Q 000523 110 VGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSS 189 (1445)
Q Consensus 110 ~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~Gs 189 (1445)
..+..+.-+|+|+||++++.+ +++||+++||+|+.||.+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~~---------------------------------k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYGP---------------------------------KRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeCC---------------------------------CCceecceeEEecCCCEEEEECCCCC
Confidence 467778889999999999842 22499999999999999999999999
Q ss_pred CHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHH
Q 000523 190 GKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTEL 266 (1445)
Q Consensus 190 GKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 266 (1445)
||||+|++|.++++ . +|+|.+||.++++..+ |+.+|||||+ .++++.||.+||.++. +...++.+.++
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd-~~LFndTIl~NI~YGn----~sas~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQD-SVLFNDTILYNIKYGN----PSASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCc-ccccchhHHHHhhcCC----CCcCHHHHHHH
Confidence 99999999999998 5 9999999999887655 5789999995 5566679999999985 33455666666
Q ss_pred HHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccce
Q 000523 267 ARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALF 346 (1445)
Q Consensus 267 ~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vll 346 (1445)
|++...++ -+..|+++++|.||+++.. |||||||||++||+++.+|+|++
T Consensus 461 ~k~a~~hd-----------------------------~i~~l~~GY~T~VGerG~~-LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRAGLHD-----------------------------VISRLPDGYQTLVGERGLM-LSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHcCcHH-----------------------------HHHhccccchhhHhhcccc-cccchHHHHHHHHHHhcCCCeEE
Confidence 66543211 1456889999999998875 99999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecChhHHHH
Q 000523 347 MDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 347 LDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~~ 414 (1445)
+|||||+||+.|+.++++.+.+. ..++|+|+. .|. ..+..-||+|++|++|++.+.|++++++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~--~~~rTvI~I-vH~-l~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDV--MSGRTVIMI-VHR-LDLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHh--cCCCeEEEE-Eec-chhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999873 245666654 444 46778899999999999999999999976
No 77
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-38 Score=363.79 Aligned_cols=214 Identities=28% Similarity=0.399 Sum_probs=191.3
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|++..+. ...+|+|||++|+.||.++|+|||||||||||++|||... +.+|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 467777776653 1129999999999999999999999999999999999886 5689999999987
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000523 926 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 926 ~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1445)
+. ...+|.+++|+|+..++|++||+||+.|+.+++. .++++.+++|+++.+.|+|+++.|.. ++.||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhH
Confidence 65 3456889999999999999999999999987764 45677888999999999999999987 468999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
|||+|||||+++|++++||||.|+||+..+..+...|+++.++ |.|+|.+|||.. |.+.++||+.+|+ +|++.-.|.
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999998754 899999999974 7999999999998 589999988
Q ss_pred C
Q 000523 1084 L 1084 (1445)
Q Consensus 1084 ~ 1084 (1445)
+
T Consensus 218 p 218 (338)
T COG3839 218 P 218 (338)
T ss_pred h
Confidence 6
No 78
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5.6e-38 Score=366.28 Aligned_cols=214 Identities=27% Similarity=0.408 Sum_probs=186.9
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++|++..+. ++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEec
Confidence 578888887763 2469999999999999999999999999999999999876 4689999999886
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000523 926 KQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1003 (1445)
Q Consensus 926 ~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1445)
.. ...++.+|||+|++.+++.+||+|++.|.+.++. .+..+.+++++++++.++|.+..++.+ ++|||||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHH
Confidence 43 2346789999999999999999999998766542 233444556789999999988887764 5799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1004 rqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
|||++||+||+++|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999877999999999987 68889999999986 79999998
Q ss_pred C
Q 000523 1084 L 1084 (1445)
Q Consensus 1084 ~ 1084 (1445)
.
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 6
No 79
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-38 Score=330.48 Aligned_cols=217 Identities=23% Similarity=0.324 Sum_probs=187.4
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCC---CCCeEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~---~~~~~~G~i~i~g 922 (1445)
.++++|++..+. .+++|+|||+.|++++++||+|||||||||||++|.+.. ++-.++|+|.++|
T Consensus 7 ~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 577888887773 467999999999999999999999999999999998843 3446889999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 996 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 996 (1445)
.++.. ..+|+.+|.|+|.+.-|| +|++||+.|+.++....+ ++.++.|++.|+...|++ .+|.+..+ .
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL~~s--a 147 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRLHKS--A 147 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHhhCC--c
Confidence 87643 357889999999999999 999999999988765433 566788999999999975 44544333 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
.+|||||+|||||||+|+.+|+||+||||||+|||.+...|.+++.++. +.-|||++||.+. ......|+...+.. |
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G 224 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-G 224 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-c
Confidence 5799999999999999999999999999999999999999999999997 4689999999986 47788999999986 7
Q ss_pred EEEEEcCC
Q 000523 1077 QEIYVGPL 1084 (1445)
Q Consensus 1077 ~~~y~G~~ 1084 (1445)
+++.+|+.
T Consensus 225 ~LvE~g~T 232 (253)
T COG1117 225 ELVEFGPT 232 (253)
T ss_pred EEEEEcCH
Confidence 99999997
No 80
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-39 Score=366.97 Aligned_cols=257 Identities=20% Similarity=0.339 Sum_probs=216.2
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.|..-.-+|+.+++++|++| ++|.....++..++..|+|+||++.+++
T Consensus 502 iQ~nfiDmEnmfdllkee~e-----Vvd~P~a~pl~~~~G~i~fsnvtF~Y~p--------------------------- 549 (790)
T KOG0056|consen 502 IQKNFIDMENMFDLLKEEPE-----VVDLPGAPPLKVTQGKIEFSNVTFAYDP--------------------------- 549 (790)
T ss_pred HHHhhhhHHHHHHHhhcCch-----hhcCCCCCCccccCCeEEEEEeEEecCC---------------------------
Confidence 45666678999999999999 8888888888889999999999999853
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC---ccceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~ 234 (1445)
.+++|+||||++.||+.+|++||||+||||++++|.+..+.+ +|.|++||+|++... .++.||.||||
T Consensus 550 ------~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQD 620 (790)
T KOG0056|consen 550 ------GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQD 620 (790)
T ss_pred ------CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCc
Confidence 245999999999999999999999999999999999999988 999999999986543 46789999996
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
..+| +.|+..|+.|+. ++...+.+.++++... ---++++++++++|
T Consensus 621 tvLF-NdTI~yNIryak----~~AsneevyaAAkAA~-----------------------------IHdrIl~fPegY~t 666 (790)
T KOG0056|consen 621 TVLF-NDTILYNIRYAK----PSASNEEVYAAAKAAQ-----------------------------IHDRILQFPEGYNT 666 (790)
T ss_pred ceee-cceeeeheeecC----CCCChHHHHHHHHHhh-----------------------------HHHHHhcCchhhhh
Confidence 5554 569999999864 3333333333322211 11247899999999
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.||+++.+ |||||||||+|||++++.|.+++|||.||+||..++++|..+|.+++. ++|+|+.. |+.++.-.+|.
T Consensus 667 ~VGERGLk-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvA--HRLSTivnAD~ 741 (790)
T KOG0056|consen 667 RVGERGLK-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVA--HRLSTIVNADL 741 (790)
T ss_pred hhhhcccc-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEe--eeehheecccE
Confidence 99999997 999999999999999999999999999999999999999999999874 34544433 45667778999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|+++++|+|++.|.++|++.
T Consensus 742 ILvi~~G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 742 ILVISNGRIVERGRHEELLK 761 (790)
T ss_pred EEEEeCCeEeecCcHHHHHh
Confidence 99999999999999999875
No 81
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=7.6e-38 Score=367.78 Aligned_cols=206 Identities=25% Similarity=0.362 Sum_probs=177.4
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1445)
.++|+|||+++++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++....+ ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 45999999999999999999999999999999999999998 9999999999876532 45799999999999
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+.+||+||+.|+.+..+... .+...++.++++.+||.+..|..+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~~~~-- 138 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHDSYP-- 138 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998765432110 011234677899999988777554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
+.|||||||||+|||||+.+|++|+||||||+||+.++..+.+.|+++.+.. +.+|+.++|+...+.+.||+|++|
T Consensus 139 ---~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~-g~tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 139 ---SNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRL-GLTILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999986533 455566888999999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|++++.|+.+++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 82
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.6e-38 Score=341.70 Aligned_cols=196 Identities=30% Similarity=0.450 Sum_probs=166.4
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1445)
.++|++||++|++||+++|+|||||||||||++|.|+..|+ +|.|.++|.++..+.. ++.+|||+|+..+
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nL 94 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNL 94 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCC
Confidence 67999999999999999999999999999999999999998 9999999998876543 3579999999999
Q ss_pred CCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccc
Q 000523 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1445)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1445)
+|++||+||+.+...+.+.... .....++.+++.+||.+..+.
T Consensus 95 l~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~~--- 137 (226)
T COG1136 95 LPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLLK--- 137 (226)
T ss_pred CCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhcc---
Confidence 9999999999988766543211 112346778899999866551
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000523 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1445)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1445)
..+..|||||||||+|||||+.+|++++.||||.+||+.++..|++.++++.+.. +++|+.++|+ +++...|||++.
T Consensus 138 -~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~-g~tii~VTHd-~~lA~~~dr~i~ 214 (226)
T COG1136 138 -KKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKER-GKTIIMVTHD-PELAKYADRVIE 214 (226)
T ss_pred -CCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhc-CCEEEEEcCC-HHHHHhCCEEEE
Confidence 3345699999999999999999999999999999999999999999999987644 4444546665 577889999999
Q ss_pred ecCCeE
Q 000523 398 LSDGQI 403 (1445)
Q Consensus 398 L~~G~i 403 (1445)
|.+|++
T Consensus 215 l~dG~~ 220 (226)
T COG1136 215 LKDGKI 220 (226)
T ss_pred EeCCee
Confidence 999994
No 83
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1e-38 Score=404.90 Aligned_cols=258 Identities=24% Similarity=0.401 Sum_probs=212.3
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCC--cceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLP--KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYL 155 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 155 (1445)
...++....++++++|..+. +... +..+...| +.+|+|+||++.|+
T Consensus 951 ~~ka~~Aa~~iF~i~dr~~~-----i~~~-~~~~~~~~~~~G~I~~~~V~F~YP-------------------------- 998 (1228)
T KOG0055|consen 951 ISKAKIAAGSIFEILDRKPT-----IDPD-STSGGKLPNVKGDIEFRNVSFAYP-------------------------- 998 (1228)
T ss_pred HHHHHHHHHHHHHHhcCCCC-----CCCC-CCCCCccccceeEEEEeeeEeeCC--------------------------
Confidence 45677888889998888764 2211 13443333 46799999999983
Q ss_pred hhcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEc
Q 000523 156 RIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYIS 232 (1445)
Q Consensus 156 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~ 232 (1445)
+ ++..+||+|+|+++++|+.+||||||||||||...+|-+.++|+ +|.|.+||+++++++. |+++|.|+
T Consensus 999 ----s-RP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVs 1070 (1228)
T KOG0055|consen 999 ----T-RPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVS 1070 (1228)
T ss_pred ----C-CCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceec
Confidence 2 24567999999999999999999999999999999999999999 9999999999998876 58899999
Q ss_pred CCCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccc
Q 000523 233 QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1445)
Q Consensus 233 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1445)
|+|.+|. .|+||||.||.. ....+.+.++++...++++ +.+|++++
T Consensus 1071 QEP~LF~-~TIrENI~YG~~----~vs~~eIi~Aak~ANaH~F-----------------------------I~sLP~Gy 1116 (1228)
T KOG0055|consen 1071 QEPVLFN-GTIRENIAYGSE----EVSEEEIIEAAKLANAHNF-----------------------------ISSLPQGY 1116 (1228)
T ss_pred cCchhhc-ccHHHHHhccCC----CCCHHHHHHHHHHhhhHHH-----------------------------HhcCcCcc
Confidence 9987665 599999999821 1234445555544433222 56899999
Q ss_pred cccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhc
Q 000523 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLF 392 (1445)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~ 392 (1445)
||.||+++. +||||||||++||||+++||+||||||.||+||+++++-+.+.|.+.. .++|+|+.. |+..+.+.+
T Consensus 1117 DT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~--~gRT~IvIA--HRLSTIqna 1191 (1228)
T KOG0055|consen 1117 DTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM--EGRTTIVIA--HRLSTIQNA 1191 (1228)
T ss_pred cCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh--cCCcEEEEe--cchhhhhcC
Confidence 999999887 599999999999999999999999999999999999999999999864 345555543 567899999
Q ss_pred CeEEEecCCeEEEecChhHHHH
Q 000523 393 DDIILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 393 D~iilL~~G~iv~~G~~~~~~~ 414 (1445)
|.|+|+++|+|+++|+|+++++
T Consensus 1192 D~I~Vi~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1192 DVIAVLKNGKVVEQGTHDELLA 1213 (1228)
T ss_pred CEEEEEECCEEEecccHHHHHh
Confidence 9999999999999999999976
No 84
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.2e-37 Score=368.86 Aligned_cols=206 Identities=28% Similarity=0.406 Sum_probs=178.5
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
.+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|+..++|++||+
T Consensus 18 ~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv~ 94 (353)
T TIGR03265 18 TALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTVA 94 (353)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcHH
Confidence 4899999999999999999999999999999999999998 9999999998876544 47899999999999999999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.|+.+.++.. ..+....++++++.+||++..|.. ++.|
T Consensus 95 eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~l~L~~~~~~~-----~~~L 135 (353)
T TIGR03265 95 DNIAYGLKNRGMG----------------------------------RAEVAERVAELLDLVGLPGSERKY-----PGQL 135 (353)
T ss_pred HHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhCC-----hhhC
Confidence 9999986543211 011223567889999998877754 4569
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1445)
||||||||+|||||+.+|++++||||+++||..++.++.+.|+++.+. .+++++.++|+..++..++|+|++|++|+++
T Consensus 136 SgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~-~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~ 214 (353)
T TIGR03265 136 SGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRR-LGVTTIMVTHDQEEALSMADRIVVMNHGVIE 214 (353)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEcCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999987653 3455666888999999999999999999999
Q ss_pred EecChhHHHH
Q 000523 405 YQGPRELVLE 414 (1445)
Q Consensus 405 ~~G~~~~~~~ 414 (1445)
+.|+++++.+
T Consensus 215 ~~g~~~~~~~ 224 (353)
T TIGR03265 215 QVGTPQEIYR 224 (353)
T ss_pred EEcCHHHHHh
Confidence 9999988753
No 85
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-37 Score=369.10 Aligned_cols=205 Identities=25% Similarity=0.368 Sum_probs=177.9
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|.++....+ ++.++||+|++.+++++||+
T Consensus 18 ~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~ 94 (356)
T PRK11650 18 QVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVR 94 (356)
T ss_pred EEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHH
Confidence 4999999999999999999999999999999999999998 9999999999876544 37899999999999999999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.|+.+..+.. ..+...+++++++.+||++..+..+ +.|
T Consensus 95 eNi~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~-----~~L 135 (356)
T PRK11650 95 ENMAYGLKIRGMP----------------------------------KAEIEERVAEAARILELEPLLDRKP-----REL 135 (356)
T ss_pred HHHHhHHhhcCCC----------------------------------HHHHHHHHHHHHHHcCChhHhhCCh-----hhC
Confidence 9999986543210 0011234678899999987776544 569
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1445)
||||||||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+ ..+++++.++|+..++..++|+|++|++|+++
T Consensus 136 SgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~-~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~ 214 (356)
T PRK11650 136 SGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHR-RLKTTSLYVTHDQVEAMTLADRVVVMNGGVAE 214 (356)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998765 33456666888999999999999999999999
Q ss_pred EecChhHHH
Q 000523 405 YQGPRELVL 413 (1445)
Q Consensus 405 ~~G~~~~~~ 413 (1445)
..|+++++.
T Consensus 215 ~~g~~~~~~ 223 (356)
T PRK11650 215 QIGTPVEVY 223 (356)
T ss_pred EECCHHHHH
Confidence 999999874
No 86
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-37 Score=367.43 Aligned_cols=205 Identities=24% Similarity=0.386 Sum_probs=178.2
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
.+|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|+..+++++||+
T Consensus 20 ~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv~ 96 (351)
T PRK11432 20 TVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSLG 96 (351)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999999876555 37899999999999999999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.|+.+.++... .+...+++++++.+||.+..|.. ++.|
T Consensus 97 eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~r~-----~~~L 137 (351)
T PRK11432 97 ENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFEDRY-----VDQI 137 (351)
T ss_pred HHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhhC
Confidence 99999875432110 11223567889999998766544 4569
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1445)
||||||||+|||||+.+|++|+|||||++||+.++.++.+.|+++.+ ..+++++.++|+..++.+++|+|++|++|+++
T Consensus 138 SgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~-~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~ 216 (351)
T PRK11432 138 SGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQ-QFNITSLYVTHDQSEAFAVSDTVIVMNKGKIM 216 (351)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEcCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998765 33455666889999999999999999999999
Q ss_pred EecChhHHH
Q 000523 405 YQGPRELVL 413 (1445)
Q Consensus 405 ~~G~~~~~~ 413 (1445)
..|+++++.
T Consensus 217 ~~g~~~~~~ 225 (351)
T PRK11432 217 QIGSPQELY 225 (351)
T ss_pred EEcCHHHHH
Confidence 999999874
No 87
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-38 Score=363.23 Aligned_cols=215 Identities=27% Similarity=0.383 Sum_probs=191.5
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|++-.+. ...+|+|||++|++||+++|+|||||||||||++|||... +.+|+|.++|.++
T Consensus 5 ~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 577888776653 4679999999999999999999999999999999999887 5689999999987
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000523 926 KQE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 926 ~~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1445)
... ..+|.+|+|+|+-.+||++||+||+.|+.+++. ...+++.+++|+++++.++|.+..+.. +..||||||
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~~--~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVRK--KLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhcC--CCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHH
Confidence 653 457889999999999999999999999977442 344566788999999999999998887 468999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
|||+|||||+.+|++|+||||.|.||..-+..+..-++++.+ .|.|.|++|||.. +.+.+.||+.+|++ |++.-.|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 999999999999999999999999999999999999999875 4999999999986 78899999999985 89988887
Q ss_pred C
Q 000523 1084 L 1084 (1445)
Q Consensus 1084 ~ 1084 (1445)
+
T Consensus 221 P 221 (352)
T COG3842 221 P 221 (352)
T ss_pred H
Confidence 6
No 88
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.8e-37 Score=367.64 Aligned_cols=207 Identities=23% Similarity=0.349 Sum_probs=179.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCce--eEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVS--GTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~--G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 242 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|+++|+ + |+|.++|+++....+ ++.++||+|+..+++++|
T Consensus 19 ~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~t 95 (362)
T TIGR03258 19 TVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHLK 95 (362)
T ss_pred EEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCCc
Confidence 4899999999999999999999999999999999999998 8 999999998866544 467999999999999999
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
|+||+.|+.+..+... .+...+++++++.+||++..|..+ +
T Consensus 96 v~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~~~~~~~~-----~ 136 (362)
T TIGR03258 96 VEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLGDAAAHLP-----A 136 (362)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCCchhhCCh-----h
Confidence 9999999865432110 011234678899999988777554 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1445)
.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|+
T Consensus 137 ~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~ 216 (362)
T TIGR03258 137 QLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGR 216 (362)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 69999999999999999999999999999999999999999999987653225566668899999999999999999999
Q ss_pred EEEecChhHHHH
Q 000523 403 IVYQGPRELVLE 414 (1445)
Q Consensus 403 iv~~G~~~~~~~ 414 (1445)
++..|+++++.+
T Consensus 217 i~~~g~~~~~~~ 228 (362)
T TIGR03258 217 LAAHGEPQALYD 228 (362)
T ss_pred EEEEcCHHHHHh
Confidence 999999998843
No 89
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=2.3e-37 Score=363.79 Aligned_cols=217 Identities=23% Similarity=0.297 Sum_probs=186.0
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.+... .....+|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 5678888776421 012469999999999999999999999999999999999876 46899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000523 927 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1000 (1445)
Q Consensus 927 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1445)
.. ..++.+||++|+..+++..||+||+.+...... .+.++.++++.++++.+||.+..+.. ++.||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~v~e~l~~vgL~~~~~~~-----~~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDN---TPKDEIKRKVTELLALVGLGDKHDSY-----PSNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 31 235679999999999999999999998765432 34455566789999999999887766 45799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEE
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1079 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~ 1079 (1445)
|||||||+|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999865 899999999986 57788999999985 8999
Q ss_pred EEcCC
Q 000523 1080 YVGPL 1084 (1445)
Q Consensus 1080 y~G~~ 1084 (1445)
..|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99985
No 90
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.7e-37 Score=360.56 Aligned_cols=205 Identities=27% Similarity=0.407 Sum_probs=177.3
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1445)
.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+||
T Consensus 21 ~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv 97 (306)
T PRK13537 21 LVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTV 97 (306)
T ss_pred EEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCcH
Confidence 4999999999999999999999999999999999999998 999999999875432 24679999999999999999
Q ss_pred HHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccccc
Q 000523 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1445)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1445)
+||+.|.++..+... .+...+++++++.+||.+..++.++ +
T Consensus 98 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 138 (306)
T PRK13537 98 RENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVG-----E 138 (306)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchh-----h
Confidence 999998665443110 0112245678899999988887665 5
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000523 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1445)
Q Consensus 324 LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1445)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|...++.++||+|++|++|++
T Consensus 139 LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~till~sH~l~e~~~~~d~i~il~~G~i 216 (306)
T PRK13537 139 LSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVIEEGRK 216 (306)
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 55666688999999999999999999999
Q ss_pred EEecChhHHHH
Q 000523 404 VYQGPRELVLE 414 (1445)
Q Consensus 404 v~~G~~~~~~~ 414 (1445)
++.|+.+++.+
T Consensus 217 ~~~g~~~~l~~ 227 (306)
T PRK13537 217 IAEGAPHALIE 227 (306)
T ss_pred EEECCHHHHHh
Confidence 99999998864
No 91
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-37 Score=348.66 Aligned_cols=213 Identities=24% Similarity=0.352 Sum_probs=180.2
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
+++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLR--PDSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 4677776653 2469999999999999999999999999999999999876 458999999987543
Q ss_pred ------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 928 ------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 928 ------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
..+++.++|++|++.+++.+||.|++.+...... ....++.++.++++++.++|.+..+.. +..|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLY-----PAELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCH
Confidence 2345679999999999999999999988643321 123344456688899999998776665 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
||||||+||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~ 217 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVA 217 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999764 899999999986 57788999999985 79999
Q ss_pred EcCC
Q 000523 1081 VGPL 1084 (1445)
Q Consensus 1081 ~G~~ 1084 (1445)
.|+.
T Consensus 218 ~g~~ 221 (235)
T cd03261 218 EGTP 221 (235)
T ss_pred ecCH
Confidence 9875
No 92
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-37 Score=332.05 Aligned_cols=205 Identities=27% Similarity=0.334 Sum_probs=177.2
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC----ccceEEEEcCCC--CCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----PQRTAAYISQHD--NHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d--~~~~ 239 (1445)
++|+|||+++.+||+.+|+|+||||||||.++|+|..+|+ +|+|.++|.+..... ..+.+-+|+||+ .+.|
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP 97 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNP 97 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccCc
Confidence 5999999999999999999999999999999999999999 999999998765542 357789999987 5789
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
..||++.|.-+.+..+.+ +...++.++|+.+||+... -++
T Consensus 98 ~~tv~~~l~Epl~~~~~~------------------------------------~~~~~i~~~L~~VgL~~~~----l~R 137 (252)
T COG1124 98 RRTVGRILSEPLRPHGLS------------------------------------KSQQRIAELLDQVGLPPSF----LDR 137 (252)
T ss_pred chhHHHHHhhhhccCCcc------------------------------------HHHHHHHHHHHHcCCCHHH----Hhc
Confidence 999999997665443221 1112356789999998543 346
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
.+..|||||||||+|||||..+|++|++|||||+||++.+.+|++.|.++.+ ..+.+++.++|+..-+..+||||++|+
T Consensus 138 ~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~-~~~lt~l~IsHdl~~v~~~cdRi~Vm~ 216 (252)
T COG1124 138 RPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKK-ERGLTYLFISHDLALVEHMCDRIAVMD 216 (252)
T ss_pred CchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHH-hcCceEEEEeCcHHHHHHHhhheeeee
Confidence 6778999999999999999999999999999999999999999999998765 567778889999999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000523 400 DGQIVYQGPRELVLE 414 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1445)
+|++++.++.+++..
T Consensus 217 ~G~ivE~~~~~~l~~ 231 (252)
T COG1124 217 NGQIVEIGPTEELLS 231 (252)
T ss_pred CCeEEEeechhhhhc
Confidence 999999999998865
No 93
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=3.6e-37 Score=366.36 Aligned_cols=205 Identities=27% Similarity=0.374 Sum_probs=177.8
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
++|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.++|++||+
T Consensus 28 ~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~ 104 (375)
T PRK09452 28 EVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTVF 104 (375)
T ss_pred EEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999999876544 46799999999999999999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.|+.+..+... .+....++++++.+||++..|..+ ..|
T Consensus 105 eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~p-----~~L 145 (375)
T PRK09452 105 ENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEFAQRKP-----HQL 145 (375)
T ss_pred HHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-----hhC
Confidence 99999865332110 011234677899999987777544 569
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1445)
||||||||+|||||+.+|++|+||||+++||..++..+.+.|+++.+.. ++++|.++|+..++..++|+|++|++|+++
T Consensus 146 SgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i~ 224 (375)
T PRK09452 146 SGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRIE 224 (375)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999886533 455666889999999999999999999999
Q ss_pred EecChhHHH
Q 000523 405 YQGPRELVL 413 (1445)
Q Consensus 405 ~~G~~~~~~ 413 (1445)
..|+++++.
T Consensus 225 ~~g~~~~i~ 233 (375)
T PRK09452 225 QDGTPREIY 233 (375)
T ss_pred EEcCHHHHH
Confidence 999998874
No 94
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=4.5e-37 Score=363.95 Aligned_cols=214 Identities=25% Similarity=0.362 Sum_probs=187.9
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|++.++. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 377888887763 2468999999999999999999999999999999999876 5689999999876
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000523 926 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 926 ~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1445)
.. ...+|.+|||+|+..++|++||+||+.|+...+ ..+..+.++.++++++.++|.++.+.. +..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~-----~~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKY-----PGQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCC-----hhhCCHHHH
Confidence 43 224577999999999999999999999986543 234455667899999999999988876 467999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
|||+|||||+.+|++|+|||||++||+.++..+.+.|+++.++ |.|+|++||+++ ++..++|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998764 899999999986 68899999999986 79999998
Q ss_pred C
Q 000523 1084 L 1084 (1445)
Q Consensus 1084 ~ 1084 (1445)
.
T Consensus 219 ~ 219 (353)
T TIGR03265 219 P 219 (353)
T ss_pred H
Confidence 6
No 95
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-37 Score=364.36 Aligned_cols=214 Identities=24% Similarity=0.356 Sum_probs=186.3
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|++..++ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 67788877662 12469999999999999999999999999999999999876 46899999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000523 927 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1005 (1445)
Q Consensus 927 ~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1445)
.. ..++.+|||+|+..++|++||+||+.|+...+ ..+..+.++.++++++.++|.+..+.. +..|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRK-----PRELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHH
Confidence 32 23478999999999999999999999986543 234455567789999999999888876 3579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1006 Rl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++.+++|++++|++ |+++..|+.
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999999999999999999999999998765 899999999986 68899999999985 899999986
No 96
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.2e-37 Score=395.82 Aligned_cols=255 Identities=27% Similarity=0.427 Sum_probs=203.8
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.+......||+.+++++.++ +++..+. .+.+..+++|+|+++.++.
T Consensus 295 ~~~~~~a~~ri~~~l~~~~~-----~~~~~~~--~~~~~~~I~f~~vsf~y~~--------------------------- 340 (567)
T COG1132 295 LQRASAAAERLFELLDEEPE-----VEDPPDP--LKDTIGSIEFENVSFSYPG--------------------------- 340 (567)
T ss_pred HHHHHHHHHHHHHHHcCCcc-----ccCCCCC--CCCCCCeEEEEEEEEEcCC---------------------------
Confidence 56788888999999988655 3332222 3445677999999999842
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1445)
++++|+|+|++++|||.+||+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 341 ------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd 411 (567)
T COG1132 341 ------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQD 411 (567)
T ss_pred ------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEccc
Confidence 234999999999999999999999999999999999999998 9999999999887765 5789999997
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
+.+|. .||+|||.++.. ....+.+.++++... ..+. +..|+++.||
T Consensus 412 ~~LF~-~TI~~NI~~g~~----~at~eei~~a~k~a~---------------------------~~d~--I~~lp~g~dt 457 (567)
T COG1132 412 PLLFS-GTIRENIALGRP----DATDEEIEEALKLAN---------------------------AHEF--IANLPDGYDT 457 (567)
T ss_pred ceeec-ccHHHHHhcCCC----CCCHHHHHHHHHHhC---------------------------hHHH--HHhCcccccc
Confidence 65555 899999999742 122233444333321 1112 2345888999
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.||+++. .||||||||++||||++++|++|+||||||+||+.++..|.+.++++. +++|+++ +.|.. .+...+|+
T Consensus 458 ~vge~G~-~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRl-sti~~aD~ 532 (567)
T COG1132 458 IVGERGV-NLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRL-STIKNADR 532 (567)
T ss_pred eecCCCc-cCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccH-hHHHhCCE
Confidence 9997655 599999999999999999999999999999999999999999998764 3456666 56655 44555999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|++++.|+++++++
T Consensus 533 IiVl~~G~i~e~G~h~eLl~ 552 (567)
T COG1132 533 IIVLDNGRIVERGTHEELLA 552 (567)
T ss_pred EEEEECCEEEEecCHHHHHH
Confidence 99999999999999999976
No 97
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-37 Score=346.47 Aligned_cols=206 Identities=30% Similarity=0.395 Sum_probs=172.1
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (235)
T cd03261 14 TVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFD 90 (235)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccCC
Confidence 4999999999999999999999999999999999999998 999999999876532 2457999999998899
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
.+||+||+.++.+... +.. ..+....++++++.+||++..++.+
T Consensus 91 ~~tv~~~l~~~~~~~~-~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 134 (235)
T cd03261 91 SLTVFENVAFPLREHT-RLS--------------------------------EEEIREIVLEKLEAVGLRGAEDLYP--- 134 (235)
T ss_pred CCcHHHHHHHHHhhcc-CCC--------------------------------HHHHHHHHHHHHHHcCCchhhcCCh---
Confidence 9999999988643210 000 0011224567789999987666554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.++||+|++|+
T Consensus 135 --~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tvi~vsH~~~~~~~~~d~v~~l~ 211 (235)
T cd03261 135 --AELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKE-LGLTSIMVTHDLDTAFAIADRIAVLY 211 (235)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhcCEEEEEE
Confidence 469999999999999999999999999999999999999999999987642 24556667888889999999999999
Q ss_pred CCeEEEecChhHHH
Q 000523 400 DGQIVYQGPRELVL 413 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1445)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (235)
T cd03261 212 DGKIVAEGTPEELR 225 (235)
T ss_pred CCeEEEecCHHHHc
Confidence 99999999987753
No 98
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-37 Score=342.02 Aligned_cols=207 Identities=29% Similarity=0.420 Sum_probs=180.6
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCC----CcCccceEEEEcCCC-CCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMD----EFVPQRTAAYISQHD-NHIG 239 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 239 (1445)
..+|+|+|+.+++|+.++|+||||||||||+++|+|+++|+ +|+|.++|.+.. ....++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 45999999999999999999999999999999999999998 999999999865 223468899999996 4677
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
.-||.|.++|+.+..+... ++...+++.+++.+||.+.++.
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~r----- 134 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLDR----- 134 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhccC-----
Confidence 8899999999987765421 1234568889999999988764
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
.+..|||||||||+||.+|+.+|++|+|||||+|||+..+.++++.++++.. .++.++|.++|+...+..++|++++|+
T Consensus 135 ~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~-~~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 135 PPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKE-EGGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred CccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-cCCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 4556999999999999999999999999999999999999999999999865 445566668999999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000523 400 DGQIVYQGPRELVLE 414 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1445)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999877754
No 99
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-37 Score=361.66 Aligned_cols=214 Identities=24% Similarity=0.376 Sum_probs=188.0
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++|++..+. ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 478888887763 2468999999999999999999999999999999999876 4689999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000523 926 KQE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 926 ~~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1445)
... ..+|.+|||+|+..++|++||+||+.|+...+. .+..+.+++++++++.++|.++.+.. +..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~-----~~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRY-----VDQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 532 235789999999999999999999999875442 34456667899999999999888766 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++.+++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 68899999999986 79999998
Q ss_pred C
Q 000523 1084 L 1084 (1445)
Q Consensus 1084 ~ 1084 (1445)
.
T Consensus 221 ~ 221 (351)
T PRK11432 221 P 221 (351)
T ss_pred H
Confidence 6
No 100
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.4e-37 Score=395.07 Aligned_cols=255 Identities=23% Similarity=0.340 Sum_probs=194.8
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCC-CcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDL-PKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1445)
.++.+...+|+.++++.+++. ........+. ...+|+|+||++.+..
T Consensus 314 ~~~~~~~~~ri~~~l~~~~~~------~~~~~~~~~~~~~~~i~~~~vsf~~~~-------------------------- 361 (588)
T PRK11174 314 KAQAVGAAESLVTFLETPLAH------PQQGEKELASNDPVTIEAEDLEILSPD-------------------------- 361 (588)
T ss_pred HHHHHHHHHHHHHHHcCCCcc------cCCCccccCCCCCceEEEEeeEEeccC--------------------------
Confidence 467778888988888765431 0000111111 1347999999986521
Q ss_pred hcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcC
Q 000523 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1445)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1445)
+.++|+|+|++++||+.++|+||||||||||+++|+|.+ |+ +|+|.+||+++++... ++.++||+|
T Consensus 362 -------~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q 430 (588)
T PRK11174 362 -------GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQ 430 (588)
T ss_pred -------CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecC
Confidence 124899999999999999999999999999999999999 87 9999999999887754 478999999
Q ss_pred CCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccc
Q 000523 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1445)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1445)
++.+| +.||+|||.++.. ....+.+.++++... .++. +-.|+++.|
T Consensus 431 ~~~LF-~~TI~eNI~~g~~----~~~~eei~~al~~a~---------------------------l~~~--i~~lp~G~d 476 (588)
T PRK11174 431 NPQLP-HGTLRDNVLLGNP----DASDEQLQQALENAW---------------------------VSEF--LPLLPQGLD 476 (588)
T ss_pred CCcCC-CcCHHHHhhcCCC----CCCHHHHHHHHHHhC---------------------------HHHH--HHhcccccc
Confidence 77555 5699999998631 112222222222111 1111 234778889
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcC
Q 000523 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1445)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1445)
|.||+++. .||||||||++|||||+++|++|+||||||+||+.++..|.+.|+++. .++|+|+. +|.. ++.+.||
T Consensus 477 T~vge~G~-~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~TvIiI-tHrl-~~i~~aD 551 (588)
T PRK11174 477 TPIGDQAA-GLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTTLMV-THQL-EDLAQWD 551 (588)
T ss_pred cccccCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEEEEE-ecCh-HHHHhCC
Confidence 99998765 599999999999999999999999999999999999999999998863 34565554 4443 5677899
Q ss_pred eEEEecCCeEEEecChhHHHH
Q 000523 394 DIILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1445)
+|++|++|+++++|+++++.+
T Consensus 552 ~Iivl~~G~i~e~G~~~eL~~ 572 (588)
T PRK11174 552 QIWVMQDGQIVQQGDYAELSQ 572 (588)
T ss_pred EEEEEeCCeEeecCCHHHHHh
Confidence 999999999999999999864
No 101
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=8.1e-37 Score=359.98 Aligned_cols=214 Identities=27% Similarity=0.383 Sum_probs=186.2
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++|++..+. ++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 41 ~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~--p~~G~i~i~G~~~ 105 (340)
T PRK13536 41 AIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTS--PDAGKITVLGVPV 105 (340)
T ss_pred eEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCceEEEECCEEC
Confidence 588899987763 3469999999999999999999999999999999999876 4589999999886
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000523 926 KQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1003 (1445)
Q Consensus 926 ~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1445)
.. ...++.+||++|+..+++.+||.|++.+.+.++. .+..+.++.++++++.++|.+..++.+ +.|||||
T Consensus 106 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~ 177 (340)
T PRK13536 106 PARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGGM 177 (340)
T ss_pred CcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHH
Confidence 43 2345679999999999999999999987665442 223334456788999999998877764 5799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1004 rqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
|||++||++|+++|++|+|||||+|||+.++..+++.|+++.+.|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 178 kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g~ 255 (340)
T PRK13536 178 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEGR 255 (340)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999877999999999986 68889999999986 79999998
Q ss_pred C
Q 000523 1084 L 1084 (1445)
Q Consensus 1084 ~ 1084 (1445)
.
T Consensus 256 ~ 256 (340)
T PRK13536 256 P 256 (340)
T ss_pred H
Confidence 6
No 102
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=5.6e-37 Score=362.19 Aligned_cols=208 Identities=21% Similarity=0.310 Sum_probs=179.3
Q ss_pred cceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCCC
Q 000523 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDN 236 (1445)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1445)
.+.+|+|+|++|++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++....+ ++.++||+|++.
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 345999999999999999999999999999999999999998 9999999999876544 468999999999
Q ss_pred CCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccc
Q 000523 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1445)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1445)
+++++||+||+.|+.+..+... .+...++.++++.+||++..++.+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~p 127 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRYP 127 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCCh
Confidence 9999999999999865543210 011234677899999987766554
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000523 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1445)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1445)
+ .|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+ ..+.+|+.++|+..++..++|+|+
T Consensus 128 ~-----~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~-~~~~Tii~vTHd~~ea~~~~drI~ 201 (363)
T TIGR01186 128 D-----ELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQA-TLQKTIVFITHDLDEAIRIGDRIV 201 (363)
T ss_pred h-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEE
Confidence 4 6999999999999999999999999999999999999999999998754 334556668899999999999999
Q ss_pred EecCCeEEEecChhHHHH
Q 000523 397 LLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1445)
+|++|+++..|+++++..
T Consensus 202 vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 202 IMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEeCCEEEeeCCHHHHHh
Confidence 999999999999998753
No 103
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=8.5e-37 Score=361.57 Aligned_cols=209 Identities=28% Similarity=0.407 Sum_probs=177.3
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|+++|+++....+ ++.++||+|++.+++++||+
T Consensus 16 ~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~ 92 (353)
T PRK10851 16 QVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVF 92 (353)
T ss_pred EEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHH
Confidence 4999999999999999999999999999999999999998 9999999998865444 36799999999999999999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.|+.+..+.... + ...+...+++++++.+||++..|.. +..|
T Consensus 93 eni~~~~~~~~~~~~-----------------~-------------~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~L 137 (353)
T PRK10851 93 DNIAFGLTVLPRRER-----------------P-------------NAAAIKAKVTQLLEMVQLAHLADRY-----PAQL 137 (353)
T ss_pred HHHHhhhhhcccccC-----------------C-------------CHHHHHHHHHHHHHHcCCchhhhCC-----hhhC
Confidence 999997643210000 0 0011223567889999998776654 4569
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1445)
||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+.+++.++|+..++..++|+|++|++|+++
T Consensus 138 SgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~-~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~ 216 (353)
T PRK10851 138 SGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHE-ELKFTSVFVTHDQEEAMEVADRVVVMSQGNIE 216 (353)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998765 33555666889999999999999999999999
Q ss_pred EecChhHHH
Q 000523 405 YQGPRELVL 413 (1445)
Q Consensus 405 ~~G~~~~~~ 413 (1445)
+.|+++++.
T Consensus 217 ~~g~~~~i~ 225 (353)
T PRK10851 217 QAGTPDQVW 225 (353)
T ss_pred EEcCHHHHH
Confidence 999999874
No 104
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=9.2e-37 Score=361.64 Aligned_cols=214 Identities=24% Similarity=0.334 Sum_probs=187.2
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEE--EEEEEcCc
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIT--GNITISGY 923 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~--G~i~i~g~ 923 (1445)
.++++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~--p~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVK--AAGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCCEEEEECCE
Confidence 477888887763 2469999999999999999999999999999999999876 457 99999998
Q ss_pred cCCc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000523 924 PKKQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 924 ~~~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1445)
+... ...++.+|||+|+..++|.+||+||+.|+...+ ..+..+.+++++++++.++|.+..++. ++.||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~-----~~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHL-----PAQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCC-----hhhCCHH
Confidence 7643 223567999999999999999999999986543 234455566789999999999988876 4579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~--g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++..++|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999875 799999999986 68899999999985 79999
Q ss_pred EcCC
Q 000523 1081 VGPL 1084 (1445)
Q Consensus 1081 ~G~~ 1084 (1445)
.|+.
T Consensus 220 ~g~~ 223 (362)
T TIGR03258 220 HGEP 223 (362)
T ss_pred EcCH
Confidence 9986
No 105
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.8e-37 Score=315.50 Aligned_cols=200 Identities=27% Similarity=0.399 Sum_probs=175.5
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1445)
..+|+|||+.|++||++-|+||||||||||||+|.+...|+ .|+|.+||+++..... +|++|+|+|+.-++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 34999999999999999999999999999999999999999 9999999999865532 58999999999999
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+..||.||++|+.+..|... .+.+.++.++|+..||.+.++..
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~l--- 134 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKARAL--- 134 (223)
T ss_pred ccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhhcC---
Confidence 99999999999987765321 23345678899999999888744
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
+..|||||||||+||||++.+|++|+-||||-.||+.++..|++.+.++-. .+|+|+..+|+..-+..+-.+++.|
T Consensus 135 --P~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 135 --PSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred --ccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCcEEEE
Confidence 456999999999999999999999999999999999999999999998743 4666666788988888899999999
Q ss_pred cCCeEEEecC
Q 000523 399 SDGQIVYQGP 408 (1445)
Q Consensus 399 ~~G~iv~~G~ 408 (1445)
++|+++....
T Consensus 211 ~~Grl~~d~~ 220 (223)
T COG2884 211 EDGRLVRDES 220 (223)
T ss_pred eCCEEEeccc
Confidence 9999987643
No 106
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-36 Score=338.98 Aligned_cols=210 Identities=28% Similarity=0.394 Sum_probs=176.3
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 4567776653 2469999999999999999999999999999999999875 458999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000523 928 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1006 (1445)
Q Consensus 928 ~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1006 (1445)
. ..++.++|++|++.+++.+|++|++.+...... ......++.++++++.+++.+..+.. +..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLRG---VPKAEIRARVRELLELVGLEGLLNRY-----PHELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCCHHHHHH
Confidence 2 234579999999988889999999988654321 22334455678999999998777665 35799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1007 l~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
++||++|+.+|++|+|||||+|||+.++..+++.|+++++ .|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999999999999999999999999999999999876 4899999999986 57788999999986 7887655
No 107
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.3e-37 Score=313.02 Aligned_cols=201 Identities=24% Similarity=0.382 Sum_probs=172.8
Q ss_pred cceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 000523 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 248 (1445)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1445)
..++.|++||++||+||||||||||||+|+|+..|. +|+|.+||.+.....| +|-++.++|+..+|.++||++|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 477899999999999999999999999999999998 9999999999887766 478999999999999999999999
Q ss_pred HhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhh
Q 000523 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1445)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1445)
++.. ++-+.. .+....++.++...||..+.+.+. ..|||||
T Consensus 94 LGl~---P~LkL~-------------------------------a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGq 134 (231)
T COG3840 94 LGLS---PGLKLN-------------------------------AEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQ 134 (231)
T ss_pred ccCC---cccccC-------------------------------HHHHHHHHHHHHHhChhhHhhhCc-----cccCchH
Confidence 8752 211100 011235677889999998877554 4699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecC
Q 000523 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1445)
Q Consensus 329 rqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~ 408 (1445)
||||++||+|+++-+||+||||+|+||+.-+.+....+.+++...+.| ++.++|+.+++...+|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~T-llmVTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMT-LLMVTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCE-EEEEeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999988755445 4556677789999999999999999999999
Q ss_pred hhHHH
Q 000523 409 RELVL 413 (1445)
Q Consensus 409 ~~~~~ 413 (1445)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 88764
No 108
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=361.58 Aligned_cols=205 Identities=25% Similarity=0.340 Sum_probs=177.3
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ ++.++||+|++.+++++||.
T Consensus 33 ~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv~ 109 (377)
T PRK11607 33 HAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTVE 109 (377)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999998866544 47899999999999999999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.|+.+.++... .+...+++++++.+||.+..+.. +.+|
T Consensus 110 eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~l~L~~~~~~~-----~~~L 150 (377)
T PRK11607 110 QNIAFGLKQDKLPK----------------------------------AEIASRVNEMLGLVHMQEFAKRK-----PHQL 150 (377)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhhC
Confidence 99999865432110 01223467889999998766644 4569
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1445)
||||||||+|||||+.+|++|+||||+++||..++.++.+.|+++.+.. +.+++.++|+..++..++|+|++|++|+++
T Consensus 151 SgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~laDri~vl~~G~i~ 229 (377)
T PRK11607 151 SGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERV-GVTCVMVTHDQEEAMTMAGRIAIMNRGKFV 229 (377)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEeCCEEE
Confidence 9999999999999999999999999999999999999999998876543 455666889999999999999999999999
Q ss_pred EecChhHHH
Q 000523 405 YQGPRELVL 413 (1445)
Q Consensus 405 ~~G~~~~~~ 413 (1445)
..|+++++.
T Consensus 230 ~~g~~~~~~ 238 (377)
T PRK11607 230 QIGEPEEIY 238 (377)
T ss_pred EEcCHHHHH
Confidence 999999874
No 109
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=8.7e-37 Score=324.44 Aligned_cols=206 Identities=24% Similarity=0.411 Sum_probs=171.7
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCcc----ceEEEEcCCCCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHIGE 240 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~~~ 240 (1445)
.++|++||+++++||+++|+||||+||||||++|+|..++. +|+|.++|+|++...+. +-++||||....|+.
T Consensus 16 ~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~ 92 (237)
T COG0410 16 IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPR 92 (237)
T ss_pred eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhh
Confidence 56999999999999999999999999999999999999987 99999999999887663 568999999999999
Q ss_pred CCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcC-Cccccccccccc
Q 000523 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LDVCADTMVGDE 319 (1445)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 319 (1445)
|||+|||..++..... .. . ...+ .|.+.+.+- |.+..+..-|
T Consensus 93 LTVeENL~~g~~~~~~-~~----------~------~~~~------------------~e~v~~lFP~Lker~~~~aG-- 135 (237)
T COG0410 93 LTVEENLLLGAYARRD-KE----------A------QERD------------------LEEVYELFPRLKERRNQRAG-- 135 (237)
T ss_pred CcHHHHHhhhhhcccc-cc----------c------cccc------------------HHHHHHHChhHHHHhcCccc--
Confidence 9999999987643210 00 0 0000 122222222 3333344433
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
.|||||||-++|||||+++|++|+|||||.||-|.-..+|.+.++++.+ .++.+|+.+.|+...+.+.+|+.++|.
T Consensus 136 ---~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~-~~g~tIlLVEQn~~~Al~iaDr~yvle 211 (237)
T COG0410 136 ---TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRK-EGGMTILLVEQNARFALEIADRGYVLE 211 (237)
T ss_pred ---CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHH-cCCcEEEEEeccHHHHHHhhCEEEEEe
Confidence 5999999999999999999999999999999999999999999999865 445677889999999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000523 400 DGQIVYQGPRELVLE 414 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1445)
+|+|++.|+.+++.+
T Consensus 212 ~Griv~~G~~~eL~~ 226 (237)
T COG0410 212 NGRIVLSGTAAELLA 226 (237)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999998864
No 110
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.9e-37 Score=339.47 Aligned_cols=214 Identities=23% Similarity=0.330 Sum_probs=187.7
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.+++++|.+.. +..+|+|+|+.|++||.++|+|+||||||||+++|+|... +.+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~--p~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLK--PTSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCc--CCCCEEEECCeecc
Confidence 567888888742 2479999999999999999999999999999999999876 45799999998855
Q ss_pred ----cccccceEEEeccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 927 ----QETFARISGYCEQNDIH-SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 927 ----~~~~~~~~gyv~Q~d~~-~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
...+++.+|||+|++.. +..-||.|.+.|+..-. ..+.++.+++++++++.+++.+.++.. +..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 34578889999999765 45679999999986432 345566888999999999999998876 468999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
||||||+||.+|+.+|++|+|||||||||+.++..+++.++++..+ |.|||++|||.. .+.+.+|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999876 689999999986 58888999999986 79999
Q ss_pred EcCC
Q 000523 1081 VGPL 1084 (1445)
Q Consensus 1081 ~G~~ 1084 (1445)
.|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9985
No 111
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=9.1e-37 Score=356.52 Aligned_cols=201 Identities=27% Similarity=0.380 Sum_probs=176.7
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc--ccccceEEEeccCCCCCCCCCH
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVTI 949 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 949 (1445)
+.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.+||++|++.+++.+||
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 83 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLTG 83 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCcH
Confidence 569999999999999999999999999999999999876 458999999987643 2345679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000523 950 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1445)
Q Consensus 950 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgL 1029 (1445)
+|++.+.+.++. ......++.++++++.++|.+..+..+ +.|||||||||+||+||+.+|++|+|||||+||
T Consensus 84 ~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gL 155 (302)
T TIGR01188 84 RENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGL 155 (302)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 999998765542 223344556889999999988777764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1030 D~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
|+.++..+++.|+++.++|+|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 156 D~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 156 DPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999877999999999986 68889999999985 799999985
No 112
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.8e-37 Score=311.45 Aligned_cols=196 Identities=25% Similarity=0.344 Sum_probs=172.3
Q ss_pred cceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcc-cccceEEEeccCCCCCCCCCHHHHHHH
Q 000523 877 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-TFARISGYCEQNDIHSPFVTIYESLLF 955 (1445)
Q Consensus 877 ~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f 955 (1445)
..+..|.+||++||+||||||||||||.|+|... +.+|+|.|||.+.... ...|-++.++|+..+|.++||++|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~--P~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFET--PASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccC--CCCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 4678899999999999999999999999999887 4589999999886542 356778999999999999999999987
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000523 956 SAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1035 (1445)
Q Consensus 956 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~ 1035 (1445)
+..-.+ ... .+.+++++.++..+||.++.+.+. ..|||||||||++||+|+++-+|++||||+|.|||.-+.
T Consensus 95 Gl~P~L--kL~-a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLSPGL--KLN-AEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCCccc--ccC-HHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 642111 122 344567899999999999998884 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1036 IVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1036 ~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
++..++.++++ ++.|++++||+|+ |+....|+++++++ |++.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 99999999986 5899999999997 79999999999986 899999986
No 113
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-36 Score=361.97 Aligned_cols=205 Identities=26% Similarity=0.387 Sum_probs=175.9
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|+..+++.+||+
T Consensus 17 ~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv~ 93 (369)
T PRK11000 17 VISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSVA 93 (369)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCHH
Confidence 4899999999999999999999999999999999999998 9999999998865443 46799999999999999999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.|+.+..+... .+...+++++++.+||++..+..+ ..|
T Consensus 94 eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~lgL~~~~~~~~-----~~L 134 (369)
T PRK11000 94 ENMSFGLKLAGAKK----------------------------------EEINQRVNQVAEVLQLAHLLDRKP-----KAL 134 (369)
T ss_pred HHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCCh-----hhC
Confidence 99999765332100 011234677899999987766554 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1445)
||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|+++
T Consensus 135 SgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~ 213 (369)
T PRK11000 135 SGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRVA 213 (369)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876533 455666788889999999999999999999
Q ss_pred EecChhHHH
Q 000523 405 YQGPRELVL 413 (1445)
Q Consensus 405 ~~G~~~~~~ 413 (1445)
..|+++++.
T Consensus 214 ~~g~~~~i~ 222 (369)
T PRK11000 214 QVGKPLELY 222 (369)
T ss_pred EEcCHHHHH
Confidence 999998874
No 114
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.6e-36 Score=359.15 Aligned_cols=216 Identities=25% Similarity=0.382 Sum_probs=185.6
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+. .+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 56778877653 2469999999999999999999999999999999999876 45899999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000523 927 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 927 ~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1445)
.. ..++.+|||+|+..++|.+||+||+.|....+.. ...+.++.+++++++++.++|.+..+.. +..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRY-----PAQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 32 2346799999999999999999999997654211 1234455566789999999998887776 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++...+|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999986 68899999999985 79999998
Q ss_pred C
Q 000523 1084 L 1084 (1445)
Q Consensus 1084 ~ 1084 (1445)
.
T Consensus 221 ~ 221 (353)
T PRK10851 221 P 221 (353)
T ss_pred H
Confidence 6
No 115
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.1e-35 Score=372.08 Aligned_cols=217 Identities=29% Similarity=0.437 Sum_probs=180.6
Q ss_pred ccCCCceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEE
Q 000523 840 LPFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNIT 919 (1445)
Q Consensus 840 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~ 919 (1445)
.|.-+..++++|++|.+... ...+|+|+|++|+|||.+||+|+||||||||+|+|+|..+ +..|+|.
T Consensus 465 ~~~~~g~I~~~nvsf~y~~~-----------~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~ 531 (709)
T COG2274 465 LPKLQGEIEFENVSFRYGPD-----------DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRIL 531 (709)
T ss_pred ccccCceEEEEEEEEEeCCC-----------CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEE
Confidence 34445689999999998632 2369999999999999999999999999999999999877 5689999
Q ss_pred EcCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccc
Q 000523 920 ISGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-------LRQS 989 (1445)
Q Consensus 920 i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~ 989 (1445)
+||+++++ ..+|+.+|||+|++.++. -|++||+.++. ++.+.++ +.++++..|..+ -.++
T Consensus 532 ~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e~----i~~A~~~ag~~~fI~~lP~gy~t 601 (709)
T COG2274 532 LDGVDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDEE----IIEAAQLAGAHEFIENLPMGYDT 601 (709)
T ss_pred ECCEeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHHH----HHHHHHHhCcHHHHHhccccccc
Confidence 99998754 567899999999988765 69999998752 3333332 334444444332 3456
Q ss_pred cccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceE
Q 000523 990 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1069 (1445)
Q Consensus 990 ~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v 1069 (1445)
.+|.. ..+||||||||++|||+|+++|+||+||||||+||+.+.+.|++.|.++. .|+|+|+++|+++ ....+|++
T Consensus 602 ~v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrI 677 (709)
T COG2274 602 PVGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRI 677 (709)
T ss_pred ccccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEE
Confidence 66654 46899999999999999999999999999999999999999999999985 4799999999986 57889999
Q ss_pred eEEecCcEEEEEcCC
Q 000523 1070 FLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1070 ~~l~~gG~~~y~G~~ 1084 (1445)
++|++ |+++..|+.
T Consensus 678 iVl~~-Gkiv~~gs~ 691 (709)
T COG2274 678 IVLDQ-GKIVEQGSH 691 (709)
T ss_pred EEccC-CceeccCCH
Confidence 99985 899999996
No 116
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-36 Score=335.71 Aligned_cols=209 Identities=24% Similarity=0.417 Sum_probs=176.9
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
+++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH
Confidence 4667776652 2469999999999999999999999999999999999865 458999999987643
Q ss_pred ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHH
Q 000523 928 ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRL 1007 (1445)
Q Consensus 928 ~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl 1007 (1445)
..++.++|++|++.+++.+|++|++.+....+. ......++.++++++.+++.+..+.. +..||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKR-----VEELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCc-----HhhCCHHHHHHH
Confidence 345679999999988889999999988655432 22333445678999999998776665 357999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1008 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1008 ~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
+||++|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999998877899999999986 57788999999986 7887654
No 117
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-36 Score=357.66 Aligned_cols=206 Identities=27% Similarity=0.375 Sum_probs=175.6
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1445)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 45999999999999999999999999999999999999998 9999999998865432 35799999999899
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+.+||+||+.++.+..+... .+....++++++.+||++..++.+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 138 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLELVGLSDKADRYP-- 138 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998764432100 011224567889999987766554
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
+.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.++||+|++|
T Consensus 139 ---~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 139 ---AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRE-LGLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEEE
Confidence 469999999999999999999999999999999999999999999987653 3455666888889999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 118
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.8e-36 Score=337.76 Aligned_cols=208 Identities=23% Similarity=0.318 Sum_probs=174.9
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.+.. +.+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehh
Confidence 467788777631 12369999999999999999999999999999999999875 45899999998753
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000523 927 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1000 (1445)
Q Consensus 927 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1445)
.. .+++.++|++|++.+++.+||.|++.+....+. ......++.++++++.+++.+..+..+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 245679999999988999999999988754432 223344556889999999988777653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ .+.+.+|++++|++ |+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999999999999999999999999999777899999999986 57778999999986 44
No 119
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-36 Score=337.01 Aligned_cols=200 Identities=26% Similarity=0.397 Sum_probs=172.6
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHH
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYE 951 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E 951 (1445)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... .++.++|++|++.+++.+|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 469999999999999999999999999999999999865 458999999987642 3567999999998888899999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000523 952 SLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1031 (1445)
Q Consensus 952 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~ 1031 (1445)
++.+....+. ......++.++++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 93 ~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~ 164 (220)
T cd03293 93 NVALGLELQG---VPKAEARERAEELLELVGLSGFENAY-----PHQLSGGMRQRVALARALAVDPDVLLLDEPFSALDA 164 (220)
T ss_pred HHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCH
Confidence 9988754432 22334455688999999998776665 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEec-CcEEEEEcCC
Q 000523 1032 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGQEIYVGPL 1084 (1445)
Q Consensus 1032 ~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~-gG~~~y~G~~ 1084 (1445)
.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ .|+++..++.
T Consensus 165 ~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 165 LTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999865 4899999999986 57788999999985 4899888764
No 120
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=2.5e-36 Score=353.05 Aligned_cols=214 Identities=27% Similarity=0.373 Sum_probs=182.8
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++|+++.+. ++.+|+|||++|++||++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMIS--PDRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 367888887763 2469999999999999999999999999999999999875 4589999999875
Q ss_pred Cc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000523 926 KQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1003 (1445)
Q Consensus 926 ~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1445)
.. ...++.+||++|++.+++.+||+|++.+.+..+. .+....++.++++++.++|.+..++.+ +.|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 32 2245679999999999999999999987554331 233334456788999999988777764 5799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1004 rqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
|||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 57788999999985 79999998
Q ss_pred C
Q 000523 1084 L 1084 (1445)
Q Consensus 1084 ~ 1084 (1445)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 121
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-36 Score=336.90 Aligned_cols=212 Identities=29% Similarity=0.377 Sum_probs=179.6
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
.++|+++.+. ++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 66 (220)
T cd03265 2 EVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVR 66 (220)
T ss_pred EEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCc
Confidence 4677776653 2469999999999999999999999999999999999865 458999999976532
Q ss_pred --ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000523 928 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1005 (1445)
Q Consensus 928 --~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1445)
...++.++|++|++.+++.+||+|++.+....+. ...++.++.++++++.++|.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 138 (220)
T cd03265 67 EPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRR 138 (220)
T ss_pred ChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHH
Confidence 2334679999999989999999999988754432 223334556889999999987777653 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1006 Rl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 139 r~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 139 RLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 999999999999999999999999999999999999999876 899999999986 57788999999985 799988874
No 122
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.1e-36 Score=356.44 Aligned_cols=205 Identities=27% Similarity=0.392 Sum_probs=176.2
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1445)
.+|+|||++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+||++|++.+++.+||
T Consensus 55 ~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~tv 131 (340)
T PRK13536 55 AVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFTV 131 (340)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCcH
Confidence 4999999999999999999999999999999999999998 999999999875432 24679999999989999999
Q ss_pred HHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccccc
Q 000523 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1445)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1445)
+||+.+.....+... .+....++++++.+||++..++.++ +
T Consensus 132 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~~-----~ 172 (340)
T PRK13536 132 RENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADARVS-----D 172 (340)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhCCChh-----h
Confidence 999997654432100 0011235667889999988877665 5
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000523 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1445)
Q Consensus 324 LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1445)
|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++.. . +++|+.++|+..++.++||+|++|++|++
T Consensus 173 LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~-g~tilisSH~l~e~~~~~d~i~il~~G~i 250 (340)
T PRK13536 173 LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLEAGRK 250 (340)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999854 3 45566688999999999999999999999
Q ss_pred EEecChhHHHH
Q 000523 404 VYQGPRELVLE 414 (1445)
Q Consensus 404 v~~G~~~~~~~ 414 (1445)
+++|+.+++.+
T Consensus 251 ~~~g~~~~l~~ 261 (340)
T PRK13536 251 IAEGRPHALID 261 (340)
T ss_pred EEEcCHHHHHh
Confidence 99999998865
No 123
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.7e-36 Score=358.80 Aligned_cols=214 Identities=22% Similarity=0.323 Sum_probs=187.1
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 478889887763 2469999999999999999999999999999999999876 4589999999876
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000523 926 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 926 ~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1445)
.. ...+|.+||++|+..++|.+||.||+.|+...+. .+..+.++.++++++.++|.+..+.. +..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----p~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQK---TPAAEITPRVMEALRMVQLEEFAQRK-----PHQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCCHHHH
Confidence 43 2235779999999999999999999999865432 33445566789999999999888876 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
|||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999764 899999999986 68899999999985 89999998
Q ss_pred C
Q 000523 1084 L 1084 (1445)
Q Consensus 1084 ~ 1084 (1445)
.
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 6
No 124
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3e-36 Score=335.25 Aligned_cols=210 Identities=26% Similarity=0.389 Sum_probs=177.0
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCc
Confidence 4677776653 2369999999999999999999999999999999999865 458999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000523 928 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1006 (1445)
Q Consensus 928 ~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1006 (1445)
. ..++.++|++|++.+++..|++|++.+....+. ...++.++.++++++.+++.+..+..+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRK---VPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHH
Confidence 2 224579999999988889999999988654331 223344556788999999987777653 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1007 l~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
++||++|+.+|++++|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++++|
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999764 899999999986 57788999999985 7888776
No 125
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.3e-37 Score=318.03 Aligned_cols=205 Identities=26% Similarity=0.365 Sum_probs=182.2
Q ss_pred CceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCccc----ccceEEEeccCCCCCC
Q 000523 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQET----FARISGYCEQNDIHSP 945 (1445)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~d~~~~ 945 (1445)
++++++++||+.|++||++||+|||||||||.+.++.|... +.+|.|.+||.++.... -+.-+||.||++..|.
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~--~d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVR--PDSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEe--cCCceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 45689999999999999999999999999999999999876 45899999999876532 2335899999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000523 946 FVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1025 (1445)
Q Consensus 946 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEP 1025 (1445)
.+||+||++.....+.. +....+++++++++++.+++.++++... ..||||||+|+.|||||+.+|+.++||||
T Consensus 93 ~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLDEP 166 (243)
T COG1137 93 KLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLDEP 166 (243)
T ss_pred cCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999877666542 2233466677899999999999999873 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1026 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1026 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
++|+||-+-..|.++++.+.+.|..|++|-|+-. +....+||.+++.+ |+++..|.+
T Consensus 167 FAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p 223 (243)
T COG1137 167 FAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSP 223 (243)
T ss_pred ccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCH
Confidence 9999999999999999999999999999999987 78999999999986 799999986
No 126
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-37 Score=329.21 Aligned_cols=221 Identities=29% Similarity=0.421 Sum_probs=189.0
Q ss_pred ccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCcc----ceEEEEcCCCCCC
Q 000523 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNHI 238 (1445)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1445)
....+++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...++ .-++--+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 4567999999999999999999999999999999999999999 99999999999888764 4578899999999
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
++|||.||+..++..+.. ... . .. .|. ...+..+...++.++|+.+||.+.+|+..|+
T Consensus 92 ~~lTVlENv~va~~~~~~---~~~---~------l~-~~~---------~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~ 149 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LSG---L------LG-RPR---------ARKEEREARERARELLEFVGLGELADRPAGN 149 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hhh---h------hc-ccc---------chhhHHHHHHHHHHHHHHcCCchhhcchhhc
Confidence 999999999998654321 000 0 00 000 0011223455678899999999999988875
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.|+++.+ .++.+|+.|.|++.-+..+||||+||
T Consensus 150 -----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri~Vl 223 (250)
T COG0411 150 -----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRIVVL 223 (250)
T ss_pred -----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEEEec
Confidence 999999999999999999999999999999999999999999999865 45677888999999999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 000523 399 SDGQIVYQGPRELVLE 414 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1445)
+.|+++.+|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999864
No 127
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.3e-36 Score=340.42 Aligned_cols=215 Identities=26% Similarity=0.354 Sum_probs=179.1
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 4567766652 2469999999999999999999999999999999999875 458999999987643
Q ss_pred c---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCC-------CCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000523 928 E---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPE-------VDSETRKMFIDEVMELVELNPLRQSLVGLPGV 996 (1445)
Q Consensus 928 ~---~-~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~-------~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1445)
. . .++.++|++|++.+++.+||+|++.+....+.... ......++.++++++.+++.+..+.. +
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRP-----A 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCC-----h
Confidence 2 1 23458999999999999999999988754332110 11233445688999999998776665 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++.|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 579999999999999999999999999999999999999999999999877899999999987 57788999999985 7
Q ss_pred EEEEEcCC
Q 000523 1077 QEIYVGPL 1084 (1445)
Q Consensus 1077 ~~~y~G~~ 1084 (1445)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 99998875
No 128
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=325.50 Aligned_cols=217 Identities=26% Similarity=0.337 Sum_probs=179.4
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++.+|++..+.... ....+|+|||++|.+||++||+|+||||||||.++|+|... +.+|+|.++|.+.
T Consensus 3 ~l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~--p~~G~I~~~G~~~ 71 (252)
T COG1124 3 LLSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEK--PSSGSILLDGKPL 71 (252)
T ss_pred eEEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccC--CCCceEEECCccc
Confidence 367788877664321 11259999999999999999999999999999999999876 4689999999876
Q ss_pred Ccc----cccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCc
Q 000523 926 KQE----TFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSG 998 (1445)
Q Consensus 926 ~~~----~~~~~~gyv~Q~d~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~ 998 (1445)
... .+.+.+.+|+||+. +.|..||++.|.=.... ...++.+ +++.++++.+||.+- .+.. +..
T Consensus 72 ~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~--~~i~~~L~~VgL~~~~l~R~-----P~e 141 (252)
T COG1124 72 APKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQ--QRIAELLDQVGLPPSFLDRR-----PHE 141 (252)
T ss_pred CccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHH--HHHHHHHHHcCCCHHHHhcC-----chh
Confidence 543 36788999999975 67899999988655433 1222222 238999999999753 3333 467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 999 LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
||||||||++|||||+.+|++|+||||||.||+..+++|++.|.++.++ +.|.|+++||.+. +..+|||+++|++ |+
T Consensus 142 LSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~-v~~~cdRi~Vm~~-G~ 219 (252)
T COG1124 142 LSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLAL-VEHMCDRIAVMDN-GQ 219 (252)
T ss_pred cChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHH-HHHHhhheeeeeC-Ce
Confidence 9999999999999999999999999999999999999999999999764 7899999999874 8889999999996 79
Q ss_pred EEEEcCCC
Q 000523 1078 EIYVGPLG 1085 (1445)
Q Consensus 1078 ~~y~G~~~ 1085 (1445)
++..+|.+
T Consensus 220 ivE~~~~~ 227 (252)
T COG1124 220 IVEIGPTE 227 (252)
T ss_pred EEEeechh
Confidence 99999974
No 129
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-36 Score=348.27 Aligned_cols=218 Identities=27% Similarity=0.402 Sum_probs=177.1
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC-----ccceEEEEcCCCC-CC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDN-HI 238 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 238 (1445)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 35999999999999999999999999999999999999998 999999999886532 2467999999863 44
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc--ccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD--VCADTMV 316 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 316 (1445)
+.+||+||+.|+....+.. .++....++++++.+||+ +..|+
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~-- 140 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------------------------------EEEIENRVKRAMNIVGLDYEDYKDK-- 140 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------------------------------HHHHHHHHHHHHHHcCCCchhhccC--
Confidence 5689999999865432210 011223467789999996 44454
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000523 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1445)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1445)
.++.||||||||++||+||+.+|++|+|||||+|||+.++.++.+.|+++.+ ..+++|+.++|+..++.++||+|+
T Consensus 141 ---~~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 141 ---SPFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHK-EYNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred ---CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEE
Confidence 4457999999999999999999999999999999999999999999998865 335566668888899999999999
Q ss_pred EecCCeEEEecChhHHHH---HHHhcCCCCCC
Q 000523 397 LLSDGQIVYQGPRELVLE---FFASMGFRCPK 425 (1445)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~f~~lG~~cp~ 425 (1445)
+|++|+++++|+.+++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988753 23344555443
No 130
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-36 Score=335.62 Aligned_cols=199 Identities=29% Similarity=0.448 Sum_probs=166.7
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 14 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 90 (213)
T cd03259 14 RALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVA 90 (213)
T ss_pred eeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHH
Confidence 4999999999999999999999999999999999999998 9999999998764332 35799999998888899999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.++....+.. . .+....++++++.+||++..++.+ ..|
T Consensus 91 ~~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 131 (213)
T cd03259 91 ENIAFGLKLRGVP-K---------------------------------AEIRARVRELLELVGLEGLLNRYP-----HEL 131 (213)
T ss_pred HHHHhHHHHcCCC-H---------------------------------HHHHHHHHHHHHHcCChhhhhcCh-----hhC
Confidence 9998864322100 0 001123566788999987666554 459
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1445)
||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++.. .+++|+.++|+..++.++||+|++|++|+++
T Consensus 132 SgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~ 210 (213)
T cd03259 132 SGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRE-LGITTIYVTHDQEEALALADRIAVMNEGRIV 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEecCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999987643 3455666888888999999999999999998
Q ss_pred Eec
Q 000523 405 YQG 407 (1445)
Q Consensus 405 ~~G 407 (1445)
+.|
T Consensus 211 ~~g 213 (213)
T cd03259 211 QVG 213 (213)
T ss_pred ecC
Confidence 765
No 131
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-36 Score=356.04 Aligned_cols=217 Identities=22% Similarity=0.294 Sum_probs=183.9
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|++++++.. ..++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5678888776411 013569999999999999999999999999999999999876 45899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000523 927 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1000 (1445)
Q Consensus 927 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1445)
.. ..++.+||++|++.+++.+||+||+.+....+. .+..+.++.++++++.++|.+..+.. ++.||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRY-----PAQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 31 235679999999999999999999998755432 23344456788999999998877765 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEE
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1079 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~ 1079 (1445)
||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 57788999999985 8999
Q ss_pred EEcCC
Q 000523 1080 YVGPL 1084 (1445)
Q Consensus 1080 y~G~~ 1084 (1445)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99985
No 132
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=315.54 Aligned_cols=207 Identities=30% Similarity=0.456 Sum_probs=175.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCcc---ceEEEEcCCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lT 242 (1445)
.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|+|.+||.+++++.+. +.-+..+|+..+-+..|
T Consensus 15 ~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpFt 91 (259)
T COG4559 15 RLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPFT 91 (259)
T ss_pred eeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccceE
Confidence 4999999999999999999999999999999999999999 99999999999888764 56789999988888889
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
|+|-+.+++.-.+.+.. | .+...+++.+|...++.+.+. +..+
T Consensus 92 v~eVV~mGr~p~~~g~~-----------------~---------------~e~~~i~~~ala~~d~~~la~-----R~y~ 134 (259)
T COG4559 92 VQEVVQMGRIPHRSGRE-----------------P---------------EEDERIAAQALAATDLSGLAG-----RDYR 134 (259)
T ss_pred HHHHHHhcccccccCCC-----------------c---------------hhhHHHHHHHHHHcChhhhhc-----cchh
Confidence 99999998743322111 0 012234666777777776554 3456
Q ss_pred cCChhhhhHHHHHHHHhc------CCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000523 323 GISGGQKKRVTTGEMMVG------PALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~------~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1445)
.|||||||||.+||.|+. ++++||||||||+||...+..+++..|++++. + ..|+.+.|+..-+..+||+|+
T Consensus 135 ~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLAA~YaDriv 212 (259)
T COG4559 135 TLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLAAQYADRIV 212 (259)
T ss_pred hcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHHHHhhheee
Confidence 799999999999999985 45689999999999999999999999999873 3 556668899999999999999
Q ss_pred EecCCeEEEecChhHHHH
Q 000523 397 LLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1445)
+|++||++..|++++++.
T Consensus 213 ll~~Grv~a~g~p~~vlt 230 (259)
T COG4559 213 LLHQGRVIASGSPQDVLT 230 (259)
T ss_pred eeeCCeEeecCCHHHhcC
Confidence 999999999999998763
No 133
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=4.3e-36 Score=338.54 Aligned_cols=212 Identities=26% Similarity=0.361 Sum_probs=179.0
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
.++|+++.++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 4667776653 2469999999999999999999999999999999999876 458999999987542
Q ss_pred c---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000523 928 E---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1003 (1445)
Q Consensus 928 ~---~-~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1445)
. . .++.++|++|++.+++.+||+|++.+....+. ......++.++++++.+++.+..+.. +..|||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSK-----ASSLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHH
Confidence 1 1 23468999999999999999999987643322 22333445678899999998776665 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1004 rqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++.|+
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 216 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGT 216 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeC
Confidence 99999999999999999999999999999999999999999877899999999986 58889999999985 79999887
Q ss_pred C
Q 000523 1084 L 1084 (1445)
Q Consensus 1084 ~ 1084 (1445)
.
T Consensus 217 ~ 217 (232)
T cd03218 217 P 217 (232)
T ss_pred H
Confidence 5
No 134
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.8e-36 Score=338.81 Aligned_cols=216 Identities=27% Similarity=0.393 Sum_probs=180.4
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 67788887763 2469999999999999999999999999999999999875 45899999998764
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000523 927 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSP-EVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 927 ~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1445)
.. ..++.++|++|++.+++.+||+|++.+....+... .......++.++++++.++|.+..+.. +..||||||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRY-----PAQLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCCHHHH
Confidence 32 22456999999998888999999998865432110 012233345678899999998776665 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 220 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVGT 220 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecC
Confidence 9999999999999999999999999999999999999999765 899999999986 57788999999985 78999987
Q ss_pred C
Q 000523 1084 L 1084 (1445)
Q Consensus 1084 ~ 1084 (1445)
.
T Consensus 221 ~ 221 (239)
T cd03296 221 P 221 (239)
T ss_pred H
Confidence 5
No 135
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.7e-36 Score=335.80 Aligned_cols=215 Identities=27% Similarity=0.409 Sum_probs=179.2
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+... .....+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcc
Confidence 4567777766311 011269999999999999999999999999999999999875 45899999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000523 927 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 927 ~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1445)
. ..+++.++|++|++.+++.+||+|++.+....+. ....+..+.++++++.+++.+..+.. +..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRR-----VGGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhh-----hhhcCHHHH
Confidence 3 2345679999999988899999999987654432 23344456788999999998777765 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999777999999999986 57788999999986 7877654
No 136
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-36 Score=356.01 Aligned_cols=214 Identities=24% Similarity=0.358 Sum_probs=186.7
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|++..+. +..+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 488888887663 2469999999999999999999999999999999999876 4589999999876
Q ss_pred Cc-ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000523 926 KQ-ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 926 ~~-~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1445)
.. ...+|.+||++|+..++|++||.||+.|+...+. .+..+.+++++++++.++|.+..+.. +.+||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~l~L~~~~~~~-----~~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQDK---LPKAEIASRVNEMLGLVHMQEFAKRK-----PHQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 43 2346789999999999999999999999765432 33455566789999999999887776 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
|||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+ .|.|+|++|||+. ++..++|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 999999999999999999999999999999999999998865 4899999999986 68899999999985 79999998
Q ss_pred C
Q 000523 1084 L 1084 (1445)
Q Consensus 1084 ~ 1084 (1445)
.
T Consensus 234 ~ 234 (377)
T PRK11607 234 P 234 (377)
T ss_pred H
Confidence 6
No 137
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-36 Score=358.16 Aligned_cols=214 Identities=25% Similarity=0.372 Sum_probs=184.6
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 367888887763 2469999999999999999999999999999999999876 4589999999876
Q ss_pred Ccc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000523 926 KQE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 926 ~~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1445)
... ..++.+||++|+..+++.+||+||+.|....+. .+..+.++.++++++.++|.+..+.. +..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~-----~~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRK-----PKALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCC-----hhhCCHHHH
Confidence 431 234679999999999999999999998765432 23344556789999999998877766 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
|||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++.+.+|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998764 899999999986 68889999999985 89999998
Q ss_pred C
Q 000523 1084 L 1084 (1445)
Q Consensus 1084 ~ 1084 (1445)
.
T Consensus 218 ~ 218 (369)
T PRK11000 218 P 218 (369)
T ss_pred H
Confidence 6
No 138
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.8e-36 Score=346.74 Aligned_cols=204 Identities=20% Similarity=0.218 Sum_probs=152.2
Q ss_pred CceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCc
Q 000523 844 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 923 (1445)
Q Consensus 844 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 923 (1445)
|..+.+.+|.+.++.. .-+++.+++..++.-...+++|+||+||||++|++.|..+ +..|-+.+++
T Consensus 360 ~p~l~i~~V~f~y~p~-----------~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~- 425 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTPS-----------EYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP- 425 (582)
T ss_pred CCeeEEEeeeccCCCc-----------chhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc-
Confidence 3457777777665421 1268899999999999999999999999999999998655 3466665544
Q ss_pred cCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000523 924 PKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1003 (1445)
Q Consensus 924 ~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1445)
++.++|-.|..+-+-.+.|.+- .+-...+. .... +.+++-+..+||..-.- ...+.+|||||
T Consensus 426 -------r~ri~~f~Qhhvd~l~~~v~~v-d~~~~~~p--G~~~----ee~r~hl~~~Gl~g~la----~~si~~LSGGQ 487 (582)
T KOG0062|consen 426 -------RLRIKYFAQHHVDFLDKNVNAV-DFMEKSFP--GKTE----EEIRRHLGSFGLSGELA----LQSIASLSGGQ 487 (582)
T ss_pred -------cceecchhHhhhhHHHHHhHHH-HHHHHhCC--CCCH----HHHHHHHHhcCCCchhh----hccccccCCcc
Confidence 4568999998665544454432 23223331 2222 22556778888865321 11257899999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1004 rqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
|-||++|.....+|.+|+|||||+.||..+-..+-++|++. +..||+++|+-+. +-..|+++.+.++|.-.-+.|.
T Consensus 488 KsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ieg~ 563 (582)
T KOG0062|consen 488 KSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIEGG 563 (582)
T ss_pred hhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeeecc
Confidence 99999999999999999999999999999999999999876 4689999999764 7788999999997655555554
No 139
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-36 Score=335.18 Aligned_cols=204 Identities=29% Similarity=0.384 Sum_probs=171.5
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1445)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (220)
T cd03265 14 EAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELTG 90 (220)
T ss_pred EeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCcH
Confidence 4999999999999999999999999999999999999998 999999998764321 23579999999888999999
Q ss_pred HHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccccc
Q 000523 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1445)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1445)
+||+.+..+..+... .+....++++++.+||++..++.++ .
T Consensus 91 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~ 131 (220)
T cd03265 91 WENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRLVK-----T 131 (220)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCChh-----h
Confidence 999998654322100 0112245678999999876666554 5
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000523 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1445)
Q Consensus 324 LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1445)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+..++.+.+|++++|++|++
T Consensus 132 LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i 210 (220)
T cd03265 132 YSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKE-EFGMTILLTTHYMEEAEQLCDRVAIIDHGRI 210 (220)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999998765 3245566688888999999999999999999
Q ss_pred EEecChhHH
Q 000523 404 VYQGPRELV 412 (1445)
Q Consensus 404 v~~G~~~~~ 412 (1445)
++.|+.+++
T Consensus 211 ~~~~~~~~~ 219 (220)
T cd03265 211 IAEGTPEEL 219 (220)
T ss_pred EEeCChHHc
Confidence 999987653
No 140
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.6e-36 Score=352.68 Aligned_cols=206 Identities=28% Similarity=0.395 Sum_probs=176.6
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1445)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 45999999999999999999999999999999999999998 999999998875421 2357999999999999999
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
|+||+.+.++..+... .+....++++++.+||++..++.++
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVG----- 123 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchh-----
Confidence 9999998765433110 0012245778999999887776654
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1445)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.++||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999998754 3 4556668889999999999999999999
Q ss_pred EEEecChhHHHH
Q 000523 403 IVYQGPRELVLE 414 (1445)
Q Consensus 403 iv~~G~~~~~~~ 414 (1445)
+++.|+.+++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999988765
No 141
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.8e-36 Score=359.23 Aligned_cols=217 Identities=26% Similarity=0.362 Sum_probs=184.5
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+. ++.+|+|+|+.|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 4 L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i~ 68 (402)
T PRK09536 4 IDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDVE 68 (402)
T ss_pred EEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEcC
Confidence 67788887763 3579999999999999999999999999999999999876 45899999998764
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000523 927 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 927 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1445)
. ..+++.+||++|+..+++.+||+|++.++...... ........++.++++++.+++.+..++. ++.||||
T Consensus 69 ~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~-----~~~LSgG 143 (402)
T PRK09536 69 ALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRP-----VTSLSGG 143 (402)
T ss_pred cCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHH
Confidence 3 34567899999999998999999999886432110 0111233456689999999999888776 4579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
||||+.|||+|+++|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 144 erQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~G 221 (402)
T PRK09536 144 ERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAAG 221 (402)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 999999999999999999999999999999999999999999877899999999987 57889999999985 7999999
Q ss_pred CCC
Q 000523 1083 PLG 1085 (1445)
Q Consensus 1083 ~~~ 1085 (1445)
+..
T Consensus 222 ~~~ 224 (402)
T PRK09536 222 PPA 224 (402)
T ss_pred CHH
Confidence 863
No 142
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=4.4e-36 Score=354.60 Aligned_cols=202 Identities=25% Similarity=0.304 Sum_probs=177.9
Q ss_pred ceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcc---cc----cceEEEeccCCCC
Q 000523 871 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---TF----ARISGYCEQNDIH 943 (1445)
Q Consensus 871 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~gyv~Q~d~~ 943 (1445)
.+.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... .+ ++.+|||+|+..+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 4569999999999999999999999999999999999876 4689999999886532 22 5689999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000523 944 SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1023 (1445)
Q Consensus 944 ~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLD 1023 (1445)
+|.+||+||+.|...+. ..+.+++++++.++++.++|.+..+.. +..|||||||||+|||||+.+|+||+||
T Consensus 83 ~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~-----p~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 83 FPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRY-----PDELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999976543 234555667789999999998877776 3579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1024 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1024 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
|||++||+.++..+++.++++.++ |+|||++||++. ++...+|++++|++ |+++..|+.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~ 214 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTP 214 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCH
Confidence 999999999999999999998754 899999999986 57889999999985 799999985
No 143
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-36 Score=359.24 Aligned_cols=255 Identities=27% Similarity=0.398 Sum_probs=194.4
Q ss_pred HhhHHHHHHhhhccccchHHHHHHHHHHHhh-cCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 79 QERQRLIDKLVKVTDVDNERFLLKLKNRIDR-VGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
+...+..|++....+.+++. .+.-.+ .-...|.++++.+||++.++.
T Consensus 285 ~~g~aa~d~i~~~l~~~~~~-----~~~~~~~~~~~~~~~ei~~~~l~~~y~~--------------------------- 332 (559)
T COG4988 285 AAGEAAADKLFTLLESPVAT-----PGSGEKAEVANEPPIEISLENLSFRYPD--------------------------- 332 (559)
T ss_pred hhhhhHHHHHHHHhcCCCCC-----CCCccccccccCCCceeeecceEEecCC---------------------------
Confidence 34456666666666665541 111111 112346789999999999753
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1445)
.+++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||.+.++..+ +++++||+|+
T Consensus 333 ------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~ 403 (559)
T COG4988 333 ------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQN 403 (559)
T ss_pred ------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCC
Confidence 114899999999999999999999999999999999999998 9999999999887764 5899999998
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
+.++ ..|+|||+.++.. ....+.+.++.++. .+.+.+.-+++.||
T Consensus 404 p~lf-~gTireNi~l~~~----~~s~e~i~~al~~a------------------------------~l~~~v~~p~GLdt 448 (559)
T COG4988 404 PYLF-AGTIRENILLARP----DASDEEIIAALDQA------------------------------GLLEFVPKPDGLDT 448 (559)
T ss_pred Cccc-cccHHHHhhccCC----cCCHHHHHHHHHHh------------------------------cHHHhhcCCCcccc
Confidence 7554 5699999998742 11112222211111 11222233667899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.+|+.+ ++|||||+|||++||||+.+++++++||||++||.+|+..|.+.|.++++ ++|+++ ++| +.+...-+|+
T Consensus 449 ~ige~G-~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~-itH-rl~~~~~~D~ 523 (559)
T COG4988 449 VIGEGG-AGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLV-ITH-RLEDAADADR 523 (559)
T ss_pred hhccCC-CCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEE-EEc-ChHHHhcCCE
Confidence 999765 57999999999999999999999999999999999999999999998764 355555 444 3566777999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|+++++|.++++.+
T Consensus 524 I~vld~G~l~~~g~~~~L~~ 543 (559)
T COG4988 524 IVVLDNGRLVEQGTHEELSE 543 (559)
T ss_pred EEEecCCceeccCCHHHHhh
Confidence 99999999999999999854
No 144
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.2e-37 Score=355.43 Aligned_cols=257 Identities=22% Similarity=0.322 Sum_probs=197.1
Q ss_pred ChHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhh
Q 000523 77 GLQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1445)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1445)
..++...+..|+-++.++++|. + .+.-..+.+...++++||+++++.
T Consensus 302 ~lgq~~~Sa~Rl~~i~~q~~e~-----~--~~~~~~~~~~~~l~~~~vsF~y~~-------------------------- 348 (573)
T COG4987 302 HLGQVIASARRLNDILDQKPEV-----T--FPDEQTATTGQALELRNVSFTYPG-------------------------- 348 (573)
T ss_pred HhhHHHHHHHHHhhhccCCccc-----C--CCccccCCccceeeeccceeecCC--------------------------
Confidence 3566778888888888888772 1 111112222226999999999864
Q ss_pred hcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcC
Q 000523 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1445)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1445)
++.++|+|+|+++++||.+||+|+||||||||+++|+|-++|+ +|+|+.||.++.+... ++.+++++|
T Consensus 349 ------~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Q 419 (573)
T COG4987 349 ------QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQ 419 (573)
T ss_pred ------CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhcc
Confidence 1234999999999999999999999999999999999999999 9999999999877765 468999999
Q ss_pred CCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccc
Q 000523 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1445)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1445)
. .|++..|+|+||.++.. ....+.+.++.++ .+ .++. ..+.+++.|
T Consensus 420 r-~hlF~~Tlr~NL~lA~~----~AsDEel~~aL~q---------------------vg------L~~l--~~~~p~gl~ 465 (573)
T COG4987 420 R-VHLFSGTLRDNLRLANP----DASDEELWAALQQ---------------------VG------LEKL--LESAPDGLN 465 (573)
T ss_pred c-hHHHHHHHHHHHhhcCC----CCCHHHHHHHHHH---------------------cC------HHHH--HHhChhhhh
Confidence 4 67778899999987641 1121211111110 00 0111 123456788
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcC
Q 000523 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1445)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1445)
|.+|+.+. +||||||||++|||+|++++++++|||||.|||+.|+.++++.|.+-+ .++|+++ ++|+... .+.||
T Consensus 466 t~lge~G~-~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~--~~kTll~-vTHrL~~-le~~d 540 (573)
T COG4987 466 TWLGEGGR-RLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA--EGKTLLM-VTHRLRG-LERMD 540 (573)
T ss_pred chhccCCC-cCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh--cCCeEEE-Eeccccc-HhhcC
Confidence 99997654 699999999999999999999999999999999999999999998643 4555555 5666554 45689
Q ss_pred eEEEecCCeEEEecChhHHHH
Q 000523 394 DIILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1445)
+|++|++|+++++|++.++++
T Consensus 541 rIivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 541 RIIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred EEEEEECCeeeecCCHHhhhc
Confidence 999999999999999999875
No 145
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-36 Score=337.96 Aligned_cols=209 Identities=30% Similarity=0.421 Sum_probs=171.7
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 16 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 92 (239)
T cd03296 16 VALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTVF 92 (239)
T ss_pred EeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCHH
Confidence 4999999999999999999999999999999999999998 9999999988754432 35799999998888899999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.++....+...+ + + ..+....++.+++.+||++..++.+ ..|
T Consensus 93 e~l~~~~~~~~~~~~-----------------~--~-----------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 137 (239)
T cd03296 93 DNVAFGLRVKPRSER-----------------P--P-----------EAEIRAKVHELLKLVQLDWLADRYP-----AQL 137 (239)
T ss_pred HHHhhhhhhcccccc-----------------C--C-----------HHHHHHHHHHHHHHcCChhhhhcCh-----hhC
Confidence 999986533211000 0 0 0001123567788999976666544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1445)
||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.... +.+|+.++|+..++.+.+|++++|++|+++
T Consensus 138 S~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tvii~sH~~~~~~~~~d~i~~l~~G~i~ 216 (239)
T cd03296 138 SGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDEL-HVTTVFVTHDQEEALEVADRVVVMNKGRIE 216 (239)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCeEE
Confidence 9999999999999999999999999999999999999999999876532 445555778888899999999999999999
Q ss_pred EecChhHHH
Q 000523 405 YQGPRELVL 413 (1445)
Q Consensus 405 ~~G~~~~~~ 413 (1445)
+.|+.+++.
T Consensus 217 ~~~~~~~~~ 225 (239)
T cd03296 217 QVGTPDEVY 225 (239)
T ss_pred EecCHHHHh
Confidence 999988763
No 146
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=6.1e-36 Score=349.17 Aligned_cols=212 Identities=23% Similarity=0.364 Sum_probs=183.5
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|++.++. ++.+|+|+|+++++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 56778877663 2469999999999999999999999999999999999876 46899999998764
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000523 927 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 927 ~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1445)
. ...++.+||++|++.+++.+||.|++.+.+.++. ...++..+.++++++.++|.+..+..+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 3 2345679999999999999999999998776542 223444556889999999998887764 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
||++||+||+++|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999864 799999999986 68889999999985 899999986
No 147
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.6e-36 Score=332.45 Aligned_cols=206 Identities=30% Similarity=0.397 Sum_probs=174.5
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccc
Confidence 4667766652 2469999999999999999999999999999999999875 458999999987543
Q ss_pred -ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000523 928 -ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1006 (1445)
Q Consensus 928 -~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1006 (1445)
...++.++|++|++.+++..||+|++.+....+. . .++.++++++.+++.+..+.. +..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKK-----VKGFSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhh-----HhhCCHHHHHH
Confidence 2335679999999988889999999988654321 1 134478899999998877665 35799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1007 l~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998877899999999986 47778999999985 7888765
No 148
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=5.1e-36 Score=336.75 Aligned_cols=213 Identities=23% Similarity=0.282 Sum_probs=176.5
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCC-----CCCeEEEEEEEcC
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK-----TGGYITGNITISG 922 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~-----~~~~~~G~i~i~g 922 (1445)
+++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|.. . +.+|+|.++|
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g 66 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDG 66 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECC
Confidence 4667766652 236999999999999999999999999999999999986 4 4689999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.+... ..+++.++|++|++.++ .+||+||+.+....+.. ......++.++++++.+++.+..+.... +.
T Consensus 67 ~~~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~ 140 (227)
T cd03260 67 KDIYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHGI--KLKEELDERVEEALRKAALWDEVKDRLH---AL 140 (227)
T ss_pred EEhhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCChHHhccCC---cc
Confidence 87542 23456799999998877 79999999886544321 1122234567889999999876655421 25
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|+++ .+.+.+|++++|++ |+
T Consensus 141 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 217 (227)
T cd03260 141 GLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GR 217 (227)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CE
Confidence 79999999999999999999999999999999999999999999999876 99999999986 57788999999985 79
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
+++.|+.
T Consensus 218 i~~~g~~ 224 (227)
T cd03260 218 LVEFGPT 224 (227)
T ss_pred EEEecCc
Confidence 9999875
No 149
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=8.7e-36 Score=334.48 Aligned_cols=221 Identities=35% Similarity=0.603 Sum_probs=180.5
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCC-CCeEEEEEEEcCccC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-GGYITGNITISGYPK 925 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~-~~~~~G~i~i~g~~~ 925 (1445)
+.|+|+++.+... +..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNW---------NKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecC---------ccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 4577777776321 013579999999999999999999999999999999999764 123589999999876
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHH-HHHHcCCcccccccccCCCCCcCCHHHH
Q 000523 926 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDE-VMELVELNPLRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 926 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~-~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1445)
.....++.++|++|++.+++.+||+||+.+................+.+++ .++.+++.+..+.. ++.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 544556789999999999999999999998765433222122222334555 88889988776654 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+.|.|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998777899999999985468899999999986 7888765
No 150
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=7.3e-36 Score=349.05 Aligned_cols=205 Identities=28% Similarity=0.405 Sum_probs=173.6
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 18 ~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 94 (303)
T TIGR01288 18 VVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFTV 94 (303)
T ss_pred EEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCcH
Confidence 4999999999999999999999999999999999999998 999999998874322 24679999999888899999
Q ss_pred HHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccccc
Q 000523 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1445)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1445)
+||+.+..+..+... .+....++.+++.+||++..++.++ .
T Consensus 95 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~l~~~~~~~~~-----~ 135 (303)
T TIGR01288 95 RENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADVRVA-----L 135 (303)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCchh-----h
Confidence 999987543322100 0011234567889999887776654 5
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000523 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1445)
Q Consensus 324 LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1445)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.++||+|++|++|++
T Consensus 136 LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~til~~sH~~~~~~~~~d~i~~l~~G~i 213 (303)
T TIGR01288 136 LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLESGRK 213 (303)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 3 45566688889999999999999999999
Q ss_pred EEecChhHHHH
Q 000523 404 VYQGPRELVLE 414 (1445)
Q Consensus 404 v~~G~~~~~~~ 414 (1445)
++.|+.+++.+
T Consensus 214 ~~~g~~~~~~~ 224 (303)
T TIGR01288 214 IAEGRPHALID 224 (303)
T ss_pred EEEcCHHHHHh
Confidence 99999988754
No 151
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.2e-36 Score=392.20 Aligned_cols=253 Identities=24% Similarity=0.330 Sum_probs=195.0
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.++.+..++|+.++++.++|. .. +....+....+++|+||++.++.
T Consensus 418 ~~~~~~~~~ri~~~l~~~~e~-----~~--~~~~~~~~~~~I~~~nvsf~Y~~--------------------------- 463 (686)
T TIGR03797 418 ILAVIPLWERAKPILEALPEV-----DE--AKTDPGKLSGAIEVDRVTFRYRP--------------------------- 463 (686)
T ss_pred HHHHHHHHHHHHHHhcCCccc-----cc--CcCCCCCCCceEEEEEEEEEcCC---------------------------
Confidence 567788888888887765541 00 00001112347999999999842
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1445)
...++|+|+|++|+|||.++|+||||||||||+|+|+|+++|+ +|+|.+||+++++..+ ++.++||+|+
T Consensus 464 -----~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~ 535 (686)
T TIGR03797 464 -----DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQN 535 (686)
T ss_pred -----CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccC
Confidence 1134899999999999999999999999999999999999998 9999999999987765 4789999997
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
+.+| +.|++|||.++.. ...+.+.++++. .++ ++. .-.++++.||
T Consensus 536 ~~lf-~gTI~eNi~~~~~-----~~~e~i~~al~~---a~l------------------------~~~--i~~lp~G~dt 580 (686)
T TIGR03797 536 GRLM-SGSIFENIAGGAP-----LTLDEAWEAARM---AGL------------------------AED--IRAMPMGMHT 580 (686)
T ss_pred CccC-cccHHHHHhcCCC-----CCHHHHHHHHHH---cCc------------------------HHH--HHhccccccc
Confidence 7655 5699999998632 111222222211 110 111 2246778899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.+|+.+ .+||||||||++|||||+++|++|+||||||+||+.++.++.+.|++. ++|+|+ ++|.. ++.+.+|+
T Consensus 581 ~ige~G-~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~Ii-ItHr~-~~i~~~D~ 653 (686)
T TIGR03797 581 VISEGG-GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIV-IAHRL-STIRNADR 653 (686)
T ss_pred cccCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEE-EecCh-HHHHcCCE
Confidence 999876 469999999999999999999999999999999999999999999873 345555 55543 66678999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|+++++|+++++++
T Consensus 654 Iivl~~G~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 654 IYVLDAGRVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCEEEEECCHHHHHh
Confidence 99999999999999999864
No 152
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-36 Score=346.93 Aligned_cols=218 Identities=24% Similarity=0.356 Sum_probs=175.3
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-------CccceEEEEcCCCC-
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDN- 236 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~- 236 (1445)
.++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 34999999999999999999999999999999999999998 99999999987531 11357999999852
Q ss_pred CCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc-cccccc
Q 000523 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1445)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1445)
.+...||+||+.|+.+..+... .+....++++++.+||+ +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVSE----------------------------------EDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCChhhhhCC
Confidence 4446799999998754322100 01123467789999996 445544
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|+.++|+..++.+.||+|
T Consensus 143 -----~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~-~~g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 -----PFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHK-EKGLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEE
Confidence 456999999999999999999999999999999999999999999998765 33456666888999999999999
Q ss_pred EEecCCeEEEecChhHHHH---HHHhcCCCCCC
Q 000523 396 ILLSDGQIVYQGPRELVLE---FFASMGFRCPK 425 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~---~f~~lG~~cp~ 425 (1445)
++|++|+++++|+.+++.+ .+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 9999999999999888742 23344444443
No 153
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-36 Score=336.77 Aligned_cols=217 Identities=24% Similarity=0.314 Sum_probs=180.8
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.++.. .+.+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 4567777765310 011369999999999999999999999999999999999876 45899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000523 927 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1000 (1445)
Q Consensus 927 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1445)
.. ..++.++|++|++.+++.+|+.|++.+....+. .......+.++++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAY-----PAQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcC-----hhhCC
Confidence 31 235679999999999999999999988654332 23334455688999999998777665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEE
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1079 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~ 1079 (1445)
||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999998765 899999999986 57788999999985 7999
Q ss_pred EEcCC
Q 000523 1080 YVGPL 1084 (1445)
Q Consensus 1080 y~G~~ 1084 (1445)
+.|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 98874
No 154
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=7.7e-36 Score=337.36 Aligned_cols=214 Identities=27% Similarity=0.394 Sum_probs=173.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~ 90 (236)
T cd03219 14 VALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPEL 90 (236)
T ss_pred EEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 24599999999999999
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+||+.++....+.. . ..+. . ... ...+....++++++.+||++..++.+
T Consensus 91 tv~~~l~~~~~~~~~~-~------~~~~---~---~~~-----------~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (236)
T cd03219 91 TVLENVMVAAQARTGS-G------LLLA---R---ARR-----------EEREARERAEELLERVGLADLADRPA----- 141 (236)
T ss_pred CHHHHHHHHHhhcccc-c------cccc---c---ccc-----------cHHHHHHHHHHHHHHcCccchhhCCh-----
Confidence 9999999875432100 0 0000 0 000 00111234677889999987666544
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
+.|||||||||+||++|+.+|++++|||||+|||..++..+.+.|+++.. . +.+|+.++|+..++.+.+|++++|++|
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~~G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-R-GITVLLVEHDMDVVMSLADRVTVLDQG 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEeCC
Confidence 46999999999999999999999999999999999999999999998764 3 445666788888999999999999999
Q ss_pred eEEEecChhHHH
Q 000523 402 QIVYQGPRELVL 413 (1445)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1445)
++++.|+++++.
T Consensus 220 ~i~~~~~~~~~~ 231 (236)
T cd03219 220 RVIAEGTPDEVR 231 (236)
T ss_pred EEEeecCHHHhc
Confidence 999999988763
No 155
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-36 Score=336.27 Aligned_cols=205 Identities=30% Similarity=0.412 Sum_probs=172.1
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 239 (1445)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 5999999999999999999999999999999999999998 9999999998765321 357999999998888
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
.+|++||+.+.....+.. . .+....++++++.+||++..+..+
T Consensus 96 ~~t~~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (233)
T cd03258 96 SRTVFENVALPLEIAGVP-K---------------------------------AEIEERVLELLELVGLEDKADAYP--- 138 (233)
T ss_pred CCcHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCChhhhhcCh---
Confidence 999999998865332110 0 001123567889999987666544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+..++.+++|++++|+
T Consensus 139 --~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~~~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 139 --AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINR-ELGLTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998754 334556667788888899999999999
Q ss_pred CCeEEEecChhHHH
Q 000523 400 DGQIVYQGPRELVL 413 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1445)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987763
No 156
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=6.7e-36 Score=333.69 Aligned_cols=207 Identities=29% Similarity=0.407 Sum_probs=171.6
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
+++|+++.+... ...+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~ 70 (218)
T cd03255 2 ELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISK 70 (218)
T ss_pred eEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhh
Confidence 467777665310 011469999999999999999999999999999999999875 458999999987543
Q ss_pred cc-------ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000523 928 ET-------FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1000 (1445)
Q Consensus 928 ~~-------~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1445)
.. .++.++|++|++.+++.+||+|++.+....+. ......++.++++++.++|.+..+.. ++.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 142 (218)
T cd03255 71 LSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHY-----PSELS 142 (218)
T ss_pred cchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcC-----hhhcC
Confidence 11 24579999999999999999999998765432 22333445688999999998776665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecC
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~g 1075 (1445)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++. + +.+|++++|++|
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~v~~l~~G 216 (218)
T cd03255 143 GGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPEL-A-EYADRIIELRDG 216 (218)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHH-H-hhhcEEEEeeCC
Confidence 9999999999999999999999999999999999999999999976 58999999999863 5 489999999863
No 157
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-36 Score=339.09 Aligned_cols=204 Identities=28% Similarity=0.329 Sum_probs=170.7
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc------ccccceEEEeccCCCCCC
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ------ETFARISGYCEQNDIHSP 945 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~~~~~gyv~Q~d~~~~ 945 (1445)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 469999999999999999999999999999999999875 458999999987542 124567999999998889
Q ss_pred CCCHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEE
Q 000523 946 FVTIYESLLFSAWLRL-----SPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1020 (1445)
Q Consensus 946 ~lTv~E~l~f~~~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~il 1020 (1445)
.+||+|++.+...... .........++.++++++.+++.+..+.. +..||||||||++||++|+.+|+||
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----ADQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999987532110 00111123345678899999998766654 4579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1021 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1021 lLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD-GRIVFDGPP 229 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecCH
Confidence 999999999999999999999999764 899999999987 57779999999985 799999875
No 158
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=345.00 Aligned_cols=223 Identities=27% Similarity=0.375 Sum_probs=179.2
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-------CccceEEEEcCCC-CC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHD-NH 237 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d-~~ 237 (1445)
.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.++... ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 4999999999999999999999999999999999999998 99999999987521 1245799999985 24
Q ss_pred CCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc-ccccccc
Q 000523 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMV 316 (1445)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1445)
+...||.||+.|+.+..+... .+...++.++++.+||. ...+.
T Consensus 97 l~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~-- 140 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIPK----------------------------------EKAEKIAAEKLEMVGLADEFWEK-- 140 (288)
T ss_pred cccchHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhccC--
Confidence 445799999998764332100 01122456778889995 34443
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000523 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1445)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1445)
.++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.++||+|+
T Consensus 141 ---~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 141 ---SPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-S-GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred ---CcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 4557999999999999999999999999999999999999999999998753 3 4556668888899999999999
Q ss_pred EecCCeEEEecChhHHHH---HHHhcCCCCCCCCChhHH
Q 000523 397 LLSDGQIVYQGPRELVLE---FFASMGFRCPKRKGVADF 432 (1445)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~f~~lG~~cp~~~~~adf 432 (1445)
+|++|+++++|+++++.+ .++..|+.+|.....++.
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 254 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQ 254 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHH
Confidence 999999999999998743 345667776654444433
No 159
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.3e-35 Score=336.39 Aligned_cols=214 Identities=22% Similarity=0.334 Sum_probs=180.3
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 45677776653 2469999999999999999999999999999999999865 46899999998764
Q ss_pred c-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 927 Q-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 927 ~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
. ...++.++|++|++..++.+||.|++.+...... .....+.++.+.++++.+++.+..+.. ++.|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHY-----PSELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcC-----hhhcCH
Confidence 2 2335679999999988889999999987642111 123334455688999999998776665 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
|||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999986 57788999999985 799999
Q ss_pred cCC
Q 000523 1082 GPL 1084 (1445)
Q Consensus 1082 G~~ 1084 (1445)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 885
No 160
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=9.4e-36 Score=331.30 Aligned_cols=199 Identities=31% Similarity=0.434 Sum_probs=167.3
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 14 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 14 TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 4899999999999999999999999999999999999998 9999999998754432 35799999998888899999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.++.+..+... .+....++++++.+||++..+..+ +.|
T Consensus 91 ~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 131 (213)
T cd03301 91 DNIAFGLKLRKVPK----------------------------------DEIDERVREVAELLQIEHLLDRKP-----KQL 131 (213)
T ss_pred HHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhCCh-----hhC
Confidence 99988654321100 011124567788999987766555 459
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1445)
|||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.... +.+|+.++|+..++.+++|+|++|++|+++
T Consensus 132 S~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~ 210 (213)
T cd03301 132 SGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRL-GTTTIYVTHDQVEAMTMADRIAVMNDGQIQ 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCeEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876533 445556778888999999999999999999
Q ss_pred Eec
Q 000523 405 YQG 407 (1445)
Q Consensus 405 ~~G 407 (1445)
+.|
T Consensus 211 ~~g 213 (213)
T cd03301 211 QIG 213 (213)
T ss_pred ecC
Confidence 876
No 161
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.8e-36 Score=331.53 Aligned_cols=192 Identities=28% Similarity=0.380 Sum_probs=163.3
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCC-CCCCCCHH
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDI-HSPFVTIY 950 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~-~~~~lTv~ 950 (1445)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+......++.+||++|++. .+...|+.
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 359999999999999999999999999999999999876 468999999987644344567999999974 34467999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000523 951 ESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1030 (1445)
Q Consensus 951 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD 1030 (1445)
||+.+...... . ..+.++++++.++|.+..+.. +..||||||||++|||+|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~~----~---~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKELD----A---GNEQAETVLKDLDLYALKERH-----PLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhcC----c---cHHHHHHHHHHcCCchhcCCC-----chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 99987543221 1 123578899999998877765 35799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEE
Q 000523 1031 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1079 (1445)
Q Consensus 1031 ~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~ 1079 (1445)
+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999777999999999986 47778999999986 6653
No 162
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=333.39 Aligned_cols=217 Identities=24% Similarity=0.327 Sum_probs=179.4
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-+.++|+++.+... ...+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 37788888876411 011469999999999999999999999999999999999875 4689999999876
Q ss_pred Cccc------c-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000523 926 KQET------F-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 998 (1445)
Q Consensus 926 ~~~~------~-~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1445)
.... . ++.++|++|++.+++.+|++||+.+....+ ....++.++.++++++.++|.+..+.. +..
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~ 145 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHR-----PSE 145 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhh
Confidence 4311 2 256999999998889999999998865432 122334456688999999998776665 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 999 LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++. + +.+|++++|++ |+
T Consensus 146 LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~-~-~~~~~~~~l~~-G~ 222 (233)
T PRK11629 146 LSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQL-A-KRMSRQLEMRD-GR 222 (233)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-H-HhhCEEEEEEC-CE
Confidence 999999999999999999999999999999999999999999999875 58999999999863 4 44689999985 79
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
++..|+.
T Consensus 223 i~~~~~~ 229 (233)
T PRK11629 223 LTAELSL 229 (233)
T ss_pred EEEEecc
Confidence 9999886
No 163
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.5e-35 Score=337.94 Aligned_cols=214 Identities=26% Similarity=0.359 Sum_probs=180.2
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 67788877763 2369999999999999999999999999999999999875 45899999998753
Q ss_pred c-----------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000523 927 Q-----------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 995 (1445)
Q Consensus 927 ~-----------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 995 (1445)
. ...++.++|++|++.+++..|+.|++.+...... ....+..++.++++++.++|.+..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 2 1235679999999988889999999987543211 122334455688899999998766654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecC
Q 000523 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1445)
Q Consensus 996 ~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~g 1075 (1445)
++.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.+|++++|++
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 4579999999999999999999999999999999999999999999999877999999999986 57788999999985
Q ss_pred cEEEEEcCC
Q 000523 1076 GQEIYVGPL 1084 (1445)
Q Consensus 1076 G~~~y~G~~ 1084 (1445)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 799999875
No 164
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=6.2e-36 Score=333.43 Aligned_cols=194 Identities=25% Similarity=0.384 Sum_probs=163.2
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 17 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 17 PALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 4999999999999999999999999999999999999998 999999999875432 2357999999988899
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
.+||+||+.++.+..+... .+....++++++.+||++..+..+
T Consensus 94 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 136 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKVGLEGKAHALP--- 136 (216)
T ss_pred cccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 9999999998754322100 001224567889999987666554
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ . +.+|+.++|+..++.++||++++|+
T Consensus 137 --~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~vsH~~~~~~~~~d~i~~l~ 212 (216)
T TIGR00960 137 --MQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-R-GTTVLVATHDINLVETYRHRTLTLS 212 (216)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999998753 3 4556668888889999999999999
Q ss_pred CCeE
Q 000523 400 DGQI 403 (1445)
Q Consensus 400 ~G~i 403 (1445)
+|++
T Consensus 213 ~G~i 216 (216)
T TIGR00960 213 RGRL 216 (216)
T ss_pred CCcC
Confidence 9974
No 165
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.1e-35 Score=332.46 Aligned_cols=213 Identities=24% Similarity=0.387 Sum_probs=178.5
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
.++|+++.+.. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (220)
T cd03263 2 QIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRT 68 (220)
T ss_pred EEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccc
Confidence 46677766531 11469999999999999999999999999999999999875 458999999987643
Q ss_pred --ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000523 928 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1005 (1445)
Q Consensus 928 --~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1445)
..+++.++|++|++.+++..|++||+.+....+. .......+.++++++.++|.+..++. +..|||||||
T Consensus 69 ~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 140 (220)
T cd03263 69 DRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKR-----ARTLSGGMKR 140 (220)
T ss_pred chHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhCh-----hhhCCHHHHH
Confidence 2345679999999988889999999988654432 22333445678999999998776665 3579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1006 Rl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |++++.|+.
T Consensus 141 rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 141 KLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999999875 599999999986 47778999999985 789988875
No 166
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1e-35 Score=331.29 Aligned_cols=206 Identities=25% Similarity=0.341 Sum_probs=173.3
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.+. +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 45677777652 12369999999999999999999999999999999999865 45899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000523 927 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1000 (1445)
Q Consensus 927 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1445)
.. .+++.++|++|++.+++.+|+.|++.+....+. ......++.++++++.+++.+..+.. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAF-----PEQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCC
Confidence 21 245679999999988889999999988754331 22333455688999999998766655 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecC
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~g 1075 (1445)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999986 577789999999864
No 167
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.3e-35 Score=334.77 Aligned_cols=204 Identities=22% Similarity=0.383 Sum_probs=171.3
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (232)
T cd03218 14 KVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKL 90 (232)
T ss_pred EeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCccccccC
Confidence 4999999999999999999999999999999999999998 9999999998754332 24699999999899999
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+||+.+.....+.. . .+....++++++.+||++..++.+
T Consensus 91 tv~~~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 131 (232)
T cd03218 91 TVEENILAVLEIRGLS-K---------------------------------KEREEKLEELLEEFHITHLRKSKA----- 131 (232)
T ss_pred cHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 9999998764322110 0 001124567888999987666544
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
+.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+++|++++|++|
T Consensus 132 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G 209 (232)
T cd03218 132 SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-R-GIGVLITDHNVRETLSITDRAYIIYEG 209 (232)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 3 455666788888999999999999999
Q ss_pred eEEEecChhHHH
Q 000523 402 QIVYQGPRELVL 413 (1445)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1445)
++++.|+.+++.
T Consensus 210 ~i~~~~~~~~~~ 221 (232)
T cd03218 210 KVLAEGTPEEIA 221 (232)
T ss_pred eEEEEeCHHHhh
Confidence 999999987753
No 168
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=343.89 Aligned_cols=218 Identities=22% Similarity=0.307 Sum_probs=180.3
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 67788887764210 011369999999999999999999999999999999999876 45899999998864
Q ss_pred c-----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc--ccccccccCCCCCc
Q 000523 927 Q-----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN--PLRQSLVGLPGVSG 998 (1445)
Q Consensus 927 ~-----~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~--~~~~~~vg~~~~~~ 998 (1445)
. ...++.+||++|++. .+...||+|++.|..... ..+.++..+.++++++.+||. +..+.. ++.
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 3 134568999999863 334579999999865432 234455566789999999996 555554 467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 999 LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.+|++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999986 57788999999986 79
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9999985
No 169
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=331.47 Aligned_cols=200 Identities=30% Similarity=0.404 Sum_probs=167.9
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHH
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 35999999999999999999999999999999999999998 9999999988753 246799999998888889999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.++....+... .+....++.+++.+||++..+..+ ..|
T Consensus 92 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGFENAYP-----HQL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----ccC
Confidence 99988654322100 001123567888999987666544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec--CCe
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~--~G~ 402 (1445)
|||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.... +++|+.++|+..++.+.+|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRET-GKTVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 9999999999999999999999999999999999999999999875433 4455667888888999999999999 799
Q ss_pred EEEecCh
Q 000523 403 IVYQGPR 409 (1445)
Q Consensus 403 iv~~G~~ 409 (1445)
+++.++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9998865
No 170
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.8e-35 Score=345.26 Aligned_cols=204 Identities=27% Similarity=0.396 Sum_probs=175.7
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1445)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 16 ~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~tv 92 (301)
T TIGR03522 16 NALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMYV 92 (301)
T ss_pred EEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCcH
Confidence 4999999999999999999999999999999999999998 999999999875432 23679999999999999999
Q ss_pred HHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccccc
Q 000523 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1445)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1445)
+||+.|.++..+... ++....++++++.+||++..|+.++ .
T Consensus 93 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 133 (301)
T TIGR03522 93 REYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIG-----Q 133 (301)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchh-----h
Confidence 999998765433110 0112245678999999988776654 5
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000523 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1445)
Q Consensus 324 LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1445)
|||||||||+||+||+++|++|+|||||+|||+.++.++.+.|+++. .+ ++|+.++|...++.++||+|++|++|++
T Consensus 134 LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiii~sH~l~~~~~~~d~i~~l~~G~i 210 (301)
T TIGR03522 134 LSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG--KD-KTIILSTHIMQEVEAICDRVIIINKGKI 210 (301)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc--CC-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999873 34 5666688899999999999999999999
Q ss_pred EEecChhHHHH
Q 000523 404 VYQGPRELVLE 414 (1445)
Q Consensus 404 v~~G~~~~~~~ 414 (1445)
++.|+.+++..
T Consensus 211 ~~~g~~~~~~~ 221 (301)
T TIGR03522 211 VADKKLDELSA 221 (301)
T ss_pred EEeCCHHHHHH
Confidence 99999998765
No 171
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=336.11 Aligned_cols=213 Identities=27% Similarity=0.374 Sum_probs=178.6
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
.++|+++.+.. .+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCc
Confidence 45677766531 1359999999999999999999999999999999999875 458999999987542
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCcCCHH
Q 000523 928 ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP--LRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 928 ---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~LSgG 1002 (1445)
...++.++|++|++.+++.+||+||+.+...++. .+.+..++.++++++.+++.+ ..+.. ++.||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHH
Confidence 2345678999999999999999999988654431 233344556889999999985 55554 4679999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999764 899999999986 57788999999985 789998
Q ss_pred cCC
Q 000523 1082 GPL 1084 (1445)
Q Consensus 1082 G~~ 1084 (1445)
|+.
T Consensus 218 ~~~ 220 (242)
T cd03295 218 GTP 220 (242)
T ss_pred cCH
Confidence 875
No 172
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=7e-36 Score=388.06 Aligned_cols=258 Identities=25% Similarity=0.395 Sum_probs=197.7
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.++.+..++|+.++++.++|. .........+....+++|+||++.++.
T Consensus 428 ~~~~~~~~~ri~~il~~~~e~-----~~~~~~~~~~~~~~~I~~~~vsf~Y~~--------------------------- 475 (694)
T TIGR03375 428 YQQAKTALQSLDELMQLPVER-----PEGTRFLHRPRLQGEIEFRNVSFAYPG--------------------------- 475 (694)
T ss_pred HHHHHHHHHHHHHHHcCCCCC-----CCCCCCCCCCCccceEEEEEEEEEeCC---------------------------
Confidence 678888999999888876541 000000011112347999999999842
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1445)
...++|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|+
T Consensus 476 -----~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~ 547 (694)
T TIGR03375 476 -----QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQD 547 (694)
T ss_pred -----CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCC
Confidence 1124899999999999999999999999999999999999998 9999999999887654 5789999997
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
+.+| +.|++|||.++.. ....+.+.++++.. + .++. +-.|++..||
T Consensus 548 ~~lf-~~TI~eNi~~~~~----~~~~~~i~~a~~~~---~------------------------l~~~--i~~lp~gl~T 593 (694)
T TIGR03375 548 PRLF-YGTLRDNIALGAP----YADDEEILRAAELA---G------------------------VTEF--VRRHPDGLDM 593 (694)
T ss_pred hhhh-hhhHHHHHhCCCC----CCCHHHHHHHHHHc---C------------------------hHHH--HHhCcccccc
Confidence 7555 5699999987531 11112222221110 0 1111 2247788899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.+|+.+. .||||||||++||||++++|++++||||||+||+.++..|.+.|++.. .++|+|+ ++|.. ++.+.||+
T Consensus 594 ~i~e~G~-~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~--~~~T~ii-ItHrl-~~~~~~D~ 668 (694)
T TIGR03375 594 QIGERGR-SLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL--AGKTLVL-VTHRT-SLLDLVDR 668 (694)
T ss_pred eecCCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCCEEEE-EecCH-HHHHhCCE
Confidence 9998764 699999999999999999999999999999999999999999998864 3455555 44443 56788999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|+++++|+++++++
T Consensus 669 iivl~~G~i~e~G~~~eLl~ 688 (694)
T TIGR03375 669 IIVMDNGRIVADGPKDQVLE 688 (694)
T ss_pred EEEEeCCEEEeeCCHHHHHH
Confidence 99999999999999999875
No 173
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.4e-35 Score=330.18 Aligned_cols=194 Identities=26% Similarity=0.376 Sum_probs=166.5
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcc------cccceEEEeccCCCCCC
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE------TFARISGYCEQNDIHSP 945 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~Q~d~~~~ 945 (1445)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 369999999999999999999999999999999999865 4589999999875421 24567999999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000523 946 FVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1025 (1445)
Q Consensus 946 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEP 1025 (1445)
.+|+.||+.+....+. ...+..++.++++++.+++.+..+.. +..||||||||++||++|+.+|++++||||
T Consensus 92 ~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 163 (214)
T cd03292 92 DRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRAL-----PAELSGGEQQRVAIARAIVNSPTILIADEP 163 (214)
T ss_pred CCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 9999999988754432 23334455678999999998776665 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 1026 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 1026 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
|+|||+.++..+.+.|+++.++|+|||+++|++. .+.+.+|++++|++ |+
T Consensus 164 t~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 164 TGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred CCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999998777999999999986 46778999999986 44
No 174
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.2e-35 Score=332.55 Aligned_cols=199 Identities=29% Similarity=0.434 Sum_probs=168.1
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcc---c-ccceEEEeccCCCCCCCC
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---T-FARISGYCEQNDIHSPFV 947 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~-~~~~~gyv~Q~d~~~~~l 947 (1445)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 369999999999999999999999999999999999876 4589999999875431 1 245699999999999999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000523 948 TIYESLLFSAWLRLSPEVDSETRKMFIDEVMELV-ELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1026 (1445)
Q Consensus 948 Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPT 1026 (1445)
|++||+.+...... ....++.+.++++.+ ++.+..+.. +..||||||||++|||+|+.+|++|+|||||
T Consensus 91 t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt 160 (222)
T cd03224 91 TVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGGEQQMLAIARALMSRPKLLLLDEPS 160 (222)
T ss_pred cHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 99999988654321 122334466778877 466555554 4579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1027 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1027 sgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
+|||+.++..+++.|+++++.|+|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 161 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (222)
T cd03224 161 EGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEGTA 216 (222)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeCCH
Confidence 999999999999999999877899999999986 57788999999985 799998875
No 175
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-35 Score=340.78 Aligned_cols=204 Identities=23% Similarity=0.335 Sum_probs=169.8
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCC-CCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHD-NHIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~l 241 (1445)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++ ..++.+
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (279)
T PRK13650 21 YTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGA 97 (279)
T ss_pred eeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccc
Confidence 4899999999999999999999999999999999999998 9999999998865332 35799999986 367788
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+||+.|+.+..+... .+....++++++.+||++..+..+
T Consensus 98 tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~----- 138 (279)
T PRK13650 98 TVEDDVAFGLENKGIPH----------------------------------EEMKERVNEALELVGMQDFKEREP----- 138 (279)
T ss_pred cHHHHHHhhHHhCCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc-----
Confidence 99999998754322100 011234577899999987666544
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++ ..+|+|++|++|
T Consensus 139 ~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~-g~tilivtH~~~~~-~~~dri~~l~~G 216 (279)
T PRK13650 139 ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDY-QMTVISITHDLDEV-ALSDRVLVMKNG 216 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999886533 45555567777777 579999999999
Q ss_pred eEEEecChhHHH
Q 000523 402 QIVYQGPRELVL 413 (1445)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1445)
+++..|+++++.
T Consensus 217 ~i~~~g~~~~~~ 228 (279)
T PRK13650 217 QVESTSTPRELF 228 (279)
T ss_pred EEEEECCHHHHH
Confidence 999999998765
No 176
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.5e-36 Score=316.56 Aligned_cols=213 Identities=26% Similarity=0.392 Sum_probs=177.5
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|++..| ++.++|++||+++++||+++|+|+|||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~--~~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVR--PRSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeeEEECCeecC
Confidence 5667776555 34689999999999999999999999999999999999876 34899999999876
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCcCCH
Q 000523 927 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELV-ELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 927 ~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LSg 1001 (1445)
.. ..++-++||||....||.+||+|||..++..+.. ++..+..++++.+.+ .|.+.++...| .|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCCh
Confidence 42 3456699999999999999999999988765432 111122256777766 35556666543 6999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
||||.++|||||+++|++|+|||||.||-|.-..+|.++|+++.++ |.||+++-++.. ...+..||.++|.+ |++++
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~ 217 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVL 217 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 779999988876 47789999999985 89999
Q ss_pred EcCCC
Q 000523 1081 VGPLG 1085 (1445)
Q Consensus 1081 ~G~~~ 1085 (1445)
.|+..
T Consensus 218 ~G~~~ 222 (237)
T COG0410 218 SGTAA 222 (237)
T ss_pred ecCHH
Confidence 99963
No 177
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.1e-36 Score=313.11 Aligned_cols=211 Identities=22% Similarity=0.370 Sum_probs=180.9
Q ss_pred cccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCcc----ceEEEEcCCCCC
Q 000523 162 KRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ----RTAAYISQHDNH 237 (1445)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~----~~~~yv~Q~d~~ 237 (1445)
.+++++++|||+.+++||+++++|||||||||.+.++.|+.+|+ +|+|.+||.+++.+... .-+||+||++..
T Consensus 14 y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SI 90 (243)
T COG1137 14 YKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASI 90 (243)
T ss_pred hCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchH
Confidence 34567999999999999999999999999999999999999999 99999999999887653 358999999999
Q ss_pred CCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccc
Q 000523 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1445)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1445)
|-.+||+|||.-..+.+.... ...+.+.+.+.+|+.+.|.+++|..-.
T Consensus 91 Fr~LtV~dNi~~vlE~~~~d~--------------------------------~~~~~~~~l~~LL~ef~i~hlr~~~a~ 138 (243)
T COG1137 91 FRKLTVEDNIMAVLEIREKDL--------------------------------KKAERKEELDALLEEFHITHLRDSKAY 138 (243)
T ss_pred hhcCcHHHHHHHHHhhhhcch--------------------------------hHHHHHHHHHHHHHHhchHHHhcCccc
Confidence 999999999987654332100 001123356789999999999886533
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000523 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1445)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1445)
.||||||+|+-|||||+.+|+.++||||++|+||-+..+|.+.++.+.. .+.-|+.+-|.-.|+...|||.++
T Consensus 139 -----sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~--rgiGvLITDHNVREtL~i~dRaYI 211 (243)
T COG1137 139 -----SLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD--RGIGVLITDHNVRETLDICDRAYI 211 (243)
T ss_pred -----ccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh--CCceEEEccccHHHHHhhhheEEE
Confidence 5999999999999999999999999999999999999999999998764 344455577888999999999999
Q ss_pred ecCCeEEEecChhHHHH
Q 000523 398 LSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 398 L~~G~iv~~G~~~~~~~ 414 (1445)
+++|++..+|+++++.+
T Consensus 212 i~~G~vla~G~p~ei~~ 228 (243)
T COG1137 212 ISDGKVLAEGSPEEIVN 228 (243)
T ss_pred EecCeEEecCCHHHHhc
Confidence 99999999999998864
No 178
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-35 Score=339.93 Aligned_cols=202 Identities=25% Similarity=0.307 Sum_probs=172.9
Q ss_pred ceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcc---c----ccceEEEeccCCCC
Q 000523 871 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---T----FARISGYCEQNDIH 943 (1445)
Q Consensus 871 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~d~~ 943 (1445)
.+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.+
T Consensus 36 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~--p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 113 (269)
T cd03294 36 QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIE--PTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFAL 113 (269)
T ss_pred CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccChhhhhhhhcCcEEEEecCccc
Confidence 4579999999999999999999999999999999999876 4589999999875421 1 13569999999999
Q ss_pred CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000523 944 SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1023 (1445)
Q Consensus 944 ~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLD 1023 (1445)
++.+||+|++.+...... ......++.++++++.++|.+..+..+ ..||||||||++||++|+.+|+||+||
T Consensus 114 ~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illLD 185 (269)
T cd03294 114 LPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLMD 185 (269)
T ss_pred CCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 989999999988654321 223344456889999999988777764 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1024 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1024 EPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
|||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 186 EPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 186 EAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999998754 899999999986 57788999999985 799998875
No 179
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.9e-35 Score=338.50 Aligned_cols=215 Identities=19% Similarity=0.290 Sum_probs=181.0
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-+.++|+++.+. ++.+|+|||++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 478889987763 2469999999999999999999999999999999999875 4589999999875
Q ss_pred Ccc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000523 926 KQE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 999 (1445)
Q Consensus 926 ~~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 999 (1445)
... ..++.++|++|+..+++.+||.||+.+...... ..+....++.+.++++.+++.+..+.. +..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLM-----PSEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCC-----hhhC
Confidence 421 134569999999988899999999987643221 122333445678899999998877765 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEE
Q 000523 1000 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1078 (1445)
Q Consensus 1000 SgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~ 1078 (1445)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999986 57788999999985 799
Q ss_pred EEEcCC
Q 000523 1079 IYVGPL 1084 (1445)
Q Consensus 1079 ~y~G~~ 1084 (1445)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 999885
No 180
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=9.9e-36 Score=338.00 Aligned_cols=217 Identities=24% Similarity=0.281 Sum_probs=177.0
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+. .++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhh
Confidence 45677766552 02359999999999999999999999999999999999875 45899999998754
Q ss_pred c------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000523 927 Q------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRL-----SPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 995 (1445)
Q Consensus 927 ~------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 995 (1445)
. ..+++.++|++|++.+++.+||+||+.+...... .........+++++++++.+++.+..+..
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 142 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR----- 142 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----
Confidence 2 1245679999999988999999999976421100 00011223345678899999998766654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEec
Q 000523 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 996 ~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ .+.+.+|++++|++
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 143 ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 4579999999999999999999999999999999999999999999998764 899999999986 47788999999985
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|++++.|+.
T Consensus 222 -G~i~~~~~~ 230 (243)
T TIGR02315 222 -GEIVFDGAP 230 (243)
T ss_pred -CEEEecCCH
Confidence 789988875
No 181
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=340.39 Aligned_cols=215 Identities=25% Similarity=0.340 Sum_probs=180.5
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-++++|+++.++ ++..+|+|+|++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 69 (274)
T PRK13647 4 IIEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREV 69 (274)
T ss_pred eEEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 367888887763 12359999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 926 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 926 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
.. ...++.+||++|++. .++..||.|++.|..... .......++.++++++.++|.+..+.. +..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LSg 141 (274)
T PRK13647 70 NAENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKP-----PYHLSY 141 (274)
T ss_pred CCCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCC-----hhhCCH
Confidence 43 223567999999863 445689999998864322 233344455688999999998877766 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ .+.+.+|++++|++ |++++.
T Consensus 142 G~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~ 219 (274)
T PRK13647 142 GQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAE 219 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 46788999999985 799999
Q ss_pred cCC
Q 000523 1082 GPL 1084 (1445)
Q Consensus 1082 G~~ 1084 (1445)
|+.
T Consensus 220 g~~ 222 (274)
T PRK13647 220 GDK 222 (274)
T ss_pred CCH
Confidence 985
No 182
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-35 Score=335.59 Aligned_cols=212 Identities=27% Similarity=0.368 Sum_probs=178.4
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 45677776652 2469999999999999999999999999999999999875 45899999998764
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000523 927 QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1006 (1445)
Q Consensus 927 ~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1006 (1445)
. ..+.+||++|++.+++.+||.|++.+....+. ....+.++.++++++.++|.+..+.. +..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLAG---VEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHH
Confidence 3 23458999999988888999999987654321 23334455688999999998776654 35799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEec-CcEEEEEcCC
Q 000523 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGQEIYVGPL 1084 (1445)
Q Consensus 1007 l~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~-gG~~~y~G~~ 1084 (1445)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|++. ++.+.+|++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999987 57888999999985 5899888765
No 183
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.5e-35 Score=331.34 Aligned_cols=203 Identities=31% Similarity=0.434 Sum_probs=170.7
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1445)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 35999999999999999999999999999999999999998 999999999875421 2356999999988888999
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
|+||+.+..+..+... .+....++++++.+||++..++.++
T Consensus 92 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 132 (220)
T cd03263 92 VREHLRFYARLKGLPK----------------------------------SEIKEEVELLLRVLGLTDKANKRAR----- 132 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhChhh-----
Confidence 9999988654332100 0011235677889999877766554
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1445)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. + .+|+.++|+..++.+.+|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 5999999999999999999999999999999999999999999998743 3 566667888888889999999999999
Q ss_pred EEEecChhHH
Q 000523 403 IVYQGPRELV 412 (1445)
Q Consensus 403 iv~~G~~~~~ 412 (1445)
+++.|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 184
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.7e-35 Score=331.43 Aligned_cols=202 Identities=25% Similarity=0.416 Sum_probs=167.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 14 QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 4899999999999999999999999999999999999998 9999999988765432 35699999999899999
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHc-CCcccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLDVCADTMVGDEM 320 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~~ 320 (1445)
||+||+.++....+ .. + ....++.+++.+ ++++..++.+
T Consensus 91 t~~~~l~~~~~~~~--~~-----~-----------------------------~~~~~~~~l~~~~~l~~~~~~~~---- 130 (222)
T cd03224 91 TVEENLLLGAYARR--RA-----K-----------------------------RKARLERVYELFPRLKERRKQLA---- 130 (222)
T ss_pred cHHHHHHHHhhhcC--ch-----h-----------------------------HHHHHHHHHHHHHhhhhhhhCch----
Confidence 99999988653221 00 0 011233455566 4655555443
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000523 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1445)
Q Consensus 321 ~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1445)
+.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+.+|++++|++
T Consensus 131 -~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~ 207 (222)
T cd03224 131 -GTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-E-GVTILLVEQNARFALEIADRAYVLER 207 (222)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhccEEEEeeC
Confidence 46999999999999999999999999999999999999999999998754 3 45566678888889999999999999
Q ss_pred CeEEEecChhHHH
Q 000523 401 GQIVYQGPRELVL 413 (1445)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1445)
|++++.|+.+++.
T Consensus 208 G~i~~~~~~~~~~ 220 (222)
T cd03224 208 GRVVLEGTAAELL 220 (222)
T ss_pred CeEEEeCCHHHHh
Confidence 9999999987653
No 185
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-35 Score=335.16 Aligned_cols=213 Identities=30% Similarity=0.416 Sum_probs=171.6
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 15 KALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred EEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 4999999999999999999999999999999999999998 999999999876543 1357999999988889
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
.+||+||+.++..... . ..... .+. . .......++.+++.+||++..++.
T Consensus 92 ~~tv~~~l~~~~~~~~--~---~~~~~------~~~-~--------------~~~~~~~~~~~l~~~~l~~~~~~~---- 141 (241)
T cd03256 92 RLSVLENVLSGRLGRR--S---TWRSL------FGL-F--------------PKEEKQRALAALERVGLLDKAYQR---- 141 (241)
T ss_pred cCcHHHHHHhhhcccc--h---hhhhh------ccc-C--------------cHHHHHHHHHHHHHcCChhhhCCC----
Confidence 9999999987542110 0 00000 000 0 001123456788899997665544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.... +.+|+.++|+..++.+++|++++|+
T Consensus 142 -~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~tH~~~~~~~~~d~v~~l~ 219 (241)
T cd03256 142 -ADQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREE-GITVIVSLHQVDLAREYADRIVGLK 219 (241)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 44699999999999999999999999999999999999999999999876433 4556667888889999999999999
Q ss_pred CCeEEEecChhHHH
Q 000523 400 DGQIVYQGPRELVL 413 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1445)
+|++++.|+++++.
T Consensus 220 ~G~i~~~~~~~~~~ 233 (241)
T cd03256 220 DGRIVFDGPPAELT 233 (241)
T ss_pred CCEEEeecCHHHhh
Confidence 99999999988763
No 186
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3e-35 Score=338.44 Aligned_cols=206 Identities=21% Similarity=0.357 Sum_probs=171.6
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 239 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|+..+++
T Consensus 21 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 97 (269)
T PRK11831 21 CIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFT 97 (269)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccCC
Confidence 4899999999999999999999999999999999999998 9999999988754321 356999999988888
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
.+||.||+.++..... ... + .+....++.+++.+||++..+..+
T Consensus 98 ~~tv~enl~~~~~~~~-~~~--------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~--- 141 (269)
T PRK11831 98 DMNVFDNVAYPLREHT-QLP--------A------------------------PLLHSTVMMKLEAVGLRGAAKLMP--- 141 (269)
T ss_pred CCCHHHHHHHHHHHcc-CCC--------H------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 9999999987642210 000 0 001123566788999987777654
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. ..+++|+.++|+..++.+.+|++++|+
T Consensus 142 --~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~g~tiiivsH~~~~~~~~~d~v~~l~ 218 (269)
T PRK11831 142 --SELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNS-ALGVTCVVVSHDVPEVLSIADHAYIVA 218 (269)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH-hcCcEEEEEecCHHHHHHhhCEEEEEE
Confidence 46999999999999999999999999999999999999999999998764 334556667888899999999999999
Q ss_pred CCeEEEecChhHHH
Q 000523 400 DGQIVYQGPRELVL 413 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1445)
+|++++.|+++++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (269)
T PRK11831 219 DKKIVAHGSAQALQ 232 (269)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988764
No 187
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=7.4e-36 Score=381.24 Aligned_cols=257 Identities=22% Similarity=0.367 Sum_probs=192.8
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.++.+...+|+.+..+.+++. ..+....+.+..+|+++||++.++.
T Consensus 308 ~~~~~~~~~ri~~~~~~~~~~-------~~~~~~~~~~~~~i~~~~vsf~y~~--------------------------- 353 (582)
T PRK11176 308 FQRGMAACQTLFAILDLEQEK-------DEGKRVIERAKGDIEFRNVTFTYPG--------------------------- 353 (582)
T ss_pred HHHHHHHHHHHHHHhcCCCcC-------CCCCcCCCCCCCeEEEEEEEEecCC---------------------------
Confidence 345666777777766544330 0011111222346999999998742
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1445)
...++|+|+|++++|||.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 354 -----~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~ 425 (582)
T PRK11176 354 -----KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQN 425 (582)
T ss_pred -----CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccC
Confidence 1124999999999999999999999999999999999999998 9999999999877654 4789999998
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
+.+| +.|++|||.++..- ....+.+.++++.. + .++.+ -.|+++.||
T Consensus 426 ~~lf-~~Ti~~Ni~~~~~~---~~~~~~i~~al~~~---~------------------------l~~~i--~~lp~Gldt 472 (582)
T PRK11176 426 VHLF-NDTIANNIAYARTE---QYSREQIEEAARMA---Y------------------------AMDFI--NKMDNGLDT 472 (582)
T ss_pred ceee-cchHHHHHhcCCCC---CCCHHHHHHHHHHh---C------------------------cHHHH--HhcccccCc
Confidence 7655 47999999875310 01112222221110 0 11112 236788899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.+|+.+ +.||||||||++|||+|+++|++++||||||+||+.++..+.+.|++.. .++|+|+ ++|.. +..+.||+
T Consensus 473 ~ig~~g-~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~~~tvI~-VtHr~-~~~~~~D~ 547 (582)
T PRK11176 473 VIGENG-VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ--KNRTSLV-IAHRL-STIEKADE 547 (582)
T ss_pred eeCCCC-CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-HHHHhCCE
Confidence 999875 4699999999999999999999999999999999999999999998753 3455555 45544 66788999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|+++++|+++++.+
T Consensus 548 Ii~l~~g~i~e~g~~~~l~~ 567 (582)
T PRK11176 548 ILVVEDGEIVERGTHAELLA 567 (582)
T ss_pred EEEEECCEEEEeCCHHHHHh
Confidence 99999999999999998864
No 188
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-35 Score=338.71 Aligned_cols=203 Identities=26% Similarity=0.335 Sum_probs=169.8
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCC-CCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1445)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.+
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 4999999999999999999999999999999999999998 9999999998765432 357999999863 55678
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+||+.|+.+..+.. ..+....++++++.+||.+..+..+
T Consensus 96 tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~~----- 136 (274)
T PRK13647 96 TVWDDVAFGPVNMGLD----------------------------------KDEVERRVEEALKAVRMWDFRDKPP----- 136 (274)
T ss_pred cHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCHHHhcCCh-----
Confidence 9999999865322110 0011224567889999987666554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++.. . +.+|+.++|+..++.+.||+|++|++|
T Consensus 137 ~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 137 YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998764 3 455666888888999999999999999
Q ss_pred eEEEecChhHH
Q 000523 402 QIVYQGPRELV 412 (1445)
Q Consensus 402 ~iv~~G~~~~~ 412 (1445)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998654
No 189
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-35 Score=328.18 Aligned_cols=197 Identities=27% Similarity=0.415 Sum_probs=166.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+|
T Consensus 14 ~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e 89 (210)
T cd03269 14 TALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVID 89 (210)
T ss_pred EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHH
Confidence 4999999999999999999999999999999999999998 9999999988754 23467999999988888999999
Q ss_pred HHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCC
Q 000523 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1445)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1445)
|+.+..+..+... .+....++++++.+||++..++.+ +.||
T Consensus 90 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (210)
T cd03269 90 QLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV-----EELS 130 (210)
T ss_pred HHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----hhCC
Confidence 9988654322100 001124567888999987666544 4699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEE
Q 000523 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1445)
Q Consensus 326 GGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1445)
|||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+|+.++|+..++.+++|++++|++|++++
T Consensus 131 ~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~ 208 (210)
T cd03269 131 KGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-A-GKTVILSTHQMELVEELCDRVLLLNKGRAVL 208 (210)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEECCCHHHHHHhhhEEEEEeCCEEEe
Confidence 9999999999999999999999999999999999999999998754 3 4566668888889999999999999999987
Q ss_pred ec
Q 000523 406 QG 407 (1445)
Q Consensus 406 ~G 407 (1445)
.|
T Consensus 209 ~~ 210 (210)
T cd03269 209 YG 210 (210)
T ss_pred cC
Confidence 65
No 190
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-35 Score=339.64 Aligned_cols=208 Identities=25% Similarity=0.343 Sum_probs=174.5
Q ss_pred ccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCC
Q 000523 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD 235 (1445)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1445)
...++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 4456999999999999999999999999999999999999998 9999999988754322 24699999998
Q ss_pred CCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccc
Q 000523 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1445)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1445)
.+++.+||+||+.+.....+... .+....++++++.+||++..++.
T Consensus 112 ~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 157 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQGVPR----------------------------------AEREERAAEALELVGLEGWEHKY 157 (269)
T ss_pred ccCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCC
Confidence 88889999999988654322100 00112356788999998777765
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
++ .|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+.. +.+|+.++|+..++.+++|++
T Consensus 158 ~~-----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiii~tH~~~~~~~~~d~v 231 (269)
T cd03294 158 PD-----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAEL-QKTIVFITHDLDEALRLGDRI 231 (269)
T ss_pred cc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhcCEE
Confidence 54 599999999999999999999999999999999999999999999876533 445666788888899999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000523 396 ILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1445)
++|++|++++.|+.+++.
T Consensus 232 ~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 232 AIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 191
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-35 Score=342.88 Aligned_cols=218 Identities=26% Similarity=0.300 Sum_probs=179.7
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.+.... .....+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67888988874210 011359999999999999999999999999999999999876 45899999998763
Q ss_pred c-------ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000523 927 Q-------ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 997 (1445)
Q Consensus 927 ~-------~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1445)
. ...++.+|||+|++. .+...||.||+.|+.... ..+.++.++.++++++.++|. +..+.. ++
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 1 234567999999862 233479999999875432 233444456789999999996 555554 46
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999764 899999999987 57888999999985 8
Q ss_pred EEEEEcCC
Q 000523 1077 QEIYVGPL 1084 (1445)
Q Consensus 1077 ~~~y~G~~ 1084 (1445)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999985
No 192
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-35 Score=333.87 Aligned_cols=205 Identities=28% Similarity=0.429 Sum_probs=171.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|
T Consensus 15 ~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 15 KAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred eEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 4999999999999999999999999999999999999998 9999999998764332 357899999998999999
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcc--cccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV--CADTMVGDEM 320 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~~ 320 (1445)
|+||+.++.+..+... .+....++++++.+||++ ..++ .
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~~-----~ 132 (242)
T cd03295 92 VEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFADR-----Y 132 (242)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHhc-----C
Confidence 9999988654322100 001123567788999975 4443 4
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000523 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1445)
Q Consensus 321 ~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1445)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+..++.+++|+|++|++
T Consensus 133 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~g~tvii~sH~~~~~~~~~d~i~~l~~ 211 (242)
T cd03295 133 PHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQ-ELGKTIVFVTHDIDEAFRLADRIAIMKN 211 (242)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-HcCCEEEEEecCHHHHHHhCCEEEEEEC
Confidence 456999999999999999999999999999999999999999999998765 3245566677888889999999999999
Q ss_pred CeEEEecChhHHH
Q 000523 401 GQIVYQGPRELVL 413 (1445)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1445)
|++++.|+.+++.
T Consensus 212 G~i~~~~~~~~~~ 224 (242)
T cd03295 212 GEIVQVGTPDEIL 224 (242)
T ss_pred CEEEEecCHHHHH
Confidence 9999999987763
No 193
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-35 Score=327.71 Aligned_cols=208 Identities=32% Similarity=0.477 Sum_probs=174.6
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
.++|+++.+. ++.+|+|+|+++++| +++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 65 (211)
T cd03264 2 QLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLK 65 (211)
T ss_pred EEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCcccc
Confidence 4667766652 236999999999999 999999999999999999999876 458999999987543
Q ss_pred --ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000523 928 --ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1005 (1445)
Q Consensus 928 --~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1445)
...++.++|++|++.+++.+||.|++.+....+. ...++.++.++++++.+++.+..++. +..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 137 (211)
T cd03264 66 QPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKK-----IGSLSGGMRR 137 (211)
T ss_pred chHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCc-----hhhCCHHHHH
Confidence 2345679999999999999999999988655432 22233345678999999998776665 3579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1006 Rl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|++. .+.+.+|++++|++ |+++..|
T Consensus 138 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 138 RVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999976 599999999986 46778999999986 7887654
No 194
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.4e-35 Score=333.21 Aligned_cols=203 Identities=25% Similarity=0.367 Sum_probs=168.1
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCC-----CCCCCceeEEEEcCccCCCcC-----ccceEEEEcCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL-----DPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHD 235 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~-----~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d 235 (1445)
++|+|+|+++++||+++|+||||||||||+++|+|.+ +|+ +|+|.++|+++.... .++.++|++|++
T Consensus 14 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 14 HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 4999999999999999999999999999999999999 887 999999999875432 235799999998
Q ss_pred CCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccc
Q 000523 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1445)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1445)
.++ .+||+||+.++.+..+.... .+....++++++.+||.+..+..
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 136 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHGIKLK---------------------------------EELDERVEEALRKAALWDEVKDR 136 (227)
T ss_pred hhc-cccHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCChHHhcc
Confidence 777 89999999886543211000 00112356778899998665543
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
+. +..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . ++|+.++|+..++.+.||++
T Consensus 137 ~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i 210 (227)
T cd03260 137 LH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADRT 210 (227)
T ss_pred CC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCEE
Confidence 20 357999999999999999999999999999999999999999999998754 3 56666888888999999999
Q ss_pred EEecCCeEEEecChhH
Q 000523 396 ILLSDGQIVYQGPREL 411 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~ 411 (1445)
++|++|++++.|++++
T Consensus 211 ~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 211 AFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEeCCEEEEecCccc
Confidence 9999999999998764
No 195
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=5.4e-36 Score=390.32 Aligned_cols=261 Identities=22% Similarity=0.275 Sum_probs=195.7
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCC-CCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGI-DLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1445)
.++.+..++|+.++++.++|.-......+...... +.....++++||++.++.
T Consensus 436 ~~~~~~~~~ri~~il~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~-------------------------- 489 (710)
T TIGR03796 436 LQELEGDLNRLDDVLRNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSP-------------------------- 489 (710)
T ss_pred HHHHHHHHHHHHHHHcCCCccccccccccccccccCCCCCCeEEEEEEEEecCC--------------------------
Confidence 56788889999988877655200000000000000 112357999999999842
Q ss_pred hcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcC
Q 000523 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1445)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1445)
...++|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|
T Consensus 490 ------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q 560 (710)
T TIGR03796 490 ------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQ 560 (710)
T ss_pred ------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEec
Confidence 1124899999999999999999999999999999999999998 9999999999877654 578999999
Q ss_pred CCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccc
Q 000523 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1445)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1445)
++.++ +.|++|||.++. +....+.+.++++.. + .++. +-.++.+.|
T Consensus 561 ~~~lf-~gTi~eNi~l~~----~~~~~~~i~~al~~~---~------------------------l~~~--i~~lp~gl~ 606 (710)
T TIGR03796 561 DIFLF-EGTVRDNLTLWD----PTIPDADLVRACKDA---A------------------------IHDV--ITSRPGGYD 606 (710)
T ss_pred CChhh-hccHHHHhhCCC----CCCCHHHHHHHHHHh---C------------------------CHHH--HHhCcCccc
Confidence 77555 579999998752 111122222222111 0 1111 224677889
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcC
Q 000523 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1445)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1445)
|.+|+.+ .+||||||||++|||||+++|++++||||||+||+.++..+.+.|++ .++|+|+ ++|.. ++...+|
T Consensus 607 t~i~e~G-~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Ii-itHrl-~~i~~~D 679 (710)
T TIGR03796 607 AELAEGG-ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCII-VAHRL-STIRDCD 679 (710)
T ss_pred ceeccCC-CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEE-EecCH-HHHHhCC
Confidence 9999876 47999999999999999999999999999999999999999999975 3455555 55544 5567799
Q ss_pred eEEEecCCeEEEecChhHHHH
Q 000523 394 DIILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1445)
+|++|++|+++++|+++++++
T Consensus 680 ~Iivl~~G~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 680 EIIVLERGKVVQRGTHEELWA 700 (710)
T ss_pred EEEEEeCCEEEEecCHHHHHH
Confidence 999999999999999999875
No 196
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-35 Score=344.87 Aligned_cols=216 Identities=22% Similarity=0.411 Sum_probs=173.2
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-------------------Cccc
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------------------VPQR 226 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------------------~~~~ 226 (1445)
++|+|||++|++|++++|+||||||||||+++|+|+++|+ +|+|.++|.++.+. ..++
T Consensus 40 ~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (320)
T PRK13631 40 VALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELRR 116 (320)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHHh
Confidence 4999999999999999999999999999999999999998 99999999887532 1246
Q ss_pred eEEEEcCCCC-CCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHH
Q 000523 227 TAAYISQHDN-HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKV 305 (1445)
Q Consensus 227 ~~~yv~Q~d~-~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~ 305 (1445)
.++||+|++. .+...||+||+.|+....+.. . .+...+++++++.
T Consensus 117 ~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~ 162 (320)
T PRK13631 117 RVSMVFQFPEYQLFKDTIEKDIMFGPVALGVK-K---------------------------------SEAKKLAKFYLNK 162 (320)
T ss_pred cEEEEEECchhccccchHHHHHHhhHHhcCCC-H---------------------------------HHHHHHHHHHHHH
Confidence 7999999862 344569999998875322110 0 0112245678889
Q ss_pred cCCc-ccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecC
Q 000523 306 LGLD-VCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQP 384 (1445)
Q Consensus 306 lgL~-~~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~ 384 (1445)
+||+ ...+ +.+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+
T Consensus 163 ~gL~~~~~~-----~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~-g~TiiivtHd 235 (320)
T PRK13631 163 MGLDDSYLE-----RSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-N-NKTVFVITHT 235 (320)
T ss_pred cCCChhHhc-----CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecC
Confidence 9996 3344 34457999999999999999999999999999999999999999999998753 3 4556668888
Q ss_pred chhHHhhcCeEEEecCCeEEEecChhHHHH---HHHhcCCCCCC
Q 000523 385 APETYDLFDDIILLSDGQIVYQGPRELVLE---FFASMGFRCPK 425 (1445)
Q Consensus 385 ~~~~~~~~D~iilL~~G~iv~~G~~~~~~~---~f~~lG~~cp~ 425 (1445)
..++.+.||+|++|++|++++.|+++++.+ .++..|..+|.
T Consensus 236 ~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 236 MEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred HHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 888999999999999999999999988742 34445555443
No 197
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.4e-35 Score=352.47 Aligned_cols=208 Identities=27% Similarity=0.451 Sum_probs=175.1
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1445)
++|+|+|+.+++||+++|+||||||||||||+|+|.++|+ +|+|.++|.++..... ++.++||+|++.+++.+|
T Consensus 17 ~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~t 93 (402)
T PRK09536 17 TVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEFD 93 (402)
T ss_pred EEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCCC
Confidence 4999999999999999999999999999999999999998 9999999998866443 467999999988889999
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
|+||+.++..-.. + +.. . ...+...+++++++.+||.+..++.+ +
T Consensus 94 v~e~v~~~~~~~~-~-~~~---------------~-------------~~~~~~~~v~~~le~vgl~~~~~~~~-----~ 138 (402)
T PRK09536 94 VRQVVEMGRTPHR-S-RFD---------------T-------------WTETDRAAVERAMERTGVAQFADRPV-----T 138 (402)
T ss_pred HHHHHHhccchhc-c-ccc---------------C-------------CCHHHHHHHHHHHHHcCCchhhcCCh-----h
Confidence 9999998642110 0 000 0 00011235678899999987776554 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1445)
.|||||||||.|||+|+++|++|+|||||+|||+.++..+.+.|+++.+ . +++|+.++|+.+++.++||++++|++|+
T Consensus 139 ~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~-g~TIIivsHdl~~~~~~adrii~l~~G~ 216 (402)
T PRK09536 139 SLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-D-GKTAVAAIHDLDLAARYCDELVLLADGR 216 (402)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEECCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999864 3 4456668899999999999999999999
Q ss_pred EEEecChhHHH
Q 000523 403 IVYQGPRELVL 413 (1445)
Q Consensus 403 iv~~G~~~~~~ 413 (1445)
+++.|++++++
T Consensus 217 iv~~G~~~ev~ 227 (402)
T PRK09536 217 VRAAGPPADVL 227 (402)
T ss_pred EEEecCHHHHh
Confidence 99999998864
No 198
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-35 Score=343.47 Aligned_cols=204 Identities=25% Similarity=0.367 Sum_probs=169.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCC------------------------
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE------------------------ 221 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~------------------------ 221 (1445)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|+++|.+...
T Consensus 21 ~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (305)
T PRK13651 21 KALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKI 97 (305)
T ss_pred cceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceeccccccccccccccccccccccccccc
Confidence 4999999999999999999999999999999999999998 9999999876421
Q ss_pred ---cCccceEEEEcCCC-CCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhH
Q 000523 222 ---FVPQRTAAYISQHD-NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANV 297 (1445)
Q Consensus 222 ---~~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~ 297 (1445)
...++.++||+|++ ..++..||+||+.|+....+.. .++...
T Consensus 98 ~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~----------------------------------~~~~~~ 143 (305)
T PRK13651 98 KKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVS----------------------------------KEEAKK 143 (305)
T ss_pred chHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCC----------------------------------HHHHHH
Confidence 01135799999985 3556689999999875433210 001123
Q ss_pred HHHHHHHHcCCc-ccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCe
Q 000523 298 ITDYYLKVLGLD-VCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGT 376 (1445)
Q Consensus 298 ~~~~~l~~lgL~-~~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t 376 (1445)
+++++++.+||+ +..+. .+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.
T Consensus 144 ~~~~~l~~~gL~~~~~~~-----~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~ 216 (305)
T PRK13651 144 RAAKYIELVGLDESYLQR-----SPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-GK 216 (305)
T ss_pred HHHHHHHHcCCChhhhhC-----ChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CC
Confidence 467788999996 44554 4456999999999999999999999999999999999999999999998753 3 45
Q ss_pred EEEEEecCchhHHhhcCeEEEecCCeEEEecChhHHH
Q 000523 377 AVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 377 ~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1445)
+|+.++|+.+++.+.+|+|++|++|++++.|+++++.
T Consensus 217 tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 217 TIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred EEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 5666889999999999999999999999999998874
No 199
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.6e-35 Score=330.64 Aligned_cols=195 Identities=29% Similarity=0.415 Sum_probs=161.7
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1445)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 35999999999999999999999999999999999999998 9999999998765431 3579999999888
Q ss_pred CCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccc
Q 000523 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1445)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1445)
++.+||+||+.++....+... .+....++++++.+||++..+..+
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 138 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------------------------------KERRERAEELLERVGLGDRLNHYP- 138 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhcCh-
Confidence 999999999998754322100 001123567889999987666544
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000523 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1445)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1445)
+.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+..++. .||++++
T Consensus 139 ----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 139 ----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEA-GTTIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHh-hhcEEEE
Confidence 4699999999999999999999999999999999999999999999876423 445555777777776 9999999
Q ss_pred ecCCeE
Q 000523 398 LSDGQI 403 (1445)
Q Consensus 398 L~~G~i 403 (1445)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 200
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=330.38 Aligned_cols=201 Identities=25% Similarity=0.345 Sum_probs=166.0
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1445)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 35999999999999999999999999999999999999998 9999999998865432 2469999999888
Q ss_pred CCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccc
Q 000523 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1445)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1445)
++.+||+||+.+.....+... .+.+.+++++++.+||++..++.+
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 143 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------------------------------AEINSRALEMLAAVGLEHRANHRP- 143 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 889999999998653321100 001124567889999987666544
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000523 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1445)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1445)
+.||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.. +|++++
T Consensus 144 ----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 144 ----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRL-QGTAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEEeCCHHHHHh-hCEEEE
Confidence 469999999999999999999999999999999999999999999987543 34555557777777765 589999
Q ss_pred ecCCeEEEecCh
Q 000523 398 LSDGQIVYQGPR 409 (1445)
Q Consensus 398 L~~G~iv~~G~~ 409 (1445)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998864
No 201
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.8e-35 Score=377.94 Aligned_cols=253 Identities=19% Similarity=0.229 Sum_probs=194.2
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.++.....+|+.++++.+++. . +....+....+++|+|+++.++.
T Consensus 308 ~~~~~~s~~ri~~~l~~~~~~------~--~~~~~~~~~~~i~~~~v~f~y~~--------------------------- 352 (592)
T PRK10790 308 LQQAVVAGERVFELMDGPRQQ------Y--GNDDRPLQSGRIDIDNVSFAYRD--------------------------- 352 (592)
T ss_pred HHHHHHHHHHHHHHhcCCCcc------C--CCCccCCCCCeEEEEEEEEEeCC---------------------------
Confidence 467778888888877655431 0 00011112346999999998731
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1445)
+ .++|+|+|++++|||.++|+|+||||||||+++|+|+++|+ +|+|.+||+++++..+ ++.++||+|+
T Consensus 353 ---~---~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~ 423 (592)
T PRK10790 353 ---D---NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQD 423 (592)
T ss_pred ---C---CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccC
Confidence 1 23899999999999999999999999999999999999998 9999999999887654 4789999998
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
+.+|+ .|++|||.++.. ...+.+.++++. .+ .++.++ .|+++.||
T Consensus 424 ~~lF~-~Ti~~NI~~~~~-----~~d~~i~~a~~~---~g------------------------l~~~i~--~lp~Gldt 468 (592)
T PRK10790 424 PVVLA-DTFLANVTLGRD-----ISEEQVWQALET---VQ------------------------LAELAR--SLPDGLYT 468 (592)
T ss_pred Ccccc-chHHHHHHhCCC-----CCHHHHHHHHHH---cC------------------------cHHHHH--hccccccc
Confidence 76666 599999998631 111222222111 11 111222 26778899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.+|+.+. .||||||||++|||||+++|++++||||||+||+.++..|.+.|+++. .++|+|+. +|.. +....+|+
T Consensus 469 ~i~e~g~-~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~--~~~tvIiv-tHr~-~~l~~~D~ 543 (592)
T PRK10790 469 PLGEQGN-NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVR--EHTTLVVI-AHRL-STIVEADT 543 (592)
T ss_pred cccCCCC-CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--CCCEEEEE-ecch-HHHHhCCE
Confidence 9998654 699999999999999999999999999999999999999999998864 34566654 4443 66778999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|++++.|+++++.+
T Consensus 544 ii~l~~G~i~~~G~~~~L~~ 563 (592)
T PRK10790 544 ILVLHRGQAVEQGTHQQLLA 563 (592)
T ss_pred EEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999864
No 202
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-35 Score=318.67 Aligned_cols=206 Identities=27% Similarity=0.379 Sum_probs=179.8
Q ss_pred CceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCccc----ccceEEEeccCCCCCC
Q 000523 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQET----FARISGYCEQNDIHSP 945 (1445)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~Q~d~~~~ 945 (1445)
+...+++|||+++++||++||+||||||||||+|+|+|..+ +..|+|.++|.++.... .+.-++..+|...+|+
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~--P~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~ 92 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYK--PSSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP 92 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeeccccc--CCCceEEECCcccCCCCHHHHHhccceeecccccccC
Confidence 45689999999999999999999999999999999999876 56899999999875422 2445788999999999
Q ss_pred CCCHHHHHHHHHHhcC--------CCC-CCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhC
Q 000523 946 FVTIYESLLFSAWLRL--------SPE-VDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVAN 1016 (1445)
Q Consensus 946 ~lTv~E~l~f~~~lr~--------~~~-~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~ 1016 (1445)
.+||.||+..++..+. +.. ...++..++..++++.+||.+.+|...| +||+||||||.|||||+.+
T Consensus 93 ~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 93 GLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALATQ 167 (250)
T ss_pred CCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhcC
Confidence 9999999998755331 111 1234455678899999999999999854 6999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1017 PSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1017 p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
|++|+||||.+||.+.....+.+.|+++.+ .|.||+++-|+++. ++.+||||++|+. |+++..|++
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~~-G~~IAeG~P 234 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLNY-GEVIAEGTP 234 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEeccC-CcCcccCCH
Confidence 999999999999999999999999999987 47999999999985 9999999999986 799999997
No 203
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=5.1e-35 Score=334.68 Aligned_cols=215 Identities=20% Similarity=0.259 Sum_probs=180.5
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEc
Confidence 477888887763 2469999999999999999999999999999999999876 4589999999765
Q ss_pred Cc----------------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-c
Q 000523 926 KQ----------------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-Q 988 (1445)
Q Consensus 926 ~~----------------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-~ 988 (1445)
.. ..+++.++|++|++.+++.+||+||+.+...... .......++++.++++.+++.+.. +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~ 147 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL--GLSKQEARERAVKYLAKVGIDERAQG 147 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHcCCChhhhh
Confidence 31 1345679999999999999999999987542111 123344456688999999997653 4
Q ss_pred ccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhce
Q 000523 989 SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDE 1068 (1445)
Q Consensus 989 ~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~ 1068 (1445)
.. +..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++.|+|||+++|+++ ++.+.+|+
T Consensus 148 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~ 221 (257)
T PRK10619 148 KY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSH 221 (257)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCE
Confidence 33 4679999999999999999999999999999999999999999999999877999999999986 57778999
Q ss_pred EeEEecCcEEEEEcCC
Q 000523 1069 LFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1069 v~~l~~gG~~~y~G~~ 1084 (1445)
+++|++ |++++.|+.
T Consensus 222 i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 222 VIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEC-CEEEEeCCH
Confidence 999986 799999875
No 204
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.9e-35 Score=328.40 Aligned_cols=208 Identities=24% Similarity=0.312 Sum_probs=174.1
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+. +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 45678877662 12369999999999999999999999999999999999875 45899999998754
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000523 927 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1000 (1445)
Q Consensus 927 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1445)
.. .+++.++|++|++.+++..|+.|++.+....+ ....++.++.++++++.+++.+..+.. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----chhCC
Confidence 21 13567999999998888999999998865443 123334445678899999998766655 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEE
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1078 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~ 1078 (1445)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++ |++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i 215 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHL 215 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999777899999999986 47778999999986 565
No 205
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=9.2e-36 Score=377.91 Aligned_cols=256 Identities=24% Similarity=0.379 Sum_probs=192.8
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.++..+.++|+.++++.+++ ..+..+ ........+++|+||++.++.
T Consensus 304 ~~~~~~s~~ri~~ll~~~~~-----~~~~~~-~~~~~~~~~i~~~~v~f~y~~--------------------------- 350 (574)
T PRK11160 304 LGQVIASARRINEITEQKPE-----VTFPTT-STAAADQVSLTLNNVSFTYPD--------------------------- 350 (574)
T ss_pred HHHHHHHHHHHHHHHhCCCC-----CCCCcc-cCCCCCCCeEEEEEEEEECCC---------------------------
Confidence 45667788888887776554 111000 001122457999999999732
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1445)
.+.++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 351 -----~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~ 422 (574)
T PRK11160 351 -----QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQR 422 (574)
T ss_pred -----CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEccc
Confidence 1124899999999999999999999999999999999999998 9999999999887654 4679999998
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
+.++ +.|++||+.++.. ....+.+.++.+. .+ .++. .-. +++.||
T Consensus 423 ~~lf-~~ti~~Ni~~~~~----~~~~~~i~~al~~---~~------------------------l~~~--i~~-p~GldT 467 (574)
T PRK11160 423 VHLF-SATLRDNLLLAAP----NASDEALIEVLQQ---VG------------------------LEKL--LED-DKGLNA 467 (574)
T ss_pred chhh-cccHHHHhhcCCC----ccCHHHHHHHHHH---cC------------------------CHHH--HcC-ccccCc
Confidence 7555 5699999988631 1111111111111 00 0111 123 677899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.+|+.+. .||||||||++|||+++++|++|+|||||++||+.++..+.+.|++.. .++|+|+ ++|..+ ....+|+
T Consensus 468 ~vge~g~-~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~~~tvii-itHr~~-~~~~~d~ 542 (574)
T PRK11160 468 WLGEGGR-QLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--QNKTVLM-ITHRLT-GLEQFDR 542 (574)
T ss_pred hhcCCCC-CCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--CCCEEEE-EecChh-HHHhCCE
Confidence 9998654 699999999999999999999999999999999999999999998863 3456555 444444 4567999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|++++.|+++++++
T Consensus 543 i~~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 543 ICVMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEEEeCCeEEEeCCHHHHHh
Confidence 99999999999999999865
No 206
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=6.4e-36 Score=389.22 Aligned_cols=257 Identities=24% Similarity=0.307 Sum_probs=196.2
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.++.+..++|+.++++.++|. .+..+....+....+|+|+||++.++.
T Consensus 438 ~~~~~~~~~ri~~~l~~~~e~-----~~~~~~~~~~~~~~~I~~~~vsf~y~~--------------------------- 485 (708)
T TIGR01193 438 LQAARVANNRLNEVYLVDSEF-----INKKKRTELNNLNGDIVINDVSYSYGY--------------------------- 485 (708)
T ss_pred HHHHHHHHHHHHHHHcCCCcc-----cccccccCCCCCCCcEEEEEEEEEcCC---------------------------
Confidence 567788889998888766551 100000111223457999999999731
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1445)
..++|+|+|++|+||+.++|+||||||||||+++|+|+++|+ +|+|++||.++++... ++.++||+|+
T Consensus 486 ------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~ 556 (708)
T TIGR01193 486 ------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQE 556 (708)
T ss_pred ------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecC
Confidence 124899999999999999999999999999999999999998 9999999999877654 4789999998
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
+.+| +.||+|||.++.+. ....+.+.++++.. + .++. +..++.+.||
T Consensus 557 ~~lf-~gTI~eNi~l~~~~---~~~~~~i~~a~~~a---~------------------------l~~~--i~~lp~gldt 603 (708)
T TIGR01193 557 PYIF-SGSILENLLLGAKE---NVSQDEIWAACEIA---E------------------------IKDD--IENMPLGYQT 603 (708)
T ss_pred ceeh-hHHHHHHHhccCCC---CCCHHHHHHHHHHh---C------------------------CHHH--HHhcccccCc
Confidence 7655 56999999986311 11112222222111 0 1111 2247788899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.||+.+ .+||||||||++||||++++|++|+||||||+||+.++..+.+.|++. .++|+|+ ++|.. ++.+.+|+
T Consensus 604 ~i~e~G-~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~Ii-itHr~-~~~~~~D~ 677 (708)
T TIGR01193 604 ELSEEG-SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTIIF-VAHRL-SVAKQSDK 677 (708)
T ss_pred EecCCC-CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEEEE-Eecch-HHHHcCCE
Confidence 999865 469999999999999999999999999999999999999999999863 3455554 55544 46688999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|++++.|+++++++
T Consensus 678 i~~l~~G~i~~~G~~~~L~~ 697 (708)
T TIGR01193 678 IIVLDHGKIIEQGSHDELLD 697 (708)
T ss_pred EEEEECCEEEEECCHHHHHh
Confidence 99999999999999999865
No 207
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-35 Score=333.15 Aligned_cols=214 Identities=27% Similarity=0.376 Sum_probs=180.0
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 66778877653 2469999999999999999999999999999999999875 45899999998764
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000523 927 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 927 ~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1445)
.. ..++.++|++|++.+++.+||.||+.+....+. ....++.+..++++++.+++.+..+.. ++.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 31 134679999999988888999999987643321 122334455688899999998766554 4579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
||||++||++|+.+|++|+|||||+|||+.++..+.+.++++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998777999999999986 58889999999985 7999998
Q ss_pred CC
Q 000523 1083 PL 1084 (1445)
Q Consensus 1083 ~~ 1084 (1445)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 85
No 208
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=6.1e-36 Score=344.93 Aligned_cols=256 Identities=27% Similarity=0.395 Sum_probs=201.4
Q ss_pred hhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhhcC
Q 000523 80 ERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIP 159 (1445)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~ 159 (1445)
.++.+-+|+-+.+++.++ +.+++.++-|+..+..|++++-- +
T Consensus 304 ~Ar~s~~Rl~~lL~~~p~--------~~~~m~LP~P~g~L~Ve~l~~~P-P----------------------------- 345 (580)
T COG4618 304 AARQSYKRLNELLAELPA--------AAERMPLPAPQGALSVERLTAAP-P----------------------------- 345 (580)
T ss_pred HHHHHHHHHHHHHHhCcc--------ccCCCCCCCCCceeeEeeeeecC-C-----------------------------
Confidence 344444555554444443 33467788899999999999731 1
Q ss_pred CccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCcc---ceEEEEcCCCC
Q 000523 160 SKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQ---RTAAYISQHDN 236 (1445)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~---~~~~yv~Q~d~ 236 (1445)
..++++|+|+||.+.+|+-++|+||||||||||.++|.|..+|. +|.|.+||.+++++++. +.+||.||+ .
T Consensus 346 --g~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQd-V 419 (580)
T COG4618 346 --GQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQD-V 419 (580)
T ss_pred --CCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCccc-c
Confidence 12356999999999999999999999999999999999999998 99999999999888764 789999995 4
Q ss_pred CCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccc
Q 000523 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1445)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1445)
-++..||.|||. |+.. ....+.+.++++.... .+ =++.|++++||.|
T Consensus 420 eLF~GTIaeNIa---Rf~~-~~d~~kIieAA~lAgv---------------------------He--lIl~lP~GYdT~i 466 (580)
T COG4618 420 ELFDGTIAENIA---RFGE-EADPEKVIEAARLAGV---------------------------HE--LILRLPQGYDTRI 466 (580)
T ss_pred eecCCcHHHHHH---hccc-cCCHHHHHHHHHHcCh---------------------------HH--HHHhCcCCccCcc
Confidence 455579999995 3321 1122233333332211 11 1678999999999
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000523 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1445)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1445)
|+.+. +||||||||+++||||+++|.+++||||-|.||+..+..+.+.|.+... .++++|+. + |++.+...+|+|+
T Consensus 467 G~~G~-~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvvi-a-HRPs~L~~~Dkil 542 (580)
T COG4618 467 GEGGA-TLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVVI-A-HRPSALASVDKIL 542 (580)
T ss_pred CCCCC-CCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEEE-e-cCHHHHhhcceee
Confidence 98765 6999999999999999999999999999999999999999999988643 45555553 3 4678999999999
Q ss_pred EecCCeEEEecChhHHHHHH
Q 000523 397 LLSDGQIVYQGPRELVLEFF 416 (1445)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f 416 (1445)
+|++|++..+|+++|++...
T Consensus 543 vl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 543 VLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred eecCChHHhcCCHHHHHHHh
Confidence 99999999999999998754
No 209
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-35 Score=341.00 Aligned_cols=205 Identities=21% Similarity=0.324 Sum_probs=169.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC-------ccceEEEEcCCCC-C
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHDN-H 237 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~-~ 237 (1445)
++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++. .
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (286)
T PRK13646 21 QAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQ 97 (286)
T ss_pred CceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHhc
Confidence 4999999999999999999999999999999999999998 999999999875421 2457999999852 3
Q ss_pred CCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc-ccccccc
Q 000523 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMV 316 (1445)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1445)
+...||.||+.|+....+.. ..+....++++++.+||. +..++.
T Consensus 98 l~~~tv~e~i~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~- 142 (286)
T PRK13646 98 LFEDTVEREIIFGPKNFKMN----------------------------------LDEVKNYAHRLLMDLGFSRDVMSQS- 142 (286)
T ss_pred cchhhHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhhhCC-
Confidence 34469999999865322110 001122456788999996 455543
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000523 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1445)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1445)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. ..+++|+.++|+.+++.+.+|+|+
T Consensus 143 ----~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~-~~g~tvl~vtH~~~~~~~~~dri~ 217 (286)
T PRK13646 143 ----PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQT-DENKTIILVSHDMNEVARYADEVI 217 (286)
T ss_pred ----cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHH-hCCCEEEEEecCHHHHHHhCCEEE
Confidence 456999999999999999999999999999999999999999999998754 335666668888899999999999
Q ss_pred EecCCeEEEecChhHHH
Q 000523 397 LLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1445)
+|++|++++.|+++++.
T Consensus 218 ~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 218 VMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEECCEEEEECCHHHHH
Confidence 99999999999988764
No 210
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-35 Score=340.76 Aligned_cols=217 Identities=25% Similarity=0.347 Sum_probs=179.7
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.++... ...+.+|+|||++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 56888888874110 011359999999999999999999999999999999999876 45899999998863
Q ss_pred c-------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000523 927 Q-------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 996 (1445)
Q Consensus 927 ~-------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 996 (1445)
. ..+++.+||++|++ .+++ .||.|++.|..... ..+.++.++++.++++.++|. +..+.. +
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 23456799999986 3444 69999999875432 233455566788999999996 455544 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 679999999999999999999999999999999999999999999999877999999999986 57788999999985 8
Q ss_pred EEEEEcCC
Q 000523 1077 QEIYVGPL 1084 (1445)
Q Consensus 1077 ~~~y~G~~ 1084 (1445)
++++.|+.
T Consensus 221 ~i~~~g~~ 228 (288)
T PRK13643 221 HIISCGTP 228 (288)
T ss_pred EEEEECCH
Confidence 99999986
No 211
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.2e-35 Score=330.57 Aligned_cols=217 Identities=24% Similarity=0.280 Sum_probs=172.1
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+... .....+|+|+|++|++||+++|+|||||||||||++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 4567777765310 001369999999999999999999999999999999999875 45899999998764
Q ss_pred c------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000523 927 Q------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 997 (1445)
Q Consensus 927 ~------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1445)
. ..+++.++|++|++ .+.+.+||+||+.+........ ...+..+..++++++.+++. +..+.. +.
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRY-----PH 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCC-----ch
Confidence 3 23456799999998 4667899999998865433211 11111122235788999985 455544 35
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999986 56678999999985 7
Q ss_pred EEEEEc
Q 000523 1077 QEIYVG 1082 (1445)
Q Consensus 1077 ~~~y~G 1082 (1445)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 887654
No 212
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5.7e-35 Score=330.07 Aligned_cols=205 Identities=26% Similarity=0.382 Sum_probs=169.6
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc--cceEEEEcCCCCCCCCCCH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP--QRTAAYISQHDNHIGEMTV 243 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lTV 243 (1445)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+||
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~ 91 (236)
T TIGR03864 15 RALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSV 91 (236)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcH
Confidence 4999999999999999999999999999999999999998 9999999988754322 2579999999888889999
Q ss_pred HHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccccc
Q 000523 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1445)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1445)
+||+.+.....+... .+....++++++.+||++..++.++ .
T Consensus 92 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~ 132 (236)
T TIGR03864 92 RQNLRYHAALHGLSR----------------------------------AEARERIAALLARLGLAERADDKVR-----E 132 (236)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCChh-----h
Confidence 999987643321100 0011235667889999876665554 5
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000523 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1445)
Q Consensus 324 LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1445)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++.. +.+++.++|+..++. .+|++++|++|++
T Consensus 133 LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~-~~d~i~~l~~G~i 210 (236)
T TIGR03864 133 LNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQ-GLSVLWATHLVDEIE-ADDRLVVLHRGRV 210 (236)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhC-CCEEEEEecChhhHh-hCCEEEEEeCCeE
Confidence 99999999999999999999999999999999999999999999876433 445555777777776 4999999999999
Q ss_pred EEecChhHHHH
Q 000523 404 VYQGPRELVLE 414 (1445)
Q Consensus 404 v~~G~~~~~~~ 414 (1445)
++.|+.+++.+
T Consensus 211 ~~~~~~~~~~~ 221 (236)
T TIGR03864 211 LADGAAAELRG 221 (236)
T ss_pred EEeCCHHHHHH
Confidence 99999887754
No 213
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-35 Score=342.44 Aligned_cols=218 Identities=25% Similarity=0.309 Sum_probs=179.6
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.++... .....+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLL--PDTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEEeceecc
Confidence 67888888874210 011359999999999999999999999999999999999876 35799999986531
Q ss_pred ---------------------------cccccceEEEeccCC-CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Q 000523 927 ---------------------------QETFARISGYCEQND-IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVM 978 (1445)
Q Consensus 927 ---------------------------~~~~~~~~gyv~Q~d-~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l 978 (1445)
....++.+|||+|++ ..+...||+|++.|+.... ..+.++.++++++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 123456799999985 3344579999999875432 234455566789999
Q ss_pred HHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000523 979 ELVELN-PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1057 (1445)
Q Consensus 979 ~~l~L~-~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hq 1057 (1445)
+.+||. +..+.. +..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+.|+|||+++|+
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 566654 45799999999999999999999999999999999999999999999998779999999999
Q ss_pred ccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1058 PSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1058 ps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
++ .+.+.+|++++|++ |++++.|+.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 86 57789999999985 799999986
No 214
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.1e-35 Score=314.04 Aligned_cols=202 Identities=24% Similarity=0.391 Sum_probs=185.4
Q ss_pred CceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCH
Q 000523 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTI 949 (1445)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv 949 (1445)
+++.+++|+||.++||+++|++|+|||||||++++|.|... +.+|+|.++|.+.++. .+.++||.|.+.-++|.+||
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~-~~~rIGyLPEERGLy~k~tv 89 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQE-IKNRIGYLPEERGLYPKMTV 89 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhh-hhhhcccChhhhccCccCcH
Confidence 45789999999999999999999999999999999999887 5689999999988754 34568999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000523 950 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1445)
Q Consensus 950 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgL 1029 (1445)
.|.|.|-|.++. ++.++.++.++.+|+.+++....... ++.||.|++|++.+-.+++++|.+++||||+|||
T Consensus 90 ~dql~yla~LkG---m~~~e~~~~~~~wLer~~i~~~~~~k-----Ik~LSKGnqQKIQfisaviHePeLlILDEPFSGL 161 (300)
T COG4152 90 EDQLKYLAELKG---MPKAEIQKKLQAWLERLEIVGKKTKK-----IKELSKGNQQKIQFISAVIHEPELLILDEPFSGL 161 (300)
T ss_pred HHHHHHHHHhcC---CcHHHHHHHHHHHHHhccccccccch-----HHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCC
Confidence 999999998874 56677777899999999999888776 4689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1030 D~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
||.+.+.+.+.+.++.+.|.|||+++|++. .+-++||++++|++ |+.|.+|+.
T Consensus 162 DPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 162 DPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred ChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 999999999999999999999999999986 68999999999985 799999986
No 215
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=3.1e-35 Score=327.18 Aligned_cols=206 Identities=24% Similarity=0.344 Sum_probs=172.8
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
.++|+++.++ ++.+|+++|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCc
Confidence 4667776653 2469999999999999999999999999999999999875 458999999987632
Q ss_pred -----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000523 928 -----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 928 -----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1445)
...++.++|++|++.+++.+|+.|++.+...... ....++.++.++++++.+++.+..+.. +..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAY-----PAQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhC-----ccccCHH
Confidence 2345679999999998999999999987643111 122334455678899999998776665 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 999999999999999999999999999999999999999999877899999999986 57788999999986 44
No 216
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.1e-35 Score=335.29 Aligned_cols=212 Identities=27% Similarity=0.369 Sum_probs=170.5
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 92 (243)
T TIGR02315 16 QALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIE 92 (243)
T ss_pred ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccc
Confidence 4999999999999999999999999999999999999998 999999998875432 2457999999988899
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
.+||+||+.++..... .. ..... +. ...+....++++++.+||.+..+..
T Consensus 93 ~~tv~~~l~~~~~~~~--~~---~~~~~------~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~---- 142 (243)
T TIGR02315 93 RLTVLENVLHGRLGYK--PT---WRSLL------GR---------------FSEEDKERALSALERVGLADKAYQR---- 142 (243)
T ss_pred cccHHHHHhhcccccc--cc---hhhhh------cc---------------ccHHHHHHHHHHHHHcCcHhhhcCC----
Confidence 9999999987532100 00 00000 00 0001123456788999998666544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.++||++++|+
T Consensus 143 -~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiii~tH~~~~~~~~~d~v~~l~ 220 (243)
T TIGR02315 143 -ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKE-DGITVIINLHQVDLAKKYADRIVGLK 220 (243)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHH-cCCEEEEEeCCHHHHHHhcCeEEEEE
Confidence 4469999999999999999999999999999999999999999999987643 34556667888888999999999999
Q ss_pred CCeEEEecChhHH
Q 000523 400 DGQIVYQGPRELV 412 (1445)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1445)
+|++++.|+++++
T Consensus 221 ~G~i~~~~~~~~~ 233 (243)
T TIGR02315 221 AGEIVFDGAPSEL 233 (243)
T ss_pred CCEEEecCCHHHh
Confidence 9999999998765
No 217
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4.3e-35 Score=344.51 Aligned_cols=208 Identities=23% Similarity=0.251 Sum_probs=174.0
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCC--C
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHD--N 236 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1445)
..+|+|||++|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.+... ++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 46999999999999999999999999999999999999998 9999999998865432 35799999987 5
Q ss_pred CCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc-cccccc
Q 000523 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1445)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1445)
+++.+||.||+.+..+..+.+.. ..+....++++++.+||+ +..+
T Consensus 111 l~p~~tv~~~i~~~l~~~~~~~~--------------------------------~~~~~~~~~~~l~~vgl~~~~~~-- 156 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHPKLS--------------------------------RQEVKDRVKAMMLKVGLLPNLIN-- 156 (331)
T ss_pred cCCCCCHHHHHHHHHHHhccCCC--------------------------------HHHHHHHHHHHHHHcCCChHHhc--
Confidence 78899999999886543210000 001123456788999994 3344
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
+.+..|||||||||+||+||+.+|++|++||||+|||..++.++.+.|+++.+ ..+++++.++|+...+.+++|+|
T Consensus 157 ---~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~~~til~iTHdl~~~~~~~dri 232 (331)
T PRK15079 157 ---RYPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQR-EMGLSLIFIAHDLAVVKHISDRV 232 (331)
T ss_pred ---CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhCCEE
Confidence 44557999999999999999999999999999999999999999999998765 33566777899999999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000523 396 ILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1445)
++|.+|++++.|+.+++.
T Consensus 233 ~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 233 LVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999998875
No 218
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.9e-35 Score=328.77 Aligned_cols=199 Identities=27% Similarity=0.421 Sum_probs=164.4
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCC--CCCCH
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHS--PFVTI 949 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~--~~lTv 949 (1445)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.. ..++.++|++|++.+. ...||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 469999999999999999999999999999999999865 45899999997653 2456799999997663 34799
Q ss_pred HHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000523 950 YESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1445)
Q Consensus 950 ~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsg 1028 (1445)
.||+.+....+.. .....+..++.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQ-----IGELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 9999875432110 0011223345678999999998766665 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1029 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1029 LD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999877899999999986 57788999999975 4 66654
No 219
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=5.6e-35 Score=332.48 Aligned_cols=214 Identities=23% Similarity=0.311 Sum_probs=177.2
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEcCc
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 923 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 923 (1445)
++++|+++.+. +..+|+|+|++|++||+++|+|+||||||||+++|+|..++. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 46778877653 235999999999999999999999999999999999986531 12899999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000523 924 PKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGLP 994 (1445)
Q Consensus 924 ~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~~ 994 (1445)
+... ...++.++|++|++.+++ .|++||+.+....+. .....+.++.++++++.++|. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 234567999999988888 999999988654431 122334455688999999997 444443
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec
Q 000523 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++++|++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 467999999999999999999999999999999999999999999999876 489999999986 57788999999986
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 789999875
No 220
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-35 Score=343.79 Aligned_cols=218 Identities=25% Similarity=0.342 Sum_probs=180.0
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 488999998875210 012359999999999999999999999999999999999876 4589999999765
Q ss_pred Cc-------------------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc
Q 000523 926 KQ-------------------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN 984 (1445)
Q Consensus 926 ~~-------------------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~ 984 (1445)
.. ...++.+|||+|++ .+++ .||+||+.|+.... ..+.++..++++++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 13457799999986 3454 59999998864322 223444455688999999996
Q ss_pred -ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHH
Q 000523 985 -PLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIF 1063 (1445)
Q Consensus 985 -~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~ 1063 (1445)
+..+.. +..||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++.++|+|||+++|+++ .+.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455543 4579999999999999999999999999999999999999999999998777999999999986 477
Q ss_pred HhhceEeEEecCcEEEEEcCC
Q 000523 1064 EAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1064 ~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
+.+|++++|++ |+++..|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999986 799999985
No 221
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-35 Score=339.21 Aligned_cols=215 Identities=27% Similarity=0.393 Sum_probs=181.2
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-++++|+++.++ +++.+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 478899988773 12359999999999999999999999999999999999876 4689999999876
Q ss_pred Cc-----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000523 926 KQ-----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 999 (1445)
Q Consensus 926 ~~-----~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 999 (1445)
.. ..+++.+||++|++. .....||+|++.+..... ..+.++.++.++++++.++|.+..+.. ++.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 31 234567999999874 334579999998864322 223444456688999999998877765 4579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEE
Q 000523 1000 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1078 (1445)
Q Consensus 1000 SgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~ 1078 (1445)
|||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 899999999986 46678999999986 799
Q ss_pred EEEcCC
Q 000523 1079 IYVGPL 1084 (1445)
Q Consensus 1079 ~y~G~~ 1084 (1445)
++.|+.
T Consensus 221 ~~~g~~ 226 (283)
T PRK13636 221 ILQGNP 226 (283)
T ss_pred EEeCCH
Confidence 999986
No 222
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=6.7e-35 Score=326.70 Aligned_cols=197 Identities=25% Similarity=0.358 Sum_probs=170.8
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHH
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYE 951 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E 951 (1445)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... .+.++|++|++.+++.+|++|
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 469999999999999999999999999999999999875 46899999998764322 256899999998888899999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000523 952 SLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1031 (1445)
Q Consensus 952 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~ 1031 (1445)
++.+....+. .. ++.+.++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+
T Consensus 90 ~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~ 157 (223)
T TIGR03740 90 NLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKK-----AKQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDP 157 (223)
T ss_pred HHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhh-----HhhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCH
Confidence 9987654432 11 23467899999998877665 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCC
Q 000523 1032 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLG 1085 (1445)
Q Consensus 1032 ~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~ 1085 (1445)
.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|+..
T Consensus 158 ~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 158 IGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999777899999999986 57788999999985 7999999864
No 223
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=6.7e-36 Score=407.27 Aligned_cols=263 Identities=21% Similarity=0.290 Sum_probs=199.2
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCC-----CCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHH
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGID-----LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDIL 152 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~ 152 (1445)
.+.+++..+|+.++++..++ +..+ +.-+.+ ....+|+|+||++.|..
T Consensus 1126 ~~~a~~a~~ri~~ll~~~~~-----~~~~-~~~~~~~~~~~~~~g~I~f~nVsF~Y~~---------------------- 1177 (1466)
T PTZ00265 1126 SENAKLSFEKYYPLIIRKSN-----IDVR-DNGGIRIKNKNDIKGKIEIMDVNFRYIS---------------------- 1177 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCCc-----CCCC-CCcccccccCCCCCceEEEEEEEEECCC----------------------
Confidence 56778888998888876543 1100 111111 12357999999999842
Q ss_pred hhhhhcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC---------------------------
Q 000523 153 NYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--------------------------- 205 (1445)
Q Consensus 153 ~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--------------------------- 205 (1445)
+ +..+||+|+|++|+||+.+||+||||||||||+++|+|+++|+
T Consensus 1178 --------~-~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1248 (1466)
T PTZ00265 1178 --------R-PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQ 1248 (1466)
T ss_pred --------C-CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccc
Confidence 1 1235999999999999999999999999999999999999982
Q ss_pred ------------------------CCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCCHHHHHHHhHHhcCCCc
Q 000523 206 ------------------------LKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMTVRETLAFSARCQGVGT 258 (1445)
Q Consensus 206 ------------------------~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~ 258 (1445)
...+|+|++||+++++... ++.++||+|++.+| +.||+|||.++.. ..
T Consensus 1249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIreNI~~g~~----~a 1323 (1466)
T PTZ00265 1249 NVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIYENIKFGKE----DA 1323 (1466)
T ss_pred ccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHHHHHhcCCC----CC
Confidence 0138999999999987764 57899999987555 6899999999731 12
Q ss_pred hhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHH
Q 000523 259 RYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMM 338 (1445)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~aL 338 (1445)
..+.+.++++.... ++. +-.|++++||.||+.+. .||||||||++|||||
T Consensus 1324 t~eeI~~A~k~A~l---------------------------~~f--I~~LP~GydT~VGe~G~-~LSGGQkQRIaIARAL 1373 (1466)
T PTZ00265 1324 TREDVKRACKFAAI---------------------------DEF--IESLPNKYDTNVGPYGK-SLSGGQKQRIAIARAL 1373 (1466)
T ss_pred CHHHHHHHHHHcCC---------------------------HHH--HHhCccccCCccCCCCC-cCCHHHHHHHHHHHHH
Confidence 22333333322111 111 33689999999998665 5999999999999999
Q ss_pred hcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecC----CeEE-EecChhHHH
Q 000523 339 VGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD----GQIV-YQGPRELVL 413 (1445)
Q Consensus 339 ~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~----G~iv-~~G~~~~~~ 413 (1445)
+++|+||+||||||+||+.++..|.+.|++.....++|+|+ +.|.. ++.+.||+|++|++ |+++ ++|++++++
T Consensus 1374 lr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIi-IaHRl-sti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl 1451 (1466)
T PTZ00265 1374 LREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIIT-IAHRI-ASIKRSDKIVVFNNPDRTGSFVQAHGTHEELL 1451 (1466)
T ss_pred hcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEE-EechH-HHHHhCCEEEEEeCCCCCCCEEEEecCHHHHH
Confidence 99999999999999999999999999998864223455555 45543 66788999999999 9955 899999986
Q ss_pred H
Q 000523 414 E 414 (1445)
Q Consensus 414 ~ 414 (1445)
+
T Consensus 1452 ~ 1452 (1466)
T PTZ00265 1452 S 1452 (1466)
T ss_pred h
Confidence 4
No 224
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=9.9e-36 Score=385.84 Aligned_cols=256 Identities=22% Similarity=0.344 Sum_probs=190.6
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.++.....+|+.+.++.+++. .+. .....+.....|+|+||++.++.
T Consensus 444 ~~~~~~a~~ri~~~l~~~~~~-----~~~-~~~~~~~~~~~I~~~nVsf~Y~~--------------------------- 490 (711)
T TIGR00958 444 MMQAVGASEKVFEYLDRKPNI-----PLT-GTLAPLNLEGLIEFQDVSFSYPN--------------------------- 490 (711)
T ss_pred HHHHHHHHHHHHHHhCCCCCC-----CCC-CCCCCCCCCCeEEEEEEEEECCC---------------------------
Confidence 567777888888887765441 100 00000112346999999999842
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1445)
+ +++++|+|+|++++|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|+
T Consensus 491 ---~-~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~ 563 (711)
T TIGR00958 491 ---R-PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQE 563 (711)
T ss_pred ---C-CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecC
Confidence 0 1235999999999999999999999999999999999999998 9999999999877654 4789999997
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
+.++ +.|++|||.++..- ...+.+.++++. ++ .++.+ -.|+++.||
T Consensus 564 ~~lF-~gTIreNI~~g~~~----~~~e~i~~al~~---a~------------------------l~~~i--~~lp~GldT 609 (711)
T TIGR00958 564 PVLF-SGSVRENIAYGLTD----TPDEEIMAAAKA---AN------------------------AHDFI--MEFPNGYDT 609 (711)
T ss_pred cccc-ccCHHHHHhcCCCC----CCHHHHHHHHHH---cC------------------------CHHHH--HhCCCccCC
Confidence 7555 57999999986321 111122221111 11 01112 236778899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.+|+.+ ..||||||||++||||++++|+|++||||||+||+.++..+.+ ... ..++|+|+ ++|.. ++.+.+|+
T Consensus 610 ~ige~G-~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~~~~TvIi-ItHrl-~~i~~aD~ 682 (711)
T TIGR00958 610 EVGEKG-SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---RASRTVLL-IAHRL-STVERADQ 682 (711)
T ss_pred cccCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---cCCCeEEE-EeccH-HHHHhCCE
Confidence 999765 4699999999999999999999999999999999999999988 221 23445444 55554 45678999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|+|+++|+++++.+
T Consensus 683 IivL~~G~ive~Gt~~eL~~ 702 (711)
T TIGR00958 683 ILVLKKGSVVEMGTHKQLME 702 (711)
T ss_pred EEEEECCEEEEeeCHHHHHh
Confidence 99999999999999999865
No 225
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=6.9e-35 Score=329.38 Aligned_cols=212 Identities=26% Similarity=0.380 Sum_probs=176.5
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++++. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcc
Confidence 45677776653 2469999999999999999999999999999999999875 45899999998754
Q ss_pred cc--cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000523 927 QE--TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 927 ~~--~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1445)
.. ...+.++|++|++.+++.+|++|++.+.+..+ ........+.++++++.++|.+..+.. +..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDK-----VRELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCC-----hhhCCHHHH
Confidence 21 22357999999988888999999998765433 122333445678899999998776665 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
||++||++|+.+|++++|||||+|||+.++..+.+.|+++++ +|+|||+++|+++. + +.+|++++|++ |++++.|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999975 58999999999863 4 45999999985 78998887
Q ss_pred C
Q 000523 1084 L 1084 (1445)
Q Consensus 1084 ~ 1084 (1445)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 4
No 226
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=3.6e-35 Score=325.38 Aligned_cols=194 Identities=27% Similarity=0.407 Sum_probs=164.3
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-CccceEEEEcCCCCCCCCCCHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-VPQRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.+++.+||+
T Consensus 14 ~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (208)
T cd03268 14 RVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTAR 90 (208)
T ss_pred EeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcHH
Confidence 4999999999999999999999999999999999999998 99999999887542 1235799999998888899999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.+.....+. ....++++++.+||++..++.+ +.|
T Consensus 91 e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~L 127 (208)
T cd03268 91 ENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKV-----KGF 127 (208)
T ss_pred HHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhH-----hhC
Confidence 999886432110 0113456788899987666544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1445)
||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+ . +.+++.++|+..++.+.+|++++|++|+++
T Consensus 128 S~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~v~~l~~g~i~ 205 (208)
T cd03268 128 SLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-Q-GITVLISSHLLSEIQKVADRIGIINKGKLI 205 (208)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998764 3 445566788888999999999999999998
Q ss_pred Eec
Q 000523 405 YQG 407 (1445)
Q Consensus 405 ~~G 407 (1445)
+.|
T Consensus 206 ~~g 208 (208)
T cd03268 206 EEG 208 (208)
T ss_pred ecC
Confidence 765
No 227
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.6e-35 Score=327.80 Aligned_cols=198 Identities=31% Similarity=0.454 Sum_probs=166.1
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 5999999999999999999999999999999999999998 999999999875421 24679999999988888999
Q ss_pred HHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccccc
Q 000523 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1445)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1445)
+||+.+..+..+... .+....++++++.+||++..+..+ +.
T Consensus 96 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (218)
T cd03266 96 RENLEYFAGLYGLKG----------------------------------DELTARLEELADRLGMEELLDRRV-----GG 136 (218)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhhhh-----hh
Confidence 999987643321100 011234567889999987666544 46
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000523 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1445)
Q Consensus 324 LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1445)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.+.+|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-L-GKCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 44566678888899999999999999999
Q ss_pred EEec
Q 000523 404 VYQG 407 (1445)
Q Consensus 404 v~~G 407 (1445)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8765
No 228
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-35 Score=339.76 Aligned_cols=217 Identities=22% Similarity=0.326 Sum_probs=179.2
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|..+ +..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i~ 72 (286)
T PRK13646 3 IRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITIT 72 (286)
T ss_pred EEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 67888888874210 011359999999999999999999999999999999999876 45899999998763
Q ss_pred c-------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000523 927 Q-------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 996 (1445)
Q Consensus 927 ~-------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 996 (1445)
. ...++.+|||+|++ .+++ .||.|++.|..... ..+..+.++.++++++.+||. +..++. +
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (286)
T PRK13646 73 HKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----P 143 (286)
T ss_pred cccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 13466799999986 3444 59999999865332 233445556788999999996 566654 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecC
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~g 1075 (1445)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ ++.+.+|++++|++
T Consensus 144 ~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~- 221 (286)
T PRK13646 144 FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE- 221 (286)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 67999999999999999999999999999999999999999999999975 4899999999986 57788999999985
Q ss_pred cEEEEEcCC
Q 000523 1076 GQEIYVGPL 1084 (1445)
Q Consensus 1076 G~~~y~G~~ 1084 (1445)
|++++.|+.
T Consensus 222 G~i~~~g~~ 230 (286)
T PRK13646 222 GSIVSQTSP 230 (286)
T ss_pred CEEEEECCH
Confidence 799999985
No 229
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-35 Score=306.17 Aligned_cols=216 Identities=27% Similarity=0.393 Sum_probs=182.6
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++.+|++|++. .+.+|++||++++|||++||+||||||||||||+|+|... +.+|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~--p~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELS--PDSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccC--CCCCeEeeCCcChh
Confidence 45678888874 3579999999999999999999999999999999999876 45899999999876
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000523 927 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1003 (1445)
Q Consensus 927 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1445)
+ ...++..+..||+..+....||+|-+.++..-... .....+..+.++++|...++.++.... ...|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRD-----YRTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccc-----hhhcCchH
Confidence 4 34567779999998887778999999997532211 112223344578899999999887765 35799999
Q ss_pred HHHHHHHHHHhh------CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 1004 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 1004 rqRl~iA~~L~~------~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
||||.+||.|+. ++++||||||||.||...+..++++.|++++.|..|+++.||.+. ...++||+++|++ |+
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-Ce
Confidence 999999999986 456999999999999999999999999999999999999999985 6678999999985 89
Q ss_pred EEEEcCCC
Q 000523 1078 EIYVGPLG 1085 (1445)
Q Consensus 1078 ~~y~G~~~ 1085 (1445)
++..|++.
T Consensus 219 v~a~g~p~ 226 (259)
T COG4559 219 VIASGSPQ 226 (259)
T ss_pred EeecCCHH
Confidence 99999974
No 230
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-35 Score=333.13 Aligned_cols=206 Identities=21% Similarity=0.277 Sum_probs=176.3
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|+++++. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 488999988773 2359999999999999999999999999999999999875 4589999999764
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000523 926 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1005 (1445)
Q Consensus 926 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1445)
. ..++.++|++|++.+++.+||+||+.+... . ..++.+.++++.++|.+..+.. +..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~----~-----~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK----G-----QWRDAALQALAAVGLADRANEW-----PAALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc----c-----hHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHH
Confidence 3 245679999999988888999999987421 0 1234578899999998776665 3579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1006 Rl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ .+.+.+|++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999986 47788999999985 789888774
No 231
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.7e-36 Score=361.91 Aligned_cols=217 Identities=26% Similarity=0.412 Sum_probs=183.1
Q ss_pred CCceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcC
Q 000523 843 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 922 (1445)
Q Consensus 843 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g 922 (1445)
-...++|+||++.|+.. ++.++|+|+||+|+|||.|||+||||+||||+.++|.+..+ +.+|+|.+||
T Consensus 462 ~~G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG 529 (716)
T KOG0058|consen 462 LQGVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDG 529 (716)
T ss_pred ccceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECC
Confidence 34579999999999864 34679999999999999999999999999999999998776 5689999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHH-----HHHHHHHcCCcccccccccCC
Q 000523 923 YPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMF-----IDEVMELVELNPLRQSLVGLP 994 (1445)
Q Consensus 923 ~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~-----v~~~l~~l~L~~~~~~~vg~~ 994 (1445)
+|+.+ ..+++.+|+|.|+|.+|. -||+||+.|+.. ..+.++.... +.+-+ .++.+-.||.||..
T Consensus 530 ~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~i~~AAk~ANah~FI--~~~p~gY~T~VGEk 601 (716)
T KOG0058|consen 530 VPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEEIEAAAKMANAHEFI--TNFPDGYNTVVGEK 601 (716)
T ss_pred eehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHHHHHHHHHhChHHHH--HhCccccccccCCc
Confidence 99765 456789999999999986 599999999753 3333332221 22222 25566789999987
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec
Q 000523 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
|. .||||||||++|||||++||+||+|||.||.||+++...|.++|.+..+ ++|||++.|+.| ..+.+|+|+++++
T Consensus 602 G~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~ 677 (716)
T KOG0058|consen 602 GS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK 677 (716)
T ss_pred cc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC
Confidence 64 7999999999999999999999999999999999999999999988765 699999999986 5788999999986
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|+++..|.-
T Consensus 678 -G~V~E~G~h 686 (716)
T KOG0058|consen 678 -GRVVEMGTH 686 (716)
T ss_pred -CeEEecccH
Confidence 899999853
No 232
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-35 Score=337.13 Aligned_cols=215 Identities=27% Similarity=0.399 Sum_probs=174.2
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCC-CCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1445)
++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.+
T Consensus 21 ~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~~ 97 (279)
T PRK13635 21 YALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVGA 97 (279)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhcccc
Confidence 4899999999999999999999999999999999999998 9999999998865432 357999999863 67778
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||.||+.++.+..+.. ..+....++++++.+||++..++.+
T Consensus 98 tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~----- 138 (279)
T PRK13635 98 TVQDDVAFGLENIGVP----------------------------------REEMVERVDQALRQVGMEDFLNREP----- 138 (279)
T ss_pred cHHHHHhhhHhhCCCC----------------------------------HHHHHHHHHHHHHHcCChhhhhCCc-----
Confidence 9999998865432110 0011234677889999987766554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|+.++|+..++. .+|+|++|++|
T Consensus 139 ~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~~~~tilivsH~~~~~~-~~d~i~~l~~G 216 (279)
T PRK13635 139 HRLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKE-QKGITVLSITHDLDEAA-QADRVIVMNKG 216 (279)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cCCCEEEEEecCHHHHH-cCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998764 33455555677777776 59999999999
Q ss_pred eEEEecChhHHHH---HHHhcCCCCC
Q 000523 402 QIVYQGPRELVLE---FFASMGFRCP 424 (1445)
Q Consensus 402 ~iv~~G~~~~~~~---~f~~lG~~cp 424 (1445)
++++.|+.+++.. .+...|..+|
T Consensus 217 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 217 EILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred EEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 9999999988753 2334444443
No 233
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=6.5e-35 Score=326.47 Aligned_cols=211 Identities=25% Similarity=0.323 Sum_probs=172.0
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+... .+.+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 4567777766311 012469999999999999999999999999999999999876 45899999998754
Q ss_pred cc---c---cc-ceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000523 927 QE---T---FA-RISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 999 (1445)
Q Consensus 927 ~~---~---~~-~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 999 (1445)
.. . ++ +.++|++|++.+++.+|++|++.+....+. ....+..+.+.++++.+++.+..+.. +..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHR-----PSEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhC
Confidence 21 1 22 569999999988889999999988654331 22233345678899999998776665 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEE
Q 000523 1000 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1078 (1445)
Q Consensus 1000 SgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~ 1078 (1445)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ .+ +.+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999999764 899999999986 34 55799999986 665
Q ss_pred E
Q 000523 1079 I 1079 (1445)
Q Consensus 1079 ~ 1079 (1445)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 4
No 234
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6.7e-35 Score=330.42 Aligned_cols=204 Identities=21% Similarity=0.347 Sum_probs=170.3
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC-----ccceEEEEcCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHIGE 240 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~~~ 240 (1445)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.
T Consensus 15 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (240)
T PRK09493 15 QVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPH 91 (240)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCCC
Confidence 4999999999999999999999999999999999999998 999999999875421 13579999999888889
Q ss_pred CCHHHHHHHhHHh-cCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 241 MTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 241 lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
+||+||+.++... .+.. ..+....++++++.+||++..|..+
T Consensus 92 ~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~~--- 134 (240)
T PRK09493 92 LTALENVMFGPLRVRGAS----------------------------------KEEAEKQARELLAKVGLAERAHHYP--- 134 (240)
T ss_pred CcHHHHHHhHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCChHHHhcCh---
Confidence 9999999875421 1100 0011123567888999986666544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
+.|||||||||+||++|+.+|++++|||||+|||..++..+.+.|+++.. . +++++.++|+..++.+++|++++|+
T Consensus 135 --~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 210 (240)
T PRK09493 135 --SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-E-GMTMVIVTHEIGFAEKVASRLIFID 210 (240)
T ss_pred --hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998753 3 4556667888889999999999999
Q ss_pred CCeEEEecChhHHH
Q 000523 400 DGQIVYQGPRELVL 413 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1445)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~g~~~~~~ 224 (240)
T PRK09493 211 KGRIAEDGDPQVLI 224 (240)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999988764
No 235
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.5e-35 Score=326.22 Aligned_cols=193 Identities=26% Similarity=0.380 Sum_probs=163.2
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc---ccccceEEEeccCCC-CCCCC
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDI-HSPFV 947 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~-~~~~l 947 (1445)
+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 469999999999999999999999999999999999875 458999999987542 234567999999974 36678
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000523 948 TIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1027 (1445)
Q Consensus 948 Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTs 1027 (1445)
|++|++.+....+ .......++.++++++.++|.+..+.. +..||||||||++|||+|+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRS-----PFTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998765332 122333345678899999998766655 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecC
Q 000523 1028 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1445)
Q Consensus 1028 gLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~g 1075 (1445)
|||+.++..+.+.|++++++|+|||+++|++. ++...+|++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999986 577789999999864
No 236
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-35 Score=322.25 Aligned_cols=195 Identities=41% Similarity=0.733 Sum_probs=166.4
Q ss_pred eEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhhcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHH
Q 000523 118 EVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLA 197 (1445)
Q Consensus 118 ~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~ 197 (1445)
.+.|+||++.++.. +.++.+|+|+|+++++|++++|+|||||||||||++
T Consensus 3 ~~~~~~~~~~~~~~------------------------------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~ 52 (202)
T cd03233 3 TLSWRNISFTTGKG------------------------------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKA 52 (202)
T ss_pred eEEEEccEEEeccC------------------------------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHH
Confidence 47899999998541 133469999999999999999999999999999999
Q ss_pred HhCCCC---CCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHH
Q 000523 198 LAGKLD---PTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKA 272 (1445)
Q Consensus 198 L~G~~~---~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~ 272 (1445)
|+|.++ |+ +|+|.++|+++.... .++.++|++|++.+++.+||+||+.++.+..
T Consensus 53 l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~------------------ 111 (202)
T cd03233 53 LANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK------------------ 111 (202)
T ss_pred hcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc------------------
Confidence 999998 66 999999999876532 2467999999998999999999998753210
Q ss_pred cCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCC
Q 000523 273 AGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEIST 352 (1445)
Q Consensus 273 ~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEpts 352 (1445)
.++.+..||||||||++||++|+.+|++++|||||+
T Consensus 112 --------------------------------------------~~~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~ 147 (202)
T cd03233 112 --------------------------------------------GNEFVRGISGGERKRVSIAEALVSRASVLCWDNSTR 147 (202)
T ss_pred --------------------------------------------cccchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCc
Confidence 112334699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEec
Q 000523 353 GLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1445)
Q Consensus 353 gLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1445)
|||+.++..+.+.|+++....+.++|+++||+.+++.+.+|++++|++|++++.|
T Consensus 148 ~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 148 GLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred cCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 9999999999999998765335677777788888999999999999999998765
No 237
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=5.9e-35 Score=333.03 Aligned_cols=204 Identities=25% Similarity=0.376 Sum_probs=170.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-----------CccceEEEEcCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-----------VPQRTAAYISQH 234 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----------~~~~~~~yv~Q~ 234 (1445)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++|++|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 4899999999999999999999999999999999999998 99999999887532 123579999999
Q ss_pred CCCCCCCCHHHHHHHhHHh-cCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccc
Q 000523 235 DNHIGEMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1445)
+.+++.+||+||+.++... .+. . ..+....++++++.+||++..|
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~~l~~~gl~~~~~ 139 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVKGE--P--------------------------------KEEATARARELLAKVGLAGKET 139 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhcCC--C--------------------------------HHHHHHHHHHHHHHcCCcchhh
Confidence 8888899999999875421 110 0 0011223566788899987666
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcC
Q 000523 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1445)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1445)
+. ++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.+++|
T Consensus 140 ~~-----~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~tH~~~~~~~~~d 212 (250)
T PRK11264 140 SY-----PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-E-KRTMVIVTHEMSFARDVAD 212 (250)
T ss_pred CC-----hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcC
Confidence 54 446999999999999999999999999999999999999999999998754 3 4456667888889999999
Q ss_pred eEEEecCCeEEEecChhHHH
Q 000523 394 DIILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~ 413 (1445)
++++|++|++++.|+.+++.
T Consensus 213 ~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 213 RAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 238
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-35 Score=330.83 Aligned_cols=212 Identities=22% Similarity=0.335 Sum_probs=177.0
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-+.++|+++.+. .+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 377888887763 2469999999999999999999999999999999999875 4589999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCcCC
Q 000523 926 KQE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELV-ELNPLRQSLVGLPGVSGLS 1000 (1445)
Q Consensus 926 ~~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~LS 1000 (1445)
... ..++.++|++|+..+++.+||.||+.+..... .....++.++++++.+ ++.+..+.. +..||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS 139 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMS 139 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCC
Confidence 431 23467999999998899899999998764221 1122234466777777 466555543 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++
T Consensus 140 ~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (237)
T PRK11614 140 GGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVL 217 (237)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEe
Confidence 99999999999999999999999999999999999999999999877999999999986 58889999999986 79999
Q ss_pred EcCC
Q 000523 1081 VGPL 1084 (1445)
Q Consensus 1081 ~G~~ 1084 (1445)
.|+.
T Consensus 218 ~~~~ 221 (237)
T PRK11614 218 EDTG 221 (237)
T ss_pred eCCH
Confidence 9986
No 239
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-35 Score=338.11 Aligned_cols=216 Identities=24% Similarity=0.312 Sum_probs=181.5
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-++++|+++.++.. ..+.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 37788888877421 12359999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 926 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 926 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
.. ...++.+||++|++. .++..||+||+.|..... ..+.++.++.++++++.++|.+..+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKERE-----PARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 234567999999973 567789999998865432 234445556789999999998877765 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++ ..+|++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 999999999986 35 57999999985 79999
Q ss_pred EcCC
Q 000523 1081 VGPL 1084 (1445)
Q Consensus 1081 ~G~~ 1084 (1445)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 9985
No 240
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=8.3e-35 Score=332.04 Aligned_cols=213 Identities=23% Similarity=0.312 Sum_probs=179.1
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
+++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 66 (252)
T TIGR03005 2 RFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLYH 66 (252)
T ss_pred EEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccc
Confidence 5677777663 2469999999999999999999999999999999999876 458999999986532
Q ss_pred ----------------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc
Q 000523 928 ----------------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLV 991 (1445)
Q Consensus 928 ----------------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~v 991 (1445)
...++.++|++|++.+++..|+.||+.++..... .......++.++++++.+++.+..+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~- 143 (252)
T TIGR03005 67 MPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVL--GMARAEAEKRAMELLDMVGLADKADHM- 143 (252)
T ss_pred cccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCChhHhhcC-
Confidence 1235679999999999999999999987542211 123344455688999999998776655
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEe
Q 000523 992 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1070 (1445)
Q Consensus 992 g~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~ 1070 (1445)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++...+|+++
T Consensus 144 ----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~ 218 (252)
T TIGR03005 144 ----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVC 218 (252)
T ss_pred ----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEE
Confidence 3579999999999999999999999999999999999999999999998764 899999999986 5778899999
Q ss_pred EEecCcEEEEEcCC
Q 000523 1071 LMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1071 ~l~~gG~~~y~G~~ 1084 (1445)
+|++ |++++.|+.
T Consensus 219 ~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 219 FFDK-GRIVEQGKP 231 (252)
T ss_pred EEEC-CEEEEeCCH
Confidence 9985 799998875
No 241
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=330.52 Aligned_cols=216 Identities=24% Similarity=0.280 Sum_probs=178.1
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEcCc
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 923 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 923 (1445)
+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 67788877653 246999999999999999999999999999999999986531 36899999998
Q ss_pred cCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccCCCC
Q 000523 924 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL----RQSLVGLPGV 996 (1445)
Q Consensus 924 ~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~~~~ 996 (1445)
++.. ..+++.+||++|++.+++.+||.||+.+....+... ....+..+.++++++.++|.+. .+.. +
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 144 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLV-KSKKELQERVRWALEKAQLWDEVKDRLDAP-----A 144 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhcccc-CCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----c
Confidence 7642 234567999999998888999999998865432111 1223344567889999998642 2332 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 221 (250)
T PRK14247 145 GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-G 221 (250)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 67999999999999999999999999999999999999999999999864 899999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 000523 1077 QEIYVGPL 1084 (1445)
Q Consensus 1077 ~~~y~G~~ 1084 (1445)
+++..|+.
T Consensus 222 ~i~~~g~~ 229 (250)
T PRK14247 222 QIVEWGPT 229 (250)
T ss_pred eEEEECCH
Confidence 99999875
No 242
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.8e-35 Score=325.38 Aligned_cols=191 Identities=28% Similarity=0.380 Sum_probs=160.1
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCC-CCCCCCHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDN-HIGEMTVR 244 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV~ 244 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .++.+||+
T Consensus 14 ~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 14 EILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred ceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 4999999999999999999999999999999999999998 9999999988754333467999999864 35578999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.++....+ . ....++++++.+||++..++.+ +.|
T Consensus 91 e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~L 127 (205)
T cd03226 91 EELLLGLKELD--A------------------------------------GNEQAETVLKDLDLYALKERHP-----LSL 127 (205)
T ss_pred HHHhhhhhhcC--c------------------------------------cHHHHHHHHHHcCCchhcCCCc-----hhC
Confidence 99987542210 0 0123466788999987766554 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1445)
|||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ . +.+++.++|+..++.+++|++++|++|+++
T Consensus 128 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 128 SGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-Q-GKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999999999999999999998754 3 445666788888899999999999999975
No 243
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-35 Score=349.38 Aligned_cols=207 Identities=24% Similarity=0.331 Sum_probs=175.7
Q ss_pred cceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCCC
Q 000523 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDN 236 (1445)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1445)
...+|+|+|+++++||+++|+|||||||||||++|+|+++|+ +|+|.++|.++..... ++.++||+|++.
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 345899999999999999999999999999999999999998 9999999998865432 247999999999
Q ss_pred CCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccc
Q 000523 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1445)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1445)
+++.+||+||+.|+.+..+... .+....++++++.+||++..+..+
T Consensus 117 l~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~~ 162 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSYP 162 (400)
T ss_pred CCCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcCc
Confidence 9999999999998765432110 001124567899999987666544
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000523 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1445)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1445)
+.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.... +++|+.++|+..++.+++|+|+
T Consensus 163 -----~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~-g~TIIivTHd~~~~~~~~Dri~ 236 (400)
T PRK10070 163 -----DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKH-QRTIVFISHDLDEAMRIGDRIA 236 (400)
T ss_pred -----ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHC-CCeEEEEECCHHHHHHhCCEEE
Confidence 4699999999999999999999999999999999999999999999875433 4556668888999999999999
Q ss_pred EecCCeEEEecChhHHH
Q 000523 397 LLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1445)
+|++|++++.|+++++.
T Consensus 237 vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 237 IMQNGEVVQVGTPDEIL 253 (400)
T ss_pred EEECCEEEecCCHHHHH
Confidence 99999999999988774
No 244
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=8.8e-35 Score=342.06 Aligned_cols=214 Identities=21% Similarity=0.246 Sum_probs=175.8
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCC--
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHD-- 235 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d-- 235 (1445)
..+|+|||++|++||+++|+|+||||||||+++|+|.++|+...+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 459999999999999999999999999999999999998842238999999999865432 14799999987
Q ss_pred CCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccc
Q 000523 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1445)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1445)
.+.+.+||.+++.+.....+. .. ..+....+.++++.+||++..+.
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~-~~--------------------------------~~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKG-MS--------------------------------KAEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcC-CC--------------------------------HHHHHHHHHHHHHHcCCCChHHH-
Confidence 688999999999875433210 00 00112345677889999754322
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
. ++.+..|||||||||+||+||+.+|++|++||||+|||..++.++.+.|+++.+ ..+++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKR-EFNTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-HcCCEEEEEECCHHHHHHhCCEE
Confidence 2 356678999999999999999999999999999999999999999999998865 33566777899999999999999
Q ss_pred EEecCCeEEEecChhHHHH
Q 000523 396 ILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1445)
++|++|+|++.|+.+++.+
T Consensus 233 ~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999998853
No 245
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.1e-34 Score=341.09 Aligned_cols=229 Identities=21% Similarity=0.233 Sum_probs=184.2
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-++++|++.+++............+...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~--p~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVK--ATDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCCcEEEECCEEC
Confidence 47888988777532100000000123569999999999999999999999999999999999876 4589999999876
Q ss_pred Ccc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000523 926 KQE------TFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 996 (1445)
Q Consensus 926 ~~~------~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 996 (1445)
... .+++.++||+|++ .++|.+||.|++.+...... ...+.++.++.+.++++.++|. +..+.. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~-~~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYH-PKLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhc-cCCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 431 2456799999997 57889999999988654321 1234455666788999999995 344444 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecC
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~g 1075 (1445)
..||||||||++||+||+.+|++|++||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 679999999999999999999999999999999999999999999999764 899999999986 47788999999985
Q ss_pred cEEEEEcCC
Q 000523 1076 GQEIYVGPL 1084 (1445)
Q Consensus 1076 G~~~y~G~~ 1084 (1445)
|+++..|+.
T Consensus 238 G~ive~g~~ 246 (331)
T PRK15079 238 GHAVELGTY 246 (331)
T ss_pred CEEEEEcCH
Confidence 799999985
No 246
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=7e-35 Score=327.16 Aligned_cols=202 Identities=33% Similarity=0.522 Sum_probs=163.5
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC---CCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD---PTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEM 241 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1445)
+++|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.+
T Consensus 20 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPGL 96 (226)
T ss_pred cccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcCC
Confidence 459999999999999999999999999999999999998 77 999999998875433457799999999899999
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHH-HHHHcCCcccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDY-YLKVLGLDVCADTMVGDEM 320 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~~ 320 (1445)
||+||+.|+.......... .. .....++. .++.+++++..++ .
T Consensus 97 tv~enl~~~~~~~~~~~~~---~~----------------------------~~~~~~~~~~l~~~~l~~~~~~-----~ 140 (226)
T cd03234 97 TVRETLTYTAILRLPRKSS---DA----------------------------IRKKRVEDVLLRDLALTRIGGN-----L 140 (226)
T ss_pred cHHHHHHHHHHhhcccccc---hH----------------------------HHHHHHHHHHHHhhcchhhhcc-----c
Confidence 9999999875432210000 00 00011233 6778888765554 4
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCc-hhHHhhcCeEEEec
Q 000523 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPA-PETYDLFDDIILLS 399 (1445)
Q Consensus 321 ~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~-~~~~~~~D~iilL~ 399 (1445)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|+ ++|+. .++.+.+|++++|+
T Consensus 141 ~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~~tiii-~sh~~~~~~~~~~d~i~~l~ 218 (226)
T cd03234 141 VKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RNRIVIL-TIHQPRSDLFRLFDRILLLS 218 (226)
T ss_pred ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEE-EecCCCHHHHHhCCEEEEEe
Confidence 456999999999999999999999999999999999999999999998754 3455555 45554 68999999999999
Q ss_pred CCeEEEec
Q 000523 400 DGQIVYQG 407 (1445)
Q Consensus 400 ~G~iv~~G 407 (1445)
+|+++++|
T Consensus 219 ~G~i~~~g 226 (226)
T cd03234 219 SGEIVYSG 226 (226)
T ss_pred CCEEEecC
Confidence 99999876
No 247
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-35 Score=324.79 Aligned_cols=196 Identities=30% Similarity=0.452 Sum_probs=165.3
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC--ccceEEEEcCCCCCCCCCCH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--PQRTAAYISQHDNHIGEMTV 243 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1445)
++|+|+|+++++| +++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 14 RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 4999999999999 99999999999999999999999998 999999998875432 24679999999988999999
Q ss_pred HHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccccc
Q 000523 244 RETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRG 323 (1445)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1445)
+||+.+..+..+... .+....++++++.+||++..++.+ ..
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (211)
T cd03264 90 REFLDYIAWLKGIPS----------------------------------KEVKARVDEVLELVNLGDRAKKKI-----GS 130 (211)
T ss_pred HHHHHHHHHHhCCCH----------------------------------HHHHHHHHHHHHHCCCHHHHhCch-----hh
Confidence 999988654321100 001123567888999987666655 45
Q ss_pred CChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeE
Q 000523 324 ISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1445)
Q Consensus 324 LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~i 403 (1445)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. + ++++.++|+..++.+++|++++|++|++
T Consensus 131 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~i 207 (211)
T cd03264 131 LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGKL 207 (211)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998753 3 5666688888889999999999999999
Q ss_pred EEec
Q 000523 404 VYQG 407 (1445)
Q Consensus 404 v~~G 407 (1445)
++.|
T Consensus 208 ~~~g 211 (211)
T cd03264 208 VFEG 211 (211)
T ss_pred EecC
Confidence 8765
No 248
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-35 Score=332.63 Aligned_cols=217 Identities=22% Similarity=0.269 Sum_probs=179.2
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 377888887663 2469999999999999999999999999999999999865 4689999999876
Q ss_pred Ccc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC----------CCC--CHHHHHHHHHHHHHHcCCcccccc
Q 000523 926 KQE---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLS----------PEV--DSETRKMFIDEVMELVELNPLRQS 989 (1445)
Q Consensus 926 ~~~---~-~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~----------~~~--~~~~~~~~v~~~l~~l~L~~~~~~ 989 (1445)
... . .+..++|++|++.+++.+||+||+.+....... ... ...+..+.++++++.+++.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233489999999999999999999986431110 000 111233457888999999876666
Q ss_pred cccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhce
Q 000523 990 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1068 (1445)
Q Consensus 990 ~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~ 1068 (1445)
. +..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|+
T Consensus 150 ~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 Q-----AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 5 3579999999999999999999999999999999999999999999999775 899999999986 57788999
Q ss_pred EeEEecCcEEEEEcCC
Q 000523 1069 LFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1069 v~~l~~gG~~~y~G~~ 1084 (1445)
+++|++ |++++.|+.
T Consensus 224 i~~l~~-g~i~~~~~~ 238 (255)
T PRK11300 224 IYVVNQ-GTPLANGTP 238 (255)
T ss_pred EEEEEC-CeEEecCCH
Confidence 999985 799999986
No 249
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=330.82 Aligned_cols=221 Identities=24% Similarity=0.249 Sum_probs=178.5
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1445)
.++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (253)
T PRK14267 4 AIETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFG 70 (253)
T ss_pred eEEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 367888887763 235999999999999999999999999999999999986532 3589999999
Q ss_pred ccCC-----cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 923 YPKK-----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 923 ~~~~-----~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.++. ...+++.++|++|++.+++.+||.||+.+....+.. ....+..++.++++++.+++.+........ .+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 148 (253)
T PRK14267 71 RNIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRLND-YPS 148 (253)
T ss_pred EEccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhhcc-Chh
Confidence 8763 123456799999999999999999999886543311 112333445678899999885321111111 146
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 149 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~ 225 (253)
T PRK14267 149 NLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLYL-GK 225 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 699999999986 57788999999985 79
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
+++.|+.
T Consensus 226 i~~~~~~ 232 (253)
T PRK14267 226 LIEVGPT 232 (253)
T ss_pred EEEeCCH
Confidence 9999885
No 250
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=329.25 Aligned_cols=213 Identities=23% Similarity=0.316 Sum_probs=178.5
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 56788877663 2369999999999999999999999999999999999875 45899999998642
Q ss_pred ---------cccccceEEEeccCCCCCCCCCHHHHHHHH-HHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000523 927 ---------QETFARISGYCEQNDIHSPFVTIYESLLFS-AWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 996 (1445)
Q Consensus 927 ---------~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~-~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1445)
....++.++|++|++.+++.+||.||+.+. .... .....+..+.+.++++.+|+.+..+.. +
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~ 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRF-----P 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----h
Confidence 012345799999999999999999999753 2221 122333445678899999998776665 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999998777999999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 000523 1077 QEIYVGPL 1084 (1445)
Q Consensus 1077 ~~~y~G~~ 1084 (1445)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (242)
T PRK11124 218 HIVEQGDA 225 (242)
T ss_pred EEEEeCCH
Confidence 99999875
No 251
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-35 Score=336.70 Aligned_cols=206 Identities=26% Similarity=0.357 Sum_probs=170.5
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCC--c---CccceEEEEcCCCC-CCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE--F---VPQRTAAYISQHDN-HIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~~ 239 (1445)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .++
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~ 96 (283)
T PRK13636 20 HALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQLF 96 (283)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhhc
Confidence 4999999999999999999999999999999999999998 9999999998741 1 12367999999863 345
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
..||+||+.++....+... .+....++++++.+||.+..|+.
T Consensus 97 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~---- 138 (283)
T PRK13636 97 SASVYQDVSFGAVNLKLPE----------------------------------DEVRKRVDNALKRTGIEHLKDKP---- 138 (283)
T ss_pred cccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhCC----
Confidence 6899999988653221100 01122467788999998766654
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.+.||++++|+
T Consensus 139 -~~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvsH~~~~~~~~~dri~~l~ 216 (283)
T PRK13636 139 -THCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKE-LGLTIIIATHDIDIVPLYCDNVFVMK 216 (283)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 4469999999999999999999999999999999999999999999987653 24556667888889999999999999
Q ss_pred CCeEEEecChhHHHH
Q 000523 400 DGQIVYQGPRELVLE 414 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1445)
+|++++.|+.+++..
T Consensus 217 ~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 217 EGRVILQGNPKEVFA 231 (283)
T ss_pred CCEEEEeCCHHHHhc
Confidence 999999999988754
No 252
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-35 Score=337.39 Aligned_cols=218 Identities=24% Similarity=0.295 Sum_probs=179.0
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+.... ...+.+|+|||++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13641 3 IKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHIT 72 (287)
T ss_pred EEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 56788887764110 001359999999999999999999999999999999999876 46899999998753
Q ss_pred c-------ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000523 927 Q-------ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 997 (1445)
Q Consensus 927 ~-------~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1445)
. ...++.+||++|++. .+..+||.|++.|..... ....++.+++++++++.++|. +..+.. ++
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (287)
T PRK13641 73 PETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKS-----PF 144 (287)
T ss_pred cccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCC-----cc
Confidence 2 123457999999963 233589999998865432 123444556788999999997 566665 45
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+
T Consensus 145 ~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G~ 222 (287)
T PRK13641 145 ELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-GK 222 (287)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999777999999999986 57889999999985 79
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13641 223 LIKHASP 229 (287)
T ss_pred EEEeCCH
Confidence 9999885
No 253
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-35 Score=335.92 Aligned_cols=213 Identities=23% Similarity=0.320 Sum_probs=178.2
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.++ +++.+|+|||++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 45677776653 12359999999999999999999999999999999999876 46899999998764
Q ss_pred c----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 927 Q----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 927 ~----~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
. ...++.+||++|++. .+...|+.||+.+..... ..+..+.++.++++++.++|.+..+.. +..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRS-----PKTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCC-----cccCCH
Confidence 2 234567999999975 356689999998865332 123444456688999999998877765 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
|||||++||++|+.+|+||+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++ +.+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 45 66999999986 799999
Q ss_pred cCC
Q 000523 1082 GPL 1084 (1445)
Q Consensus 1082 G~~ 1084 (1445)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 985
No 254
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.2e-34 Score=329.20 Aligned_cols=218 Identities=22% Similarity=0.250 Sum_probs=175.1
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
+++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~ 68 (243)
T TIGR01978 2 KIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLE 68 (243)
T ss_pred eEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCC
Confidence 4677776653 246999999999999999999999999999999999974112468999999987543
Q ss_pred c---cc-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCC--C--CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCc
Q 000523 928 E---TF-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLS--P--EVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSG 998 (1445)
Q Consensus 928 ~---~~-~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~--~--~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~ 998 (1445)
. .. +..++|++|++.+++.+|++|++.+....... . ..+..+..+.++++++.++|. +..+..++ ..
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~ 144 (243)
T TIGR01978 69 LEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EG 144 (243)
T ss_pred CCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cC
Confidence 1 12 23489999999999999999999876432211 0 112233345678899999997 35554421 24
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-hceEeEEecCcE
Q 000523 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGGQ 1077 (1445)
Q Consensus 999 LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~-fD~v~~l~~gG~ 1077 (1445)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ .+... +|++++|++ |+
T Consensus 145 LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G~ 222 (243)
T TIGR01978 145 FSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-GR 222 (243)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999877899999999986 46666 799999985 79
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
+++.|+.
T Consensus 223 i~~~g~~ 229 (243)
T TIGR01978 223 IVKSGDV 229 (243)
T ss_pred EEEecCH
Confidence 9999875
No 255
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=330.84 Aligned_cols=215 Identities=21% Similarity=0.239 Sum_probs=176.4
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1445)
-+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 578899988763 235999999999999999999999999999999999976532 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN----PLRQSLVGL 993 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 993 (1445)
.++.. ...++.++|++|++..++ .||+||+.+....+.. ......++.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHGT--KDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87531 234567999999987774 8999999886543211 12233445678889988874 233333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
++.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46799999999999999999999999999999999999999999999996 4799999999987 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000523 1074 RGGQEIYVGPL 1084 (1445)
Q Consensus 1074 ~gG~~~y~G~~ 1084 (1445)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 799999875
No 256
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=335.03 Aligned_cols=214 Identities=25% Similarity=0.366 Sum_probs=179.8
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++++.. ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYSG------------SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeCC------------CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 567888877631 2359999999999999999999999999999999999876 46899999998764
Q ss_pred c---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000523 927 Q---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 927 ~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1445)
. ...++.+||++|++. .+...||.|++.+..... ..+.+..++.++++++.++|.+..++. +..||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRV-----PHHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCCHH
Confidence 3 234567899999963 334679999998765422 233444456688999999998877766 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999765 899999999986 57789999999986 799999
Q ss_pred cCC
Q 000523 1082 GPL 1084 (1445)
Q Consensus 1082 G~~ 1084 (1445)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 985
No 257
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=330.78 Aligned_cols=214 Identities=24% Similarity=0.288 Sum_probs=176.8
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1445)
.++++|+++.+. ++.+|+|+|++|++||++||+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 578889887653 246999999999999999999999999999999999976531 3589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 993 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1445)
.++.. ..+++.++|++|++.+++ .|++||+.+....+ ....+..++.++++++.+++.+ ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 124567999999988877 89999999875432 1233334456788999998843 23332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+++.|+++.+ |+|||+++|++. ++.+.+|++++|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999864 799999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000523 1074 RGGQEIYVGPL 1084 (1445)
Q Consensus 1074 ~gG~~~y~G~~ 1084 (1445)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 5 799999875
No 258
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=330.42 Aligned_cols=200 Identities=26% Similarity=0.380 Sum_probs=167.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... .+.++|++|++.+++.+||+|
T Consensus 15 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~e 89 (255)
T PRK11248 15 PALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQD 89 (255)
T ss_pred eeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHHH
Confidence 4999999999999999999999999999999999999998 99999999987542 345899999988888899999
Q ss_pred HHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCC
Q 000523 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1445)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1445)
|+.++.+..+... .+....++++++.+||++..++.+ ..||
T Consensus 90 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS 130 (255)
T PRK11248 90 NVAFGLQLAGVEK----------------------------------MQRLEIAHQMLKKVGLEGAEKRYI-----WQLS 130 (255)
T ss_pred HHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hhCC
Confidence 9987643221100 001124567889999987666544 4699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec--CCeE
Q 000523 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS--DGQI 403 (1445)
Q Consensus 326 GGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~--~G~i 403 (1445)
|||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.... +++|+.++|+..++..+||+|++|+ +|++
T Consensus 131 gGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l~~~~G~i 209 (255)
T PRK11248 131 GGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQET-GKQVLLITHDIEEAVFMATELVLLSPGPGRV 209 (255)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCCcEE
Confidence 999999999999999999999999999999999999999999875433 4556667888899999999999998 5999
Q ss_pred EEecChh
Q 000523 404 VYQGPRE 410 (1445)
Q Consensus 404 v~~G~~~ 410 (1445)
+..++.+
T Consensus 210 ~~~~~~~ 216 (255)
T PRK11248 210 VERLPLN 216 (255)
T ss_pred EEEecCC
Confidence 9988654
No 259
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.2e-34 Score=325.88 Aligned_cols=201 Identities=27% Similarity=0.364 Sum_probs=162.2
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCC--CC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHD--NH 237 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 237 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 5999999999999999999999999999999999999998 999999999876543 235799999987 46
Q ss_pred CCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc-ccccccc
Q 000523 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMV 316 (1445)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1445)
++.+||+||+.+..+..+.....+ .....++++++.++|. ...+..
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~~~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~- 142 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSKKE--------------------------------ARKEAVLLLLVGVGLPEEVLNRY- 142 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcHHH--------------------------------HHHHHHHHHHHHCCCChhHhhCC-
Confidence 678999999988654321100000 0011124567888885 344443
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000523 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1445)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1445)
+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.. ..+.+|+.++|+..++.+.+|+++
T Consensus 143 ----~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 143 ----PHELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQE-ELGLTLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred ----chhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhcCeEE
Confidence 446999999999999999999999999999999999999999999998764 324455567788888888999999
Q ss_pred EecCCeEEEec
Q 000523 397 LLSDGQIVYQG 407 (1445)
Q Consensus 397 lL~~G~iv~~G 407 (1445)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 260
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=7.6e-35 Score=345.39 Aligned_cols=208 Identities=25% Similarity=0.312 Sum_probs=175.9
Q ss_pred ccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCc----cCCCcCc-------cceEEEE
Q 000523 163 RHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGH----DMDEFVP-------QRTAAYI 231 (1445)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~----~~~~~~~-------~~~~~yv 231 (1445)
....+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|+++|. ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 4567999999999999999999999999999999999999998 999999996 3433221 2479999
Q ss_pred cCCCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccc
Q 000523 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1445)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1445)
+|++.+++.+||+||+.|+....+... .+....++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchh
Confidence 999999999999999999865432210 0112346778999999877
Q ss_pred ccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhh
Q 000523 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1445)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1445)
.|..++ .|||||||||+|||+|+.+|++|+|||||+|||+.++.++.+.|+++.. ..+.+|+.++|+..++.++
T Consensus 158 ~~~~~~-----~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~-~~~~TII~iTHdl~e~~~l 231 (382)
T TIGR03415 158 ADKKPG-----ELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQA-KLNKTIIFVSHDLDEALKI 231 (382)
T ss_pred hcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHh
Confidence 766554 5999999999999999999999999999999999999999999998754 3345666688999999999
Q ss_pred cCeEEEecCCeEEEecChhHHH
Q 000523 392 FDDIILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~ 413 (1445)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999998875
No 261
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=331.41 Aligned_cols=213 Identities=25% Similarity=0.353 Sum_probs=178.0
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+. ++.+|+|+|++|++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 56778877663 2469999999999999999999999999999999999865 45899999998753
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000523 927 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1003 (1445)
Q Consensus 927 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1445)
. ...++.++|++|++.+++.+||+|++.+...... ...+..++.++++++.+++.+..+.. +..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPHG---LSRAEDDALVAAALAQVDLAHLAGRD-----YPQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhcccC---CCcHHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHH
Confidence 2 2234578999999888788999999987543211 11223345678899999998777665 35799999
Q ss_pred HHHHHHHHHHh------hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 1004 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 1004 rqRl~iA~~L~------~~p~illLDEPTsgLD~~~~~~i~~~l~~~~-~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
|||++||++|+ .+|++|+|||||+|||+.++..+.+.|+++. ++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999987 56899999999986 57789999999985 7
Q ss_pred EEEEEcCC
Q 000523 1077 QEIYVGPL 1084 (1445)
Q Consensus 1077 ~~~y~G~~ 1084 (1445)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (258)
T PRK13548 218 RLVADGTP 225 (258)
T ss_pred EEEeeCCH
Confidence 89998885
No 262
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.4e-34 Score=328.24 Aligned_cols=215 Identities=25% Similarity=0.315 Sum_probs=177.8
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.++ ++.+|+|+|++|++||+++|+|+|||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecC
Confidence 56777776653 2469999999999999999999999999999999999865 45899999998754
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC--C---CCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 927 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS--P---EVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 927 ~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~--~---~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.. ..++.++|++|++.+++.+||+||+.+....... . ....+..++.++++++.+++.+..+.. ++
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRL-----AG 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCC-----hh
Confidence 31 1234699999999999999999999886432110 0 011223445688999999998776665 45
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999876 789999999986 57788999999986 78
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
++..|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 9988875
No 263
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-35 Score=322.66 Aligned_cols=194 Identities=25% Similarity=0.345 Sum_probs=164.3
Q ss_pred cceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcc-cccceEEEeccCCCCCCCCCHHHHHHH
Q 000523 877 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-TFARISGYCEQNDIHSPFVTIYESLLF 955 (1445)
Q Consensus 877 ~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f 955 (1445)
|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999876 4589999999876431 234679999999999999999999987
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000523 956 SAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1035 (1445)
Q Consensus 956 ~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~ 1035 (1445)
....+. .. .+..++.++++++.++|.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 94 ~~~~~~--~~-~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGL--KL-TAEDRQAIEVALARVGLAGLEKRL-----PGELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred cccccc--Cc-cHHHHHHHHHHHHHcCCHHHHhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 543211 11 123345678999999998777765 3579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1036 IVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1036 ~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
.+++.|+++++ .|+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 99999999875 4899999999986 57788999999985 7877654
No 264
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=328.97 Aligned_cols=205 Identities=20% Similarity=0.355 Sum_probs=170.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+++.+
T Consensus 17 ~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 93 (241)
T PRK10895 17 RVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRL 93 (241)
T ss_pred EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccC
Confidence 4999999999999999999999999999999999999998 9999999998765432 35699999998888889
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+||+.+..+..+. .. ..+....++++++.+||++..+.. .
T Consensus 94 tv~enl~~~~~~~~~-~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-----~ 135 (241)
T PRK10895 94 SVYDNLMAVLQIRDD-LS--------------------------------AEQREDRANELMEEFHIEHLRDSM-----G 135 (241)
T ss_pred cHHHHHhhhhhcccc-cC--------------------------------HHHHHHHHHHHHHHcCCHHHhhcc-----h
Confidence 999999875432110 00 001123456778899997655543 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
+.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.+.+|++++|++|
T Consensus 136 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiii~sH~~~~~~~~~d~v~~l~~G 213 (241)
T PRK10895 136 QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-S-GLGVLITDHNVRETLAVCERAYIVSQG 213 (241)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEEcCHHHHHHhcCEEEEEeCC
Confidence 56999999999999999999999999999999999999999999988753 3 445555778888999999999999999
Q ss_pred eEEEecChhHHH
Q 000523 402 QIVYQGPRELVL 413 (1445)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1445)
++++.|+++++.
T Consensus 214 ~i~~~~~~~~~~ 225 (241)
T PRK10895 214 HLIAHGTPTEIL 225 (241)
T ss_pred eEEeeCCHHHHh
Confidence 999999988764
No 265
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=339.41 Aligned_cols=208 Identities=20% Similarity=0.259 Sum_probs=174.4
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCC--C
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHD--N 236 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1445)
..+|+|||++|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 46999999999999999999999999999999999999987 9999999998865432 35799999987 5
Q ss_pred CCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcc-ccccc
Q 000523 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTM 315 (1445)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1445)
+.+.+||.+++....+.... .. ..+....+.++++.+||+. ..++
T Consensus 105 l~p~~~v~~~l~~~~~~~~~-~~--------------------------------~~~~~~~~~~~l~~~gL~~~~~~~- 150 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTS-LS--------------------------------AAERREKALAMMAKVGLRPEHYDR- 150 (327)
T ss_pred cCCccCHHHHHHHHHHHccC-CC--------------------------------HHHHHHHHHHHHHHCCCChHHhcC-
Confidence 88899999999875433210 00 0011234678899999963 4454
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
.+..|||||||||+||+||+.+|++|++||||++||..++.+|++.|+++.+ ..+++++.++|+...+.+++|+|
T Consensus 151 ----~p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~-~~g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 151 ----YPHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQ-ELGLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred ----CCccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHhCCEE
Confidence 4457999999999999999999999999999999999999999999998765 33566777899999999999999
Q ss_pred EEecCCeEEEecChhHHHH
Q 000523 396 ILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1445)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999988753
No 266
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=9.6e-35 Score=330.70 Aligned_cols=194 Identities=22% Similarity=0.322 Sum_probs=164.5
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 3899999999999999999999999999999999999998 9999999977543 2467999999988888899999
Q ss_pred HHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCC
Q 000523 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1445)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1445)
|+.++.. . . ....++++++.+||++..+.. +..||
T Consensus 101 nl~~~~~--~---~-----------------------------------~~~~~~~~l~~~gl~~~~~~~-----~~~LS 135 (257)
T PRK11247 101 NVGLGLK--G---Q-----------------------------------WRDAALQALAAVGLADRANEW-----PAALS 135 (257)
T ss_pred HHHhccc--c---h-----------------------------------HHHHHHHHHHHcCChhHhcCC-----hhhCC
Confidence 9987421 0 0 001245678889998766544 44699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEE
Q 000523 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1445)
Q Consensus 326 GGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1445)
|||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+.. +.+|+.++|+..++.+.+|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tviivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQH-GFTVLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999999999999999999999999875433 4455667888888999999999999999999
Q ss_pred ecChh
Q 000523 406 QGPRE 410 (1445)
Q Consensus 406 ~G~~~ 410 (1445)
+|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88754
No 267
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.3e-34 Score=324.00 Aligned_cols=196 Identities=24% Similarity=0.361 Sum_probs=160.2
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNH 237 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1445)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 45999999999999999999999999999999999999998 9999999998765432 1469999999888
Q ss_pred CCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccc
Q 000523 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1445)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1445)
++.+||+||+.+......... .+....+.++++.+||++..+..+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 139 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKSV----------------------------------KEAKERAYEMLEKVGLEHRINHRP- 139 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh-
Confidence 889999999988643211000 001123466788999986666544
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000523 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1445)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1445)
+.|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++.+..+ .+|+.++|+..++. .+|++++
T Consensus 140 ----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 140 ----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELN-TSFLVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHh-hcCEEEE
Confidence 46999999999999999999999999999999999999999999998764334 44555677777765 4799999
Q ss_pred ecCCeEE
Q 000523 398 LSDGQIV 404 (1445)
Q Consensus 398 L~~G~iv 404 (1445)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 268
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.1e-34 Score=326.58 Aligned_cols=201 Identities=26% Similarity=0.358 Sum_probs=165.6
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 14 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (230)
T TIGR03410 14 HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRL 90 (230)
T ss_pred EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCC
Confidence 4999999999999999999999999999999999999998 9999999988765432 35699999999889999
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcC-Ccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LDVCADTMVGDEM 320 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~~ 320 (1445)
||+||+.++....+.. . ....+.+++.++ +++..++ .
T Consensus 91 tv~~~l~~~~~~~~~~----------~---------------------------~~~~~~~l~~~~~l~~~~~~-----~ 128 (230)
T TIGR03410 91 TVEENLLTGLAALPRR----------S---------------------------RKIPDEIYELFPVLKEMLGR-----R 128 (230)
T ss_pred cHHHHHHHHHHhcCcc----------h---------------------------HHHHHHHHHHHHhHHHHhhC-----C
Confidence 9999998865322100 0 001234455554 4443443 3
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000523 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1445)
Q Consensus 321 ~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1445)
++.||||||||++||++|+.+|++++|||||+|||+.++.++.+.|+++.+ ..+++++.++|+..++.+++|+|++|++
T Consensus 129 ~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~~~~d~v~~l~~ 207 (230)
T TIGR03410 129 GGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRA-EGGMAILLVEQYLDFARELADRYYVMER 207 (230)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-cCCcEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 456999999999999999999999999999999999999999999998754 2345566678888899999999999999
Q ss_pred CeEEEecChhHH
Q 000523 401 GQIVYQGPRELV 412 (1445)
Q Consensus 401 G~iv~~G~~~~~ 412 (1445)
|++++.|+.+++
T Consensus 208 g~i~~~~~~~~~ 219 (230)
T TIGR03410 208 GRVVASGAGDEL 219 (230)
T ss_pred CEEEEECCHHHc
Confidence 999999998876
No 269
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=330.86 Aligned_cols=217 Identities=25% Similarity=0.342 Sum_probs=179.2
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 56778877653 2469999999999999999999999999999999999865 45899999998753
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000523 927 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 927 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1445)
. ...++.++|++|+..+++.+|+.|++.++...... ........++.++++++.+++.+..++. +..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRR-----LTDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCC-----cccCCHH
Confidence 2 23445699999998888889999999875311000 0111122345578899999998777765 4579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999998777899999999986 58889999999985 7899998
Q ss_pred CCC
Q 000523 1083 PLG 1085 (1445)
Q Consensus 1083 ~~~ 1085 (1445)
+..
T Consensus 221 ~~~ 223 (255)
T PRK11231 221 TPE 223 (255)
T ss_pred CHH
Confidence 863
No 270
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=336.26 Aligned_cols=205 Identities=24% Similarity=0.354 Sum_probs=169.2
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-------CccceEEEEcCCCC-
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDN- 236 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~- 236 (1445)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 34999999999999999999999999999999999999998 99999999987532 11357999999862
Q ss_pred CCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc-cccccc
Q 000523 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1445)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1445)
.+..+||+||+.|+.+..+.. .++....++++++.+||+ +..++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS----------------------------------EDEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCChhHhhCC
Confidence 344689999998865322110 001122456788999996 445544
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+.||++
T Consensus 143 -----~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 -----PFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-A-GHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEE
Confidence 446999999999999999999999999999999999999999999998743 3 556666889999999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000523 396 ILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1445)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 271
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-34 Score=329.42 Aligned_cols=217 Identities=19% Similarity=0.246 Sum_probs=178.6
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1445)
.+.++|+++.+. .+.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 367888887763 236999999999999999999999999999999999986532 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 993 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1445)
.++.. ...++.++|++|+..+++.+||+||+.+....+. .......++.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87531 2345679999999999999999999988654332 1123344556788999998842 22322
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 467999999999999999999999999999999999999999999999864 689999999986 5778899999997
Q ss_pred c-----CcEEEEEcCC
Q 000523 1074 R-----GGQEIYVGPL 1084 (1445)
Q Consensus 1074 ~-----gG~~~y~G~~ 1084 (1445)
+ .|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 2 4899999885
No 272
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=327.80 Aligned_cols=219 Identities=21% Similarity=0.284 Sum_probs=175.4
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCC---CCCeEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK---TGGYITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~---~~~~~~G~i~i~g 922 (1445)
.++++|+++.+. .+.+|+|+|++|++||+++|+||||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 367788877653 246999999999999999999999999999999999952 2112479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.++.. ...++.++|++|++.+++ .|+.||+.+....+.. ...+..++.++++++.+++.+........ .+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLKE-SAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhhC-Ccc
Confidence 87642 234567999999988776 6999999886543311 12233345678899999986432111111 246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 4799999999987 57788999999985 79
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 9999985
No 273
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=333.47 Aligned_cols=204 Identities=26% Similarity=0.374 Sum_probs=167.7
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC---ccceEEEEcCCCC-CCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.+
T Consensus 23 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (271)
T PRK13632 23 NALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIGA 99 (271)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCcc
Confidence 4899999999999999999999999999999999999998 999999999876432 2457999999863 67789
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+||+.++....+.. .++....++++++.+||++..++.+
T Consensus 100 tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~----- 140 (271)
T PRK13632 100 TVEDDIAFGLENKKVP----------------------------------PKKMKDIIDDLAKKVGMEDYLDKEP----- 140 (271)
T ss_pred cHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHcCCHHHhhCCc-----
Confidence 9999998864321110 0011224577889999987666554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
+.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.. .++++|+.++|+..++. .+|++++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~-~~d~v~~l~~G 218 (271)
T PRK13632 141 QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRK-TRKKTLISITHDMDEAI-LADKVIVFSEG 218 (271)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEEechhHHh-hCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998764 33345555666666764 79999999999
Q ss_pred eEEEecChhHHH
Q 000523 402 QIVYQGPRELVL 413 (1445)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1445)
++++.|+.+++.
T Consensus 219 ~i~~~g~~~~~~ 230 (271)
T PRK13632 219 KLIAQGKPKEIL 230 (271)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 274
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-35 Score=321.22 Aligned_cols=222 Identities=26% Similarity=0.356 Sum_probs=191.3
Q ss_pred cceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCCC
Q 000523 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDN 236 (1445)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1445)
...-++|+|++|+.||+..|||=||||||||+++|.++.+|+ +|+|.++|.++..... ++.++.|+|+..
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa 116 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA 116 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc
Confidence 345689999999999999999999999999999999999999 9999999999866543 367999999999
Q ss_pred CCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccc
Q 000523 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMV 316 (1445)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1445)
++|+.||.||..|+.+.+|++.. +.+.++.+.|+..||+...+.++
T Consensus 117 LlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~yp 162 (386)
T COG4175 117 LLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADKYP 162 (386)
T ss_pred cccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcCc
Confidence 99999999999999999886421 12345677899999998888654
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000523 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1445)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1445)
++||||+||||.|||||..+|+||+||||+|+|||--+.++.+-|.++-... +.+|+.++|+.+|++++.|||.
T Consensus 163 -----~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l-~KTIvFitHDLdEAlriG~rIa 236 (386)
T COG4175 163 -----NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKL-KKTIVFITHDLDEALRIGDRIA 236 (386)
T ss_pred -----ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHh-CCeEEEEecCHHHHHhccceEE
Confidence 4699999999999999999999999999999999999999998887775544 4556669999999999999999
Q ss_pred EecCCeEEEecChhHHHHHHHhcCCCCCCCCChhHHHHhh
Q 000523 397 LLSDGQIVYQGPRELVLEFFASMGFRCPKRKGVADFLQEV 436 (1445)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~f~~lG~~cp~~~~~adfl~ev 436 (1445)
+|.+|+|+..|+++|++. .|...-+++|..++
T Consensus 237 imkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 237 IMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 999999999999999974 35554456666544
No 275
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=334.33 Aligned_cols=214 Identities=26% Similarity=0.303 Sum_probs=180.1
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 6 l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~--p~~G~i~~~g~~i~ 72 (279)
T PRK13635 6 IRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLL--PEAGTITVGGMVLS 72 (279)
T ss_pred EEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECC
Confidence 678888877631 12359999999999999999999999999999999999876 45899999998764
Q ss_pred c---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000523 927 Q---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 927 ~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1445)
. ...++.+||++|++. .++..||.||+.+..... ....++.++.++++++.++|.+..+..+ ..||||
T Consensus 73 ~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G 144 (279)
T PRK13635 73 EETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSGG 144 (279)
T ss_pred cCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHH
Confidence 3 234567999999973 566789999998865432 1233444566899999999988777763 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|++.. + ..+|++++|++ |++++.
T Consensus 145 ~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~-~-~~~d~i~~l~~-G~i~~~ 221 (279)
T PRK13635 145 QKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDE-A-AQADRVIVMNK-GEILEE 221 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH-H-HcCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999999875 8999999999863 4 46999999985 799999
Q ss_pred cCC
Q 000523 1082 GPL 1084 (1445)
Q Consensus 1082 G~~ 1084 (1445)
|+.
T Consensus 222 g~~ 224 (279)
T PRK13635 222 GTP 224 (279)
T ss_pred CCH
Confidence 985
No 276
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=334.03 Aligned_cols=206 Identities=26% Similarity=0.365 Sum_probs=169.6
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC----ccceEEEEcCCCC-CCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----PQRTAAYISQHDN-HIG 239 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 239 (1445)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 35999999999999999999999999999999999999998 999999999875422 2467999999863 344
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
..||.||+.|+....+... .+....++++++.+||++..++.+
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 142 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHAP--- 142 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc---
Confidence 5799999998754322100 011234677899999987777655
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.. +|++++|+
T Consensus 143 --~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tillvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 143 --HLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKK-YGITIILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecChHHHhc-CCEEEEEE
Confidence 469999999999999999999999999999999999999999999987643 34455556777777765 99999999
Q ss_pred CCeEEEecChhHHHH
Q 000523 400 DGQIVYQGPRELVLE 414 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1445)
+|+++++|+++++..
T Consensus 219 ~G~i~~~g~~~~~~~ 233 (280)
T PRK13633 219 SGKVVMEGTPKEIFK 233 (280)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999988753
No 277
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.1e-34 Score=323.09 Aligned_cols=194 Identities=27% Similarity=0.402 Sum_probs=162.6
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++
T Consensus 15 ~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 15 AALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 4999999999999999999999999999999999999998 999999999876532 2357999999998999
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
.+||+||+.+.....+.. . ++....++++++.+||++..++.+
T Consensus 92 ~~t~~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 134 (214)
T cd03292 92 DRNVYENVAFALEVTGVP--P--------------------------------REIRKRVPAALELVGLSHKHRALP--- 134 (214)
T ss_pred CCcHHHHHHHHHHHcCCC--H--------------------------------HHHHHHHHHHHHHcCCHHHhhCCh---
Confidence 999999998875432210 0 001123567788899987666544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +++++.++|+..++.+++|++++|+
T Consensus 135 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tiiivtH~~~~~~~~~d~i~~l~ 210 (214)
T cd03292 135 --AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-A-GTTVVVATHAKELVDTTRHRVIALE 210 (214)
T ss_pred --hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999998754 3 4556667888888999999999999
Q ss_pred CCeE
Q 000523 400 DGQI 403 (1445)
Q Consensus 400 ~G~i 403 (1445)
+|++
T Consensus 211 ~G~~ 214 (214)
T cd03292 211 RGKL 214 (214)
T ss_pred CCcC
Confidence 9974
No 278
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-34 Score=317.52 Aligned_cols=196 Identities=30% Similarity=0.581 Sum_probs=163.9
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC-eEEEEEEEcCcc
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 924 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 924 (1445)
.++|+|++|.++.+ .+++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57899999998643 13457999999999999999999999999999999999986532 568999999987
Q ss_pred CCc--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000523 925 KKQ--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 925 ~~~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1445)
... ...++.++|++|++.+++.+||+|++.+....+ .+.. +..||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 234567999999999999999999998753211 1222 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ +.|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 678777776654468889999999986 788876
Q ss_pred c
Q 000523 1082 G 1082 (1445)
Q Consensus 1082 G 1082 (1445)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 5
No 279
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=332.20 Aligned_cols=218 Identities=21% Similarity=0.274 Sum_probs=181.2
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++|++++++ ++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEh
Confidence 578889988773 2469999999999999999999999999999999999876 4589999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 926 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 926 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
.. ...++.++|++|++..++..|++|++.+......+ .....+..++.++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCCh
Confidence 43 22345799999999888889999999875211100 0001123345678999999998776665 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++++|++ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 899999999986 58899999999985 79999
Q ss_pred EcCCC
Q 000523 1081 VGPLG 1085 (1445)
Q Consensus 1081 ~G~~~ 1085 (1445)
.|+..
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 99863
No 280
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.6e-34 Score=329.77 Aligned_cols=205 Identities=22% Similarity=0.318 Sum_probs=170.7
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC----------------ccceEE
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV----------------PQRTAA 229 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~----------------~~~~~~ 229 (1445)
++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 90 (252)
T TIGR03005 14 TVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIG 90 (252)
T ss_pred eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCeE
Confidence 4999999999999999999999999999999999999998 999999998875321 145799
Q ss_pred EEcCCCCCCCCCCHHHHHHHhHHh-cCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCC
Q 000523 230 YISQHDNHIGEMTVRETLAFSARC-QGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL 308 (1445)
Q Consensus 230 yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL 308 (1445)
|++|++.+++.+||.||+.++... .+.. ..+....++++++.+|+
T Consensus 91 ~v~q~~~~~~~~tv~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl 136 (252)
T TIGR03005 91 MVFQSFNLFPHKTVLDNVTEAPVLVLGMA----------------------------------RAEAEKRAMELLDMVGL 136 (252)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCC
Confidence 999998889999999999875321 1100 00011235677889999
Q ss_pred cccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhH
Q 000523 309 DVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPET 388 (1445)
Q Consensus 309 ~~~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~ 388 (1445)
++..+.. ++.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. ..+++++.++|+..++
T Consensus 137 ~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~~tiiivsH~~~~~ 210 (252)
T TIGR03005 137 ADKADHM-----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLAS-EHDLTMLLVTHEMGFA 210 (252)
T ss_pred hhHhhcC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEeCCHHHH
Confidence 8766543 456999999999999999999999999999999999999999999998765 3355666678888899
Q ss_pred HhhcCeEEEecCCeEEEecChhHHH
Q 000523 389 YDLFDDIILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 389 ~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1445)
.+++|++++|++|++++.|+.+++.
T Consensus 211 ~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 211 REFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999988763
No 281
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-34 Score=329.43 Aligned_cols=219 Identities=21% Similarity=0.259 Sum_probs=179.0
Q ss_pred CCCceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCC--C-CeEEEEE
Q 000523 842 FEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNI 918 (1445)
Q Consensus 842 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i 918 (1445)
..+..+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|
T Consensus 9 ~~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i 75 (260)
T PRK10744 9 TAPSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEI 75 (260)
T ss_pred CCCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEE
Confidence 3445688999988763 2359999999999999999999999999999999999754 1 1358999
Q ss_pred EEcCccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccc
Q 000523 919 TISGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQS 989 (1445)
Q Consensus 919 ~i~g~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~ 989 (1445)
.++|.+... ..+++.++|++|+..+++ .|++||+.+...... ..+.+..++.++++++.+++.+ ..+.
T Consensus 76 ~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 152 (260)
T PRK10744 76 LLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQ 152 (260)
T ss_pred EECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhc
Confidence 999987632 234567999999988777 899999987653321 1233344456889999999843 2233
Q ss_pred cccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceE
Q 000523 990 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDEL 1069 (1445)
Q Consensus 990 ~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v 1069 (1445)
. ...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||+++|++. ++.+.+|++
T Consensus 153 ~-----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i 225 (260)
T PRK10744 153 S-----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYT 225 (260)
T ss_pred C-----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEE
Confidence 2 46799999999999999999999999999999999999999999999985 4789999999986 577889999
Q ss_pred eEEecCcEEEEEcCC
Q 000523 1070 FLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1070 ~~l~~gG~~~y~G~~ 1084 (1445)
++|++ |+++..|+.
T Consensus 226 ~~l~~-G~i~~~g~~ 239 (260)
T PRK10744 226 AFMYL-GELIEFGNT 239 (260)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99985 799999875
No 282
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=345.62 Aligned_cols=201 Identities=24% Similarity=0.300 Sum_probs=174.3
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcc---c----ccceEEEeccCCCCC
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE---T----FARISGYCEQNDIHS 944 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~Q~d~~~ 944 (1445)
..+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++... . .++.+||++|+..++
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~ 118 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALM 118 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCC
Confidence 468999999999999999999999999999999999876 4589999999876431 1 135699999999999
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000523 945 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1024 (1445)
Q Consensus 945 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDE 1024 (1445)
+.+||+||+.+....+. ...++.++.++++++.++|.+..+.. ++.||||||||++|||+|+.+|++|+|||
T Consensus 119 ~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~-----~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 119 PHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSY-----PDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999999998765432 23344456688999999998877766 45799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1025 PTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1025 PTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 9999999999999999999875 4899999999986 57888999999985 799999875
No 283
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-34 Score=296.37 Aligned_cols=204 Identities=26% Similarity=0.407 Sum_probs=175.9
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHH
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
..+|+|+|+.|.+||.++++||||||||||||+++|..+|+ .|+|.+||.+++. |...-|.|+|++.++|.+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~g--PgaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEG--PGAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccC--CCccceeEeccCccchhhHHH
Confidence 34899999999999999999999999999999999999998 9999999998764 334568999999999999999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.|+.++.|.+.. .| ..++.+.+...||++..+..+ -.|
T Consensus 93 dNvafgL~l~Gi~k~-------~R---------------------------~~~a~q~l~~VgL~~~~~~~i-----~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA-------QR---------------------------REIAHQMLALVGLEGAEHKYI-----WQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH-------HH---------------------------HHHHHHHHHHhCcccccccce-----Eee
Confidence 999999999886421 11 234567888999997766544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec--CCe
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~--~G~ 402 (1445)
||||||||.|||||..+|+.|+||||+.+||.-++.++.+.|-++.+..+ .-++.++|+..|+.-+++++++|+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tg-k~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETG-KQVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhC-CeEEEEeccHHHHHhhhheeEEecCCCce
Confidence 99999999999999999999999999999999999999999988887554 455558999999999999999998 489
Q ss_pred EEEecChhHHH
Q 000523 403 IVYQGPRELVL 413 (1445)
Q Consensus 403 iv~~G~~~~~~ 413 (1445)
|+..=+.+-..
T Consensus 213 vv~~~~~df~r 223 (259)
T COG4525 213 VVERLPLDFAR 223 (259)
T ss_pred eeEecCCCHHH
Confidence 99877766433
No 284
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=333.11 Aligned_cols=213 Identities=25% Similarity=0.372 Sum_probs=176.7
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcc
Confidence 45677777653 2359999999999999999999999999999999999876 45899999998763
Q ss_pred c-----ccccceEEEeccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000523 927 Q-----ETFARISGYCEQNDIH-SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1000 (1445)
Q Consensus 927 ~-----~~~~~~~gyv~Q~d~~-~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1445)
. ...++.++|++|++.. ....|+.|++.+....+ ....++.++.++++++.+++.+..+.. +..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCC
Confidence 1 1235679999998753 34568999998764332 123334445678899999998777665 45799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999777899999999986 47788999999985 79999
Q ss_pred EcCC
Q 000523 1081 VGPL 1084 (1445)
Q Consensus 1081 ~G~~ 1084 (1445)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 9875
No 285
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-34 Score=315.34 Aligned_cols=190 Identities=59% Similarity=0.947 Sum_probs=162.1
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|+++.++.+. .++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 3 ~l~~~~l~~~~~~~~---------~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVKG---------GKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCCC---------CceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 467888888774210 12469999999999999999999999999999999999743234689999999876
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000523 926 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1005 (1445)
Q Consensus 926 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1445)
. ..+++.++|++|++.+++.+|++|++.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 4 345567999999998899999999998743110 49999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1006 Rl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
|++||++|+.+|++|+|||||+|||+.++..+++.|+++++.|+|||+++|+++.++.+.+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999887789999999998744678899999998658999876
No 286
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-34 Score=327.72 Aligned_cols=220 Identities=23% Similarity=0.307 Sum_probs=176.8
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCC---CCeEEEEEEEc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT---GGYITGNITIS 921 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~---~~~~~G~i~i~ 921 (1445)
..+.++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|... +.+.+|+|.++
T Consensus 5 ~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 71 (253)
T PRK14242 5 PKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLD 71 (253)
T ss_pred cEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEEC
Confidence 3588999988763 2359999999999999999999999999999999999742 11358999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000523 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 996 (1445)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1445)
|.++.. ...++.++|++|++.+++ .||+||+.+....+.. ...+..++.++++++.+++.+........ .+
T Consensus 72 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~ 147 (253)
T PRK14242 72 GENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGV--KDKAYLAERVERSLRHAALWDEVKDRLHE-SA 147 (253)
T ss_pred CEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCchhhhHHhhC-Cc
Confidence 987642 134567999999988887 5999999887543311 12233345678889999985422111111 14
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|++ |
T Consensus 148 ~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~-G 224 (253)
T PRK14242 148 LGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM-G 224 (253)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-C
Confidence 6799999999999999999999999999999999999999999999985 4799999999986 57788999999986 7
Q ss_pred EEEEEcCC
Q 000523 1077 QEIYVGPL 1084 (1445)
Q Consensus 1077 ~~~y~G~~ 1084 (1445)
+++..|+.
T Consensus 225 ~i~~~g~~ 232 (253)
T PRK14242 225 KLIEVGPT 232 (253)
T ss_pred EEEEeCCH
Confidence 89988875
No 287
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=327.10 Aligned_cols=202 Identities=25% Similarity=0.381 Sum_probs=165.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1445)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 95 (237)
T PRK11614 19 QALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSRM 95 (237)
T ss_pred eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 35699999998888889
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHc-CCcccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLDVCADTMVGDEM 320 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~~ 320 (1445)
||+||+.++..... . + + ....++.+++.+ ++.+..++.
T Consensus 96 tv~~~l~~~~~~~~---~-~---~-----------------------------~~~~~~~~l~~~~~l~~~~~~~----- 134 (237)
T PRK11614 96 TVEENLAMGGFFAE---R-D---Q-----------------------------FQERIKWVYELFPRLHERRIQR----- 134 (237)
T ss_pred cHHHHHHHhhhccC---h-h---H-----------------------------HHHHHHHHHHHHHHHHHHHhCc-----
Confidence 99999987542110 0 0 0 001123345555 354444433
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000523 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1445)
Q Consensus 321 ~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1445)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ .+|+.++|+..++.+.+|++++|++
T Consensus 135 ~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~ 212 (237)
T PRK11614 135 AGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QG-MTIFLVEQNANQALKLADRGYVLEN 212 (237)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCcHHHHHhhCCEEEEEeC
Confidence 446999999999999999999999999999999999999999999998754 34 4555578888899999999999999
Q ss_pred CeEEEecChhHHH
Q 000523 401 GQIVYQGPRELVL 413 (1445)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1445)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (237)
T PRK11614 213 GHVVLEDTGDALL 225 (237)
T ss_pred CEEEeeCCHHHHh
Confidence 9999999988774
No 288
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.4e-34 Score=322.03 Aligned_cols=193 Identities=30% Similarity=0.425 Sum_probs=161.5
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1445)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++
T Consensus 16 ~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (214)
T TIGR02673 16 AALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLP 92 (214)
T ss_pred eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhcc
Confidence 4999999999999999999999999999999999999998 999999999876542 2357999999988888
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
.+||+||+.++....+... .+....++++++.+||++..++.+
T Consensus 93 ~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 135 (214)
T TIGR02673 93 DRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADAFP--- 135 (214)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh---
Confidence 9999999998754321100 001123567888999986655544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.++||++++|+
T Consensus 136 --~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~tH~~~~~~~~~d~i~~l~ 211 (214)
T TIGR02673 136 --EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-R-GTTVIVATHDLSLVDRVAHRVIILD 211 (214)
T ss_pred --hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEEEEec
Confidence 46999999999999999999999999999999999999999999998753 3 4456667888889999999999999
Q ss_pred CCe
Q 000523 400 DGQ 402 (1445)
Q Consensus 400 ~G~ 402 (1445)
+|+
T Consensus 212 ~G~ 214 (214)
T TIGR02673 212 DGR 214 (214)
T ss_pred CCC
Confidence 985
No 289
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=338.05 Aligned_cols=214 Identities=21% Similarity=0.247 Sum_probs=173.0
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCC-ceeEEEEcCccCCCcCc-------cceEEEEcCCC-
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLK-VSGTVTYNGHDMDEFVP-------QRTAAYISQHD- 235 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~-~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d- 235 (1445)
.++|+|||++|++||+++|+|+||||||||+++|+|++++... .+|+|.++|.++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 4599999999999999999999999999999999999975211 28999999998865432 13699999987
Q ss_pred -CCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 236 -NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 236 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
.+.+.+||.+++....+... +. ...+....++++|+.+||++..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~-~~--------------------------------~~~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQ-GG--------------------------------NKKTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhc-CC--------------------------------CHHHHHHHHHHHHHHCCCCChHH-
Confidence 47889999999876543210 00 00112234677899999974221
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
+-++.+..|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++... .+.+++.++|+...+.+++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~-~g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQK-ENMALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCE
Confidence 112455679999999999999999999999999999999999999999999998653 355677789999999999999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|++++.|+.+++.+
T Consensus 224 i~vm~~G~ive~g~~~~~~~ 243 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIFR 243 (326)
T ss_pred EEEEECCEEEEECCHHHHhh
Confidence 99999999999999988753
No 290
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.9e-34 Score=326.58 Aligned_cols=206 Identities=24% Similarity=0.390 Sum_probs=168.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|+++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 3899999999999999999999999999999999999863 12389999999987542 1246799999998888
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc----ccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1445)
+ +||+||+.+..+..+.... .+....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKDK---------------------------------KELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 7 9999999886543210000 00112356778899997 44443
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++.+++|+
T Consensus 141 -----~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 -----SALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred -----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 3456999999999999999999999999999999999999999999998753 3 4566678888899999999
Q ss_pred EEEecCCeEEEecChhHHH
Q 000523 395 IILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1445)
+++|++|+++++|+.+++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 291
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.7e-34 Score=329.90 Aligned_cols=223 Identities=23% Similarity=0.294 Sum_probs=178.6
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+......+ ..+++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 56788887764210000 0013579999999999999999999999999999999999876 46899999998764
Q ss_pred cc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000523 927 QE------TFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 997 (1445)
Q Consensus 927 ~~------~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1445)
.. ..++.++|++|++ .+.+.+||+|++.+...... .......++.++++++.+++. +..+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 31 1345799999996 46678999999977543211 122333445688999999995 555554 45
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999986 57778999999985 7
Q ss_pred EEEEEcCC
Q 000523 1077 QEIYVGPL 1084 (1445)
Q Consensus 1077 ~~~y~G~~ 1084 (1445)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 99999885
No 292
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=331.57 Aligned_cols=217 Identities=27% Similarity=0.373 Sum_probs=179.6
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 478888887663 2469999999999999999999999999999999999865 4589999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 926 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 926 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
.. ..+++.++|++|+..+++.+|+.|++.+....... ........++.++++++.+++.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 32 23456799999998888889999999875321110 00111223456789999999987666653 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
|||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999764 899999999986 57788999999985 78999
Q ss_pred EcCC
Q 000523 1081 VGPL 1084 (1445)
Q Consensus 1081 ~G~~ 1084 (1445)
.|+.
T Consensus 229 ~~~~ 232 (265)
T PRK10575 229 QGTP 232 (265)
T ss_pred ecCH
Confidence 9885
No 293
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2e-34 Score=325.38 Aligned_cols=233 Identities=25% Similarity=0.324 Sum_probs=181.2
Q ss_pred EEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhhcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHH
Q 000523 119 VRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLAL 198 (1445)
Q Consensus 119 v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L 198 (1445)
|+.+|++.++....+ -+++.|...+.+ ..+...+++|+|+|+++++|++++|+|||||||||||++|
T Consensus 1 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~----------~~~~~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i 67 (236)
T cd03267 1 IEVSNLSKSYRVYSK---EPGLIGSLKSLF----------KRKYREVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKIL 67 (236)
T ss_pred CceecchhhccCcCC---ccccchhHHHHH----------hcccCCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 356788888865322 233334333322 1233446799999999999999999999999999999999
Q ss_pred hCCCCCCCCceeEEEEcCccCCCc--CccceEEEEc-CCCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCC
Q 000523 199 AGKLDPTLKVSGTVTYNGHDMDEF--VPQRTAAYIS-QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGI 275 (1445)
Q Consensus 199 ~G~~~~~~~~~G~V~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (1445)
+|.++|+ +|+|.++|+++... ..++.++|++ |++.+++.+||+||+.+.....+...
T Consensus 68 ~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~tv~e~l~~~~~~~~~~~----------------- 127 (236)
T cd03267 68 SGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDLPVIDSFYLLAAIYDLPP----------------- 127 (236)
T ss_pred hCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCCCCcHHHHHHHHHHHcCCCH-----------------
Confidence 9999998 99999999875432 1245799997 55667789999999988654322100
Q ss_pred CCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCC
Q 000523 276 KPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLD 355 (1445)
Q Consensus 276 ~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD 355 (1445)
++....++++++.+||++..|+.++ .||||||||++||++|+.+|++++|||||+|||
T Consensus 128 -----------------~~~~~~~~~~l~~~gl~~~~~~~~~-----~LS~G~~qrl~la~al~~~p~llllDEPt~~LD 185 (236)
T cd03267 128 -----------------ARFKKRLDELSELLDLEELLDTPVR-----QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLD 185 (236)
T ss_pred -----------------HHHHHHHHHHHHHcCChhHhcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 0011235667888999888877654 599999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEec
Q 000523 356 SSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1445)
Q Consensus 356 ~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1445)
+.++..+.+.|+++.+ .++.+|+.++|+..++.+++|++++|++|++++.|
T Consensus 186 ~~~~~~l~~~l~~~~~-~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 186 VVAQENIRNFLKEYNR-ERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHHHh-cCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999999998765 33445666788888899999999999999998765
No 294
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=332.23 Aligned_cols=205 Identities=25% Similarity=0.362 Sum_probs=170.9
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCC-CCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1445)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 3899999999999999999999999999999999999998 9999999998754322 356899999863 35568
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+||+.++....+.. ..+....++++++.+||.+..++.+
T Consensus 95 tv~~~l~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~----- 135 (277)
T PRK13652 95 TVEQDIAFGPINLGLD----------------------------------EETVAHRVSSALHMLGLEELRDRVP----- 135 (277)
T ss_pred cHHHHHHhHHHHcCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 9999998765322110 0011224567889999987766654
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.. ..+++|+.++|+.+++.+.||++++|++|
T Consensus 136 ~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~-~~g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 136 HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPE-TYGMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998765 33456666788888999999999999999
Q ss_pred eEEEecChhHHH
Q 000523 402 QIVYQGPRELVL 413 (1445)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1445)
++++.|+++++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998875
No 295
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-34 Score=328.73 Aligned_cols=205 Identities=33% Similarity=0.507 Sum_probs=170.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|
T Consensus 16 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 92 (258)
T PRK13548 16 TLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFT 92 (258)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCC
Confidence 4999999999999999999999999999999999999998 9999999988754332 356999999988878899
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
|+||+.++....+. .. ++....++++++.+||++..++.+ .
T Consensus 93 v~e~l~~~~~~~~~--~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 133 (258)
T PRK13548 93 VEEVVAMGRAPHGL--SR--------------------------------AEDDALVAAALAQVDLAHLAGRDY-----P 133 (258)
T ss_pred HHHHHHhhhcccCC--Cc--------------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----c
Confidence 99999885421110 00 001123567788999987666554 4
Q ss_pred cCChhhhhHHHHHHHHh------cCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000523 323 GISGGQKKRVTTGEMMV------GPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~------~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1445)
.|||||||||+||++|+ .+|++++|||||+|||+.++..+.+.|+++.+.. +.+|+.++|+..++.+++|+|+
T Consensus 134 ~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~ 212 (258)
T PRK13548 134 QLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHER-GLAVIVVLHDLNLAARYADRIV 212 (258)
T ss_pred cCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhcCEEE
Confidence 69999999999999999 5999999999999999999999999999876333 4456667888889999999999
Q ss_pred EecCCeEEEecChhHHH
Q 000523 397 LLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1445)
+|++|++++.|+.+++.
T Consensus 213 ~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 213 LLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEECCEEEeeCCHHHHh
Confidence 99999999999987764
No 296
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=330.28 Aligned_cols=220 Identities=26% Similarity=0.343 Sum_probs=180.2
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC-eEEEEEEEcCcc
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 924 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 924 (1445)
-+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 367888887663 246999999999999999999999999999999999987542 236999999987
Q ss_pred CCc--------ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHcCCcccccccc
Q 000523 925 KKQ--------ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-----PEVDSETRKMFIDEVMELVELNPLRQSLV 991 (1445)
Q Consensus 925 ~~~--------~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~v 991 (1445)
... ...++.++|++|++.+++.+||.|++.+......+ .....++.++.++++++.+++.+..+..
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~- 149 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQR- 149 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCC-
Confidence 532 12345689999999989999999999875321000 0111233345688999999998777765
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEe
Q 000523 992 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELF 1070 (1445)
Q Consensus 992 g~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~ 1070 (1445)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++++ .|.|||+++|++. .+.+.+|+++
T Consensus 150 ----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 150 ----VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred ----ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 357999999999999999999999999999999999999999999999975 4899999999986 4788899999
Q ss_pred EEecCcEEEEEcCCC
Q 000523 1071 LMKRGGQEIYVGPLG 1085 (1445)
Q Consensus 1071 ~l~~gG~~~y~G~~~ 1085 (1445)
+|++ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9985 7899998863
No 297
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=332.33 Aligned_cols=203 Identities=27% Similarity=0.396 Sum_probs=168.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCC-CCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDN-HIGE 240 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~-~~~~ 240 (1445)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 16 PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 3899999999999999999999999999999999999998 9999999998764322 357999999864 4677
Q ss_pred CCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccc
Q 000523 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1445)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1445)
.||+||+.|+.+..+.. ..+....++++++.+||++..++.+
T Consensus 93 ~tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~~---- 134 (274)
T PRK13644 93 RTVEEDLAFGPENLCLP----------------------------------PIEIRKRVDRALAEIGLEKYRHRSP---- 134 (274)
T ss_pred chHHHHHHhhHHHcCCC----------------------------------HHHHHHHHHHHHHHCCCHHHhcCCc----
Confidence 89999998865332110 0011224567788999987766554
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000523 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1445)
Q Consensus 321 ~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1445)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++ ..+|+|++|++
T Consensus 135 -~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~~tH~~~~~-~~~d~v~~l~~ 210 (274)
T PRK13644 135 -KTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-K-GKTIVYITHNLEEL-HDADRIIVMDR 210 (274)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHH-hhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998753 3 45555577887777 56999999999
Q ss_pred CeEEEecChhHHH
Q 000523 401 GQIVYQGPRELVL 413 (1445)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1445)
|++++.|+.+++.
T Consensus 211 G~i~~~g~~~~~~ 223 (274)
T PRK13644 211 GKIVLEGEPENVL 223 (274)
T ss_pred CEEEEECCHHHHh
Confidence 9999999988764
No 298
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-35 Score=334.60 Aligned_cols=255 Identities=24% Similarity=0.326 Sum_probs=199.7
Q ss_pred hhHHHHHHhhhccccchHHHHHHHHHHHhhcCCC-CCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhhc
Q 000523 80 ERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGID-LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRII 158 (1445)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~ 158 (1445)
+...-+|+.++..+...+ +.++.+...+. .....|.|+|+++.+++
T Consensus 228 q~ltdme~mfdLl~~~~~-----v~d~pda~~L~~~~~g~v~F~~V~F~y~~---------------------------- 274 (497)
T COG5265 228 QALTDMEKMFDLLDVEAE-----VSDAPDAPPLWPVRLGAVAFINVSFAYDP---------------------------- 274 (497)
T ss_pred HhhhhHHHHHHhhccchh-----hccCCCCccccccccceEEEEEEEeeccc----------------------------
Confidence 334445555555555544 44555544443 34567999999999854
Q ss_pred CCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCC
Q 000523 159 PSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHD 235 (1445)
Q Consensus 159 ~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d 235 (1445)
.+++|+++|+++++|++++++||+|+||||++++|-++++++ +|.|+++|+++.+... ++.+|.|||+.
T Consensus 275 -----~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~---sG~I~id~qdir~vtq~slR~aIg~VPQDt 346 (497)
T COG5265 275 -----RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVN---SGSITIDGQDIRDVTQQSLRRAIGIVPQDT 346 (497)
T ss_pred -----cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCc---CceEEEcchhHHHhHHHHHHHHhCcCcccc
Confidence 234999999999999999999999999999999999999999 9999999999876543 57899999965
Q ss_pred CCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccc
Q 000523 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1445)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1445)
. +++.|+..|+.++. +....+....+++..+.. . -+..|++++||.
T Consensus 347 v-LFNDti~yni~ygr----~~at~eev~aaa~~aqi~---------------------------~--fi~~lP~gy~t~ 392 (497)
T COG5265 347 V-LFNDTIAYNIKYGR----PDATAEEVGAAAEAAQIH---------------------------D--FIQSLPEGYDTG 392 (497)
T ss_pred e-ehhhhHHHHHhccC----ccccHHHHHHHHHHhhhh---------------------------H--HHHhCchhhhcc
Confidence 5 45569999999874 222233322222221111 1 134589999999
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
||+++.+ |||||||||+|||+++.+|+||++||.||+||+.|++.|...|++.+ .++|+++.. |+..+.--+|.|
T Consensus 393 Vgerglk-lSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~--~~rttlvia--hrlsti~~adei 467 (497)
T COG5265 393 VGERGLK-LSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVS--AGRTTLVIA--HRLSTIIDADEI 467 (497)
T ss_pred cchheee-ccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHh--CCCeEEEEe--ehhhhccCCceE
Confidence 9999997 99999999999999999999999999999999999999999999876 345555533 456677789999
Q ss_pred EEecCCeEEEecChhHHHH
Q 000523 396 ILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1445)
++|++|+|++.|++++++.
T Consensus 468 ivl~~g~i~erg~h~~ll~ 486 (497)
T COG5265 468 IVLDNGRIVERGTHEELLA 486 (497)
T ss_pred EEeeCCEEEecCcHHHHHH
Confidence 9999999999999999986
No 299
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=332.90 Aligned_cols=217 Identities=24% Similarity=0.327 Sum_probs=176.3
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.++... ...+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 66788887764210 001359999999999999999999999999999999999875 45899999998754
Q ss_pred c-------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000523 927 Q-------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 996 (1445)
Q Consensus 927 ~-------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 996 (1445)
. ..+++.++|++|++ .+++ .||+||+.+..... ....++.++.++++++.++|.+ ..+.. +
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN-----P 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 22456799999986 3444 69999998764332 1233344556788999999963 44544 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G 221 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-G 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999777899999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 000523 1077 QEIYVGPL 1084 (1445)
Q Consensus 1077 ~~~y~G~~ 1084 (1445)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (280)
T PRK13649 222 KLVLSGKP 229 (280)
T ss_pred EEEEeCCH
Confidence 99988875
No 300
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-34 Score=321.67 Aligned_cols=215 Identities=26% Similarity=0.337 Sum_probs=180.0
Q ss_pred cceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC-C-CCCceeEEEEcCccCCCcCc-------cceEEEEcCC
Q 000523 164 HLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-P-TLKVSGTVTYNGHDMDEFVP-------QRTAAYISQH 234 (1445)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-~-~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~ 234 (1445)
...+++||||++++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++-.+.. .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4569999999999999999999999999999999999998 4 33467999999998755543 2579999998
Q ss_pred C--CCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccc
Q 000523 235 D--NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1445)
Q Consensus 235 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1445)
+ .+.|.+||.+.+.-..+.+.... ..++...++.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 6 58899999988865543321000 0112344577889999998642
Q ss_pred cccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhc
Q 000523 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLF 392 (1445)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~ 392 (1445)
.+-+.++.+|||||||||.||.||+.+|++|+.||||++||...+.+|++.|+++.+ ..++.++.|+|+..-+.++|
T Consensus 145 --~~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 --RRLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIA 221 (316)
T ss_pred --HHHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhc
Confidence 234567788999999999999999999999999999999999999999999999876 56788888999999999999
Q ss_pred CeEEEecCCeEEEecChhHHH
Q 000523 393 DDIILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 393 D~iilL~~G~iv~~G~~~~~~ 413 (1445)
|||+||..|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999999874
No 301
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.6e-34 Score=324.89 Aligned_cols=198 Identities=23% Similarity=0.381 Sum_probs=167.1
Q ss_pred eecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHH
Q 000523 875 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLL 954 (1445)
Q Consensus 875 L~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~ 954 (1445)
|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|++.+++.+||.|++.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999876 45899999998764322 12489999999999999999998
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000523 955 FSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1034 (1445)
Q Consensus 955 f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~ 1034 (1445)
+...... ......+.++.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVL-PDLSKSERRAIVEEHIALVGLTEAADKR-----PGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhcc-cCCCHHHHHHHHHHHHHHcCCHHHHcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 7632111 1223334455678899999998776665 357999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1035 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1035 ~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998764 899999999986 57888999999986 788888764
No 302
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=4.4e-34 Score=321.29 Aligned_cols=213 Identities=25% Similarity=0.349 Sum_probs=175.3
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++|+++.++... ....+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~~---------~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQGE---------HELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCCC---------cceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 478889887764210 11359999999999999999999999999999999999875 4589999999876
Q ss_pred Cccc------c-cceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000523 926 KQET------F-ARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 998 (1445)
Q Consensus 926 ~~~~------~-~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1445)
.... . ++.++|++|++.+++.+|+.||+.+....+. ......++.++++++.+++.+..+.. +..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHL-----PAQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCC-----hhh
Confidence 4311 1 2469999999988899999999988654331 22334456688999999998776665 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 999 LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999998754 899999999986 34 56999999985 67
Q ss_pred EEE
Q 000523 1078 EIY 1080 (1445)
Q Consensus 1078 ~~y 1080 (1445)
++.
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 754
No 303
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.1e-34 Score=324.27 Aligned_cols=210 Identities=25% Similarity=0.313 Sum_probs=173.0
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
+++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (230)
T TIGR03410 2 EVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITK 66 (230)
T ss_pred EEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCC
Confidence 4667776653 2469999999999999999999999999999999999876 458999999987543
Q ss_pred c----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCcCCHH
Q 000523 928 E----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVE-LNPLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 928 ~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~LSgG 1002 (1445)
. ..++.++|++|++.+++.+|+.|++.+....+. .. ..+..+++++.++ +.+..+.. ++.||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G 135 (230)
T TIGR03410 67 LPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGG 135 (230)
T ss_pred CCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHH
Confidence 1 124569999999999999999999988654321 11 1223567777776 45555554 4579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..
T Consensus 136 ~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~ 213 (230)
T TIGR03410 136 QQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVAS 213 (230)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999998764 899999999986 57778999999985 799999
Q ss_pred cCCC
Q 000523 1082 GPLG 1085 (1445)
Q Consensus 1082 G~~~ 1085 (1445)
|+..
T Consensus 214 ~~~~ 217 (230)
T TIGR03410 214 GAGD 217 (230)
T ss_pred CCHH
Confidence 9863
No 304
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-34 Score=322.52 Aligned_cols=212 Identities=27% Similarity=0.395 Sum_probs=179.3
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
.++|+++.+. .+.+|+|+|++++|||+++|+|+||||||||+++|+|..+ +..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~--~~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFET--PTSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 4677777653 2469999999999999999999999999999999999876 458999999987643
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000523 928 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1006 (1445)
Q Consensus 928 ~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1006 (1445)
. ..++.++|++|++..++.+|+.||+.+....+. ......++.++++++.+++.+..+.. +..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRK-----PSQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHHHH
Confidence 2 234678999999998888999999987654331 22333445678899999998877765 35799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1007 l~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999998764 899999999986 57888999999985 789988864
No 305
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.2e-34 Score=329.28 Aligned_cols=216 Identities=28% Similarity=0.405 Sum_probs=177.8
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcc
Confidence 45677776653 2469999999999999999999999999999999999875 45899999998754
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000523 927 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 927 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1445)
. ...++.++|++|++..++..||.||+.+....... ......+..+.++++++.+++.+..+.. +..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRD-----MSTLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHH
Confidence 3 23345689999998777889999999875311100 0011122344678899999998776665 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
||||++||++|+.+|++++|||||+|||+.+...+++.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999777899999999997 57789999999985 7899998
Q ss_pred CC
Q 000523 1083 PL 1084 (1445)
Q Consensus 1083 ~~ 1084 (1445)
+.
T Consensus 220 ~~ 221 (256)
T TIGR03873 220 PP 221 (256)
T ss_pred CH
Confidence 86
No 306
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=330.00 Aligned_cols=204 Identities=24% Similarity=0.333 Sum_probs=167.7
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC---ccceEEEEcCCCC-CCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1445)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 4899999999999999999999999999999999999998 999999999875432 2457999999874 67888
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
|+++|+.|.....+.. . .+....++.+++.+||.+..|+. +
T Consensus 100 ~v~~~~~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~ 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVP--Y--------------------------------DEMHRRVSEALKQVDMLERADYE-----P 140 (269)
T ss_pred cHHHHHHhhHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCCchhhhCC-----c
Confidence 9999998865332110 0 00112356778899998766654 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
+.||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.. ..+++|+.++|+..++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tiiivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKS-EHNITIISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCchHHhc-CCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 324445556777777765 9999999999
Q ss_pred eEEEecChhHHH
Q 000523 402 QIVYQGPRELVL 413 (1445)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1445)
++++.|+++++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 307
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-34 Score=331.16 Aligned_cols=214 Identities=28% Similarity=0.356 Sum_probs=177.9
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+. +++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECc
Confidence 45778877663 12359999999999999999999999999999999999875 45899999998763
Q ss_pred c-----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000523 927 Q-----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1000 (1445)
Q Consensus 927 ~-----~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1445)
. ...++.++|++|++. .+...||.|++.+..... ....++..+.+.++++.++|.+..+.. ++.||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKP-----PHHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCC-----hhhCC
Confidence 1 124567999999963 334579999998764321 123344455688999999998877766 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|.|||+++|++. ++.+.+|++++|++ |+++.
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999777999999999986 57788999999986 79999
Q ss_pred EcCC
Q 000523 1081 VGPL 1084 (1445)
Q Consensus 1081 ~G~~ 1084 (1445)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 9985
No 308
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-34 Score=328.79 Aligned_cols=220 Identities=23% Similarity=0.257 Sum_probs=177.5
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC---CeEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 922 (1445)
.+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 588999988763 24699999999999999999999999999999999997642 13689999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.++.. ..+++.++|++|++..++. ||.||+.+....+.. .....+.++.++++++.+++.+........ .+.
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 162 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLHE-PGT 162 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhhC-Ccc
Confidence 87642 2345679999999887774 999999987543321 112233345678899999996421111111 146
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|++ |+
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 239 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFHL-GN 239 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 789999999986 47788999999985 79
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
++..|+.
T Consensus 240 i~~~g~~ 246 (267)
T PRK14235 240 LVEVGDT 246 (267)
T ss_pred EEEeCCH
Confidence 9999874
No 309
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.2e-34 Score=325.41 Aligned_cols=211 Identities=23% Similarity=0.342 Sum_probs=171.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 16 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (242)
T TIGR03411 16 KALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENL 92 (242)
T ss_pred EEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCC
Confidence 4999999999999999999999999999999999999998 9999999988755432 24699999999899999
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+||+.++..... ..+...... ...+....++++++.+|+++..++.+
T Consensus 93 tv~~nl~~~~~~~~--~~~~~~~~~------------------------~~~~~~~~~~~~l~~~~l~~~~~~~~----- 141 (242)
T TIGR03411 93 TVFENLELALPRDK--SVFASLFFR------------------------LSAEEKDRIEEVLETIGLADEADRLA----- 141 (242)
T ss_pred CHHHHHHHhhhccc--ccccccccc------------------------cHHHHHHHHHHHHHHcCCchhhcCCh-----
Confidence 99999988643110 000000000 00011234677889999987666554
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
+.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++.++||+|++|++|
T Consensus 142 ~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g 218 (242)
T TIGR03411 142 GLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--K-HSVVVVEHDMEFVRSIADKVTVLHQG 218 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--C-CEEEEEECCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998743 3 45666788888999999999999999
Q ss_pred eEEEecChhHHH
Q 000523 402 QIVYQGPRELVL 413 (1445)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1445)
+++++|+.+++.
T Consensus 219 ~~~~~~~~~~~~ 230 (242)
T TIGR03411 219 SVLAEGSLDQVQ 230 (242)
T ss_pred eEEeeCCHHHHh
Confidence 999999987753
No 310
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-34 Score=327.14 Aligned_cols=206 Identities=21% Similarity=0.301 Sum_probs=164.6
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+. ..+|+|.++|+++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 38999999999999999999999999999999999998620 1289999999886421 1245799999987776
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc----ccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1445)
.+||+||+.|+....+.... .+....++..++.+|+. +..++
T Consensus 101 -~~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 -LMSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred -cCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 48999999986533211000 00112345567777763 33344
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.++.|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.+.+|+
T Consensus 147 -----~~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 -----NALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK--ES-YTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred -----CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhCCE
Confidence 345799999999999999999999999999999999999999999999874 33 5566678888899999999
Q ss_pred EEEecCCeEEEecChhHHH
Q 000523 395 IILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1445)
+++|++|+++..|+++++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988774
No 311
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=327.92 Aligned_cols=220 Identities=22% Similarity=0.296 Sum_probs=172.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~l 241 (1445)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.+++.+
T Consensus 19 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 95 (255)
T PRK11300 19 LAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFREM 95 (255)
T ss_pred EEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 23589999999999999
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+||+.++....... +...... + .+..+ ....+....++++++.+||++..+..+
T Consensus 96 tv~enl~~~~~~~~~~---~~~~~~~------~-~~~~~---------~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 151 (255)
T PRK11300 96 TVIENLLVAQHQQLKT---GLFSGLL------K-TPAFR---------RAESEALDRAATWLERVGLLEHANRQA----- 151 (255)
T ss_pred cHHHHHHHhhhccccc---hhhhhhc------c-ccccc---------cchhHHHHHHHHHHHhCChhhhhhCCh-----
Confidence 9999999864311000 0000000 0 00000 000011234667888999986666544
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
+.|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++.+ ..+++|+.++|+..++.+.+|++++|++|
T Consensus 152 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~g 230 (255)
T PRK11300 152 GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRN-EHNVTVLLIEHDMKLVMGISDRIYVVNQG 230 (255)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHh-hcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998754 33456666788889999999999999999
Q ss_pred eEEEecChhHHH
Q 000523 402 QIVYQGPRELVL 413 (1445)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1445)
++++.|+.+++.
T Consensus 231 ~i~~~~~~~~~~ 242 (255)
T PRK11300 231 TPLANGTPEEIR 242 (255)
T ss_pred eEEecCCHHHHh
Confidence 999999988763
No 312
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4e-34 Score=339.83 Aligned_cols=213 Identities=26% Similarity=0.425 Sum_probs=179.7
Q ss_pred CCceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcC
Q 000523 843 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 922 (1445)
Q Consensus 843 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g 922 (1445)
.+..+..+|++|.++. .+++++|+|+++++|+.+||+|+||||||||+++|+|..+ +.+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~--~~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLA--PTQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECC
Confidence 4556777799988752 2379999999999999999999999999999999999887 3689999999
Q ss_pred ccCC---cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc------ccccC
Q 000523 923 YPKK---QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQ------SLVGL 993 (1445)
Q Consensus 923 ~~~~---~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~------~~vg~ 993 (1445)
.+.. ...++++++||+|++.+++ -|++||+.++. ++.++ +.+.++++..+|.+..+ +.+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~-----~~~s~----e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR-----PDASD----EEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC-----CcCCH----HHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 8754 4568899999999998876 69999998752 22222 34678888888877654 34444
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
+.++|||||+|||++||||+++++++++||||++||.++++.|++.|.++++ ++|||++||++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 3578999999999999999999999999999999999999999999999986 599999999985 466789999998
Q ss_pred cCcEEEEEcCC
Q 000523 1074 RGGQEIYVGPL 1084 (1445)
Q Consensus 1074 ~gG~~~y~G~~ 1084 (1445)
+ |+++..|..
T Consensus 529 ~-G~l~~~g~~ 538 (559)
T COG4988 529 N-GRLVEQGTH 538 (559)
T ss_pred C-CceeccCCH
Confidence 5 799998875
No 313
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-34 Score=327.52 Aligned_cols=224 Identities=23% Similarity=0.260 Sum_probs=181.3
Q ss_pred cCCCceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC---CeEEEE
Q 000523 841 PFEPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGN 917 (1445)
Q Consensus 841 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~ 917 (1445)
|..+..+.++|+++.++ .+.+|+|+|+++++||+++|+|+|||||||||++|+|...+ .+.+|+
T Consensus 15 ~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~ 81 (267)
T PRK14237 15 PEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQ 81 (267)
T ss_pred CCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceE
Confidence 33445689999988763 24699999999999999999999999999999999997642 146899
Q ss_pred EEEcCccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc
Q 000523 918 ITISGYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVG 992 (1445)
Q Consensus 918 i~i~g~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg 992 (1445)
|.++|.+... ...++.++|++|++.+++ .||+||+.+..... .....+..++.++++++.++|.+..+...+
T Consensus 82 i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~ 158 (267)
T PRK14237 82 ILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDLH 158 (267)
T ss_pred EEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhhc
Confidence 9999987632 123567999999988877 69999998864322 112233445567889999998643222222
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEE
Q 000523 993 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1072 (1445)
Q Consensus 993 ~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l 1072 (1445)
. .+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||+++|+++ ++.+.+|++++|
T Consensus 159 ~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l 235 (267)
T PRK14237 159 K-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFF 235 (267)
T ss_pred C-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEE
Confidence 2 256899999999999999999999999999999999999999999999985 4799999999987 578899999999
Q ss_pred ecCcEEEEEcCC
Q 000523 1073 KRGGQEIYVGPL 1084 (1445)
Q Consensus 1073 ~~gG~~~y~G~~ 1084 (1445)
++ |+++..|+.
T Consensus 236 ~~-G~i~~~g~~ 246 (267)
T PRK14237 236 YL-GDLIEYDKT 246 (267)
T ss_pred EC-CEEEEeCCH
Confidence 85 799999986
No 314
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-34 Score=330.86 Aligned_cols=204 Identities=23% Similarity=0.349 Sum_probs=166.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC-------ccceEEEEcCCCC-C
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHDN-H 237 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~-~ 237 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .
T Consensus 21 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (280)
T PRK13649 21 RALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQ 97 (280)
T ss_pred ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhhh
Confidence 4999999999999999999999999999999999999998 999999999875421 1356999999862 3
Q ss_pred CCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcc-cccccc
Q 000523 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTMV 316 (1445)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~v 316 (1445)
+...||+||+.|.....+... .+....++++++.+||.. ..+.
T Consensus 98 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~-- 141 (280)
T PRK13649 98 LFEETVLKDVAFGPQNFGVSQ----------------------------------EEAEALAREKLALVGISESLFEK-- 141 (280)
T ss_pred hccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhC--
Confidence 445799999988643221100 001123566788899963 3444
Q ss_pred cccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEE
Q 000523 317 GDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDII 396 (1445)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ii 396 (1445)
.++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+++|+++
T Consensus 142 ---~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiiivsH~~~~~~~~~d~i~ 216 (280)
T PRK13649 142 ---NPFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-S-GMTIVLVTHLMDDVANYADFVY 216 (280)
T ss_pred ---CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhCCEEE
Confidence 3456999999999999999999999999999999999999999999998753 3 4556667788888999999999
Q ss_pred EecCCeEEEecChhHHH
Q 000523 397 LLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1445)
+|++|++++.|+.+++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 217 VLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEECCEEEEeCCHHHHh
Confidence 99999999999988764
No 315
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-34 Score=325.19 Aligned_cols=200 Identities=25% Similarity=0.398 Sum_probs=166.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 4899999999999999999999999999999999999998 9999999988754322 457999999877765 69
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc-cccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMVGDEMI 321 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 321 (1445)
|+||+.++....+ . ....++++++.+||+ +..+. .+
T Consensus 93 v~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~-----~~ 129 (241)
T PRK14250 93 VKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATR-----DV 129 (241)
T ss_pred HHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhC-----Cc
Confidence 9999987532110 0 001245678888996 33443 34
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
..||||||||++||++++.+|++++|||||+|||..++..+.+.|+++.... +++|+.++|+..++.+.+|+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKM-NLTVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhC-CCEEEEEeccHHHHHHhCCEEEEEeCC
Confidence 5699999999999999999999999999999999999999999999875422 445666788888999999999999999
Q ss_pred eEEEecChhHHH
Q 000523 402 QIVYQGPRELVL 413 (1445)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1445)
++++.|+.+++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999988763
No 316
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.3e-34 Score=365.88 Aligned_cols=256 Identities=23% Similarity=0.333 Sum_probs=194.3
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.++.....+|+.+.++.+++. . +....+.+...++++|+++.++.
T Consensus 284 ~~~~~~~~~ri~~~l~~~~~~-----~---~~~~~~~~~~~i~~~~v~~~y~~--------------------------- 328 (544)
T TIGR01842 284 FSGARQAYKRLNELLANYPSR-----D---PAMPLPEPEGHLSVENVTIVPPG--------------------------- 328 (544)
T ss_pred HHHHHHHHHHHHHHHhCCccc-----c---CCCCCCCCCCeEEEEEEEEEcCC---------------------------
Confidence 478888899998888765541 0 01112223457999999998742
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1445)
.+.++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|+
T Consensus 329 -----~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~ 400 (544)
T TIGR01842 329 -----GKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPT---SGSVRLDGADLKQWDRETFGKHIGYLPQD 400 (544)
T ss_pred -----CCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEehhhCCHHHHhhheEEecCC
Confidence 1124899999999999999999999999999999999999998 9999999999876543 4689999998
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
+.+++ .|++||+.++.. ....+.+.++++.. ..++.++ .|++..||
T Consensus 401 ~~lf~-~ti~~Ni~~~~~----~~~~~~~~~~~~~~---------------------------~~~~~i~--~l~~gl~t 446 (544)
T TIGR01842 401 VELFP-GTVAENIARFGE----NADPEKIIEAAKLA---------------------------GVHELIL--RLPDGYDT 446 (544)
T ss_pred ccccc-ccHHHHHhccCC----CCCHHHHHHHHHHh---------------------------ChHHHHH--hCcccccc
Confidence 76665 599999985421 11111111111110 1122333 35666789
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.+|+.+ ..||||||||++||||++++|++++|||||+|||+.++..+.+.|+++.. .++|+++ ++|..+ ..+.||+
T Consensus 447 ~~~~~g-~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~-ith~~~-~~~~~d~ 522 (544)
T TIGR01842 447 VIGPGG-ATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKA-RGITVVV-ITHRPS-LLGCVDK 522 (544)
T ss_pred ccCCCc-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhh-CCCEEEE-EeCCHH-HHHhCCE
Confidence 998754 56999999999999999999999999999999999999999999987642 3455555 455544 5678999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|++++.|+++++.+
T Consensus 523 i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 523 ILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred EEEEECCEEEeeCCHHHHhh
Confidence 99999999999999988753
No 317
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-34 Score=323.96 Aligned_cols=220 Identities=21% Similarity=0.278 Sum_probs=177.9
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCC--CC-eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 922 (1445)
.+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 477888887763 2369999999999999999999999999999999999864 21 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.++.. ..+++.++|++|+..+++..|++||+.+...... .....+.++.++++++.+++.+........ .+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLKS-NAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhhC-CcC
Confidence 87632 2346679999999999999999999987643321 112233345678899999986421111111 246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999975 689999999986 57788999999985 79
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 9999985
No 318
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.5e-34 Score=327.79 Aligned_cols=204 Identities=25% Similarity=0.350 Sum_probs=169.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc----------------CccceEE
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF----------------VPQRTAA 229 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~----------------~~~~~~~ 229 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++
T Consensus 19 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 95 (257)
T PRK10619 19 EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLT 95 (257)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhceE
Confidence 4999999999999999999999999999999999999998 99999999876421 1135799
Q ss_pred EEcCCCCCCCCCCHHHHHHHhHH-hcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCC
Q 000523 230 YISQHDNHIGEMTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL 308 (1445)
Q Consensus 230 yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL 308 (1445)
|++|++.+++.+||+||+.++.. ..+.. ..+....+.++++.+||
T Consensus 96 ~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl 141 (257)
T PRK10619 96 MVFQHFNLWSHMTVLENVMEAPIQVLGLS----------------------------------KQEARERAVKYLAKVGI 141 (257)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhCCCC----------------------------------HHHHHHHHHHHHHHcCC
Confidence 99999988889999999987532 11100 00112235678889999
Q ss_pred cccc-cccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchh
Q 000523 309 DVCA-DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPE 387 (1445)
Q Consensus 309 ~~~~-dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~ 387 (1445)
++.. + +..+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..+
T Consensus 142 ~~~~~~-----~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsH~~~~ 214 (257)
T PRK10619 142 DERAQG-----KYPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-E-GKTMVVVTHEMGF 214 (257)
T ss_pred Chhhhh-----CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHH
Confidence 7643 3 33457999999999999999999999999999999999999999999998754 3 4555667888888
Q ss_pred HHhhcCeEEEecCCeEEEecChhHHH
Q 000523 388 TYDLFDDIILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 388 ~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1445)
+..+||+|++|++|++++.|+++++.
T Consensus 215 ~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 215 ARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 99999999999999999999988764
No 319
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.1e-34 Score=321.12 Aligned_cols=195 Identities=24% Similarity=0.335 Sum_probs=163.1
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC------ccceEEEEcCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV------PQRTAAYISQHDNHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~------~~~~~~yv~Q~d~~~~ 239 (1445)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (222)
T PRK10908 16 QALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLM 92 (222)
T ss_pred eEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCccccc
Confidence 4999999999999999999999999999999999999998 999999999876432 1357999999988889
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
.+||+||+.+.....+... ++....++.+++.+||++..++.+
T Consensus 93 ~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 135 (222)
T PRK10908 93 DRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKNFP--- 135 (222)
T ss_pred cccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc---
Confidence 9999999988654322100 001123456788899986655443
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +++++.++|+..++...+|+|++|+
T Consensus 136 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 211 (222)
T PRK10908 136 --IQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-V-GVTVLMATHDIGLISRRSYRMLTLS 211 (222)
T ss_pred --hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3 4566668888899999999999999
Q ss_pred CCeEE
Q 000523 400 DGQIV 404 (1445)
Q Consensus 400 ~G~iv 404 (1445)
+|+++
T Consensus 212 ~G~i~ 216 (222)
T PRK10908 212 DGHLH 216 (222)
T ss_pred CCEEc
Confidence 99985
No 320
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.8e-34 Score=328.76 Aligned_cols=206 Identities=26% Similarity=0.343 Sum_probs=169.9
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCC--C
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHD--N 236 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1445)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++ .
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 100 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSA 100 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhhh
Confidence 46999999999999999999999999999999999999998 9999999998765322 35699999986 4
Q ss_pred CCCCCCHHHHHHHhHHhc-CCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc-ccccc
Q 000523 237 HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADT 314 (1445)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1445)
+.+.+||+||+.+..... +.. ..+....++++++.+||+ ...+.
T Consensus 101 ~~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 101 VNPRMTVRQIIGEPLRHLTSLD----------------------------------ESEQKARIAELLDMVGLRSEDADK 146 (265)
T ss_pred cCCCCCHHHHHHHHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCChhhhhC
Confidence 667899999998754211 000 001122456788899995 45554
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
. ++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+...+.+++|+
T Consensus 147 ~-----~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~-~~g~tiiivsH~~~~~~~~~d~ 220 (265)
T TIGR02769 147 L-----PRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQ-AFGTAYLFITHDLRLVQSFCQR 220 (265)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEeCCHHHHHHHhcE
Confidence 3 456999999999999999999999999999999999999999999998764 3345566678888899999999
Q ss_pred EEEecCCeEEEecChhHHH
Q 000523 395 IILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1445)
+++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999998774
No 321
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=2.9e-34 Score=340.38 Aligned_cols=203 Identities=22% Similarity=0.318 Sum_probs=175.5
Q ss_pred CceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCcc----CCc---cc---c-cceEEEec
Q 000523 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP----KKQ---ET---F-ARISGYCE 938 (1445)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~----~~~---~~---~-~~~~gyv~ 938 (1445)
+...+|+|+||+|++||+++|+|+||||||||+++|+|... +..|+|.++|.+ +.. .. . ++.++|++
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 34679999999999999999999999999999999999876 458999999952 211 11 1 24699999
Q ss_pred cCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCC
Q 000523 939 QNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1018 (1445)
Q Consensus 939 Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~ 1018 (1445)
|+..++|.+||+||+.|+...+ ....+++++.++++++.++|.+..+..+ ..||||||||++|||+|+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999876443 2344556667899999999988777763 5799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1019 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1019 illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
||+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~ 249 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTP 249 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999764 899999999987 57899999999985 799999986
No 322
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=3.5e-34 Score=318.51 Aligned_cols=198 Identities=23% Similarity=0.298 Sum_probs=167.4
Q ss_pred EeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc-ccccceEEEeccCCCCCCCCCHHHH
Q 000523 874 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-ETFARISGYCEQNDIHSPFVTIYES 952 (1445)
Q Consensus 874 iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~Q~d~~~~~lTv~E~ 952 (1445)
.++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 3579999999999999999999999999999999876 458999999987643 2345679999999999999999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000523 953 LLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1032 (1445)
Q Consensus 953 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~ 1032 (1445)
+.+...... ... ...++.++++++.+++.+..+.. ++.||||||||++||++|+.+|++++|||||+|||+.
T Consensus 91 ~~~~~~~~~--~~~-~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--KLN-AEQQEKVVDAAQQVGIADYLDRL-----PEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--Ccc-HHHHHHHHHHHHHcCcHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 987543211 111 22344578899999998777765 3579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcC
Q 000523 1033 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGP 1083 (1445)
Q Consensus 1033 ~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~ 1083 (1445)
++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998764 899999999986 56788999999985 79988875
No 323
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=324.60 Aligned_cols=219 Identities=21% Similarity=0.264 Sum_probs=175.6
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC-CeEEEEEEEcCccC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-GYITGNITISGYPK 925 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~-~~~~G~i~i~g~~~ 925 (1445)
+.++|+++.+. .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.+.
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 45677777663 24699999999999999999999999999999999997532 24689999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000523 926 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 926 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1445)
.. ..+++.++|++|++.+++ .|++||+.+....+.... .....++.++++++.++|.+........ ..+.||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMIK-NKDEEEALVVDCLQKVGLFEEVKDKLKQ-NALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCccc-ChHHHHHHHHHHHHHcCCChhhhHHhcC-CcccCCHH
Confidence 43 234567999999988887 699999988654432111 1223344578899999995322111111 24679999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 223 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFG 223 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999864 899999999986 57788999999985 7999998
Q ss_pred CC
Q 000523 1083 PL 1084 (1445)
Q Consensus 1083 ~~ 1084 (1445)
+.
T Consensus 224 ~~ 225 (246)
T PRK14269 224 ES 225 (246)
T ss_pred CH
Confidence 75
No 324
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-34 Score=326.30 Aligned_cols=209 Identities=20% Similarity=0.300 Sum_probs=165.2
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCcC-----ccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 238 (1445)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|.. ..+|+|.++|.++.... .++.++|++|++.++
T Consensus 26 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 105 (258)
T PRK14268 26 QALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNPF 105 (258)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCccC
Confidence 48999999999999999999999999999999999987510 02899999998874321 235799999988777
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+ +||+||+.|+.+..+... + +....++++++.+|+........ +
T Consensus 106 ~-~tv~enl~~~~~~~~~~~--~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 149 (258)
T PRK14268 106 P-MSIYDNVAYGPRIHGANK--K--------------------------------DLDGVVENALRSAALWDETSDRL-K 149 (258)
T ss_pred c-ccHHHHHHHHHHHcCCCH--H--------------------------------HHHHHHHHHHHHcCCCcchhhhh-c
Confidence 7 899999998654322100 0 01123566778888742111111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
..++.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.+.+|+|++|
T Consensus 150 ~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~--~~-~tiiivsH~~~~~~~~~d~i~~l 226 (258)
T PRK14268 150 SPALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLK--KD-YTIVIVTHNMQQAARISDYTGFF 226 (258)
T ss_pred CChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--hC-CEEEEEECCHHHHHHhCCEEEEE
Confidence 3445699999999999999999999999999999999999999999999874 23 55666788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|++++.|+++++.
T Consensus 227 ~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 227 LMGELIEFGQTRQIF 241 (258)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988763
No 325
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=4.9e-34 Score=322.44 Aligned_cols=212 Identities=26% Similarity=0.386 Sum_probs=178.9
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
+++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +..|+|.++|.++..
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCc
Confidence 4667766653 2469999999999999999999999999999999999875 458999999987653
Q ss_pred c-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000523 928 E-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1006 (1445)
Q Consensus 928 ~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1006 (1445)
. ..++.++|++|++.+++..|+.||+.+....+. .......+.++++++.+++.+..+.. .+.||+||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRY-----PNQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCC-----hhhCCHHHHHH
Confidence 2 234679999999988889999999987654331 22233345678899999998777765 35799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1007 l~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998765 899999999986 57888999999985 789999885
No 326
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=5e-34 Score=320.82 Aligned_cols=197 Identities=27% Similarity=0.335 Sum_probs=161.9
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~~~ 238 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 4999999999999999999999999999999999999998 9999999998765432 24699999998888
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+.+||.||+.+.....+.. . .+....++++++.+||++..+..+
T Consensus 101 ~~~tv~~~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 144 (228)
T PRK10584 101 PTLNALENVELPALLRGES-S---------------------------------RQSRNGAKALLEQLGLGKRLDHLP-- 144 (228)
T ss_pred CCcCHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHcCCHhHhhCCh--
Confidence 9999999998864322110 0 001224567889999987666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++...+ ++|+.++|+..++ +.+|++++|
T Consensus 145 ---~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~-~~~d~i~~l 219 (228)
T PRK10584 145 ---AQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHG-TTLILVTHDLQLA-ARCDRRLRL 219 (228)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHH-HhCCEEEEE
Confidence 46999999999999999999999999999999999999999999998764334 4555567777776 459999999
Q ss_pred cCCeEEEe
Q 000523 399 SDGQIVYQ 406 (1445)
Q Consensus 399 ~~G~iv~~ 406 (1445)
++|++++.
T Consensus 220 ~~g~i~~~ 227 (228)
T PRK10584 220 VNGQLQEE 227 (228)
T ss_pred ECCEEEec
Confidence 99999753
No 327
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.9e-34 Score=320.87 Aligned_cols=205 Identities=28% Similarity=0.366 Sum_probs=171.7
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
++|+|+|++++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++.+... ++.++|++|++..++.+|++
T Consensus 14 ~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (232)
T cd03300 14 VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVF 90 (232)
T ss_pred eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcHH
Confidence 4999999999999999999999999999999999999998 9999999998765432 46799999998888889999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.+.....+.. . ......++++++.+||++..++.+ ..|
T Consensus 91 ~nl~~~~~~~~~~--~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~l 131 (232)
T cd03300 91 ENIAFGLRLKKLP--K--------------------------------AEIKERVAEALDLVQLEGYANRKP-----SQL 131 (232)
T ss_pred HHHHHHHHhcCCC--H--------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hhC
Confidence 9998865432210 0 001123567888999987666544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1445)
|||||||++||++|+.+|++++|||||+|||..++..+.+.|+++.... +.+|+.++|+..++.+.+|++++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~-~~tiii~sh~~~~~~~~~d~i~~l~~G~~~ 210 (232)
T cd03300 132 SGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKEL-GITFVFVTHDQEEALTMSDRIAVMNKGKIQ 210 (232)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999876422 445555777888899999999999999999
Q ss_pred EecChhHHH
Q 000523 405 YQGPRELVL 413 (1445)
Q Consensus 405 ~~G~~~~~~ 413 (1445)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (232)
T cd03300 211 QIGTPEEIY 219 (232)
T ss_pred ecCCHHHHH
Confidence 999887664
No 328
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-34 Score=328.82 Aligned_cols=204 Identities=28% Similarity=0.378 Sum_probs=167.8
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCC--cC---ccceEEEEcCCCC-CCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE--FV---PQRTAAYISQHDN-HIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~--~~---~~~~~~yv~Q~d~-~~~ 239 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .. .++.++|++|++. .++
T Consensus 15 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (271)
T PRK13638 15 PVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIF 91 (271)
T ss_pred ccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhccc
Confidence 3899999999999999999999999999999999999998 9999999998742 11 1357999999864 345
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
..|+.||+.+..+..+... .+....++++++.+||++..++.+
T Consensus 92 ~~~~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 134 (271)
T PRK13638 92 YTDIDSDIAFSLRNLGVPE----------------------------------AEITRRVDEALTLVDAQHFRHQPI--- 134 (271)
T ss_pred cccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhcCCc---
Confidence 6789999988643221100 001123566788899987666544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.+++|++++|+
T Consensus 135 --~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tii~vtH~~~~~~~~~d~i~~l~ 210 (271)
T PRK13638 135 --QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-Q-GNHVIISSHDIDLIYEISDAVYVLR 210 (271)
T ss_pred --hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999998754 3 4456667888889999999999999
Q ss_pred CCeEEEecChhHHH
Q 000523 400 DGQIVYQGPRELVL 413 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1445)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~g~~~~~~ 224 (271)
T PRK13638 211 QGQILTHGAPGEVF 224 (271)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999988764
No 329
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.3e-32 Score=357.01 Aligned_cols=209 Identities=28% Similarity=0.368 Sum_probs=177.9
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCcc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 924 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1445)
..++++|++|+++. .++.+|+|+|++|+|||++||+|+||||||||+|+|+|..+ +.+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEE
Confidence 46999999999852 12469999999999999999999999999999999999876 458999999998
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000523 925 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 994 (1445)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 994 (1445)
+.+ ..+++.+|||+|++.+++ -|++||+.++. + .+. +.++++++..++.+.. |+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~~----e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LTL----DEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CCH----HHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 754 457788999999998876 59999998742 1 222 3467888888877543 5566654
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec
Q 000523 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|++++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 3689999999999999999999999999999999999999999999886 589999999985 4677999999985
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|+++..|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 899999985
No 330
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-34 Score=324.97 Aligned_cols=212 Identities=24% Similarity=0.289 Sum_probs=168.8
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCcC---ccceEEEEcCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFV---PQRTAAYISQHDNHIGE 240 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 240 (1445)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+++.
T Consensus 17 ~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~ 96 (250)
T PRK14247 17 EVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIPN 96 (250)
T ss_pred eeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCCC
Confidence 4899999999999999999999999999999999998741 012899999999875432 23579999999888899
Q ss_pred CCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccc
Q 000523 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1445)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1445)
+||+||+.++.+..+.... ..+....++++++.+||.+..+.. -+..
T Consensus 97 ~tv~enl~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~-~~~~ 143 (250)
T PRK14247 97 LSIFENVALGLKLNRLVKS--------------------------------KKELQERVRWALEKAQLWDEVKDR-LDAP 143 (250)
T ss_pred CcHHHHHHHHHHhccccCC--------------------------------HHHHHHHHHHHHHHcCCCcchhhh-hcCC
Confidence 9999999986533211000 001122356678888886421111 1234
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000523 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1445)
Q Consensus 321 ~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1445)
+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ ++++.++|+..++.+.+|++++|++
T Consensus 144 ~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~~ 220 (250)
T PRK14247 144 AGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELK--KD-MTIVLVTHFPQQAARISDYVAFLYK 220 (250)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCEEEEEEC
Confidence 55799999999999999999999999999999999999999999999874 33 5566678888888999999999999
Q ss_pred CeEEEecChhHHH
Q 000523 401 GQIVYQGPRELVL 413 (1445)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1445)
|++++.|+.+++.
T Consensus 221 G~i~~~g~~~~~~ 233 (250)
T PRK14247 221 GQIVEWGPTREVF 233 (250)
T ss_pred CeEEEECCHHHHH
Confidence 9999999988764
No 331
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-34 Score=330.67 Aligned_cols=208 Identities=25% Similarity=0.343 Sum_probs=168.7
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCC-CCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1445)
++|+|+|++|++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++..... ++.++|++|++. .++.+
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 100 (282)
T PRK13640 21 PALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGA 100 (282)
T ss_pred cceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccC
Confidence 48999999999999999999999999999999999999871123999999998764322 357999999864 67789
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||+||+.|..+..+.. .++...+++.+++.+||++..++. +
T Consensus 101 tv~enl~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~L~~~~~~~-----~ 141 (282)
T PRK13640 101 TVGDDVAFGLENRAVP----------------------------------RPEMIKIVRDVLADVGMLDYIDSE-----P 141 (282)
T ss_pred CHHHHHHhhHHhCCCC----------------------------------HHHHHHHHHHHHHHCCChhHhcCC-----c
Confidence 9999998864322110 001123456788999998766644 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
+.||||||||++||+||+.+|++|+|||||+|||..++..+.+.|+++.... +++|+.++|+..++ ..||++++|++|
T Consensus 142 ~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvli~tH~~~~~-~~~d~i~~l~~G 219 (282)
T PRK13640 142 ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKN-NLTVISITHDIDEA-NMADQVLVLDDG 219 (282)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHH-HhCCEEEEEECC
Confidence 5799999999999999999999999999999999999999999999876432 44555567777777 579999999999
Q ss_pred eEEEecChhHHHH
Q 000523 402 QIVYQGPRELVLE 414 (1445)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1445)
++++.|+++++.+
T Consensus 220 ~i~~~g~~~~~~~ 232 (282)
T PRK13640 220 KLLAQGSPVEIFS 232 (282)
T ss_pred EEEEeCCHHHHhc
Confidence 9999999988753
No 332
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-34 Score=333.97 Aligned_cols=223 Identities=18% Similarity=0.224 Sum_probs=179.8
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC-C-eEEEEEEEcCcc
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG-G-YITGNITISGYP 924 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~-~-~~~G~i~i~g~~ 924 (1445)
++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|..++ + +.+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 6788888776421 1124699999999999999999999999999999999997642 2 368999999987
Q ss_pred CCcc---cc----cceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000523 925 KKQE---TF----ARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 995 (1445)
Q Consensus 925 ~~~~---~~----~~~~gyv~Q~d--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 995 (1445)
+... .. ++.++|++|++ .+.|.+|+.+++........ ....++.++.+.++++.++|.+..+.+- ..
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l~--~~ 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRLD--VY 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHHh--CC
Confidence 6431 11 23699999997 47888999988866543321 1234555667899999999975322111 12
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEec
Q 000523 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 996 ~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
+..|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|+|++||+++ .+.+.+|++++|++
T Consensus 151 p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~vm~~ 229 (326)
T PRK11022 151 PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIVMYA 229 (326)
T ss_pred chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC
Confidence 468999999999999999999999999999999999999999999999976 4899999999986 47788999999985
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|+++..|+.
T Consensus 230 -G~ive~g~~ 238 (326)
T PRK11022 230 -GQVVETGKA 238 (326)
T ss_pred -CEEEEECCH
Confidence 899999985
No 333
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-34 Score=324.68 Aligned_cols=203 Identities=27% Similarity=0.351 Sum_probs=167.6
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCC------c---CccceEEEEcCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE------F---VPQRTAAYISQHDN 236 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~------~---~~~~~~~yv~Q~d~ 236 (1445)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 4999999999999999999999999999999999999998 9999999987631 1 11357999999998
Q ss_pred CCCCCCHHHHHHHhH-HhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccc
Q 000523 237 HIGEMTVRETLAFSA-RCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1445)
Q Consensus 237 ~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1445)
+++.+||+||+.+.. ...+... .+....++++++.+||+...+..
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLSK----------------------------------DQALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCC
Confidence 999999999997532 1111000 00112456788899998766654
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
+ +.|||||||||+|||+|+.+|++++|||||+|||..++..+.+.|+++.. . +++++.++|+..++.+.+|++
T Consensus 139 ~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tii~~sh~~~~~~~~~d~i 211 (242)
T PRK11124 139 P-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-T-GITQVIVTHEVEVARKTASRV 211 (242)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhcCEE
Confidence 4 46999999999999999999999999999999999999999999998753 3 455666788888988999999
Q ss_pred EEecCCeEEEecChhHH
Q 000523 396 ILLSDGQIVYQGPRELV 412 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~~ 412 (1445)
++|++|+++++|+.+++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999988764
No 334
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=335.43 Aligned_cols=210 Identities=20% Similarity=0.290 Sum_probs=168.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
.+|+|+|++|++||+++|+|||||||||||++|+|..++. ...+|+|.++|.++... ..++.++||+|++.++
T Consensus 96 ~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~ 175 (329)
T PRK14257 96 HVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPF 175 (329)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccC
Confidence 4899999999999999999999999999999999998631 01289999999998632 2356799999988766
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+.||+||+.|+....+... .+ ..+..++.+++..+|.+..++.+++
T Consensus 176 -~~ti~eNi~~~~~~~~~~~-~~--------------------------------~~~~~~~~~l~~~~L~~~l~~~~~~ 221 (329)
T PRK14257 176 -EMSIFDNVAYGPRNNGIND-RK--------------------------------ILEKIVEKSLKSAALWDEVKDDLDK 221 (329)
T ss_pred -CCcHHHHHHhHHHhcCCCh-HH--------------------------------HHHHHHHHHHHHcCCcchhhhhhhC
Confidence 5899999998653321100 00 0111244566777776555556654
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
....|||||||||+|||||+.+|+||+|||||+|||+.+...+.++|+++.+ + .+++.++|....+.+.+|+|++|
T Consensus 222 -~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~-~Tii~iTH~l~~i~~~~Driivl 297 (329)
T PRK14257 222 -AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--K-YSIIIVTHSMAQAQRISDETVFF 297 (329)
T ss_pred -CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 4557999999999999999999999999999999999999999999998642 3 56666888888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|++++.|+++++.
T Consensus 298 ~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 298 YQGWIEEAGETKTIF 312 (329)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999999874
No 335
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-34 Score=329.17 Aligned_cols=215 Identities=24% Similarity=0.309 Sum_probs=179.5
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++|+++.+.. +++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 4788898877631 12468999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 926 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 926 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
.. ..+++.+||++|++. .++.+||+||+.+..... ....++.++.++++++.++|.+..++. ++.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKE-----PQNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCC-----cccCCH
Confidence 43 234667999999974 566789999998864322 123344455688999999998877766 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++ ++|||+++|+++. + ..+|++++|++ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999765 5899999999863 4 47999999985 78998
Q ss_pred EcCC
Q 000523 1081 VGPL 1084 (1445)
Q Consensus 1081 ~G~~ 1084 (1445)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 336
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.7e-34 Score=327.65 Aligned_cols=204 Identities=28% Similarity=0.395 Sum_probs=168.9
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc--C---ccceEEEEcCCCC-CCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF--V---PQRTAAYISQHDN-HIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~-~~~ 239 (1445)
.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... . .++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 4899999999999999999999999999999999999998 99999999987421 1 2357999999853 345
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
.+||+||+.++....+.. . .+....+.++++.+||.+..++.++
T Consensus 93 ~~tv~e~i~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~L~~~~~~~~~-- 136 (275)
T PRK13639 93 APTVEEDVAFGPLNLGLS-K---------------------------------EEVEKRVKEALKAVGMEGFENKPPH-- 136 (275)
T ss_pred cccHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCchhhcCChh--
Confidence 679999998764221100 0 0111235678899999877776544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+.||++++|+
T Consensus 137 ---~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 137 ---HLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 5999999999999999999999999999999999999999999998754 3 4556668888889999999999999
Q ss_pred CCeEEEecChhHHH
Q 000523 400 DGQIVYQGPRELVL 413 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1445)
+|++++.|+++++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999998874
No 337
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-34 Score=325.16 Aligned_cols=207 Identities=22% Similarity=0.313 Sum_probs=164.8
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC-----CCCCceeEEEEcCccCCCc--C---ccceEEEEcCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF--V---PQRTAAYISQHD 235 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d 235 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|..+ |+ +|+|.++|+++... . .++.++|++|++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 96 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARV---EGEILLDGENIYDPHVDVVELRRRVGMVFQKP 96 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCC---ceEEEECCEEccccccCHHHHhhcEEEEecCC
Confidence 48999999999999999999999999999999999864 35 89999999887532 1 145799999988
Q ss_pred CCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccc
Q 000523 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1445)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1445)
.+++ .||+||+.++....+.... ++....++.+++.+||.+...+.
T Consensus 97 ~~~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 142 (253)
T PRK14242 97 NPFP-KSIFENVAYGLRVNGVKDK---------------------------------AYLAERVERSLRHAALWDEVKDR 142 (253)
T ss_pred CCCc-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHH
Confidence 7777 5999999987543221000 00112345567778875422122
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
. ++.++.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.+++|+|
T Consensus 143 ~-~~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~tH~~~~~~~~~d~v 218 (253)
T PRK14242 143 L-HESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK--AR-YTIIIVTHNMQQAARVSDVT 218 (253)
T ss_pred h-hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CeEEEEEecHHHHHHhCCEE
Confidence 2 23456799999999999999999999999999999999999999999999873 33 45666788888999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000523 396 ILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1445)
++|++|++++.|+++++.
T Consensus 219 ~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 219 AFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999987763
No 338
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-34 Score=334.06 Aligned_cols=225 Identities=24% Similarity=0.250 Sum_probs=183.0
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-++++|+++.+...... . ...+...+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~-~--~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~--p~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGL-F--KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIET--PTGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCc-c--ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCC--CCCcEEEECCEEc
Confidence 47888998777432100 0 00123469999999999999999999999999999999999875 3589999999876
Q ss_pred Cc------ccccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000523 926 KQ------ETFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 996 (1445)
Q Consensus 926 ~~------~~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 996 (1445)
.. ..+++.++|++|++ .+.|.+||.+++........ .....+.++.+.++++.+||.+ ..+.. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINT--SLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 43 12456799999997 57889999999877544321 2334455667899999999963 44544 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecC
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~g 1075 (1445)
..||||||||++||+||+.+|++|++||||++||..++..+++.|+++.++ |.|||++||+++ .+.+.+|++++|++
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 679999999999999999999999999999999999999999999999764 899999999986 46678999999985
Q ss_pred cEEEEEcCC
Q 000523 1076 GQEIYVGPL 1084 (1445)
Q Consensus 1076 G~~~y~G~~ 1084 (1445)
|+++..|+.
T Consensus 231 G~ive~g~~ 239 (327)
T PRK11308 231 GRCVEKGTK 239 (327)
T ss_pred CEEEEECCH
Confidence 899999985
No 339
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=4.6e-34 Score=322.32 Aligned_cols=200 Identities=29% Similarity=0.403 Sum_probs=168.6
Q ss_pred ceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc--ccccceEEEec-cCCCCCCCC
Q 000523 871 KLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCE-QNDIHSPFV 947 (1445)
Q Consensus 871 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-Q~d~~~~~l 947 (1445)
.+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++ |++.+++.+
T Consensus 33 ~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 110 (236)
T cd03267 33 EVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWDL 110 (236)
T ss_pred CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCCC
Confidence 4579999999999999999999999999999999999875 458999999976432 23456799997 556677889
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000523 948 TIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1027 (1445)
Q Consensus 948 Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTs 1027 (1445)
|++|++.+...++. ...++..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+
T Consensus 111 tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~ 182 (236)
T cd03267 111 PVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPTI 182 (236)
T ss_pred cHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 99999988654432 223334456788999999988777663 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1028 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1028 gLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 183 ~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 183 GLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 99999999999999998764 899999999986 57788999999985 7887765
No 340
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.2e-34 Score=376.25 Aligned_cols=257 Identities=24% Similarity=0.393 Sum_probs=196.0
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.++.+..++|+.++++.++|. .. .+....+.....++++||++.++.
T Consensus 421 ~~~~~~~~~ri~~~l~~~~e~-----~~-~~~~~~~~~~~~i~~~~vsf~y~~--------------------------- 467 (694)
T TIGR01846 421 FQQTGIALERLGDILNSPTEP-----RS-AGLAALPELRGAITFENIRFRYAP--------------------------- 467 (694)
T ss_pred HHHHHHHHHHHHHHHcCCCCc-----cC-CCCCCCCCCCCeEEEEEEEEEcCC---------------------------
Confidence 568888899999888776551 00 011111222457999999999742
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1445)
....+|+|+|++++||+.++|+|+||||||||+|+|+|.++|+ +|+|++||+++++... ++.++||+|+
T Consensus 468 -----~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~---~G~I~idg~~i~~~~~~~~r~~i~~v~q~ 539 (694)
T TIGR01846 468 -----DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQ---HGQVLVDGVDLAIADPAWLRRQMGVVLQE 539 (694)
T ss_pred -----CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEehhhCCHHHHHHhCeEEccC
Confidence 1124899999999999999999999999999999999999998 9999999999887654 4689999997
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
+.++ +.|++||+.++.. ....+.+.++++.. + .++.+ -.|+++.||
T Consensus 540 ~~lf-~~ti~eNi~~~~~----~~~~~~i~~a~~~~---~------------------------l~~~i--~~lp~gl~t 585 (694)
T TIGR01846 540 NVLF-SRSIRDNIALCNP----GAPFEHVIHAAKLA---G------------------------AHDFI--SELPQGYNT 585 (694)
T ss_pred Ceeh-hhhHHHHHhcCCC----CCCHHHHHHHHHHc---C------------------------hHHHH--HhCcCccCc
Confidence 6555 5799999987521 11112222221111 0 11122 236778899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.+|+.+ .+||||||||++|||||+++|++++|||||++||+.++..+.+.|++.. .+.|+|+ ++|..+ ....||+
T Consensus 586 ~i~~~g-~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~-itH~~~-~~~~~d~ 660 (694)
T TIGR01846 586 EVGEKG-ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC--RGRTVII-IAHRLS-TVRACDR 660 (694)
T ss_pred EecCCC-CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh--CCCEEEE-EeCChH-HHHhCCE
Confidence 999765 5799999999999999999999999999999999999999999998863 3455555 555544 4567999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|+++++|+++++.+
T Consensus 661 ii~l~~G~i~~~g~~~~l~~ 680 (694)
T TIGR01846 661 IIVLEKGQIAESGRHEELLA 680 (694)
T ss_pred EEEEeCCEEEEeCCHHHHHH
Confidence 99999999999999999865
No 341
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4.4e-34 Score=324.51 Aligned_cols=212 Identities=26% Similarity=0.330 Sum_probs=168.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCC--CCCCCceeEEEEcCccCCCcCc----cceEEEEcCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL--DPTLKVSGTVTYNGHDMDEFVP----QRTAAYISQHDNHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~----~~~~~yv~Q~d~~~~ 239 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|.++..... +..++|++|++.+++
T Consensus 14 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (243)
T TIGR01978 14 EILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEIP 90 (243)
T ss_pred EEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeeccccccC
Confidence 4899999999999999999999999999999999995 677 9999999998765432 234899999999999
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcc-cccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV-CADTMVGD 318 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vg~ 318 (1445)
.+|++|++.+......... +.... ...+....++.+++.+||+. ..+..++
T Consensus 91 ~~t~~~~~~~~~~~~~~~~------------------~~~~~---------~~~~~~~~~~~~l~~~~l~~~~~~~~~~- 142 (243)
T TIGR01978 91 GVSNLEFLRSALNARRSAR------------------GEEPL---------DLLDFLKLLKAKLALLGMDEEFLNRSVN- 142 (243)
T ss_pred CcCHHHHHHHHHHHhhccc------------------ccccc---------cHHHHHHHHHHHHHHcCCchhhcccccc-
Confidence 9999999987643211000 00000 00111234677899999973 4454332
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhh-cCeEEE
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL-FDDIIL 397 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~-~D~iil 397 (1445)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++... +|++++
T Consensus 143 ---~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~vsH~~~~~~~~~~d~i~~ 217 (243)
T TIGR01978 143 ---EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-P-DRSFLIITHYQRLLNYIKPDYVHV 217 (243)
T ss_pred ---cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-C-CcEEEEEEecHHHHHhhcCCeEEE
Confidence 14999999999999999999999999999999999999999999998753 3 44566678888888888 899999
Q ss_pred ecCCeEEEecChhHHH
Q 000523 398 LSDGQIVYQGPRELVL 413 (1445)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1445)
|++|++++.|+++++.
T Consensus 218 l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 218 LLDGRIVKSGDVELAK 233 (243)
T ss_pred EeCCEEEEecCHHHhc
Confidence 9999999999988654
No 342
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-34 Score=338.24 Aligned_cols=212 Identities=27% Similarity=0.440 Sum_probs=177.7
Q ss_pred CCceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcC
Q 000523 843 EPHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISG 922 (1445)
Q Consensus 843 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g 922 (1445)
.+..++|+||++++. +++++|++|||+|++||.+||+|+|||||||++++|.+... .+|+|.|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 455799999999885 23469999999999999999999999999999999998764 479999999
Q ss_pred ccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------cccccc
Q 000523 923 YPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVG 992 (1445)
Q Consensus 923 ~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg 992 (1445)
.++++ +.+|+.+||||||..++. -||.+|+.|+. ++.+.++ |-++.+..++.+. .++.+|
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~ee----V~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDEE----VVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHHH----HHHHHHHcCcHHHHHhccccchhhHh
Confidence 98754 567889999999887765 69999999862 3344333 4455555555543 455677
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEE
Q 000523 993 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1072 (1445)
Q Consensus 993 ~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l 1072 (1445)
..| .-|||||||||+|||+++++|+|+++|||||.||..+...+++.+++. ..|+|+|++.|+. +....||+|++|
T Consensus 483 erG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ERG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVL 558 (591)
T ss_pred hcc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEE
Confidence 664 469999999999999999999999999999999999999999999994 3589999999986 468889999999
Q ss_pred ecCcEEEEEcCC
Q 000523 1073 KRGGQEIYVGPL 1084 (1445)
Q Consensus 1073 ~~gG~~~y~G~~ 1084 (1445)
++ |++...|+-
T Consensus 559 ~n-G~v~e~gth 569 (591)
T KOG0057|consen 559 DN-GTVKEYGTH 569 (591)
T ss_pred EC-CeeEEeccH
Confidence 96 789988885
No 343
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=358.90 Aligned_cols=220 Identities=20% Similarity=0.306 Sum_probs=184.4
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++++. ++.+|+|||++|++||+++|+||||||||||+++|+|..++++.+|+|.++|.+..
T Consensus 6 l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 72 (506)
T PRK13549 6 LEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQ 72 (506)
T ss_pred EEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 77888887763 24699999999999999999999999999999999998764336899999998764
Q ss_pred ccc----ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000523 927 QET----FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 927 ~~~----~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1445)
... .++.+||++|++.+++.+||+|++.+....+.....+.+..++.++++++.+++.+..+..+ ..||||
T Consensus 73 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 147 (506)
T PRK13549 73 ASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGLG 147 (506)
T ss_pred CCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCHH
Confidence 321 24569999999988899999999988654321111223334456889999999987777653 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|.|||+++|++. .+.+.+|++++|++ |++++.|
T Consensus 148 qkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~ 225 (506)
T PRK13549 148 QQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGTR 225 (506)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeeec
Confidence 999999999999999999999999999999999999999999877999999999986 57788999999985 7999999
Q ss_pred CCCC
Q 000523 1083 PLGR 1086 (1445)
Q Consensus 1083 ~~~~ 1086 (1445)
+..+
T Consensus 226 ~~~~ 229 (506)
T PRK13549 226 PAAG 229 (506)
T ss_pred cccc
Confidence 8754
No 344
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=6.9e-34 Score=334.46 Aligned_cols=224 Identities=19% Similarity=0.288 Sum_probs=182.1
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC-eEEEEEEEcCcc
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YITGNITISGYP 924 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~~~G~i~i~g~~ 924 (1445)
-++++|++..+... .+...+|+|||++|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 47889988776421 12356999999999999999999999999999999999987531 238999999987
Q ss_pred CCc---cc---cc-ceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000523 925 KKQ---ET---FA-RISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPG 995 (1445)
Q Consensus 925 ~~~---~~---~~-~~~gyv~Q~d--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 995 (1445)
+.. .. ++ +.++|++|++ .+.|.+|+.+++........ ....++..+++.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 643 11 22 4799999997 67889999999877654332 234445556788999999997533221 1 22
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEec
Q 000523 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 996 ~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
+..||||||||++||+||+.+|++|++||||+|||+.++..+++.|+++.++ |.|+|++|||++ .+.+.+|++++|++
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 5689999999999999999999999999999999999999999999999765 899999999986 46778999999985
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|+++..|+.
T Consensus 238 -G~ive~g~~ 246 (330)
T PRK09473 238 -GRTMEYGNA 246 (330)
T ss_pred -CEEEEECCH
Confidence 899999985
No 345
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=328.40 Aligned_cols=219 Identities=26% Similarity=0.355 Sum_probs=177.0
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC------eEEEEEEE
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG------YITGNITI 920 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~------~~~G~i~i 920 (1445)
++++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 46777776653 246999999999999999999999999999999999986532 12799999
Q ss_pred cCccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000523 921 SGYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 996 (1445)
Q Consensus 921 ~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1445)
+|.+... ..+++.++|++|++..++.+||+|++.+....... ........++.++++++.+++.+..+.. +
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----V 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----c
Confidence 9987642 23455689999998766679999999875321110 0111123345678899999998766654 4
Q ss_pred CcCCHHHHHHHHHHHHHh---------hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhh
Q 000523 997 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAF 1066 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~---------~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~f 1066 (1445)
..||||||||++||++|+ .+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ ++.+.+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 579999999999999999 599999999999999999999999999998765 899999999986 577889
Q ss_pred ceEeEEecCcEEEEEcCCC
Q 000523 1067 DELFLMKRGGQEIYVGPLG 1085 (1445)
Q Consensus 1067 D~v~~l~~gG~~~y~G~~~ 1085 (1445)
|++++|++ |++++.|+..
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999985 7999999863
No 346
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3e-33 Score=312.63 Aligned_cols=201 Identities=19% Similarity=0.301 Sum_probs=152.6
Q ss_pred CceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCc
Q 000523 844 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 923 (1445)
Q Consensus 844 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 923 (1445)
|..+..+||+|.++ +.++++++++|-|.--..+||+||||-||||||++|.|..++ ..|+.+-|
T Consensus 584 PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKn-- 647 (807)
T KOG0066|consen 584 PPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKN-- 647 (807)
T ss_pred CCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhcc--
Confidence 44678899988875 346799999999999999999999999999999999998763 45665432
Q ss_pred cCCcccccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 924 PKKQETFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 924 ~~~~~~~~~~~gyv~Q~d~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
.+-.+|+..|+.. +...-|.-|.|.- . .+ .+.++ ....+-.+||...++++- +..|||
T Consensus 648 ------hrL~iG~FdQh~~E~L~~Eetp~EyLqr---~-FN--lpyq~----ARK~LG~fGL~sHAHTik----ikdLSG 707 (807)
T KOG0066|consen 648 ------HRLRIGWFDQHANEALNGEETPVEYLQR---K-FN--LPYQE----ARKQLGTFGLASHAHTIK----IKDLSG 707 (807)
T ss_pred ------ceeeeechhhhhHHhhccccCHHHHHHH---h-cC--CChHH----HHHHhhhhhhhhccceEe----eeecCC
Confidence 2335788877632 3344566665532 1 11 22222 345678889988888863 567999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
|||-||++|..-++.|+||+|||||++||..+...+-++|+++ ...||+++||-.. |.+--+.++++.+.|.---.
T Consensus 708 GQKaRValaeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eId 783 (807)
T KOG0066|consen 708 GQKARVALAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEID 783 (807)
T ss_pred cchHHHHHHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhcc
Confidence 9999999999999999999999999999999999999999887 4579999999764 55666778888776543344
Q ss_pred cCC
Q 000523 1082 GPL 1084 (1445)
Q Consensus 1082 G~~ 1084 (1445)
|..
T Consensus 784 GdF 786 (807)
T KOG0066|consen 784 GDF 786 (807)
T ss_pred ccH
Confidence 443
No 347
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-34 Score=332.32 Aligned_cols=205 Identities=20% Similarity=0.293 Sum_probs=166.3
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCC----c----CccceEEEEcCCCC-
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDE----F----VPQRTAAYISQHDN- 236 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~----~----~~~~~~~yv~Q~d~- 236 (1445)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 25 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~~ 101 (289)
T PRK13645 25 KALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPEY 101 (289)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcch
Confidence 4999999999999999999999999999999999999998 9999999988642 1 12357999999863
Q ss_pred CCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc-cccccc
Q 000523 237 HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTM 315 (1445)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1445)
.+...||+||+.|+....+.. . .+....++.+++.++|+ +..++.
T Consensus 102 ~~~~~tv~enl~~~~~~~~~~-~---------------------------------~~~~~~~~~ll~~~~L~~~~~~~~ 147 (289)
T PRK13645 102 QLFQETIEKDIAFGPVNLGEN-K---------------------------------QEAYKKVPELLKLVQLPEDYVKRS 147 (289)
T ss_pred hhhhhHHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHcCCChhHhcCC
Confidence 234569999998864322110 0 00112356678889995 445543
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++|+.++|+..++.+.||++
T Consensus 148 -----~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~-~~~tiiiisH~~~~~~~~~d~i 221 (289)
T PRK13645 148 -----PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKE-YKKRIIMVTHNMDQVLRIADEV 221 (289)
T ss_pred -----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCCEEEEEecCHHHHHHhCCEE
Confidence 4469999999999999999999999999999999999999999999987653 3455666888888999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000523 396 ILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1445)
++|++|++++.|+.+++.
T Consensus 222 ~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 222 IVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 348
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-34 Score=328.11 Aligned_cols=216 Identities=24% Similarity=0.299 Sum_probs=179.9
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|+++.+.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 4788999887631 11358999999999999999999999999999999999876 4589999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 926 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 926 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
.. ...++.++|++|++. +++..|+.+++.+..... ....+...+.++++++.+++.+..+.. ++.||+
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 43 234567999999974 677789999998864322 123344455678999999998777665 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|++. ++.. +|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~~-~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAME-ADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHhc-CCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999987 3554 999999985 79999
Q ss_pred EcCCC
Q 000523 1081 VGPLG 1085 (1445)
Q Consensus 1081 ~G~~~ 1085 (1445)
.|+..
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 99863
No 349
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.1e-34 Score=288.30 Aligned_cols=197 Identities=26% Similarity=0.388 Sum_probs=170.4
Q ss_pred CceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcc------c-ccceEEEeccCCC
Q 000523 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE------T-FARISGYCEQNDI 942 (1445)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~-~~~~~gyv~Q~d~ 942 (1445)
+...||++|++.|++||-+||+|||||||||||-+|+|... +.+|+|.+.|+++... . ..+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 45789999999999999999999999999999999999876 4589999999886431 2 2467999999999
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEE
Q 000523 943 HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1022 (1445)
Q Consensus 943 ~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illL 1022 (1445)
+.|++|..||+...+.++.....+ ......+.++.+||.+..+.. +..|||||+|||+||||++..|+|||.
T Consensus 99 Lip~ltAlENV~lPleL~ge~~~~---~~~~A~~lL~~vGLg~Rl~Hy-----P~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGESSAD---SRAGAKALLEAVGLGKRLTHY-----PAQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCcccc---HHHHHHHHHHHhCcccccccC-----ccccCchHHHHHHHHHHhcCCCCEEec
Confidence 999999999999998887643222 233456789999998876665 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEEE
Q 000523 1023 DEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1079 (1445)
Q Consensus 1023 DEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~ 1079 (1445)
||||-+||..+...|.+++-.+.+ .|.|.|++||||. +..-|||.+-|.. |+++
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~ 225 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLV 225 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceec
Confidence 999999999999999999988865 5999999999985 6778999999986 6765
No 350
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=330.43 Aligned_cols=218 Identities=22% Similarity=0.299 Sum_probs=179.4
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.++.... ...+.+|+|||++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~~-------~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i~ 75 (280)
T PRK13633 5 IKCKNVSYKYESNEE-------STEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDTS 75 (280)
T ss_pred EEEeeeEEEcCCCCC-------CCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecc
Confidence 678888887742100 012469999999999999999999999999999999999876 45899999998764
Q ss_pred c----ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 927 Q----ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 927 ~----~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
. ...++.+||++|++. .+...||.|++.|..... .....+.++.++++++.++|.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 147 (280)
T PRK13633 76 DEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLSG 147 (280)
T ss_pred ccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 3 234567999999974 233469999998875432 2233445567899999999988877763 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++. +. .+|++++|++ |++++
T Consensus 148 G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~-~~-~~d~v~~l~~-G~i~~ 224 (280)
T PRK13633 148 GQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEE-AV-EADRIIVMDS-GKVVM 224 (280)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHH-Hh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 9999999999873 54 4999999986 79999
Q ss_pred EcCC
Q 000523 1081 VGPL 1084 (1445)
Q Consensus 1081 ~G~~ 1084 (1445)
.|+.
T Consensus 225 ~g~~ 228 (280)
T PRK13633 225 EGTP 228 (280)
T ss_pred ecCH
Confidence 9985
No 351
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-34 Score=323.76 Aligned_cols=209 Identities=25% Similarity=0.348 Sum_probs=174.2
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 367888887763 2359999999999999999999999999999999999865 4589999999875
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCH
Q 000523 926 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 926 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSg 1001 (1445)
.. ...++.++|++|++.+++ .|++|++.+....+ . . ..+.++++++.+++. +..+.. +..|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~-~---~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G-E---KNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C-c---HHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 42 234567999999988776 69999998754322 1 1 123567889999996 455543 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 57788999999985 78998
Q ss_pred EcCC
Q 000523 1081 VGPL 1084 (1445)
Q Consensus 1081 ~G~~ 1084 (1445)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8875
No 352
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=4.2e-34 Score=316.39 Aligned_cols=189 Identities=23% Similarity=0.370 Sum_probs=161.6
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC---c----ccccceEEEeccCCCCC
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK---Q----ETFARISGYCEQNDIHS 944 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~Q~d~~~ 944 (1445)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999876 45899999998742 1 12356799999999988
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000523 945 PFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1024 (1445)
Q Consensus 945 ~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDE 1024 (1445)
+..|++||+.+....+ ........+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQK-----IYELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 8999999999865432 123334455688999999998777765 35799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEE
Q 000523 1025 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1072 (1445)
Q Consensus 1025 PTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l 1072 (1445)
||+|||+.++..+.+.|+++.++|.|||+++|++. +.+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999998777899999999985 34679998875
No 353
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-34 Score=331.67 Aligned_cols=219 Identities=21% Similarity=0.301 Sum_probs=176.8
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++|+++.++... .....+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 478899988764210 001259999999999999999999999999999999999876 4589999999875
Q ss_pred C--------cccccceEEEeccCCCC-CCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000523 926 K--------QETFARISGYCEQNDIH-SPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPG 995 (1445)
Q Consensus 926 ~--------~~~~~~~~gyv~Q~d~~-~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 995 (1445)
. ...+++.++|++|++.. ....|++||+.|..... ....+...+.++++++.++|. +..+..
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 3 12345679999999632 22469999998864322 123334445678899999994 555554
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEec
Q 000523 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 996 ~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
++.||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 457999999999999999999999999999999999999999999999876 4899999999986 57889999999985
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 799998875
No 354
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.5e-34 Score=366.91 Aligned_cols=207 Identities=24% Similarity=0.394 Sum_probs=165.2
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1445)
++|+|+|++++||+.++|+|+||||||||+|+|+|+++|+ +|+|.+||.++++... ++.++||+|++.++ +.|
T Consensus 349 ~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf-~~T 424 (588)
T PRK13657 349 QGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQ---SGRILIDGTDIRTVTRASLRRNIAVVFQDAGLF-NRS 424 (588)
T ss_pred ceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCEEhhhCCHHHHHhheEEEecCcccc-ccc
Confidence 3899999999999999999999999999999999999998 9999999999887654 46899999987555 579
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
++||+.++.. ....+.+.++++.. ..+..++ .+++..||.+|+.+ +
T Consensus 425 i~~Ni~~~~~----~~~d~~i~~al~~~---------------------------~l~~~i~--~lp~gldt~i~~~g-~ 470 (588)
T PRK13657 425 IEDNIRVGRP----DATDEEMRAAAERA---------------------------QAHDFIE--RKPDGYDTVVGERG-R 470 (588)
T ss_pred HHHHHhcCCC----CCCHHHHHHHHHHh---------------------------CHHHHHH--hCcccccchhcCCC-C
Confidence 9999987531 11111111111110 0111122 36777899999764 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1445)
.||||||||++|||+|+++|++++||||||+||+.++..+.+.|++.. .++|+|+ ++|+. +..+.+|+|++|++|+
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~--~~~tvIi-itHr~-~~~~~~D~ii~l~~G~ 546 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELM--KGRTTFI-IAHRL-STVRNADRILVFDNGR 546 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--cCCEEEE-EEecH-HHHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999998753 3455555 55544 5567899999999999
Q ss_pred EEEecChhHHHH
Q 000523 403 IVYQGPRELVLE 414 (1445)
Q Consensus 403 iv~~G~~~~~~~ 414 (1445)
++..|+++++.+
T Consensus 547 i~~~g~~~~l~~ 558 (588)
T PRK13657 547 VVESGSFDELVA 558 (588)
T ss_pred EEEeCCHHHHHH
Confidence 999999998864
No 355
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-34 Score=317.73 Aligned_cols=195 Identities=24% Similarity=0.373 Sum_probs=162.9
Q ss_pred cceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 000523 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 248 (1445)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1445)
|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999998 9999999998765432 357999999988888999999998
Q ss_pred HhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhh
Q 000523 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1445)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1445)
++..... ... .+.+..++++++.+||++..++.+ ..|||||
T Consensus 93 ~~~~~~~-~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGL-KLT---------------------------------AEDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred ccccccc-Ccc---------------------------------HHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 7542110 000 001123567888999987666554 4699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEec
Q 000523 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1445)
Q Consensus 329 rqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1445)
|||++||++|+.+|++++|||||+|||..++..+.+.|+++.. ..+.+|+.++|+..++.+++|++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHA-ETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999999999998754 33455666888889999999999999999998764
No 356
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=6.2e-34 Score=318.91 Aligned_cols=196 Identities=26% Similarity=0.354 Sum_probs=166.1
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRE 245 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1445)
++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++.+||+|
T Consensus 14 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 14 TAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 4999999999999999999999999999999999999998 999999998775422 357999999988888899999
Q ss_pred HHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCC
Q 000523 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1445)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1445)
|+.+.....+.. ...+..+++.+||++..|..+ ..||
T Consensus 90 ~~~~~~~~~~~~--------------------------------------~~~~~~~l~~~~l~~~~~~~~-----~~LS 126 (223)
T TIGR03740 90 NLKVHTTLLGLP--------------------------------------DSRIDEVLNIVDLTNTGKKKA-----KQFS 126 (223)
T ss_pred HHHHHHHHcCCC--------------------------------------HHHHHHHHHHcCCcHHHhhhH-----hhCC
Confidence 998765322100 012456778899987666544 4699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEE
Q 000523 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1445)
Q Consensus 326 GGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1445)
||||||++||++++.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.+.+|++++|++|++++
T Consensus 127 ~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~ 204 (223)
T TIGR03740 127 LGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-Q-GITVILSSHILSEVQQLADHIGIISEGVLGY 204 (223)
T ss_pred HHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEcCCHHHHHHhcCEEEEEeCCEEEE
Confidence 9999999999999999999999999999999999999999998753 3 4455557788888999999999999999999
Q ss_pred ecChh
Q 000523 406 QGPRE 410 (1445)
Q Consensus 406 ~G~~~ 410 (1445)
.|+..
T Consensus 205 ~~~~~ 209 (223)
T TIGR03740 205 QGKIN 209 (223)
T ss_pred ecChh
Confidence 99865
No 357
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-34 Score=328.25 Aligned_cols=209 Identities=24% Similarity=0.369 Sum_probs=170.3
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1445)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|+..+++.+|
T Consensus 25 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 101 (265)
T PRK10575 25 TLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGMT 101 (265)
T ss_pred EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCcc
Confidence 4999999999999999999999999999999999999998 9999999988754322 357999999888889999
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
|.||+.++.... .... .. + . ......++.+++.+||++..++.++
T Consensus 102 v~e~l~~~~~~~-~~~~--------------~~-~-~-------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 146 (265)
T PRK10575 102 VRELVAIGRYPW-HGAL--------------GR-F-G-------------AADREKVEEAISLVGLKPLAHRLVD----- 146 (265)
T ss_pred HHHHHHhCcccc-cccc--------------cC-C-C-------------HHHHHHHHHHHHHcCCHHHhcCCcc-----
Confidence 999998753110 0000 00 0 0 0012235678889999876665554
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1445)
.|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++.... +++|+.++|+..++.+.+|+|++|++|+
T Consensus 147 ~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~-~~tiii~sH~~~~i~~~~d~i~~l~~G~ 225 (265)
T PRK10575 147 SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQER-GLTVIAVLHDINMAARYCDYLVALRGGE 225 (265)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 599999999999999999999999999999999999999999999876432 4556667888889999999999999999
Q ss_pred EEEecChhHHH
Q 000523 403 IVYQGPRELVL 413 (1445)
Q Consensus 403 iv~~G~~~~~~ 413 (1445)
+++.|+.+++.
T Consensus 226 i~~~~~~~~~~ 236 (265)
T PRK10575 226 MIAQGTPAELM 236 (265)
T ss_pred EEEecCHHHhc
Confidence 99999887653
No 358
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.9e-34 Score=365.73 Aligned_cols=256 Identities=21% Similarity=0.292 Sum_probs=192.7
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.++.+...+|+.++++.+++. .+ +....+....+++++|+++.++.
T Consensus 280 ~~~~~~a~~ri~~ll~~~~~~-----~~--~~~~~~~~~~~I~~~~v~~~y~~--------------------------- 325 (569)
T PRK10789 280 VERGSAAYSRIRAMLAEAPVV-----KD--GSEPVPEGRGELDVNIRQFTYPQ--------------------------- 325 (569)
T ss_pred HHHHHHHHHHHHHHHcCCCcc-----cC--CCCCCCCCCCcEEEEEEEEECCC---------------------------
Confidence 556777888888877665431 00 00011112346999999998732
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1445)
.+..+|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 326 -----~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~ 397 (569)
T PRK10789 326 -----TDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVS---EGDIRFHDIPLTKLQLDSWRSRLAVVSQT 397 (569)
T ss_pred -----CCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCC---CCEEEECCEEHhhCCHHHHHhheEEEccC
Confidence 1124899999999999999999999999999999999999998 9999999999876543 4679999998
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
+.++. .|++||+.++.. ....+.+.++++. .+. +. ....|+++.||
T Consensus 398 ~~lf~-~ti~~Ni~~~~~----~~~~~~~~~~~~~---~~l------------------------~~--~i~~lp~gl~t 443 (569)
T PRK10789 398 PFLFS-DTVANNIALGRP----DATQQEIEHVARL---ASV------------------------HD--DILRLPQGYDT 443 (569)
T ss_pred Ceecc-ccHHHHHhcCCC----CCCHHHHHHHHHH---cCC------------------------HH--HHHhCcCcccc
Confidence 76665 699999987531 1111111111110 000 00 12356788899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.+|+.+ ..||||||||++|||+++++|++++|||||++||+.++..+.+.|+++. .++|+|+ ++|+. +..+.+|+
T Consensus 444 ~~~~~g-~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tii~-itH~~-~~~~~~d~ 518 (569)
T PRK10789 444 EVGERG-VMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWG--EGRTVII-SAHRL-SALTEASE 518 (569)
T ss_pred eecCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-hHHHcCCE
Confidence 999864 4699999999999999999999999999999999999999999998853 4556555 44444 45577999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|+++.+|+++++.+
T Consensus 519 i~~l~~G~i~~~g~~~~l~~ 538 (569)
T PRK10789 519 ILVMQHGHIAQRGNHDQLAQ 538 (569)
T ss_pred EEEEeCCEEEEecCHHHHHH
Confidence 99999999999999998864
No 359
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-34 Score=326.71 Aligned_cols=219 Identities=21% Similarity=0.256 Sum_probs=175.4
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC---CeEEEEEEEc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 921 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 921 (1445)
..+.++|+++.++ .+.+|+|+|++|++||+++|+|||||||||||++|+|..+. .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3588999988763 24699999999999999999999999999999999997542 1368999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000523 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 996 (1445)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1445)
|.++.. ...++.++|++|++.+++ .||+||+.+.+..+. ... ..++.++++++.+++....+..... .+
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~~-~~ 152 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKLNE-SG 152 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhhCC-Cc
Confidence 987531 234567999999988887 499999988764332 111 2234567788888874311111111 14
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec--
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR-- 1074 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~-- 1074 (1445)
..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++++ ++|||+++|++. ++.+.+|++++|++
T Consensus 153 ~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~~~ 230 (269)
T PRK14259 153 YSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFFNAEE 230 (269)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEeccc
Confidence 67999999999999999999999999999999999999999999999854 789999999986 58889999999985
Q ss_pred --------CcEEEEEcCC
Q 000523 1075 --------GGQEIYVGPL 1084 (1445)
Q Consensus 1075 --------gG~~~y~G~~ 1084 (1445)
+|++++.|+.
T Consensus 231 ~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 231 VEGGSGGKVGYLVEFNET 248 (269)
T ss_pred cccccccccceEEEeCCH
Confidence 3678999886
No 360
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-34 Score=324.29 Aligned_cols=212 Identities=21% Similarity=0.303 Sum_probs=167.6
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEEcCccCC--CcC---ccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMD--EFV---PQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~--~~~---~~~~~~yv~Q~d~~~ 238 (1445)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++. ... .++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 4899999999999999999999999999999999999862 012899999999875 221 235799999998889
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+.+||.||+.++....+..... ++....++++++.+||....... -+
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~-~~ 144 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKSK--------------------------------KELDERVEWALKKAALWDEVKDR-LN 144 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCCH--------------------------------HHHHHHHHHHHHHcCCccchhhh-hc
Confidence 9999999998865322110000 00112345677788874321111 12
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
+.++.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++...+|+|++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 221 (253)
T PRK14267 145 DYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAFL 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998743 3 45666788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|++++.|+.+++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 222 YLGKLIEVGPTRKVF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 361
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-34 Score=327.00 Aligned_cols=209 Identities=23% Similarity=0.377 Sum_probs=170.9
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++..++.+|
T Consensus 21 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~t 97 (265)
T PRK10253 21 TVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDIT 97 (265)
T ss_pred EEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCCc
Confidence 4999999999999999999999999999999999999998 9999999998755332 356999999988888999
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
|+||+.++..-.. +. . ... .+.....++++++.+||++..++. ++
T Consensus 98 v~~~~~~~~~~~~-~~----~-------------~~~------------~~~~~~~~~~~l~~~~l~~~~~~~-----~~ 142 (265)
T PRK10253 98 VQELVARGRYPHQ-PL----F-------------TRW------------RKEDEEAVTKAMQATGITHLADQS-----VD 142 (265)
T ss_pred HHHHHHhCccccc-cc----c-------------cCC------------CHHHHHHHHHHHHHcCCHHHhcCC-----cc
Confidence 9999987521000 00 0 000 000112356788899998665554 45
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1445)
.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.. ..+++|+.++|+..++.+++|++++|++|+
T Consensus 143 ~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~-~~~~tiii~tH~~~~~~~~~d~i~~l~~G~ 221 (265)
T PRK10253 143 TLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNR-EKGYTLAAVLHDLNQACRYASHLIALREGK 221 (265)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998764 334556667888889999999999999999
Q ss_pred EEEecChhHHH
Q 000523 403 IVYQGPRELVL 413 (1445)
Q Consensus 403 iv~~G~~~~~~ 413 (1445)
+++.|+.+++.
T Consensus 222 i~~~g~~~~~~ 232 (265)
T PRK10253 222 IVAQGAPKEIV 232 (265)
T ss_pred EEEeCCHHHHh
Confidence 99999988764
No 362
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-34 Score=320.96 Aligned_cols=202 Identities=23% Similarity=0.408 Sum_probs=168.4
Q ss_pred cceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 000523 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRETLA 248 (1445)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1445)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999998 9999999998765432 357999999988899999999998
Q ss_pred HhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhh
Q 000523 249 FSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQ 328 (1445)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1445)
++... ..... ......++++++.+||++..++.+. .|||||
T Consensus 94 ~~~~~-~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLKLN---------------------------------AAQREKLHAIARQMGIEDLLARLPG-----QLSGGQ 134 (232)
T ss_pred ccccc-ccCCC---------------------------------HHHHHHHHHHHHHcCcHHHHhCCcc-----cCCHHH
Confidence 75321 00000 0012245678899999876666554 699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecC
Q 000523 329 KKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1445)
Q Consensus 329 rqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~ 408 (1445)
|||++||++++.+|++++|||||+|||..++..+.+.|+++.+.. +++++.++|+..++.+.+|++++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQER-QLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999876533 4455557888889999999999999999999999
Q ss_pred hhHHHH
Q 000523 409 RELVLE 414 (1445)
Q Consensus 409 ~~~~~~ 414 (1445)
.+++.+
T Consensus 214 ~~~~~~ 219 (232)
T PRK10771 214 TDELLS 219 (232)
T ss_pred HHHHHh
Confidence 887643
No 363
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-34 Score=329.73 Aligned_cols=217 Identities=24% Similarity=0.283 Sum_probs=179.9
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCe-EEEEEEEcCcc
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY-ITGNITISGYP 924 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~-~~G~i~i~g~~ 924 (1445)
.++++|+++.++. ..+.+|+|||++|++||++||+||||||||||+++|+|..++.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4778888887631 12359999999999999999999999999999999999865321 13899999988
Q ss_pred CCc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000523 925 KKQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1000 (1445)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1445)
... ...++.+||++|++. .++..||.|++.|....+ ....++.++.++++++.++|.+..+.. ++.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSE-----PANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCC
Confidence 653 234567999999974 567789999998764322 233445556788999999998877765 46799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEE
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1079 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~ 1079 (1445)
||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++. + +.+|++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 8999999999863 4 57999999985 7999
Q ss_pred EEcCC
Q 000523 1080 YVGPL 1084 (1445)
Q Consensus 1080 y~G~~ 1084 (1445)
+.|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99985
No 364
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-34 Score=321.63 Aligned_cols=211 Identities=21% Similarity=0.289 Sum_probs=175.4
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.++. + ..|||+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 467788877631 1 138999999999999999999999999999999875 45899999998754
Q ss_pred cc-cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000523 927 QE-TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1005 (1445)
Q Consensus 927 ~~-~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1445)
.. ..++.++|++|++.+++.+|+.||+.+..... ... .+..++.++++++.+++.+..+..+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 32 12456999999999999999999998753211 111 1233456889999999988777764 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1006 Rl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
|++||++|+.+|++++|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998764 899999999986 57788999999985 799999885
No 365
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=323.33 Aligned_cols=219 Identities=26% Similarity=0.293 Sum_probs=174.7
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCC--CC-eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 922 (1445)
-+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 377888887763 2369999999999999999999999999999999999632 21 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.+... ..+++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.+........ .+.
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 147 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLHD-SAL 147 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHhc-Ccc
Confidence 87632 134567999999988777 899999988654321 112233345677889998875321111111 246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 148 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14239 148 GLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFLD-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 689999999986 57888999999985 78
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
+++.|+.
T Consensus 225 i~~~g~~ 231 (252)
T PRK14239 225 LIEYNDT 231 (252)
T ss_pred EEEeCCH
Confidence 9999885
No 366
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-34 Score=320.22 Aligned_cols=204 Identities=27% Similarity=0.425 Sum_probs=171.0
Q ss_pred eeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHHH
Q 000523 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVRE 245 (1445)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 245 (1445)
+|+|+|++++|||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|++|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999998 9999999998765332 467999999988898999999
Q ss_pred HHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCC
Q 000523 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1445)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1445)
|+.++....+... .+....+.++++.+||.+..++.+ +.||
T Consensus 91 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVDK----------------------------------KEIERKVLEIAEMLGIDHLLNRKP-----ETLS 131 (235)
T ss_pred HHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 9987643221100 001123456788899987666554 4699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEE
Q 000523 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1445)
Q Consensus 326 GGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1445)
|||||||+||++++.+|++++|||||+|||..++.++.+.|+++....+ ++++.++|+.+++.+.+|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~-~tili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFG-VTVLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998765334 455557778888999999999999999999
Q ss_pred ecChhHHH
Q 000523 406 QGPRELVL 413 (1445)
Q Consensus 406 ~G~~~~~~ 413 (1445)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987764
No 367
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=8.7e-34 Score=320.45 Aligned_cols=205 Identities=27% Similarity=0.410 Sum_probs=170.8
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-cceEEEEcCCCCCCCCCCHH
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-QRTAAYISQHDNHIGEMTVR 244 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 244 (1445)
++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|++
T Consensus 14 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 14 QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 4999999999999999999999999999999999999998 9999999998765433 36799999998888889999
Q ss_pred HHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccC
Q 000523 245 ETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGI 324 (1445)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1445)
||+.+..+..+... ......++++++.+++....++.+ +.|
T Consensus 91 enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~l 131 (237)
T TIGR00968 91 DNIAFGLEIRKHPK----------------------------------AKIKARVEELLELVQLEGLGDRYP-----NQL 131 (237)
T ss_pred HHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCh-----hhC
Confidence 99987654321100 001123466788899976666544 469
Q ss_pred ChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEE
Q 000523 325 SGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1445)
Q Consensus 325 SGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv 404 (1445)
|||||||++||++|+.+|++++|||||+|||..++..+.+.|++... ..+.+|+.++|...++.+.+|++++|++|+++
T Consensus 132 S~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~-~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~ 210 (237)
T TIGR00968 132 SGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHD-EVHVTTVFVTHDQEEAMEVADRIVVMSNGKIE 210 (237)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998754 32445555777778889999999999999999
Q ss_pred EecChhHHH
Q 000523 405 YQGPRELVL 413 (1445)
Q Consensus 405 ~~G~~~~~~ 413 (1445)
+.|+.+++.
T Consensus 211 ~~~~~~~~~ 219 (237)
T TIGR00968 211 QIGSPDEVY 219 (237)
T ss_pred EecCHHHHH
Confidence 999988764
No 368
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-34 Score=319.65 Aligned_cols=199 Identities=27% Similarity=0.391 Sum_probs=171.3
Q ss_pred EeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcc-cccceEEEeccCCCCCCCCCHHHH
Q 000523 874 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQE-TFARISGYCEQNDIHSPFVTIYES 952 (1445)
Q Consensus 874 iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~Q~d~~~~~lTv~E~ 952 (1445)
+|+|+|++|+|||+++|+|+||||||||+++|+|..+ +..|+|.++|.+.... ..++.++|++|++.+++.+|+.|+
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999866 4589999999876532 234579999999999999999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000523 953 LLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1032 (1445)
Q Consensus 953 l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~ 1032 (1445)
+.+..... .......++.+.++++.++|.+..++.+ ..||||||||++||++|+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1223344456788999999988777663 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1033 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1033 ~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
++..+.+.|++++.+ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998764 899999999986 47788999999985 799999875
No 369
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.9e-34 Score=317.86 Aligned_cols=194 Identities=31% Similarity=0.459 Sum_probs=160.0
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCC-CCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN-HIGE 240 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1445)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 35999999999999999999999999999999999999998 9999999988754322 357999999864 4678
Q ss_pred CCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccc
Q 000523 241 MTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEM 320 (1445)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1445)
+||+||+.++....+... .+....++++++.+||++..+..+
T Consensus 91 ~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 132 (211)
T cd03225 91 PTVEEEVAFGLENLGLPE----------------------------------EEIEERVEEALELVGLEGLRDRSP---- 132 (211)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 999999987643221000 001123566788999986666544
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000523 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1445)
Q Consensus 321 ~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1445)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++..+||+|++|++
T Consensus 133 -~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 133 -FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA-E-GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998764 3 45566688888899999999999999
Q ss_pred Ce
Q 000523 401 GQ 402 (1445)
Q Consensus 401 G~ 402 (1445)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 370
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=322.61 Aligned_cols=215 Identities=21% Similarity=0.237 Sum_probs=175.9
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1445)
-+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 367888887663 246999999999999999999999999999999999975421 2579999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 993 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1445)
.++.. ...++.++|++|++.+++ .|++||+.|....... ......++.++++++.+++.+ ..+..
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLKKS--- 144 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87632 123567999999988887 8999999886543211 122334456788999998753 22322
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
...||+|||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 145 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~ 220 (251)
T PRK14270 145 --ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFL 220 (251)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEE
Confidence 467999999999999999999999999999999999999999999999876 689999999986 5788899999998
Q ss_pred cCcEEEEEcCC
Q 000523 1074 RGGQEIYVGPL 1084 (1445)
Q Consensus 1074 ~gG~~~y~G~~ 1084 (1445)
+ |++++.|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14270 221 M-GDLIEFNKT 230 (251)
T ss_pred C-CeEEEeCCH
Confidence 5 799999885
No 371
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-34 Score=334.57 Aligned_cols=217 Identities=18% Similarity=0.188 Sum_probs=171.3
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC-CceeEEEEcCccCCCcCc-------cceEEEEcCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL-KVSGTVTYNGHDMDEFVP-------QRTAAYISQHDN 236 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~-~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1445)
..+|+|||++|++||+++|+|+||||||||+++|+|++++.. ..+|+|.++|+++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 459999999999999999999999999999999999987411 128999999998765432 246999999875
Q ss_pred --CCCCCCHHHHHHHhHHhcCC-CchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccc
Q 000523 237 --HIGEMTVRETLAFSARCQGV-GTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1445)
Q Consensus 237 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1445)
+.+.+||.+++.+....... +... ++ ..+....+.++|+.+||++..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~~-------------~~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW----------------QR-------------FGWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc----------------cc-------------HHHHHHHHHHHHHHCCCCChHH
Confidence 67889999999764221000 0000 00 0011234677899999975321
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcC
Q 000523 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1445)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1445)
+.++.+..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++.. ..+.+++.++|+...+.+++|
T Consensus 151 --~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~-~~g~tii~itHdl~~v~~~~d 227 (330)
T PRK15093 151 --AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQ-NNNTTILLISHDLQMLSQWAD 227 (330)
T ss_pred --HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-hcCCEEEEEECCHHHHHHhCC
Confidence 12344567999999999999999999999999999999999999999999999764 335667778999999999999
Q ss_pred eEEEecCCeEEEecChhHHH
Q 000523 394 DIILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~ 413 (1445)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999998774
No 372
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=324.06 Aligned_cols=219 Identities=19% Similarity=0.247 Sum_probs=176.0
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC--C-eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 922 (1445)
-+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478889887763 24699999999999999999999999999999999997642 1 1479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.+... ...++.+||++|++.+++. ||+||+.+....+. ....++.++.++++++.+++.+........ .+.
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~~-~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLHT-QAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhhC-Ccc
Confidence 87632 2345679999999888875 99999988654321 112233445577889999885421111111 246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.||||||||++||++|+.+|++++|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 231 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM-GE 231 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 799999999986 57888999999985 89
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
++..|+.
T Consensus 232 i~~~g~~ 238 (259)
T PRK14274 232 LVECNDT 238 (259)
T ss_pred EEEECCH
Confidence 9999885
No 373
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=322.96 Aligned_cols=218 Identities=18% Similarity=0.243 Sum_probs=173.8
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC--C-eEEEEEEEcCcc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISGYP 924 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g~~ 924 (1445)
+++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|.... . +.+|+|.++|.+
T Consensus 7 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~ 73 (251)
T PRK14244 7 SVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGID 73 (251)
T ss_pred EeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEe
Confidence 4667766652 24699999999999999999999999999999999997541 1 358999999987
Q ss_pred CCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000523 925 KKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGL 999 (1445)
Q Consensus 925 ~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~L 999 (1445)
+.. ...++.++|++|++.+++. |+.||+.+....+.. .......++.++++++.+++.+........ .+..|
T Consensus 74 i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~L 150 (251)
T PRK14244 74 VYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHGL-AKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFEL 150 (251)
T ss_pred hHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHHHcCCCchhhhHhhc-ChhhC
Confidence 532 1245679999999888775 999999886433311 112233445678899999986522111111 14679
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEE
Q 000523 1000 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1079 (1445)
Q Consensus 1000 SgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~ 1079 (1445)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |+++
T Consensus 151 S~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~ 227 (251)
T PRK14244 151 SGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIV 227 (251)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEE
Confidence 9999999999999999999999999999999999999999999985 4899999999986 57788999999986 7999
Q ss_pred EEcCC
Q 000523 1080 YVGPL 1084 (1445)
Q Consensus 1080 y~G~~ 1084 (1445)
+.|+.
T Consensus 228 ~~~~~ 232 (251)
T PRK14244 228 EYNTT 232 (251)
T ss_pred EeCCH
Confidence 98875
No 374
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=4.4e-33 Score=315.91 Aligned_cols=173 Identities=24% Similarity=0.296 Sum_probs=136.3
Q ss_pred eecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHHHHH
Q 000523 875 LNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYESLL 954 (1445)
Q Consensus 875 L~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~ 954 (1445)
|.==.+.|..||+++++||||-||||+.++|+|..+ +.+|+ .. .-.++|=||--.-....||++-|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ik--Pdeg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIK--PDEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhcccc--CCCCC----Cc-------cceEeecceeecCCCCCcHHHHHH
Confidence 444457888999999999999999999999999776 34554 11 123678888655556789999775
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000523 955 FSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1034 (1445)
Q Consensus 955 f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~ 1034 (1445)
-...-+... .-...++++-|+|.++.+..+ .+|||||.|||+||.+|.+++++.+||||++.||.+.+
T Consensus 424 ~~~~~~~~~-------s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFGS-------SYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhccc-------chhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 433221111 112357888899999888874 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 1035 AIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 1035 ~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
..+-++||+... +++|.+++-||... +--..||+++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 999999999875 47899999999753 445678888775
No 375
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=2e-34 Score=367.60 Aligned_cols=257 Identities=22% Similarity=0.364 Sum_probs=194.2
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.++.+...+|+.+.++.+++. .. +....+.....++++||++.++.
T Consensus 297 ~~~~~~~~~ri~~~l~~~~~~-----~~--~~~~~~~~~~~i~~~~v~f~y~~--------------------------- 342 (571)
T TIGR02203 297 MQRGLAAAESLFTLLDSPPEK-----DT--GTRAIERARGDVEFRNVTFRYPG--------------------------- 342 (571)
T ss_pred HHHHHHHHHHHHHHHcCCCCC-----CC--CCCCCCCCCCeEEEEEEEEEcCC---------------------------
Confidence 567788888888887665441 00 00011112346999999999742
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1445)
. ..++|+|+|+++++||.++|+|+||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 343 --~---~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~ 414 (571)
T TIGR02203 343 --R---DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPD---SGQILLDGHDLADYTLASLRRQVALVSQD 414 (571)
T ss_pred --C---CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCeEEECCEeHHhcCHHHHHhhceEEccC
Confidence 1 124899999999999999999999999999999999999998 9999999999876653 4679999997
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
+ ++++.|++|||.++..- ....+.+.++++.. + .++.+ -.|++..||
T Consensus 415 ~-~lf~~Ti~~Ni~~~~~~---~~~~~~i~~~l~~~---~------------------------l~~~i--~~lp~gldt 461 (571)
T TIGR02203 415 V-VLFNDTIANNIAYGRTE---QADRAEIERALAAA---Y------------------------AQDFV--DKLPLGLDT 461 (571)
T ss_pred c-ccccccHHHHHhcCCCC---CCCHHHHHHHHHHc---C------------------------hHHHH--HhCcCcccc
Confidence 7 45567999999876310 01111122111110 0 11112 236677899
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.+|+.+ +.||||||||++|||+++++|++++||||||+||..++..+.+.|++.. .++|+|+ ++|+. +..+.||+
T Consensus 462 ~i~~~g-~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~--~~~tiIi-itH~~-~~~~~~D~ 536 (571)
T TIGR02203 462 PIGENG-VLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM--QGRTTLV-IAHRL-STIEKADR 536 (571)
T ss_pred eecCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh--CCCEEEE-Eehhh-HHHHhCCE
Confidence 999875 4699999999999999999999999999999999999999999998753 3455555 44443 66788999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|+++..|+++++.+
T Consensus 537 ii~l~~g~i~~~g~~~~l~~ 556 (571)
T TIGR02203 537 IVVMDDGRIVERGTHNELLA 556 (571)
T ss_pred EEEEeCCEEEeeCCHHHHHH
Confidence 99999999999999998864
No 376
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.2e-34 Score=396.11 Aligned_cols=257 Identities=19% Similarity=0.230 Sum_probs=197.0
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHh-hcCCC-CC-cceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRID-RVGID-LP-KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNY 154 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~-~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 154 (1445)
.+....++||+.++.+.++|. ....+ ....+ -| ..+|+|+||++.|..
T Consensus 1199 ~e~~~~sveRi~e~~~~~~E~-----~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~------------------------ 1249 (1622)
T PLN03130 1199 AENSLNAVERVGTYIDLPSEA-----PLVIENNRPPPGWPSSGSIKFEDVVLRYRP------------------------ 1249 (1622)
T ss_pred HHHHHHHHHHHHHHhCCCCcc-----cccccCCCCCCCCCCCCcEEEEEEEEEeCC------------------------
Confidence 367788899999988766551 00000 00011 12 357999999999842
Q ss_pred hhhcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEE
Q 000523 155 LRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYI 231 (1445)
Q Consensus 155 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv 231 (1445)
...++|+|+|++|+|||.+||+|++|||||||+++|.|.++|+ +|+|.+||.++++... ++.++||
T Consensus 1250 --------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p~---~G~I~IDG~dI~~i~l~~LR~~IsiV 1318 (1622)
T PLN03130 1250 --------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVELE---RGRILIDGCDISKFGLMDLRKVLGII 1318 (1622)
T ss_pred --------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCEecccCCHHHHHhccEEE
Confidence 1124999999999999999999999999999999999999998 9999999999987754 5789999
Q ss_pred cCCCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccc
Q 000523 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1445)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1445)
||++.+|. .||||||.++.. ...+.+.+++++. +. +.. +-.|+.+
T Consensus 1319 pQdp~LF~-GTIreNLd~~~~-----~tdeei~~Al~~a---~l------------------------~~~--I~~lp~G 1363 (1622)
T PLN03130 1319 PQAPVLFS-GTVRFNLDPFNE-----HNDADLWESLERA---HL------------------------KDV--IRRNSLG 1363 (1622)
T ss_pred CCCCcccc-ccHHHHhCcCCC-----CCHHHHHHHHHHc---Cc------------------------HHH--HHhCccc
Confidence 99876665 699999986421 1122222222221 10 111 2246778
Q ss_pred ccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhh
Q 000523 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1445)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1445)
.||.||+.+. +||||||||++|||||+++|+||+||||||+||+.|...|.+.|++.. . +.+++++.|.. ++...
T Consensus 1364 Ldt~Vge~G~-nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~--~-~~TvI~IAHRL-~tI~~ 1438 (1622)
T PLN03130 1364 LDAEVSEAGE-NFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF--K-SCTMLIIAHRL-NTIID 1438 (1622)
T ss_pred cCccccCCCC-CCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC--C-CCEEEEEeCCh-HHHHh
Confidence 8999998655 699999999999999999999999999999999999999999999753 3 34555566655 45556
Q ss_pred cCeEEEecCCeEEEecChhHHHH
Q 000523 392 FDDIILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~ 414 (1445)
||+|++|++|+|+++|+++++++
T Consensus 1439 ~DrIlVLd~G~IvE~Gt~~eLl~ 1461 (1622)
T PLN03130 1439 CDRILVLDAGRVVEFDTPENLLS 1461 (1622)
T ss_pred CCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999875
No 377
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=333.26 Aligned_cols=225 Identities=16% Similarity=0.198 Sum_probs=178.0
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC--CeEEEEEEEcCcc
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--GYITGNITISGYP 924 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~~~~G~i~i~g~~ 924 (1445)
+.++|++..+... .+...+|+|||++|++||++||+|+||||||||+++|+|.... .+.+|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 6788888776421 1235699999999999999999999999999999999997642 2468999999987
Q ss_pred CCc---cc----ccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCC---CCHHHHHHHHHHHHHHcCCccccccccc
Q 000523 925 KKQ---ET----FARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPE---VDSETRKMFIDEVMELVELNPLRQSLVG 992 (1445)
Q Consensus 925 ~~~---~~----~~~~~gyv~Q~d~--~~~~lTv~E~l~f~~~lr~~~~---~~~~~~~~~v~~~l~~l~L~~~~~~~vg 992 (1445)
+.. .. .++.++||+|++. +.|.+||.+++........... ....+.++.+.++++.++|.+..+..
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~-- 152 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAM-- 152 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHH--
Confidence 642 11 1246999999975 5788999999976422111000 11123455688999999997532211
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeE
Q 000523 993 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFL 1071 (1445)
Q Consensus 993 ~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~ 1071 (1445)
...+..|||||||||+||+||+.+|+||+|||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|++++
T Consensus 153 ~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dri~v 231 (330)
T PRK15093 153 RSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADKINV 231 (330)
T ss_pred hCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEE
Confidence 1114689999999999999999999999999999999999999999999999864 899999999986 57788999999
Q ss_pred EecCcEEEEEcCC
Q 000523 1072 MKRGGQEIYVGPL 1084 (1445)
Q Consensus 1072 l~~gG~~~y~G~~ 1084 (1445)
|++ |+++..|+.
T Consensus 232 m~~-G~ive~g~~ 243 (330)
T PRK15093 232 LYC-GQTVETAPS 243 (330)
T ss_pred EEC-CEEEEECCH
Confidence 985 899999985
No 378
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=8.5e-34 Score=310.29 Aligned_cols=190 Identities=49% Similarity=0.849 Sum_probs=162.1
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCC--CCCeEEEEEEEcCc
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRK--TGGYITGNITISGY 923 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~--~~~~~~G~i~i~g~ 923 (1445)
.+.++|+++.++.... ...+.+|+|+|+++++||+++|+||||||||||+++|+|.. . +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~~-------~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSPS-------KSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCCC-------cccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 4778888887742100 01246999999999999999999999999999999999986 5 56899999998
Q ss_pred cCCcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000523 924 PKKQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQ 1003 (1445)
Q Consensus 924 ~~~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGq 1003 (1445)
+......++.++|++|++.+++.+|++|++.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8754445677999999998888999999997642110 499999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1004 rqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
|||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999998777999999999986567788999999986 7887764
No 379
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.07 Aligned_cols=219 Identities=21% Similarity=0.283 Sum_probs=175.0
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1445)
.+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+.. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367888887763 235999999999999999999999999999999999965321 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.++++++.+++.+........ .+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 145 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGI--KDKKKLDEIVEKSLKGAALWDEVKDRLKK-SAL 145 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CCHHHHHHHHHHHHHHcCCchhhHHHHhc-CCC
Confidence 87642 234567999999988777 8999999986543311 12233455678888888875311111111 146
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|++. ++.+.+|++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14240 146 GLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFLN-GE 222 (250)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 4799999999986 57788999999986 78
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
++..|+.
T Consensus 223 i~~~~~~ 229 (250)
T PRK14240 223 IVEFGDT 229 (250)
T ss_pred EEEeCCH
Confidence 9998874
No 380
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=322.10 Aligned_cols=218 Identities=23% Similarity=0.319 Sum_probs=175.5
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEcCc
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 923 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 923 (1445)
++++|+++.+. ++.+|+|+|++|++||+++|+|+|||||||||++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67888887663 236999999999999999999999999999999999975421 25899999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000523 924 PKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 998 (1445)
Q Consensus 924 ~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1445)
+... ...++.++|++|++.+++ .|++||+.+...... ....+..++.++++++.+++.+..+.... ..+.+
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~ 146 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSELN-KPGTR 146 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHHh-CChhh
Confidence 7542 134567999999988887 899999988654321 11223344557888999988642111111 12468
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEE
Q 000523 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1078 (1445)
Q Consensus 999 LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~ 1078 (1445)
||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |++
T Consensus 147 LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i 223 (250)
T PRK14262 147 LSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GEL 223 (250)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 789999999986 57888999999986 789
Q ss_pred EEEcCC
Q 000523 1079 IYVGPL 1084 (1445)
Q Consensus 1079 ~y~G~~ 1084 (1445)
+..|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14262 224 IEYGPT 229 (250)
T ss_pred EEecCH
Confidence 998875
No 381
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-34 Score=325.37 Aligned_cols=208 Identities=26% Similarity=0.392 Sum_probs=169.7
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|+..+++.+|
T Consensus 16 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 92 (255)
T PRK11231 16 RILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGIT 92 (255)
T ss_pred EEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCcc
Confidence 4999999999999999999999999999999999999998 9999999988654322 356999999988888899
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
|.||+.++..-.. .. .... ..+....++++++.+||++..++.+ +
T Consensus 93 v~~~i~~~~~~~~--~~----------------~~~~------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 137 (255)
T PRK11231 93 VRELVAYGRSPWL--SL----------------WGRL------------SAEDNARVNQAMEQTRINHLADRRL-----T 137 (255)
T ss_pred HHHHHHhccchhh--hh----------------ccCC------------CHHHHHHHHHHHHHcCCHHHHcCCc-----c
Confidence 9999987531000 00 0000 0001223567788999987666554 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1445)
.|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+.+|++++|++|+
T Consensus 138 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~-~~tiii~tH~~~~~~~~~d~i~~l~~G~ 215 (255)
T PRK11231 138 DLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-Q-GKTVVTVLHDLNQASRYCDHLVVLANGH 215 (255)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEECCHHHHHHhcCEEEEEECCe
Confidence 6999999999999999999999999999999999999999999998754 3 4556667888889999999999999999
Q ss_pred EEEecChhHHH
Q 000523 403 IVYQGPRELVL 413 (1445)
Q Consensus 403 iv~~G~~~~~~ 413 (1445)
+++.|+.+++.
T Consensus 216 i~~~~~~~~~~ 226 (255)
T PRK11231 216 VMAQGTPEEVM 226 (255)
T ss_pred EEEEcCHHHhc
Confidence 99999987763
No 382
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=7.5e-34 Score=326.50 Aligned_cols=223 Identities=21% Similarity=0.256 Sum_probs=179.2
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++++..+.. +...+.+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 778899887742110 000012469999999999999999999999999999999999876 45899999998764
Q ss_pred cc---cccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCC
Q 000523 927 QE---TFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLS 1000 (1445)
Q Consensus 927 ~~---~~~~~~gyv~Q~d~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LS 1000 (1445)
.. ..++.++|++|++. +.+.+|+.|++.+....+. ........+.++++++.++|. +..+.. +..||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcC
Confidence 21 22356999999874 5678899999988654432 223334445688999999994 455544 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEE
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEI 1079 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~ 1079 (1445)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 57778999999985 7999
Q ss_pred EEcCC
Q 000523 1080 YVGPL 1084 (1445)
Q Consensus 1080 y~G~~ 1084 (1445)
+.|+.
T Consensus 230 ~~~~~ 234 (267)
T PRK15112 230 ERGST 234 (267)
T ss_pred ecCCH
Confidence 88875
No 383
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=7.8e-34 Score=324.70 Aligned_cols=208 Identities=29% Similarity=0.430 Sum_probs=169.9
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1445)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+|
T Consensus 15 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (256)
T TIGR03873 15 LIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPLT 91 (256)
T ss_pred EEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCCC
Confidence 4999999999999999999999999999999999999998 9999999998765432 346999999987788899
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
|+||+.++..... +.. . .+ ..+....++++++.+||.+..++.+ .
T Consensus 92 v~e~l~~~~~~~~---------~~~------~-~~--------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 136 (256)
T TIGR03873 92 VRDVVALGRIPHR---------SLW------A-GD--------------SPHDAAVVDRALARTELSHLADRDM-----S 136 (256)
T ss_pred HHHHHHhcchhhh---------hhc------c-CC--------------CHHHHHHHHHHHHHcCcHhhhcCCc-----c
Confidence 9999987531000 000 0 00 0001124567788999976666554 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1445)
.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. . +++|+.++|+..++.+.+|+|++|++|+
T Consensus 137 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~~G~ 214 (256)
T TIGR03873 137 TLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-T-GVTVVAALHDLNLAASYCDHVVVLDGGR 214 (256)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 6999999999999999999999999999999999999999999998753 3 4556667888889999999999999999
Q ss_pred EEEecChhHHH
Q 000523 403 IVYQGPRELVL 413 (1445)
Q Consensus 403 iv~~G~~~~~~ 413 (1445)
+++.|+.+++.
T Consensus 215 i~~~g~~~~~~ 225 (256)
T TIGR03873 215 VVAAGPPREVL 225 (256)
T ss_pred EEEecCHHHhh
Confidence 99999987753
No 384
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=7.9e-34 Score=325.82 Aligned_cols=215 Identities=24% Similarity=0.317 Sum_probs=171.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC--------ccceEEEEcCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV--------PQRTAAYISQHDNH 237 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~--------~~~~~~yv~Q~d~~ 237 (1445)
++|+|+|+++++||+++|+|||||||||||++|+|.++|+...+|+|.++|.++.... .++.++|++|++.+
T Consensus 18 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (262)
T PRK09984 18 QALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFNL 97 (262)
T ss_pred EEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEcccccc
Confidence 4999999999999999999999999999999999999875223599999998874321 13568999999888
Q ss_pred CCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccc
Q 000523 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1445)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1445)
++.+||+||+.++..... . ..... ... ...+....++++++.+||++..|..+
T Consensus 98 ~~~~tv~e~l~~~~~~~~-----~----~~~~~--~~~---------------~~~~~~~~~~~~l~~~~l~~~~~~~~- 150 (262)
T PRK09984 98 VNRLSVLENVLIGALGST-----P----FWRTC--FSW---------------FTREQKQRALQALTRVGMVHFAHQRV- 150 (262)
T ss_pred ccCCcHHHHHHhhhcccc-----c----chhhh--ccc---------------ccHHHHHHHHHHHHHcCCHHHHhCCc-
Confidence 999999999987542100 0 00000 000 00011234677899999987666554
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000523 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1445)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1445)
..|||||||||+|||+|+.+|++|+|||||+|||..++..+.+.|+++.+. .+++|+.++|+..++.+.+|+|++
T Consensus 151 ----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~g~tvii~tH~~~~~~~~~d~i~~ 225 (262)
T PRK09984 151 ----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQN-DGITVVVTLHQVDYALRYCERIVA 225 (262)
T ss_pred ----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEEE
Confidence 469999999999999999999999999999999999999999999987653 345666678888889999999999
Q ss_pred ecCCeEEEecChhHH
Q 000523 398 LSDGQIVYQGPRELV 412 (1445)
Q Consensus 398 L~~G~iv~~G~~~~~ 412 (1445)
|++|++++.|+++++
T Consensus 226 l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 226 LRQGHVFYDGSSQQF 240 (262)
T ss_pred EECCEEEEeCCHHHh
Confidence 999999999998764
No 385
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=9.3e-34 Score=325.69 Aligned_cols=207 Identities=22% Similarity=0.261 Sum_probs=169.2
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCC--CCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDN--HIG 239 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 239 (1445)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +.+
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 35999999999999999999999999999999999999998 9999999988753221 246999999864 567
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc-ccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMVGD 318 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 318 (1445)
.+||.|++.+..+...... ..+....++.+++.+||. +..+..
T Consensus 103 ~~tv~~~l~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 146 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLE---------------------------------PEQREKQIIETLRQVGLLPDHASYY--- 146 (267)
T ss_pred chhHHHHHHHHHHhccCCC---------------------------------HHHHHHHHHHHHHHcCCChHHHhcC---
Confidence 8899999987653321000 001112456788999994 444543
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+..++..+||++++|
T Consensus 147 --~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 147 --PHMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQE-KQGISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred --chhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-HcCcEEEEEeCCHHHHHHhcCEEEEE
Confidence 346999999999999999999999999999999999999999999998764 33455666788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988764
No 386
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=323.85 Aligned_cols=229 Identities=17% Similarity=0.243 Sum_probs=177.7
Q ss_pred CCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhhcCCccccceeeecceeEEeCCeEEEEEcCCCCCHH
Q 000523 113 DLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKT 192 (1445)
Q Consensus 113 ~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKS 192 (1445)
+.|...++++|+++.+. ..++|+|+|+++++|++++|+||||||||
T Consensus 8 ~~~~~~l~~~~l~~~~~----------------------------------~~~il~~isl~i~~Ge~~~i~G~nGsGKS 53 (260)
T PRK10744 8 ATAPSKIQVRNLNFYYG----------------------------------KFHALKNINLDIAKNQVTAFIGPSGCGKS 53 (260)
T ss_pred cCCCceEEEEEEEEEeC----------------------------------CeEEeeceeEEEcCCCEEEEECCCCCCHH
Confidence 45667789999998762 12489999999999999999999999999
Q ss_pred HHHHHHhCCCC--CCCCceeEEEEcCccCCCc--C---ccceEEEEcCCCCCCCCCCHHHHHHHhHHhcCCCchhhhhHH
Q 000523 193 TLLLALAGKLD--PTLKVSGTVTYNGHDMDEF--V---PQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTE 265 (1445)
Q Consensus 193 TLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~--~---~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~ 265 (1445)
||+++|+|.++ |....+|+|.++|.++... . .++.++|++|++.+++ +||+||+.++..... +...
T Consensus 54 TLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~-~~~~----- 126 (260)
T PRK10744 54 TLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE-KLSR----- 126 (260)
T ss_pred HHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC-CCCH-----
Confidence 99999999986 2101289999999887421 1 2457999999887776 899999988653221 0000
Q ss_pred HHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccc
Q 000523 266 LARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALAL 345 (1445)
Q Consensus 266 ~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vl 345 (1445)
.+....++++++.+||........ ++....||||||||++||++|+.+|++|
T Consensus 127 ---------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LS~Gq~qrv~laral~~~p~ll 178 (260)
T PRK10744 127 ---------------------------AEMDERVEWALTKAALWNEVKDKL-HQSGYSLSGGQQQRLCIARGIAIRPEVL 178 (260)
T ss_pred ---------------------------HHHHHHHHHHHHHcCCChhhHHHH-hcCCCCCCHHHHHHHHHHHHHHCCCCEE
Confidence 001123566788888743211111 2344579999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecChhHHH
Q 000523 346 FMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 346 lLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1445)
+|||||+|||..++..+.+.|+++. .+ ++|+.++|+..++.+++|++++|++|+++..|+.+++.
T Consensus 179 lLDEPt~~LD~~~~~~l~~~L~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 179 LLDEPCSALDPISTGRIEELITELK--QD-YTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred EEcCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 9999999999999999999999873 33 45666788888889999999999999999999988764
No 387
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=321.50 Aligned_cols=219 Identities=22% Similarity=0.246 Sum_probs=175.1
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1445)
.+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 367788877663 246999999999999999999999999999999999976531 3589999999
Q ss_pred ccCCc----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000523 923 YPKKQ----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 998 (1445)
Q Consensus 923 ~~~~~----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1445)
.++.. ...++.++|++|++.+++ .||.||+.+...... ....+..++.++++++.+++.+........ ....
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLKS-HAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhhc-Cccc
Confidence 87531 234567999999988887 899999987643221 111233345577888888875421111111 1467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEE
Q 000523 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1078 (1445)
Q Consensus 999 LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~ 1078 (1445)
||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++.+ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i 222 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GEL 222 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 689999999986 57888999999985 799
Q ss_pred EEEcCC
Q 000523 1079 IYVGPL 1084 (1445)
Q Consensus 1079 ~y~G~~ 1084 (1445)
+..|+.
T Consensus 223 ~~~g~~ 228 (249)
T PRK14253 223 VEHDDT 228 (249)
T ss_pred EEeCCH
Confidence 999875
No 388
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-34 Score=339.81 Aligned_cols=195 Identities=24% Similarity=0.362 Sum_probs=168.5
Q ss_pred cceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-------CccceEEEEcCCCCCCCCCC
Q 000523 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-------VPQRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 242 (1445)
|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++... ..++.++|++|+..+++++|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999998 99999999886531 12467999999999999999
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
|+||+.|+.+.. ....++++++.+||++..+..+ +
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999998853200 0123567788999987666544 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1445)
.|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+. .+++++.++|+..++..++|++++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~-~g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLARE-INIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHh-cCCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 69999999999999999999999999999999999999999999987653 34556668889999999999999999999
Q ss_pred EEEecChhHHH
Q 000523 403 IVYQGPRELVL 413 (1445)
Q Consensus 403 iv~~G~~~~~~ 413 (1445)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999999884
No 389
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=8.3e-34 Score=315.50 Aligned_cols=199 Identities=21% Similarity=0.347 Sum_probs=164.9
Q ss_pred eeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC-ccceEEEEcCCCCCCCCCCHHH
Q 000523 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-PQRTAAYISQHDNHIGEMTVRE 245 (1445)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 245 (1445)
+++|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 357999999999999999999999999999999999998 999999999875432 2467999999998899999999
Q ss_pred HHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCC
Q 000523 246 TLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGIS 325 (1445)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1445)
|+.+..... .... .+....++++++.+||++..++.+ +.||
T Consensus 90 n~~~~~~~~-~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (213)
T TIGR01277 90 NIGLGLHPG-LKLN---------------------------------AEQQEKVVDAAQQVGIADYLDRLP-----EQLS 130 (213)
T ss_pred HHHhHhhcc-CCcc---------------------------------HHHHHHHHHHHHHcCcHHHhhCCc-----ccCC
Confidence 998753210 0000 001123566788999987666544 4699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEE
Q 000523 326 GGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1445)
Q Consensus 326 GGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~ 405 (1445)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.. ..+++|+.++|+..++.+.+|++++|++|++++
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCS-ERQRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 9999999999999999999999999999999999999999998764 334556667888888899999999999999998
Q ss_pred ecC
Q 000523 406 QGP 408 (1445)
Q Consensus 406 ~G~ 408 (1445)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 874
No 390
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=325.68 Aligned_cols=204 Identities=22% Similarity=0.289 Sum_probs=168.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC---ccceEEEEcCCCC-CCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV---PQRTAAYISQHDN-HIGEM 241 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1445)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++..
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~ 97 (277)
T PRK13642 21 NQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVGA 97 (277)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhccC
Confidence 4899999999999999999999999999999999999998 999999999875432 2467999999864 67788
Q ss_pred CHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccccc
Q 000523 242 TVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMI 321 (1445)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1445)
||.||+.++....+.. + .+....++++++.+||.+..++. +
T Consensus 98 tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-----~ 138 (277)
T PRK13642 98 TVEDDVAFGMENQGIP-R---------------------------------EEMIKRVDEALLAVNMLDFKTRE-----P 138 (277)
T ss_pred CHHHHHHhhHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCHhHhhCC-----c
Confidence 9999998764321110 0 00112456778889997766654 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCC
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G 401 (1445)
..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.. ..+++|+.++|+..++. .+|+|++|++|
T Consensus 139 ~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~g~tiil~sH~~~~~~-~~d~i~~l~~G 216 (277)
T PRK13642 139 ARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKE-KYQLTVLSITHDLDEAA-SSDRILVMKAG 216 (277)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHH-hCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998764 32445555778888876 69999999999
Q ss_pred eEEEecChhHHH
Q 000523 402 QIVYQGPRELVL 413 (1445)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1445)
+++..|+.+++.
T Consensus 217 ~i~~~g~~~~~~ 228 (277)
T PRK13642 217 EIIKEAAPSELF 228 (277)
T ss_pred EEEEeCCHHHHh
Confidence 999999998874
No 391
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-34 Score=337.11 Aligned_cols=190 Identities=23% Similarity=0.379 Sum_probs=167.0
Q ss_pred cceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCCCH
Q 000523 877 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTI 949 (1445)
Q Consensus 877 ~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~d~~~~~lTv 949 (1445)
|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.+||++|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999876 458999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000523 950 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1445)
Q Consensus 950 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgL 1029 (1445)
+||+.|+.. ...++.++++++.++|.+..+.. +..||||||||++|||+|+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRY-----PGSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999988532 11234578999999998877766 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1030 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1030 D~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
|+.++..+++.|+++.++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999999765 899999999986 68889999999985 799999986
No 392
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=330.87 Aligned_cols=222 Identities=18% Similarity=0.215 Sum_probs=179.7
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC---CeEEEEEEEc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 921 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 921 (1445)
..++++|+++.+.. +.+.+|+|||++|++||++||+|||||||||||++|+|.... .+.+|+|.++
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 36889999988742 123599999999999999999999999999999999997542 2458999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000523 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 996 (1445)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1445)
|.++.. ...++.++||+|++.+++ .|++||+.|+..... ..+.+..++.++++++.++|.+-.++.++.. .
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~--~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~-~ 223 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNG--INDRKILEKIVEKSLKSAALWDEVKDDLDKA-G 223 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcC--CChHHHHHHHHHHHHHHcCCcchhhhhhhCC-c
Confidence 998742 234677999999988775 799999998643221 1112223345678889888854333344433 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
.+||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++.+ ++|||+++|++. .+.+.+|++++|++ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999875 699999999986 47778999999985 7
Q ss_pred EEEEEcCC
Q 000523 1077 QEIYVGPL 1084 (1445)
Q Consensus 1077 ~~~y~G~~ 1084 (1445)
+++..|+.
T Consensus 301 ~i~e~g~~ 308 (329)
T PRK14257 301 WIEEAGET 308 (329)
T ss_pred EEEEeCCH
Confidence 99999986
No 393
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=9.1e-34 Score=337.59 Aligned_cols=194 Identities=23% Similarity=0.376 Sum_probs=168.9
Q ss_pred cceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCCCH
Q 000523 877 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTI 949 (1445)
Q Consensus 877 ~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~d~~~~~lTv 949 (1445)
|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 8999999999999999999999999999999876 458999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000523 950 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1445)
Q Consensus 950 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgL 1029 (1445)
+||+.|+.... ...+.++.++++++.++|.+..+.. +..|||||||||+|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRL-----PGRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99999865321 1223345688999999998877766 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1030 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1030 D~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
|+.++..+++.|+++.++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999765 899999999986 57888999999985 799999885
No 394
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=324.30 Aligned_cols=208 Identities=22% Similarity=0.310 Sum_probs=166.1
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC-----CCCceeEEEEcCccCCCc-----CccceEEEEcCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP-----TLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~-----~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1445)
.+|+|+|++|++|++++|+|||||||||||++|+|.++| + +|+|+++|+++... ..++.++|++|++
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 109 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRV---TGKITLDGEDIYDPRLDVVELRARVGMVFQKP 109 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---ceEEEECCEECcccccchHHHhhceEEEecCC
Confidence 499999999999999999999999999999999999874 5 89999999987532 1245799999988
Q ss_pred CCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccc
Q 000523 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1445)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1445)
..++ .||.||+.++.+..+..... .+....++++++.+||.+.....
T Consensus 110 ~~~~-~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 156 (267)
T PRK14235 110 NPFP-KSIYENVAYGPRIHGLARSK--------------------------------AELDEIVETSLRKAGLWEEVKDR 156 (267)
T ss_pred CCCC-CcHHHHHHHHHHhcccccch--------------------------------HHHHHHHHHHHHHcCCchhhhHH
Confidence 7776 49999999875432210000 00112356678888886421111
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
. ++.++.|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ + .+|+.++|+..++..++|++
T Consensus 157 ~-~~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~-~tiiivtH~~~~~~~~~d~v 232 (267)
T PRK14235 157 L-HEPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--N-YTIVIVTHSMQQAARVSQRT 232 (267)
T ss_pred h-hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--C-CeEEEEEcCHHHHHhhCCEE
Confidence 1 234557999999999999999999999999999999999999999999998743 3 45666788888999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000523 396 ILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1445)
++|++|+++.+|+.+++.
T Consensus 233 ~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 233 AFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 395
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-33 Score=314.95 Aligned_cols=191 Identities=25% Similarity=0.385 Sum_probs=162.8
Q ss_pred cceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc-------ccccceEEEeccCCCCCCCCCH
Q 000523 877 GVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTI 949 (1445)
Q Consensus 877 ~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~Q~d~~~~~lTv 949 (1445)
|+|++|++ |+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 9999999999999999999999875 458999999987531 1235679999999988889999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000523 950 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1445)
Q Consensus 950 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgL 1029 (1445)
.|++.+..... .....++.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 1223345678899999998766654 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1030 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1030 D~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
|+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999765 899999999986 47788999999985 7887765
No 396
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3.6e-32 Score=354.58 Aligned_cols=210 Identities=26% Similarity=0.389 Sum_probs=176.7
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCcc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 924 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1445)
..++++|++|+++. .++.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQ--PWSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEe
Confidence 46999999999852 12469999999999999999999999999999999999876 458999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000523 925 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 994 (1445)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1445)
+.+ ..+++.+|||+|++.+++ .|++||+.++. ++.+. +.++++++..++.+. .|+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~-----~~~~~----~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD-----PTIPD----ADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC-----CCCCH----HHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 653 457889999999998875 69999997641 22332 336677777777653 35566654
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec
Q 000523 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|+++|+++ ....+|++++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 368999999999999999999999999999999999999999999986 4899999999985 4677999999985
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|+++..|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 899999985
No 397
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-34 Score=291.18 Aligned_cols=200 Identities=27% Similarity=0.390 Sum_probs=176.1
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCHHH
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTIYE 951 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv~E 951 (1445)
..+|+|+|+.|.+||.++++||||||||||||+++|..+ +..|+|.+||.++.... ..-|.|+|++.++|.+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPg--aergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPG--AERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCC--ccceeEeccCccchhhHHHH
Confidence 358999999999999999999999999999999999887 56899999999876432 22488999999999999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000523 952 SLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1031 (1445)
Q Consensus 952 ~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~ 1031 (1445)
|+.|+..++. +++.++.+.+.+.+..+||.+..+.. +-.||||||||+.|||||..+|+.|+||||.+.||+
T Consensus 94 NvafgL~l~G---i~k~~R~~~a~q~l~~VgL~~~~~~~-----i~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLRG---IEKAQRREIAHQMLALVGLEGAEHKY-----IWQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhcC---CCHHHHHHHHHHHHHHhCcccccccc-----eEeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 9999998874 66788899999999999999887766 457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecC-cEEEEEcCC
Q 000523 1032 RAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG-GQEIYVGPL 1084 (1445)
Q Consensus 1032 ~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~g-G~~~y~G~~ 1084 (1445)
-+++.++++|-++.+ +|+.++++||+... ..-+.+++++|+.| |+++..=|+
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ieE-AlflatrLvvlsp~pgRvv~~~~~ 219 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIEE-ALFLATRLVVLSPGPGRVVERLPL 219 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHHH-HHhhhheeEEecCCCceeeEecCC
Confidence 999999999998864 69999999999864 44467999999843 577776665
No 398
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=4.2e-34 Score=363.18 Aligned_cols=257 Identities=22% Similarity=0.346 Sum_probs=190.0
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRI 157 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~ 157 (1445)
.++.+..++|+.++.+.+++ ..+..+....+.+..+++++||++.++.
T Consensus 299 ~~~~~~~~~ri~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~~~v~~~y~~--------------------------- 346 (585)
T TIGR01192 299 IFEARAKLEDFFDLEDSVFQ-----REEPADAPELPNVKGAVEFRHITFEFAN--------------------------- 346 (585)
T ss_pred HHHHHHHHHHHHHHHcCCcc-----ccCCccCCCCCCCCCeEEEEEEEEECCC---------------------------
Confidence 35666777777777665433 1100010111122346999999998731
Q ss_pred cCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCC
Q 000523 158 IPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQH 234 (1445)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1445)
+ .++|+|+|+++++|+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|+
T Consensus 347 ---~---~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~ 417 (585)
T TIGR01192 347 ---S---SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPT---VGQILIDGIDINTVTRESLRKSIATVFQD 417 (585)
T ss_pred ---C---CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCC---CCEEEECCEEhhhCCHHHHHhheEEEccC
Confidence 1 13899999999999999999999999999999999999998 9999999998876543 4689999998
Q ss_pred CCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccc
Q 000523 235 DNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADT 314 (1445)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1445)
+.++ +.|++||+.++.. ....+.+.++++.. + .++. ...+++..||
T Consensus 418 ~~lf-~~ti~~Ni~~~~~----~~~~~~~~~a~~~~---~------------------------~~~~--i~~l~~g~~t 463 (585)
T TIGR01192 418 AGLF-NRSIRENIRLGRE----GATDEEVYEAAKAA---A------------------------AHDF--ILKRSNGYDT 463 (585)
T ss_pred CccC-cccHHHHHhcCCC----CCCHHHHHHHHHHh---C------------------------cHHH--HHhccccccc
Confidence 7655 5799999988531 11111111111110 0 0111 2235667789
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
.+|+. ..+||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|++.. .+.|+|+ ++|..+.+ ..+|+
T Consensus 464 ~~~~~-~~~LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~--~~~tvI~-isH~~~~~-~~~d~ 538 (585)
T TIGR01192 464 LVGER-GNRLSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALR--KNRTTFI-IAHRLSTV-RNADL 538 (585)
T ss_pred hhcCC-CCCCCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHh--CCCEEEE-EEcChHHH-HcCCE
Confidence 99875 45699999999999999999999999999999999999999999998753 3455544 56655554 67999
Q ss_pred EEEecCCeEEEecChhHHHH
Q 000523 395 IILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~~ 414 (1445)
|++|++|++++.|+++++.+
T Consensus 539 i~~l~~G~i~~~g~~~~l~~ 558 (585)
T TIGR01192 539 VLFLDQGRLIEKGSFQELIQ 558 (585)
T ss_pred EEEEECCEEEEECCHHHHHH
Confidence 99999999999999998864
No 399
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=6.6e-34 Score=338.79 Aligned_cols=199 Identities=25% Similarity=0.410 Sum_probs=169.3
Q ss_pred cceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC-------ccceEEEEcCCCCCCCCCC
Q 000523 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1445)
|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 899999999999999999999999999999999998 999999998875321 2467999999999999999
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
|+||+.|+.+... . .+....++++++.+||++..|..+ .
T Consensus 92 v~enl~~~~~~~~--~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR--P----------------------------------SERRISFERVIELLGIGHLLGRLP-----G 130 (354)
T ss_pred HHHHHHHHhhccC--h----------------------------------hHHHHHHHHHHHHcCChhHhcCCh-----h
Confidence 9999998653210 0 001123567889999987766554 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1445)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEF-GIPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 699999999999999999999999999999999999999999999876533 4556667888899999999999999999
Q ss_pred EEEecChhHHH
Q 000523 403 IVYQGPRELVL 413 (1445)
Q Consensus 403 iv~~G~~~~~~ 413 (1445)
+++.|+++++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999988774
No 400
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=5.3e-34 Score=317.25 Aligned_cols=194 Identities=24% Similarity=0.394 Sum_probs=160.9
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCc-----CccceEEEEcCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHIGE 240 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~~ 240 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.
T Consensus 14 ~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (213)
T cd03262 14 HVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPH 90 (213)
T ss_pred EeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCCC
Confidence 4999999999999999999999999999999999999998 99999999887421 123679999999888889
Q ss_pred CCHHHHHHHhHH-hcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 241 MTVRETLAFSAR-CQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 241 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
+||+||+.++.. ..+.. ..+....++++++.+||++..++.+
T Consensus 91 ~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~--- 133 (213)
T cd03262 91 LTVLENITLAPIKVKGMS----------------------------------KAEAEERALELLEKVGLADKADAYP--- 133 (213)
T ss_pred CcHHHHHHhHHHHhcCCC----------------------------------HHHHHHHHHHHHHHcCCHhHhhhCc---
Confidence 999999988642 11100 0001123566788899987666544
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|+..++.+++|++++|+
T Consensus 134 --~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sh~~~~~~~~~d~i~~l~ 209 (213)
T cd03262 134 --AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-E-GMTMVVVTHEMGFAREVADRVIFMD 209 (213)
T ss_pred --cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999998764 3 4456667888899999999999999
Q ss_pred CCeE
Q 000523 400 DGQI 403 (1445)
Q Consensus 400 ~G~i 403 (1445)
+|++
T Consensus 210 ~g~i 213 (213)
T cd03262 210 DGRI 213 (213)
T ss_pred CCcC
Confidence 9974
No 401
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=322.49 Aligned_cols=220 Identities=21% Similarity=0.283 Sum_probs=177.1
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC-e--EEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-Y--ITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~-~--~~G~i~i~g 922 (1445)
.+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 477888887763 235999999999999999999999999999999999976532 2 479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.++.. ...++.++|++|++.+++ .|++||+.+....+.. .+....++.++++++.+++.+....... ..+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 149 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISAK--LPQADLDEIVESALKGAALWQEVKDKLN-KSAL 149 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHcCCcchhhhHhc-CCcc
Confidence 87532 234567999999988887 8999999886543321 1223334567788998888431111111 1246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec---
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR--- 1074 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~--- 1074 (1445)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+.
T Consensus 150 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~~~~~ 227 (259)
T PRK14260 150 GLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFSTDES 227 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEeccCC
Confidence 7999999999999999999999999999999999999999999999865 699999999997 58889999999973
Q ss_pred -CcEEEEEcCC
Q 000523 1075 -GGQEIYVGPL 1084 (1445)
Q Consensus 1075 -gG~~~y~G~~ 1084 (1445)
.|++++.|+.
T Consensus 228 ~~G~i~~~~~~ 238 (259)
T PRK14260 228 RIGQMVEFGVT 238 (259)
T ss_pred CCceEEEeCCH
Confidence 4899999986
No 402
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=7.1e-34 Score=319.80 Aligned_cols=207 Identities=24% Similarity=0.301 Sum_probs=167.6
Q ss_pred eeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC----CCCceeEEEEcCccCCCcCcc-ceEEEEcCCCC--CCC
Q 000523 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP----TLKVSGTVTYNGHDMDEFVPQ-RTAAYISQHDN--HIG 239 (1445)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~--~~~ 239 (1445)
+|+|+|+++++|++++|+||||||||||+++|+|.++| + +|+|.++|+++.....+ +.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999998 7 99999999987654332 57999999874 556
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
.+|+.||+.+.....+.. . .+....++++++.+||++.. ...++
T Consensus 78 ~~t~~~~~~~~~~~~~~~---------~-------------------------~~~~~~~~~~l~~~~l~~~~--~~~~~ 121 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKL---------S-------------------------KQARALILEALEAVGLPDPE--EVLKK 121 (230)
T ss_pred ccCHHHHHHHHHHHcCcc---------H-------------------------HHHHHHHHHHHHHcCCCchH--HHHhC
Confidence 789999998754321100 0 00122456788999997420 11223
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
.+..|||||||||+||++|+.+|++++|||||+|||..+...+.+.|+++.+ ..+++|+.++|+..++..++|++++|+
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQ-LFGTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4456999999999999999999999999999999999999999999998754 334556667888889999999999999
Q ss_pred CCeEEEecChhHHH
Q 000523 400 DGQIVYQGPRELVL 413 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1445)
+|+++..|+.+++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999988774
No 403
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=322.16 Aligned_cols=221 Identities=20% Similarity=0.261 Sum_probs=178.3
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1445)
.++++|+++.+. +..+|+|+|+++++||+++|+|+||||||||+++|+|..++. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478899988763 235999999999999999999999999999999999976531 2369999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.++.. ...++.++|++|+..+++ .|+.||+.+....... ....+.++.+.++++.+++.+..+...+. .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87531 234567999999988887 8999999876433211 12223345678899999886432222222 246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecC-
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG- 1075 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~g- 1075 (1445)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|++. ++.+.+|++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999865 4899999999986 588899999999864
Q ss_pred ---cEEEEEcCC
Q 000523 1076 ---GQEIYVGPL 1084 (1445)
Q Consensus 1076 ---G~~~y~G~~ 1084 (1445)
|+++++|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 899999986
No 404
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=323.03 Aligned_cols=229 Identities=20% Similarity=0.273 Sum_probs=179.6
Q ss_pred CCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhhcCCccccceeeecceeEEeCCeEEEEEcCCCCCHH
Q 000523 113 DLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKT 192 (1445)
Q Consensus 113 ~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKS 192 (1445)
+.+...++++||++.+. .+++|+|+|+++++||+++|+||||||||
T Consensus 15 ~~~~~~l~~~nl~~~~~----------------------------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKS 60 (267)
T PRK14237 15 PEEEIALSTKDLHVYYG----------------------------------KKEAIKGIDMQFEKNKITALIGPSGSGKS 60 (267)
T ss_pred CCCCeEEEEeeEEEEEC----------------------------------CeeeEeeeEEEEcCCCEEEEECCCCCCHH
Confidence 44455789999998762 12489999999999999999999999999
Q ss_pred HHHHHHhCCCCCC--CCceeEEEEcCccCCCc-----CccceEEEEcCCCCCCCCCCHHHHHHHhHHhcCCCchhhhhHH
Q 000523 193 TLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTE 265 (1445)
Q Consensus 193 TLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~ 265 (1445)
|||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.+++ .||+||+.++.+..+....
T Consensus 61 TLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~------ 133 (267)
T PRK14237 61 TYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERAGVKDK------ 133 (267)
T ss_pred HHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhcCCCCH------
Confidence 9999999998641 01299999999987532 12457999999887776 6999999886532211000
Q ss_pred HHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhcCCccc
Q 000523 266 LARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVGPALAL 345 (1445)
Q Consensus 266 ~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vl 345 (1445)
++....++++++.++|.+..++.. ++.++.||||||||++|||+|+.+|+++
T Consensus 134 ---------------------------~~~~~~~~~~l~~~~l~~~i~~~~-~~~~~~LS~G~~qrl~laral~~~p~ll 185 (267)
T PRK14237 134 ---------------------------KVLDEIVETSLKQAALWDQVKDDL-HKSALTLSGGQQQRLCIARAIAVKPDIL 185 (267)
T ss_pred ---------------------------HHHHHHHHHHHHHcCCCchhhhhh-cCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 001123556788888864332222 3456679999999999999999999999
Q ss_pred eeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEecChhHHH
Q 000523 346 FMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 346 lLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1445)
+|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.++||++++|++|++++.|+.+++.
T Consensus 186 lLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 186 LMDEPASALDPISTMQLEETMFELK--KN-YTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIF 250 (267)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999873 33 45666778888999999999999999999999988764
No 405
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=323.55 Aligned_cols=220 Identities=22% Similarity=0.248 Sum_probs=177.4
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC---CeEEEEEEEc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITIS 921 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~ 921 (1445)
..++++|+++.+. ++.+|+|+|+.|++||+++|+|+||||||||+++|+|.... .+.+|+|.++
T Consensus 24 ~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~ 90 (272)
T PRK14236 24 TALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLD 90 (272)
T ss_pred cEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEEC
Confidence 3588999988763 23699999999999999999999999999999999998642 1358999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000523 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 996 (1445)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1445)
|.+... ..+++.++|++|++.+++. |++||+.+...... ....+..++.++++++.+++.+......+. .+
T Consensus 91 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~ 166 (272)
T PRK14236 91 GQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLHE-NA 166 (272)
T ss_pred CEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhhC-Cc
Confidence 987642 2345679999999888875 99999987654321 111223345578889998886421111111 14
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|+++ ++.+.+|++++|++ |
T Consensus 167 ~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G 243 (272)
T PRK14236 167 FGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMYM-G 243 (272)
T ss_pred ccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEEC-C
Confidence 67999999999999999999999999999999999999999999999975 789999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 000523 1077 QEIYVGPL 1084 (1445)
Q Consensus 1077 ~~~y~G~~ 1084 (1445)
+++..|+.
T Consensus 244 ~i~~~g~~ 251 (272)
T PRK14236 244 KLVEYGDT 251 (272)
T ss_pred EEEecCCH
Confidence 99999875
No 406
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=6e-34 Score=320.12 Aligned_cols=202 Identities=27% Similarity=0.322 Sum_probs=165.8
Q ss_pred eecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCCHHHHH
Q 000523 168 LKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMTVRETL 247 (1445)
Q Consensus 168 L~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 247 (1445)
|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999998 9999999998765432 248999999889999999999
Q ss_pred HHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChh
Q 000523 248 AFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGG 327 (1445)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 327 (1445)
.++.+....+.. ..+....++++++.+||++..++.+ +.||||
T Consensus 76 ~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPDLS--------------------------------KSERRAIVEEHIALVGLTEAADKRP-----GQLSGG 118 (230)
T ss_pred HHHHHhcccCCC--------------------------------HHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHH
Confidence 876321000000 0011223567888999987666554 469999
Q ss_pred hhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCeEEEec
Q 000523 328 QKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1445)
Q Consensus 328 qrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~iv~~G 407 (1445)
|||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+. .+.+|+.++|+..++.+.+|+|++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~-~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEE-HRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 999999999999999999999999999999999999999987653 3445666788888999999999999999999988
Q ss_pred ChhHH
Q 000523 408 PRELV 412 (1445)
Q Consensus 408 ~~~~~ 412 (1445)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65543
No 407
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=9e-34 Score=318.94 Aligned_cols=201 Identities=24% Similarity=0.315 Sum_probs=166.7
Q ss_pred EeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC--eEEEEEEEcCccCCcccc-cceEEEeccCCC--CCCCCC
Q 000523 874 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNITISGYPKKQETF-ARISGYCEQNDI--HSPFVT 948 (1445)
Q Consensus 874 iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~Q~d~--~~~~lT 948 (1445)
+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 478999999999999999999999999999999987531 158999999987654322 357999999974 556789
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc---cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000523 949 IYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP---LRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1025 (1445)
Q Consensus 949 v~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEP 1025 (1445)
+.|++.+....... .....++.++++++.+++.+ ..+.. +..|||||||||+|||+|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLGK---LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcCc---cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 99999775433211 12333456889999999973 34443 457999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1026 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1026 TsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
|+|||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999998764 899999999987 57788999999985 799998875
No 408
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=319.93 Aligned_cols=216 Identities=23% Similarity=0.277 Sum_probs=174.6
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCe---EEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGY---ITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~---~~G~i~i~g 922 (1445)
-+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 366788877663 2469999999999999999999999999999999999865322 379999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 993 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1445)
.+... ..+++.++|++|++.+++.+|+.||+.+...... ....+...+.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87642 2345679999999999999999999987643321 1122333445667777777642 22332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
++.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999864 799999999987 5777899999998
Q ss_pred cCcEEEEEcCC
Q 000523 1074 RGGQEIYVGPL 1084 (1445)
Q Consensus 1074 ~gG~~~y~G~~ 1084 (1445)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 799999885
No 409
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=321.89 Aligned_cols=211 Identities=22% Similarity=0.335 Sum_probs=166.5
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
++|+|+|+++++||+++|+|||||||||||++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 48999999999999999999999999999999999987410 1289999999887421 1235799999998889
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+.+||+||+.++....+.... .+....++.+++.+||........ +
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRNK---------------------------------KDLDELVEKSLRGANLWNEVKDRL-D 143 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-h
Confidence 999999999886543210000 001123566778888742111111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
..+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.+.+|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tviivsH~~~~~~~~~d~i~~l 220 (258)
T PRK14241 144 KPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELK--QD-YTIVIVTHNMQQAARVSDQTAFF 220 (258)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEecCHHHHHHhCCEEEEE
Confidence 3455799999999999999999999999999999999999999999999874 23 45666788888999999999999
Q ss_pred c------CCeEEEecChhHHH
Q 000523 399 S------DGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~------~G~iv~~G~~~~~~ 413 (1445)
+ +|++++.|+++++.
T Consensus 221 ~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 221 NLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred ecccCCCCceEEecCCHHHHH
Confidence 6 79999999988764
No 410
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-33 Score=320.36 Aligned_cols=209 Identities=19% Similarity=0.274 Sum_probs=165.8
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCC---CCCCCCceeEEEEcCccCCCcC-----ccceEEEEcCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGK---LDPTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNH 237 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~---~~~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1445)
++|+|+|+++++|++++|+||||||||||+++|+|. .+|. ..+|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 95 (250)
T PRK14245 17 HALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNP 95 (250)
T ss_pred eEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCcc
Confidence 499999999999999999999999999999999997 3331 12899999999875421 23579999998877
Q ss_pred CCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccc
Q 000523 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1445)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1445)
++ .||+||+.++.+..+.... ......++++++.+||.+...+..
T Consensus 96 ~~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 140 (250)
T PRK14245 96 FP-KSIFENVAYGLRVNGVKDN---------------------------------AFIRQRVEETLKGAALWDEVKDKL- 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCcchhhhh-
Confidence 76 6999999886543211000 001123566788888864322222
Q ss_pred ccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEE
Q 000523 318 DEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIIL 397 (1445)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iil 397 (1445)
+..++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.+.+|++++
T Consensus 141 ~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~v~~ 217 (250)
T PRK14245 141 KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK--KD-YTIVIVTHNMQQAARVSDKTAF 217 (250)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhCCEEEE
Confidence 23455799999999999999999999999999999999999999999999873 34 4566678888899999999999
Q ss_pred ecCCeEEEecChhHHH
Q 000523 398 LSDGQIVYQGPRELVL 413 (1445)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1445)
|++|++++.|+++++.
T Consensus 218 l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 218 FYMGEMVEYDDTKKIF 233 (250)
T ss_pred EECCEEEEECCHHHHh
Confidence 9999999999998874
No 411
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.1e-34 Score=395.07 Aligned_cols=259 Identities=19% Similarity=0.232 Sum_probs=195.8
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCC-cceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLP-KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1445)
.+....++||+.+..+.++|.-. ..+ .......-| ..+|+|+||++.|..
T Consensus 1196 ~~~~~~s~eRi~e~~~~~~e~~~--~~~-~~~~~~~~p~~g~I~f~nVsf~Y~~-------------------------- 1246 (1495)
T PLN03232 1196 AENSLNSVERVGNYIDLPSEATA--IIE-NNRPVSGWPSRGSIKFEDVHLRYRP-------------------------- 1246 (1495)
T ss_pred HHHHHHHHHHHHHHhcCCccccc--ccc-CCCCCCCCCCCCcEEEEEEEEEECC--------------------------
Confidence 45667888999998876655100 000 000000112 357999999999842
Q ss_pred hcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcC
Q 000523 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1445)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1445)
...++|+|+|++|+|||.++|+||+|||||||+++|.|.++|+ +|+|.+||.|+++... ++.++||||
T Consensus 1247 ------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p~---~G~I~IdG~di~~i~~~~lR~~i~iVpQ 1317 (1495)
T PLN03232 1247 ------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVELE---KGRIMIDDCDVAKFGLTDLRRVLSIIPQ 1317 (1495)
T ss_pred ------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcCC---CceEEECCEEhhhCCHHHHHhhcEEECC
Confidence 1124999999999999999999999999999999999999998 9999999999987654 578999999
Q ss_pred CCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccc
Q 000523 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1445)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1445)
++.+|. .||||||.++.. ...+.+.++.++. +. ++. +-.+++..|
T Consensus 1318 dp~LF~-gTIr~NL~~~~~-----~sdeei~~al~~a---~l------------------------~~~--I~~lp~GLd 1362 (1495)
T PLN03232 1318 SPVLFS-GTVRFNIDPFSE-----HNDADLWEALERA---HI------------------------KDV--IDRNPFGLD 1362 (1495)
T ss_pred CCeeeC-ccHHHHcCCCCC-----CCHHHHHHHHHHc---CC------------------------HHH--HHhCcCCCC
Confidence 886665 699999986421 1112222222111 10 111 124677889
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcC
Q 000523 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1445)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1445)
|.||+.+. +||||||||++|||||+++|+||+||||||+||+.|...|.+.|++.. .++| ++++.|.. ++...||
T Consensus 1363 t~v~e~G~-~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~--~~~T-vI~IAHRl-~ti~~~D 1437 (1495)
T PLN03232 1363 AEVSEGGE-NFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF--KSCT-MLVIAHRL-NTIIDCD 1437 (1495)
T ss_pred ceecCCCC-CCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc--CCCE-EEEEeCCH-HHHHhCC
Confidence 99998655 599999999999999999999999999999999999999999999752 3344 55566655 5556699
Q ss_pred eEEEecCCeEEEecChhHHHH
Q 000523 394 DIILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1445)
+|++|++|+|++.|+++++++
T Consensus 1438 rIlVL~~G~ivE~Gt~~eLl~ 1458 (1495)
T PLN03232 1438 KILVLSSGQVLEYDSPQELLS 1458 (1495)
T ss_pred EEEEEECCEEEEECCHHHHHh
Confidence 999999999999999999874
No 412
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=4.5e-32 Score=353.20 Aligned_cols=211 Identities=25% Similarity=0.372 Sum_probs=177.0
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCcc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 924 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1445)
..++++|++|+++. ++.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 472 ~~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEE
Confidence 46999999999841 2359999999999999999999999999999999999876 468999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000523 925 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 994 (1445)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1445)
+.+ ..+++.+|||+|++.+++ -|++||+.++. .++.+. +.++++++..++.+. .|+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~l~~----~~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFS-GSILENLLLGA----KENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehh-HHHHHHHhccC----CCCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 643 457788999999998876 59999998752 122332 235667777776543 35666654
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec
Q 000523 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 3689999999999999999999999999999999999999999999985 4799999999986 5678999999985
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|+++..|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 899999984
No 413
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=353.49 Aligned_cols=218 Identities=26% Similarity=0.331 Sum_probs=183.0
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++++. ++.+|+|+|++|++||++||+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYT--RDAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECC
Confidence 67888887763 2469999999999999999999999999999999999876 45899999998754
Q ss_pred cc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 927 QE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 927 ~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
.. ..++.+||++|++.+++.+||+|++.++...+.. ...+....++.++++++.++|.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 21 1245699999999889999999999886432211 11223334456889999999988777653 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+.|.|||+++|++. ++.+.+|++++|++ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877899999999986 57788999999985 799999
Q ss_pred cCCCC
Q 000523 1082 GPLGR 1086 (1445)
Q Consensus 1082 G~~~~ 1086 (1445)
|+..+
T Consensus 223 ~~~~~ 227 (501)
T PRK10762 223 REVAD 227 (501)
T ss_pred cCcCc
Confidence 98754
No 414
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=319.63 Aligned_cols=210 Identities=20% Similarity=0.326 Sum_probs=165.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCcC-----ccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 238 (1445)
.+|+|+|+++++||+++|+|||||||||||++|+|..+|. ...+|+|.++|+++.... .++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (251)
T PRK14270 18 QALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNPF 97 (251)
T ss_pred eeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCcC
Confidence 4899999999999999999999999999999999998751 013899999999875321 245699999998777
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+ +|++||+.|.....+.... .+....++.+++.+||.+...... +
T Consensus 98 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 142 (251)
T PRK14270 98 P-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKDDL-K 142 (251)
T ss_pred C-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-h
Confidence 6 8999999986543221000 001123455677887742111111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
...+.||||||||++||++++.+|++++|||||+|||+.++.++.+.|+++.. + .+|+.++|+..++.+.+|++++|
T Consensus 143 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~d~v~~l 219 (251)
T PRK14270 143 KSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--E-YTIVIVTHNMQQASRVSDYTAFF 219 (251)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEEcCHHHHHHhcCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 45566778888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|++++.|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 220 LMGDLIEFNKTEKIF 234 (251)
T ss_pred ECCeEEEeCCHHHHh
Confidence 999999999998864
No 415
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.4e-33 Score=320.15 Aligned_cols=214 Identities=21% Similarity=0.278 Sum_probs=174.6
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC--eEEEEEEEcC
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG--YITGNITISG 922 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~--~~~G~i~i~g 922 (1445)
..++++|+++.++ +.+|+|+|++|++||+++|+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 3578899987752 24899999999999999999999999999999999987531 1689999999
Q ss_pred ccCCcccc-cceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc---ccccccCCCC
Q 000523 923 YPKKQETF-ARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL---RQSLVGLPGV 996 (1445)
Q Consensus 923 ~~~~~~~~-~~~~gyv~Q~d~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~---~~~~vg~~~~ 996 (1445)
.++..... ++.++|++|++. +.+..|+.+++.+.+.... ... .++.++++++.+++.+. .+.. +
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~ 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----P 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----C
Confidence 87653322 356999999974 4566899998876443221 111 22457889999999762 3333 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecC
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~g 1075 (1445)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~- 216 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH- 216 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 679999999999999999999999999999999999999999999998764 899999999986 47788999999985
Q ss_pred cEEEEEcCC
Q 000523 1076 GQEIYVGPL 1084 (1445)
Q Consensus 1076 G~~~y~G~~ 1084 (1445)
|++++.|+.
T Consensus 217 G~i~~~~~~ 225 (254)
T PRK10418 217 GRIVEQGDV 225 (254)
T ss_pred CEEEEecCH
Confidence 799999885
No 416
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.9e-33 Score=314.13 Aligned_cols=211 Identities=23% Similarity=0.339 Sum_probs=174.8
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.+... .+.+.+|+|+|+++++|++++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5677777765310 112579999999999999999999999999999999999875 46899999998764
Q ss_pred cc------cccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000523 927 QE------TFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLS 1000 (1445)
Q Consensus 927 ~~------~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LS 1000 (1445)
.. ..++.++|++|++.+++..|+.||+.+...... ....++..+.++++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYY-----PHNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCC
Confidence 21 245679999999988888999999998654321 123344455688999999998777665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEE
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1078 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~ 1078 (1445)
+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ +.+.+|++++|++ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999876 5899999999985 4688999999985 553
No 417
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=319.18 Aligned_cols=208 Identities=19% Similarity=0.277 Sum_probs=166.7
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC---CCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD---PTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~---~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 239 (1445)
.+|+|+|+++++||+++|+||||||||||+++|+|.++ |+ +|+|+++|+++.+... ++.++|++|++.+++
T Consensus 16 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~ 92 (246)
T PRK14269 16 QALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKI---DGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV 92 (246)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCC---ceEEEECCEecccCCHHHHhhhEEEEecCCcccc
Confidence 48999999999999999999999999999999999975 45 8999999998865422 457999999887776
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
.||+||+.++.+.++.... .......++.+++.+||........ ++
T Consensus 93 -~tv~eni~~~~~~~~~~~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-~~ 138 (246)
T PRK14269 93 -KSIYENISYAPKLHGMIKN--------------------------------KDEEEALVVDCLQKVGLFEEVKDKL-KQ 138 (246)
T ss_pred -ccHHHHhhhHHhhcCcccC--------------------------------hHHHHHHHHHHHHHcCCChhhhHHh-cC
Confidence 6999999886533211000 0001123566788888853211111 23
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
..+.|||||||||+|||+|+.+|++++|||||+|||..++..+.+.|+++. . +++++.++|+..++.+.+|++++|+
T Consensus 139 ~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~-~~tiii~tH~~~~~~~~~d~i~~l~ 215 (246)
T PRK14269 139 NALALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELS--H-NLSMIMVTHNMQQGKRVADYTAFFH 215 (246)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--C-CCEEEEEecCHHHHHhhCcEEEEEE
Confidence 456799999999999999999999999999999999999999999999864 3 4556667888899999999999999
Q ss_pred CCeEEEecChhHHH
Q 000523 400 DGQIVYQGPRELVL 413 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1445)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~g~~~~~~ 229 (246)
T PRK14269 216 LGELIEFGESKEFF 229 (246)
T ss_pred CCEEEEECCHHHHH
Confidence 99999999988764
No 418
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.3e-33 Score=321.19 Aligned_cols=215 Identities=24% Similarity=0.257 Sum_probs=174.8
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCcc-
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP- 924 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~- 924 (1445)
.++++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 378888887763 2359999999999999999999999999999999999875 458999999986
Q ss_pred ----CCcc---c----ccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000523 925 ----KKQE---T----FARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSL 990 (1445)
Q Consensus 925 ----~~~~---~----~~~~~gyv~Q~d~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 990 (1445)
+... . .++.++|++|++. +.+.+|+.|++.+...... .......++.++++++.+++.+ ..+..
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346899999974 5677899999876432211 1122234456788999999963 44443
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceE
Q 000523 991 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDEL 1069 (1445)
Q Consensus 991 vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v 1069 (1445)
+..||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++.++ |.|||+++|++. .+.+.+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4679999999999999999999999999999999999999999999998764 899999999986 466789999
Q ss_pred eEEecCcEEEEEcCC
Q 000523 1070 FLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1070 ~~l~~gG~~~y~G~~ 1084 (1445)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 799999875
No 419
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-33 Score=325.09 Aligned_cols=216 Identities=24% Similarity=0.303 Sum_probs=179.6
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-+.++|+++.+... .+..+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 37788988876410 12359999999999999999999999999999999999876 4689999999876
Q ss_pred Cc---ccccceEEEeccCCC-CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 926 KQ---ETFARISGYCEQNDI-HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 926 ~~---~~~~~~~gyv~Q~d~-~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
.. ...++.+||++|++. .++..||.||+.+..... ....++..+.++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 234567999999974 566789999998764322 123334445688999999998877665 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
|||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++. + ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 9999999999864 4 46999999986 78999
Q ss_pred EcCC
Q 000523 1081 VGPL 1084 (1445)
Q Consensus 1081 ~G~~ 1084 (1445)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8885
No 420
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.4e-33 Score=321.07 Aligned_cols=206 Identities=25% Similarity=0.383 Sum_probs=167.3
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCcc-----CCCcCc-------cceEEEEcC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHD-----MDEFVP-------QRTAAYISQ 233 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~Q 233 (1445)
.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++|
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q 96 (258)
T PRK11701 20 KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQ 96 (258)
T ss_pred eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEee
Confidence 4899999999999999999999999999999999999998 9999999987 654322 246999999
Q ss_pred CCC--CCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcc-
Q 000523 234 HDN--HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV- 310 (1445)
Q Consensus 234 ~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~- 310 (1445)
++. +.+.+|+.||+.+.....+.. .. .+....++++++.+|+..
T Consensus 97 ~~~~~~~~~~~~~~~i~~~~~~~~~~-~~--------------------------------~~~~~~~~~~l~~~~l~~~ 143 (258)
T PRK11701 97 HPRDGLRMQVSAGGNIGERLMAVGAR-HY--------------------------------GDIRATAGDWLERVEIDAA 143 (258)
T ss_pred CcccccCccccHHHHHHHHHHHhccC-cH--------------------------------HHHHHHHHHHHHHcCCChh
Confidence 863 577789999997643211000 00 001123567788999963
Q ss_pred cccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHh
Q 000523 311 CADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYD 390 (1445)
Q Consensus 311 ~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~ 390 (1445)
..++. +..|||||||||+|||+|+.+|++|+|||||+|||+.+...+.+.|+++.. ..+.+|+.++|+..++.+
T Consensus 144 ~~~~~-----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tii~isH~~~~~~~ 217 (258)
T PRK11701 144 RIDDL-----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVR-ELGLAVVIVTHDLAVARL 217 (258)
T ss_pred HHhCC-----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-hcCcEEEEEeCCHHHHHH
Confidence 44443 456999999999999999999999999999999999999999999998754 335566668889999999
Q ss_pred hcCeEEEecCCeEEEecChhHHH
Q 000523 391 LFDDIILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 391 ~~D~iilL~~G~iv~~G~~~~~~ 413 (1445)
.+|+|++|++|++++.|+++++.
T Consensus 218 ~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 218 LAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred hcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999988764
No 421
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=319.03 Aligned_cols=211 Identities=21% Similarity=0.307 Sum_probs=167.2
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
.+|+|+|++|++||+++|+|||||||||||++|+|.++ |+...+|+|.++|+++... ..++.++|++|+..++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (252)
T PRK14256 18 HAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNPF 97 (252)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCCC
Confidence 49999999999999999999999999999999999986 3111289999999987532 1246799999998889
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+.+||+||+.++.+..+.... .+....++++++.+|+........ +
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14256 98 PAMSIYDNVIAGYKLNGRVNR---------------------------------SEADEIVESSLKRVALWDEVKDRL-K 143 (252)
T ss_pred CcCcHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 999999999876432110000 001123566778888754211111 1
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
..++.||||||||++||++|+.+|++++|||||+|||..++.++.+.|+++.. + ++|+.++|+..++.+.||++++|
T Consensus 144 ~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~l 220 (252)
T PRK14256 144 SNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAFF 220 (252)
T ss_pred CCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999998753 3 45666788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 221 YMGDLVECGETKKIF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 422
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-33 Score=313.06 Aligned_cols=224 Identities=23% Similarity=0.318 Sum_probs=180.7
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCC-C--CeEEEEEEEcCc
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT-G--GYITGNITISGY 923 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~-~--~~~~G~i~i~g~ 923 (1445)
++++|++.++.... +...+++||||++++||++||+|.|||||||+.++|.|..+ + ...+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~~---------g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTDA---------GVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecCC---------ccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 45677776664321 23579999999999999999999999999999999999765 2 356789999998
Q ss_pred cCC---cc---c-ccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000523 924 PKK---QE---T-FARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLP 994 (1445)
Q Consensus 924 ~~~---~~---~-~~~~~gyv~Q~d~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 994 (1445)
++- ++ . ..+.+++++|++. +.|.+||.+.+.=......... .+++.++++.++++.+++.+-...+-.
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~~~-- 149 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRLKS-- 149 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHHhh--
Confidence 643 22 1 2357999999965 6788999887765444322111 344556678899999999864332222
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
.+..|||||||||.||.||+.+|++|+.||||++||...+++|+++|+++.+ .|.|+|++|||... +.+.+|||.||.
T Consensus 150 YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~v-va~~aDri~VMY 228 (316)
T COG0444 150 YPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGV-VAEIADRVAVMY 228 (316)
T ss_pred CCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-HHHhcceEEEEE
Confidence 2578999999999999999999999999999999999999999999999986 69999999999974 889999999998
Q ss_pred cCcEEEEEcCC
Q 000523 1074 RGGQEIYVGPL 1084 (1445)
Q Consensus 1074 ~gG~~~y~G~~ 1084 (1445)
. |++|..||.
T Consensus 229 a-G~iVE~g~~ 238 (316)
T COG0444 229 A-GRIVEEGPV 238 (316)
T ss_pred C-cEEEEeCCH
Confidence 5 899999996
No 423
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=3.1e-33 Score=319.33 Aligned_cols=205 Identities=23% Similarity=0.283 Sum_probs=165.6
Q ss_pred eeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC----CCCceeEEEEcCccCCCcCcc-ceEEEEcCCCC--CCC
Q 000523 167 ILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP----TLKVSGTVTYNGHDMDEFVPQ-RTAAYISQHDN--HIG 239 (1445)
Q Consensus 167 iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~----~~~~~G~V~~~G~~~~~~~~~-~~~~yv~Q~d~--~~~ 239 (1445)
+|+|+|+++++||+++|+||||||||||+++|+|.++| + +|+|.++|++++..... +.++||+|++. +.+
T Consensus 18 il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~---~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~ 94 (254)
T PRK10418 18 LVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQT---AGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNP 94 (254)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCc---CCEEEECCeeccccccccceEEEEecCCccccCc
Confidence 89999999999999999999999999999999999998 6 99999999987543332 57999999864 446
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
..|+.+++.+.++..+... ....++++++.+||.+.. +.. +.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~------------------------------------~~~~~~~~l~~~~l~~~~-~~~-~~ 136 (254)
T PRK10418 95 LHTMHTHARETCLALGKPA------------------------------------DDATLTAALEAVGLENAA-RVL-KL 136 (254)
T ss_pred cccHHHHHHHHHHHcCCCh------------------------------------HHHHHHHHHHHcCCCChh-hhh-hc
Confidence 6799999876432211100 012356678889987521 111 23
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
..+.|||||||||+|||+|+.+|++|+|||||+|||..++..+.+.|+++++. .+++|+.++|+..++.+.+|++++|+
T Consensus 137 ~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~-~g~til~~sH~~~~~~~~~d~v~~l~ 215 (254)
T PRK10418 137 YPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQK-RALGMLLVTHDMGVVARLADDVAVMS 215 (254)
T ss_pred CCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHh-cCcEEEEEecCHHHHHHhCCEEEEEE
Confidence 44569999999999999999999999999999999999999999999987653 34566667888888899999999999
Q ss_pred CCeEEEecChhHHH
Q 000523 400 DGQIVYQGPRELVL 413 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1445)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (254)
T PRK10418 216 HGRIVEQGDVETLF 229 (254)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999988764
No 424
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=319.01 Aligned_cols=219 Identities=20% Similarity=0.238 Sum_probs=174.5
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1445)
.++++|+++.+. ++.+|+|+|++|++|++++|+||||||||||+++|+|..++. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 367888887763 235999999999999999999999999999999999976532 2369999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.+... ...++.++|++|++.+++. |++||+.+....+.. ...+..++.++++++.+++.+........ .+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLHK-SGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhhC-Ccc
Confidence 87532 1345679999999988875 999999987543321 11222334567788888875321111111 246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 799999999999999999999999999999999999999999999985 5899999999986 57788999999985 78
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 9999885
No 425
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-33 Score=319.36 Aligned_cols=219 Identities=24% Similarity=0.252 Sum_probs=175.4
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1445)
.+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 477888887763 246999999999999999999999999999999999975321 1479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.++.. ...++.++|++|++.+++. ||+||+.+....+.. ......++.++++++.+++.+......+. .+.
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 148 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLHD-SAL 148 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhhc-Chh
Confidence 87642 2335679999999988874 999999987554321 12233345678888888875321111111 246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 149 ~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14261 149 SLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-GK 225 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999875 689999999986 47788999999985 79
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14261 226 LIEFDKT 232 (253)
T ss_pred EEEcCCH
Confidence 9998885
No 426
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=319.49 Aligned_cols=218 Identities=19% Similarity=0.218 Sum_probs=176.2
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g 922 (1445)
.+..+.+++.+. ++.+|+|+|+.+++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 8 ~~~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 74 (261)
T PRK14263 8 VMDCKLDKIFYG-------------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLG 74 (261)
T ss_pred eEEEEeEEEEeC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECC
Confidence 456666665542 356999999999999999999999999999999999986431 2589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.++.. ..+++.++|++|++.++ .+|+.||+.+....+. . ....++.++++++.+++.+..+...+. ..+
T Consensus 75 ~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~~ 148 (261)
T PRK14263 75 QDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLKV-SGL 148 (261)
T ss_pred EeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhhC-Ccc
Confidence 87532 23456799999998777 5999999998765432 1 122345678899999986533222222 246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe----
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK---- 1073 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~---- 1073 (1445)
.||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 149 ~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~~ 226 (261)
T PRK14263 149 SLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDIS 226 (261)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecccc
Confidence 799999999999999999999999999999999999999999999985 4799999999986 5778899999996
Q ss_pred ---cCcEEEEEcCC
Q 000523 1074 ---RGGQEIYVGPL 1084 (1445)
Q Consensus 1074 ---~gG~~~y~G~~ 1084 (1445)
++|+++..|+.
T Consensus 227 ~~~~~G~i~~~g~~ 240 (261)
T PRK14263 227 QGTRTGYLVEMGPT 240 (261)
T ss_pred cccCCceEEEeCCH
Confidence 46899999985
No 427
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=353.92 Aligned_cols=218 Identities=25% Similarity=0.302 Sum_probs=182.0
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-++++|+++++. ++.+|+|+||+|++||++||+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEEC
Confidence 377888887763 2469999999999999999999999999999999999875 4589999999876
Q ss_pred Ccc----cccceEEEeccCCCCCCCCCHHHHHHHHHHhc----CCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 926 KQE----TFARISGYCEQNDIHSPFVTIYESLLFSAWLR----LSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 926 ~~~----~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
... ..++.+||++|++.+++.+||+|++.++.... .....+..+.++.++++++.++|.+..+..+ +
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 431 12346999999998899999999998753211 0000122334456889999999987777663 5
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.|||||||||+||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|+++ .+.+.+|++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999878999999999986 57788999999985 79
Q ss_pred EEEEcCCC
Q 000523 1078 EIYVGPLG 1085 (1445)
Q Consensus 1078 ~~y~G~~~ 1085 (1445)
+++.|+..
T Consensus 223 i~~~g~~~ 230 (510)
T PRK09700 223 SVCSGMVS 230 (510)
T ss_pred Eeeecchh
Confidence 99999874
No 428
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=3.2e-32 Score=351.66 Aligned_cols=122 Identities=24% Similarity=0.311 Sum_probs=101.4
Q ss_pred CCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHHHHHHHHHHHHHhhCC---CEEEE
Q 000523 947 VTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELVANP---SIIFM 1022 (1445)
Q Consensus 947 lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p---~illL 1022 (1445)
+||.|++.|...+. . .....+.++.+||... .+.. ...||||||||+.||++|+.+| ++++|
T Consensus 792 ltv~E~l~~f~~~~---~------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llIL 857 (943)
T PRK00349 792 MTVEEALEFFEAIP---K------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYIL 857 (943)
T ss_pred CcHHHHHHHHHhch---h------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 78888888764432 1 1123578899999753 3443 3579999999999999999999 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe-----cCcEEEEEcCC
Q 000523 1023 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGQEIYVGPL 1084 (1445)
Q Consensus 1023 DEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~-----~gG~~~y~G~~ 1084 (1445)
||||+|||+.+...+++.|+++.++|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 858 DEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 858 DEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 9999999999999999999999888999999999985 346799999994 57999999985
No 429
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=6e-32 Score=360.82 Aligned_cols=134 Identities=22% Similarity=0.267 Sum_probs=108.0
Q ss_pred CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHHHHHHHHHHHHHh---hCCC
Q 000523 943 HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-RQSLVGLPGVSGLSTEQRKRLTIAVELV---ANPS 1018 (1445)
Q Consensus 943 ~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~LSgGqrqRl~iA~~L~---~~p~ 1018 (1445)
.+...||.|+|.++..-..+...+.++..+.+ ++++.+||.+. .+.. ...||||||||+.||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 45568999999887653221111223344455 57888999775 4554 3579999999999999998 5999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe-----cCcEEEEEcCC
Q 000523 1019 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGQEIYVGPL 1084 (1445)
Q Consensus 1019 illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~-----~gG~~~y~G~~ 1084 (1445)
+++|||||+|||+.+...+++.|+++.+.|.|||+++|++.. + +.+|++++|. .||+++..|+.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~-i-~~aDrVi~L~p~gg~~~G~iv~~Gtp 901 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHV-V-KVADYVLELGPEGGNLGGYLLASCSP 901 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEccCCCCCCCEEEEeCCH
Confidence 999999999999999999999999998889999999999863 4 8999999995 36899999986
No 430
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-33 Score=319.04 Aligned_cols=210 Identities=21% Similarity=0.348 Sum_probs=164.6
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
.+|+|+|+++++||+++|+|||||||||||++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 48999999999999999999999999999999999854 5212389999999887431 1245799999988777
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+ +||+||+.++....+.... + .....++++++.+|+.....+.. +
T Consensus 99 ~-~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKDK-Q--------------------------------VLDEAVEKSLKGASIWDEVKDRL-H 143 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCcH-H--------------------------------HHHHHHHHHHHHcCCchhHHHHH-h
Confidence 6 8999999886533221000 0 01123455677777643211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
+.++.|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++.+ + .+|+.++|+..++.+.+|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l 220 (252)
T PRK14239 144 DSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998742 3 45666788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 221 LDGDLIEYNDTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999998774
No 431
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=320.52 Aligned_cols=210 Identities=19% Similarity=0.305 Sum_probs=165.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC--CCCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
.+|+|+|++|++||+++|+|||||||||||++|+|.++| +...+|+|+++|+++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 489999999999999999999999999999999999873 212389999999987531 1235799999998777
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+. ||+||+.|..+..+.... .+....++.+++.+|+.+...... +
T Consensus 106 ~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~ 150 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKNK---------------------------------KKLQEIVEKSLKDVALWDEVKDRL-H 150 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhhh-h
Confidence 75 999999886433211000 001123456677788753211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
...+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ .+++.++|+..++.+.+|++++|
T Consensus 151 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~i~~l 227 (259)
T PRK14274 151 TQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLK--EK-YTIVIVTHNMQQAARVSDQTAFF 227 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEEcCHHHHHHhCCEEEEE
Confidence 3455799999999999999999999999999999999999999999999874 33 45566778888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|+++.+|+++++.
T Consensus 228 ~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 228 YMGELVECNDTNKMF 242 (259)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999998764
No 432
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=8e-34 Score=362.76 Aligned_cols=210 Identities=24% Similarity=0.401 Sum_probs=175.8
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCcc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 924 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1445)
..++++|+++.+. +++.+|+|+|++|+|||++||+||||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3699999986542 1236999999999999999999999999999999999987 4 48999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000523 925 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 994 (1445)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1445)
+.+ ..+++.++||+|++.++. -|++||+.++. ++.+. +.++++++..++.+. .|+.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 654 456788999999998876 59999998852 23333 335667777766543 36677765
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec
Q 000523 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
| .+||||||||++|||||+++|+||+||||||+||+.++..|++.|+++. +++|+|+++|+++ ..+.+|++++|++
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 4 5799999999999999999999999999999999999999999999885 5899999999985 5677999999985
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|+++..|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 799998874
No 433
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-33 Score=323.68 Aligned_cols=215 Identities=20% Similarity=0.270 Sum_probs=174.5
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCC--C-CeEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 922 (1445)
.+.++|+++.+. .+.+|+|+|++|++||+++|+|||||||||||++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 578899988763 2359999999999999999999999999999999999642 1 12589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 993 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1445)
.++.. ...++.++|++|++.+++. ||.||+.+....+.. .+....++.+.++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1245679999999888774 999999986543211 122233455778888888742 22332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 689999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000523 1074 RGGQEIYVGPL 1084 (1445)
Q Consensus 1074 ~gG~~~y~G~~ 1084 (1445)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 5 799999885
No 434
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=8e-34 Score=315.77 Aligned_cols=200 Identities=29% Similarity=0.459 Sum_probs=160.2
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCC--CCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHI--GEMT 242 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 242 (1445)
.++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. +.+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCCc
Confidence 35999999999999999999999999999999999999998 9999999987642 346799999987653 4489
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
|+||+.++..... . ..... ..+....++++++.+||++..++.+ .
T Consensus 87 v~e~l~~~~~~~~-~-~~~~~----------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 131 (213)
T cd03235 87 VRDVVLMGLYGHK-G-LFRRL----------------------------SKADKAKVDEALERVGLSELADRQI-----G 131 (213)
T ss_pred HHHHHHhcccccc-c-cccCC----------------------------CHHHHHHHHHHHHHcCCHHHHhCCc-----c
Confidence 9999987542110 0 00000 0001224567888999986666544 4
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1445)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.+++|++++|++|
T Consensus 132 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 132 ELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-E-GMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 6999999999999999999999999999999999999999999998764 3 455666888888999999999999886
Q ss_pred EEEec
Q 000523 403 IVYQG 407 (1445)
Q Consensus 403 iv~~G 407 (1445)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66654
No 435
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-33 Score=321.35 Aligned_cols=219 Identities=23% Similarity=0.285 Sum_probs=178.1
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC---CeEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 922 (1445)
.+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..++ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 478899988874 24699999999999999999999999999999999997652 14689999999
Q ss_pred ccCCc----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000523 923 YPKKQ----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 998 (1445)
Q Consensus 923 ~~~~~----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1445)
.++.. ...++.++|++|++.+++ .|++||+.+...... ....++.++.+.++++.+++.+..+.... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87642 234567999999988887 899999987643221 12333344456788899998653222111 12467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEE
Q 000523 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1078 (1445)
Q Consensus 999 LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~ 1078 (1445)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999986 57888999999985 799
Q ss_pred EEEcCC
Q 000523 1079 IYVGPL 1084 (1445)
Q Consensus 1079 ~y~G~~ 1084 (1445)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 999885
No 436
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-33 Score=322.00 Aligned_cols=215 Identities=20% Similarity=0.253 Sum_probs=174.3
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCC--C-CeEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 922 (1445)
-+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 478899988763 2369999999999999999999999999999999999642 1 13589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 993 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1445)
.+... ...++.++|++|++.+++. |++||+.+...... .......++.++++++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87642 1345679999999888774 99999987643221 1112223455778888888852 22322
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 689999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000523 1074 RGGQEIYVGPL 1084 (1445)
Q Consensus 1074 ~gG~~~y~G~~ 1084 (1445)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 5 799999875
No 437
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.9e-33 Score=311.18 Aligned_cols=201 Identities=23% Similarity=0.294 Sum_probs=171.5
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-+.++|+++++. ++.+|+++|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLH--VESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCeeEEECCEEc
Confidence 478889887653 2359999999999999999999999999999999999876 4589999999876
Q ss_pred CcccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000523 926 KQETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRK 1005 (1445)
Q Consensus 926 ~~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrq 1005 (1445)
.....++.++|++|++.+++.+|+.|++.+....+. .. ..+.++++++.++|.+..+.. +..|||||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTL-----VRQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCC-----hhhCCHHHHH
Confidence 543344568999999988888999999988654321 11 223467889999998776665 3579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 1006 Rl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|+++++.
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999999998888999999999987 5889999999986
No 438
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-33 Score=318.11 Aligned_cols=210 Identities=21% Similarity=0.344 Sum_probs=165.5
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
.+|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 17 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14262 17 KAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTPF 96 (250)
T ss_pred eeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCccC
Confidence 4899999999999999999999999999999999998741 01289999999887532 1245799999988777
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+ +||+||+.++....+.... ...+..+++.++.+|+....+.. .+
T Consensus 97 ~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~-~~ 141 (250)
T PRK14262 97 P-MSIYDNVAFGPRIHGVKSK---------------------------------HKLDRIVEESLKKAALWDEVKSE-LN 141 (250)
T ss_pred c-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCchhHHH-Hh
Confidence 6 8999999886532211000 00112245567777775321111 23
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
+.++.||||||||++||++|+.+|++++|||||+|||..++..+.+.|+++. .+ ++++.++|+..++.+.+|++++|
T Consensus 142 ~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tili~sH~~~~~~~~~d~i~~l 218 (250)
T PRK14262 142 KPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELS--EN-YTIVIVTHNIGQAIRIADYIAFM 218 (250)
T ss_pred CChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHh--cC-cEEEEEeCCHHHHHHhCCEEEEE
Confidence 4556799999999999999999999999999999999999999999999874 23 45666788888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|+++..|+.+++.
T Consensus 219 ~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 219 YRGELIEYGPTREIV 233 (250)
T ss_pred ECCEEEEecCHHHHH
Confidence 999999999988764
No 439
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=317.85 Aligned_cols=215 Identities=24% Similarity=0.320 Sum_probs=174.5
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC--C-eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 922 (1445)
.+.++|+++.+. .+.+|+|+|++|++||+++|+|+||||||||+++|+|..++ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 377888888763 24699999999999999999999999999999999997641 1 3589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 993 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1445)
.+... ...++.++|++|++.+++ .||+||+.+....+.. ...+..++.++++++.+++.. ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 144 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAGV--KDKELIDQRVEESLKQAAIWKETKDNLDRN--- 144 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCCcchHHHhccC---
Confidence 87532 124567999999988776 7999999876433211 122233455788899998852 22222
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. ++.+.+|++++|+
T Consensus 145 --~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 145 --AQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 467999999999999999999999999999999999999999999999854 789999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000523 1074 RGGQEIYVGPL 1084 (1445)
Q Consensus 1074 ~gG~~~y~G~~ 1084 (1445)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 5 789988875
No 440
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-33 Score=316.99 Aligned_cols=219 Identities=24% Similarity=0.306 Sum_probs=173.1
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCC--CC-eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--GG-YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~~-~~~G~i~i~g 922 (1445)
-+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 367888887763 2469999999999999999999999999999999999743 11 2479999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.+... ...++.++|++|++.+++ .|++||+.+....+.. ...+..++.+.+.++.+++.......... .+.
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~~ 147 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLHE-SAL 147 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHhc-Ccc
Confidence 87631 234567999999988887 6999999886543321 11222234566778888764211111111 246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. .+.+.+|++++|++ |+
T Consensus 148 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14255 148 SLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFLT-GN 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 589999999986 57788999999985 79
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14255 225 LIEFADT 231 (252)
T ss_pred EEEeCCH
Confidence 9998875
No 441
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=321.79 Aligned_cols=206 Identities=21% Similarity=0.313 Sum_probs=162.7
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC-----CCCCceeEEEEcCccCCCc-----CccceEEEEcCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1445)
.+|+|+|++|++|++++|+|||||||||||++|+|.++ |+ +|+|.++|.++... ..++.++|++|++
T Consensus 27 ~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~---~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 103 (269)
T PRK14259 27 EAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSL---KGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQP 103 (269)
T ss_pred EEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCC---ceEEEECCEEcccccCCHHHHhhceEEEccCC
Confidence 48999999999999999999999999999999999987 45 99999999886421 1235699999998
Q ss_pred CCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccc
Q 000523 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1445)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1445)
.+++ .||+||+.+++...+.. + + ....++.+++.+++....+..
T Consensus 104 ~l~~-~tv~enl~~~~~~~~~~---~---~-----------------------------~~~~~~~~l~~~~l~~~l~~~ 147 (269)
T PRK14259 104 NPFP-KSIYENIAFGARINGYT---G---D-----------------------------MDELVERSLRKAAVWDECKDK 147 (269)
T ss_pred ccch-hhHHHHHhhhhhhcCCc---H---H-----------------------------HHHHHHHHHHHhCCcchhhhh
Confidence 7777 59999999875432210 0 0 011234456666653211111
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
-+..+..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.++||++
T Consensus 148 -~~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~i 223 (269)
T PRK14259 148 -LNESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELK--KN-FTIVIVTHNMQQAVRVSDMT 223 (269)
T ss_pred -hCCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCEE
Confidence 123455799999999999999999999999999999999999999999999874 23 55666888889999999999
Q ss_pred EEecC-----------CeEEEecChhHHHH
Q 000523 396 ILLSD-----------GQIVYQGPRELVLE 414 (1445)
Q Consensus 396 ilL~~-----------G~iv~~G~~~~~~~ 414 (1445)
++|++ |++++.|+.+++.+
T Consensus 224 ~~l~~~~~~~~~~g~~g~~~~~~~~~~~~~ 253 (269)
T PRK14259 224 AFFNAEEVEGGSGGKVGYLVEFNETKKIFN 253 (269)
T ss_pred EEEeccccccccccccceEEEeCCHHHHHh
Confidence 99996 67899999988753
No 442
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=322.64 Aligned_cols=218 Identities=22% Similarity=0.396 Sum_probs=174.4
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|+++.+. +++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 578889887763 12469999999999999999999999999999999999876 4589999999876
Q ss_pred CcccccceEEEeccCCCCC--CCCCHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000523 926 KQETFARISGYCEQNDIHS--PFVTIYESLLFSAWLRLS-PEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTE 1002 (1445)
Q Consensus 926 ~~~~~~~~~gyv~Q~d~~~--~~lTv~E~l~f~~~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgG 1002 (1445)
.....++.++|++|++.+. ...+++|++.++...... ........++.++++++.++|.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4322234689999997642 234788888654211000 01111223445778999999988777653 569999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1003 qrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999986 577889999766 4 7999999
Q ss_pred CCC
Q 000523 1083 PLG 1085 (1445)
Q Consensus 1083 ~~~ 1085 (1445)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 864
No 443
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.2e-33 Score=309.91 Aligned_cols=199 Identities=23% Similarity=0.294 Sum_probs=164.1
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 45677776653 2469999999999999999999999999999999999876 45899999998754
Q ss_pred c--ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000523 927 Q--ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQR 1004 (1445)
Q Consensus 927 ~--~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqr 1004 (1445)
. ..+++.++|++|++.+++.+|+.|++.+....+. . ..++.++++++.++|.+..++. +..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHH
Confidence 2 2345678999999988899999999988654321 1 1234578899999998776665 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEE
Q 000523 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1072 (1445)
Q Consensus 1005 qRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l 1072 (1445)
||++||++|+++|++++|||||+|||+.++..+++.|+++.++|+|||+++|+++ .+-..-+|++++
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999999999999999999999999998777899999999986 344433455544
No 444
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=9.6e-34 Score=361.52 Aligned_cols=259 Identities=24% Similarity=0.387 Sum_probs=190.9
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCCCCC-cceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGIDLP-KVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLR 156 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~ 156 (1445)
.++.+...+|+.+.++.+++. ....+....+.+ ...++++||++.++..
T Consensus 301 ~~~~~~~~~ri~~~l~~~~~~-----~~~~~~~~~~~~~~~~i~~~~v~f~y~~~------------------------- 350 (576)
T TIGR02204 301 LQRAAGAAERLIELLQAEPDI-----KAPAHPKTLPVPLRGEIEFEQVNFAYPAR------------------------- 350 (576)
T ss_pred HHHHHHHHHHHHHHhCCCCcC-----CCCCCCccCCcCCCceEEEEEEEEECCCC-------------------------
Confidence 456777888888777654330 000000011112 2359999999997420
Q ss_pred hcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcC
Q 000523 157 IIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQ 233 (1445)
Q Consensus 157 ~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q 233 (1445)
..+.+|+|+|++++|||.++|+||||||||||+++|+|.++|+ +|+|.+||.++++..+ ++.++||+|
T Consensus 351 ------~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~~~Q 421 (576)
T TIGR02204 351 ------PDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQ---SGRILLDGVDLRQLDPAELRARMALVPQ 421 (576)
T ss_pred ------CCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHHhceEEcc
Confidence 1134999999999999999999999999999999999999998 9999999999877654 367999999
Q ss_pred CCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccc
Q 000523 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1445)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1445)
++. +++.|++|||.++... ...+.+.++++. .+ ..+.++ .+++..|
T Consensus 422 ~~~-lf~~Ti~~Ni~~~~~~----~~~~~~~~~l~~---~~------------------------l~~~i~--~l~~gl~ 467 (576)
T TIGR02204 422 DPV-LFAASVMENIRYGRPD----ATDEEVEAAARA---AH------------------------AHEFIS--ALPEGYD 467 (576)
T ss_pred CCc-cccccHHHHHhcCCCC----CCHHHHHHHHHH---cC------------------------cHHHHH--hCCCCCC
Confidence 765 5567999999875311 111111111111 00 111222 2566778
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcC
Q 000523 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1445)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1445)
|.+|+.+ ..||||||||+++||+++++|++++||||||+||..++..+.+.|+++. .++|+|+ ++|.. +....+|
T Consensus 468 t~i~~~g-~~LSgGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~--~~~t~Ii-itH~~-~~~~~~d 542 (576)
T TIGR02204 468 TYLGERG-VTLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLM--KGRTTLI-IAHRL-ATVLKAD 542 (576)
T ss_pred ceeCCCC-CcCCHHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-HHHHhCC
Confidence 9998764 4699999999999999999999999999999999999999999999863 3445554 55554 5567899
Q ss_pred eEEEecCCeEEEecChhHHHH
Q 000523 394 DIILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 394 ~iilL~~G~iv~~G~~~~~~~ 414 (1445)
+|++|++|+++..|+++++.+
T Consensus 543 ~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 543 RIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred EEEEEECCEEEeeecHHHHHH
Confidence 999999999999999988754
No 445
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-33 Score=316.78 Aligned_cols=210 Identities=22% Similarity=0.355 Sum_probs=163.7
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCC--CCCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDP--TLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~--~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
++|+|+|+++++||+++|+|||||||||||++|+|.+++ ....+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 489999999999999999999999999999999998763 111389999999987531 1245799999988777
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+ +||+||+.++....+.... + +....++++++.+++.+...... +
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~l~~~~-~ 141 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK-K--------------------------------KLDEIVEKSLKGAALWDEVKDRL-K 141 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH-H--------------------------------HHHHHHHHHHHHcCCchhhHHHH-h
Confidence 7 8999999986543221000 0 01123445566676642211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
+.+..||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.+.+|++++|
T Consensus 142 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~v~~l 218 (250)
T PRK14240 142 KSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK--KD-YTIVIVTHNMQQASRISDKTAFF 218 (250)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEEeCHHHHHhhCCEEEEE
Confidence 3455799999999999999999999999999999999999999999999873 34 45566788888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|++++.|+.+++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 219 LNGEIVEFGDTVDLF 233 (250)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 446
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=2.1e-33 Score=309.19 Aligned_cols=184 Identities=27% Similarity=0.337 Sum_probs=159.0
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc--ccccceEEEeccCCCCCCCCCH
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVTI 949 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv 949 (1445)
+.+|+|+|++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+|+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (201)
T cd03231 13 RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSP--PLAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTLSV 90 (201)
T ss_pred ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccccHHhhhheEEeccccccCCCcCH
Confidence 469999999999999999999999999999999999876 458999999987532 2345679999999888889999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000523 950 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1445)
Q Consensus 950 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgL 1029 (1445)
+|++.+.... . .++.++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 91 ~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~L 156 (201)
T cd03231 91 LENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRP-----VAQLSAGQQRRVALARLLLSGRPLWILDEPTTAL 156 (201)
T ss_pred HHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCC
Confidence 9999875311 1 134578899999998776665 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEE
Q 000523 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1072 (1445)
Q Consensus 1030 D~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l 1072 (1445)
|+.++..+++.|+++.++|+|+|+++|++. ++.+.+|+++++
T Consensus 157 D~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 157 DKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999998777999999999986 577788998876
No 447
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-33 Score=320.18 Aligned_cols=212 Identities=28% Similarity=0.387 Sum_probs=168.3
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC-----CCceeEEEEcCccCCCcCc---cceEEEEcCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT-----LKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNH 237 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~-----~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~ 237 (1445)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|.++..... ++.++|++|++..
T Consensus 15 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~~ 94 (272)
T PRK13547 15 AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQP 94 (272)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCCC
Confidence 4999999999999999999999999999999999999874 1137999999998754332 3468999998776
Q ss_pred CCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccc
Q 000523 238 IGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVG 317 (1445)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1445)
++.+||+||+.++...... .... .+ .+....++.+++.+||++..++.
T Consensus 95 ~~~~tv~e~l~~~~~~~~~--~~~~-------------~~---------------~~~~~~~~~~l~~~~l~~~~~~~-- 142 (272)
T PRK13547 95 AFAFSAREIVLLGRYPHAR--RAGA-------------LT---------------HRDGEIAWQALALAGATALVGRD-- 142 (272)
T ss_pred CCCCcHHHHHhhccccccc--cccc-------------CC---------------HHHHHHHHHHHHHcCcHhhhcCC--
Confidence 7779999999875311000 0000 00 00112456788899998655544
Q ss_pred ccccccCChhhhhHHHHHHHHh---------cCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhH
Q 000523 318 DEMIRGISGGQKKRVTTGEMMV---------GPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPET 388 (1445)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~aL~---------~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~ 388 (1445)
+..|||||||||+||++|+ .+|++|+|||||+|||+.++..+.+.|+++.+ ..+++|+.++|+..++
T Consensus 143 ---~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tviiisH~~~~~ 218 (272)
T PRK13547 143 ---VTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLAR-DWNLGVLAIVHDPNLA 218 (272)
T ss_pred ---cccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-hcCCEEEEEECCHHHH
Confidence 4469999999999999999 59999999999999999999999999998764 3245566678888889
Q ss_pred HhhcCeEEEecCCeEEEecChhHHH
Q 000523 389 YDLFDDIILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 389 ~~~~D~iilL~~G~iv~~G~~~~~~ 413 (1445)
.+++|++++|++|++++.|+.+++.
T Consensus 219 ~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 219 ARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHhCCEEEEEECCeEEEecCHHHHc
Confidence 8999999999999999999988763
No 448
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.7e-33 Score=349.43 Aligned_cols=220 Identities=22% Similarity=0.337 Sum_probs=180.8
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.++ ++.+|+|||+++++||++||+||||||||||+++|+|..++++.+|+|.++|.+..
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 45678877663 24699999999999999999999999999999999998753235899999998764
Q ss_pred ccc----ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCcCC
Q 000523 927 QET----FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSP-EVDSETRKMFIDEVMELVELNPLR-QSLVGLPGVSGLS 1000 (1445)
Q Consensus 927 ~~~----~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~LS 1000 (1445)
... .++.+||++|++.+++.+||.|++.+....+... ....+..++.++++++.+++.+.. +.. +..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 311 2356999999998889999999998864332111 122333455688999999997654 333 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1001 gGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
|||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. .+.+.+|++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999986 57788999999986 78999
Q ss_pred EcCCCC
Q 000523 1081 VGPLGR 1086 (1445)
Q Consensus 1081 ~G~~~~ 1086 (1445)
.|+...
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 988753
No 449
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-33 Score=318.43 Aligned_cols=207 Identities=18% Similarity=0.270 Sum_probs=162.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC-----CCCCceeEEEEcCccCCCcC-----ccceEEEEcCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHD 235 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d 235 (1445)
.+|+|+|+++++||+++|+|||||||||||++|+|..+ |+ +|+|.++|+++.... .++.++|++|++
T Consensus 35 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 111 (268)
T PRK14248 35 RAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQKP 111 (268)
T ss_pred eeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecCC
Confidence 49999999999999999999999999999999999864 46 899999999875321 235799999998
Q ss_pred CCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccc
Q 000523 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1445)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1445)
.+++. ||+||+.++.+..+... . . ..+..++..++.+++.......
T Consensus 112 ~~~~~-tv~enl~~~~~~~~~~~--~---~----------------------------~~~~~~~~~l~~~~l~~~~~~~ 157 (268)
T PRK14248 112 NPFPK-SIYNNITHALKYAGERR--K---S----------------------------VLDEIVEESLTKAALWDEVKDR 157 (268)
T ss_pred ccCcc-cHHHHHHHHHHhcCCCc--H---H----------------------------HHHHHHHHHHHHcCCCcchHHH
Confidence 77774 99999987643211000 0 0 0011234456677764211111
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
-++.+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.. + ++|+.++|+..++.+.+|+|
T Consensus 158 -~~~~~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiii~tH~~~~~~~~~d~v 233 (268)
T PRK14248 158 -LHSSALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--E-YSIIIVTHNMQQALRVSDRT 233 (268)
T ss_pred -HhcCcccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--C-CEEEEEEeCHHHHHHhCCEE
Confidence 1234557999999999999999999999999999999999999999999998742 3 45666788888899999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000523 396 ILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1445)
++|++|++++.|+.+++.
T Consensus 234 ~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 234 AFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 450
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=5.4e-33 Score=319.36 Aligned_cols=224 Identities=25% Similarity=0.334 Sum_probs=178.5
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
+.++|+++.+.... ..|. ..++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 4 l~~~nl~~~~~~~~---~~~~-~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSGK-HQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---cccc-cCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 66788887763100 0000 013569999999999999999999999999999999999865 46899999998754
Q ss_pred cc------cccceEEEeccCC--CCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000523 927 QE------TFARISGYCEQND--IHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVS 997 (1445)
Q Consensus 927 ~~------~~~~~~gyv~Q~d--~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1445)
.. ..++.++|++|+. .+.+..|+.|++.+...... ..........++++++.+++. +..+.. +.
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLL--SLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhc--cCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 21 2356799999997 35677999999876532111 123334455688999999996 455554 45
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++++|++ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998764 899999999986 57778999999985 7
Q ss_pred EEEEEcCCC
Q 000523 1077 QEIYVGPLG 1085 (1445)
Q Consensus 1077 ~~~y~G~~~ 1085 (1445)
++++.|+..
T Consensus 229 ~i~~~g~~~ 237 (268)
T PRK10419 229 QIVETQPVG 237 (268)
T ss_pred EEeeeCChh
Confidence 999999864
No 451
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-33 Score=319.02 Aligned_cols=219 Identities=19% Similarity=0.224 Sum_probs=174.6
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITIS 921 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~ 921 (1445)
.-+.++|+++.+. ++.+|+|+|+.|++||+++|+|+||||||||+++|+|..... +.+|+|.++
T Consensus 19 ~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (274)
T PRK14265 19 SVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYR 85 (274)
T ss_pred ceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEEC
Confidence 3588999988763 246999999999999999999999999999999999975321 247999999
Q ss_pred CccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000523 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGV 996 (1445)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1445)
|.++.. ..+++.++|++|+..+++. ||.||+.+....+. .. ...++.++++++.+++.......... .+
T Consensus 86 g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~-~~ 159 (274)
T PRK14265 86 DRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YK-GNLDELVEDSLRRAAIWEEVKDKLKE-KG 159 (274)
T ss_pred CEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---ch-HHHHHHHHHHHHHcccchhhHHHhcC-Cc
Confidence 987532 2345679999999887764 99999987643321 11 12234466778888874221111111 14
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe---
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK--- 1073 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~--- 1073 (1445)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|+
T Consensus 160 ~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~~~ 237 (274)
T PRK14265 160 TALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFNTEI 237 (274)
T ss_pred ccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 67999999999999999999999999999999999999999999999865 789999999986 5888999999997
Q ss_pred -----cCcEEEEEcCC
Q 000523 1074 -----RGGQEIYVGPL 1084 (1445)
Q Consensus 1074 -----~gG~~~y~G~~ 1084 (1445)
+.|++++.|+.
T Consensus 238 ~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 238 DEYGKRRGKLVEFSPT 253 (274)
T ss_pred ccccccCceEEEeCCH
Confidence 25899999996
No 452
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=5.4e-33 Score=311.02 Aligned_cols=192 Identities=27% Similarity=0.352 Sum_probs=159.6
Q ss_pred CceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCcccccceEEEeccCCCCCCCCCH
Q 000523 870 DKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTI 949 (1445)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~Q~d~~~~~lTv 949 (1445)
+++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+||
T Consensus 33 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~tv 101 (224)
T cd03220 33 GEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELTG 101 (224)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCcH
Confidence 34679999999999999999999999999999999999876 468999999976421 1112334567999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000523 950 YESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1445)
Q Consensus 950 ~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgL 1029 (1445)
+||+.+....+. ....+.++.++++++.+++.+..++.+ ..||||||||++|||+|+.+|++|+|||||+||
T Consensus 102 ~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~gL 173 (224)
T cd03220 102 RENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAVG 173 (224)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999988654321 223344456788999999988777653 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEc
Q 000523 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVG 1082 (1445)
Q Consensus 1030 D~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G 1082 (1445)
|+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 174 D~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 174 DAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999998777899999999986 57778999999985 7887765
No 453
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.2e-33 Score=317.53 Aligned_cols=205 Identities=27% Similarity=0.426 Sum_probs=158.1
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1445)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++ ..|
T Consensus 16 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~-~~t 91 (237)
T cd03252 16 VILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLF-NRS 91 (237)
T ss_pred cceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhc-cch
Confidence 4899999999999999999999999999999999999998 9999999988754322 35799999987665 579
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHc--CCcccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL--GLDVCADTMVGDEM 320 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~~ 320 (1445)
|+||+.+... . ...+...+..+ . ...+..++.+ |++...+ +.
T Consensus 92 v~~nl~~~~~--~--~~~~~~~~~~~---~------------------------~~~~~~l~~l~~~~~~~~~-----~~ 135 (237)
T cd03252 92 IRDNIALADP--G--MSMERVIEAAK---L------------------------AGAHDFISELPEGYDTIVG-----EQ 135 (237)
T ss_pred HHHHhhccCC--C--CCHHHHHHHHH---H------------------------cCcHHHHHhCcccccchhh-----cC
Confidence 9999987431 1 01111111000 0 0112334444 4433222 34
Q ss_pred cccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecC
Q 000523 321 IRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1445)
Q Consensus 321 ~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~ 400 (1445)
+..|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. .+. +|+.++|+..++ ..+|++++|++
T Consensus 136 ~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~~-tiii~sH~~~~~-~~~d~v~~l~~ 211 (237)
T cd03252 136 GAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC--AGR-TVIIIAHRLSTV-KNADRIIVMEK 211 (237)
T ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc--CCC-EEEEEeCCHHHH-HhCCEEEEEEC
Confidence 55799999999999999999999999999999999999999999999874 344 455567777777 46999999999
Q ss_pred CeEEEecChhHHHH
Q 000523 401 GQIVYQGPRELVLE 414 (1445)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1445)
|++++.|+.+++.+
T Consensus 212 G~i~~~~~~~~~~~ 225 (237)
T cd03252 212 GRIVEQGSHDELLA 225 (237)
T ss_pred CEEEEEcCHHHHHh
Confidence 99999999887654
No 454
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.1e-33 Score=281.12 Aligned_cols=201 Identities=28% Similarity=0.403 Sum_probs=170.9
Q ss_pred ccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc-------cceEEEEcC
Q 000523 161 KKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP-------QRTAAYISQ 233 (1445)
Q Consensus 161 ~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~-------~~~~~yv~Q 233 (1445)
...+.+||++|++.|++||.++|+|||||||||||-+|+|+-+|+ +|+|.+.|+++..+.. .+.+|+|+|
T Consensus 19 ~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQ 95 (228)
T COG4181 19 GEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVFQ 95 (228)
T ss_pred CCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEEE
Confidence 445678999999999999999999999999999999999999999 9999999999876542 368999999
Q ss_pred CCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccc
Q 000523 234 HDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCAD 313 (1445)
Q Consensus 234 ~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1445)
...++|+||..||+.....++|-+.+ +....+...|+.+||.+..+
T Consensus 96 SF~Lip~ltAlENV~lPleL~ge~~~----------------------------------~~~~~A~~lL~~vGLg~Rl~ 141 (228)
T COG4181 96 SFHLIPNLTALENVALPLELRGESSA----------------------------------DSRAGAKALLEAVGLGKRLT 141 (228)
T ss_pred eeeccccchhhhhccchhhhcCCccc----------------------------------cHHHHHHHHHHHhCcccccc
Confidence 99999999999999998877653211 01123456788999988766
Q ss_pred ccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcC
Q 000523 314 TMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFD 393 (1445)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D 393 (1445)
.+ +.+|||||+|||+||||+...|+|||-||||-.||..|..+|.+.|-.+.+ ..+++++.++|+ +....-||
T Consensus 142 Hy-----P~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnr-e~G~TlVlVTHD-~~LA~Rc~ 214 (228)
T COG4181 142 HY-----PAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNR-ERGTTLVLVTHD-PQLAARCD 214 (228)
T ss_pred cC-----ccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhh-hcCceEEEEeCC-HHHHHhhh
Confidence 44 456999999999999999999999999999999999999999999987765 456666667776 46677899
Q ss_pred eEEEecCCeEEE
Q 000523 394 DIILLSDGQIVY 405 (1445)
Q Consensus 394 ~iilL~~G~iv~ 405 (1445)
|++-|.+|+++.
T Consensus 215 R~~r~~~G~l~~ 226 (228)
T COG4181 215 RQLRLRSGRLVE 226 (228)
T ss_pred heeeeecceecc
Confidence 999999999974
No 455
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.3e-33 Score=320.58 Aligned_cols=213 Identities=23% Similarity=0.282 Sum_probs=173.8
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC---CeEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG---GYITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~---~~~~G~i~i~g 922 (1445)
.++++|+++.+. ++.+|+|+|+.|++||+++|+||||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 478899988763 24699999999999999999999999999999999998642 13589999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGL 993 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1445)
.+... ...++.++|++|++.+++. ||.||+.+....+. ... ..++.++++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2345679999999887775 99999988654332 112 23456788999998853 22332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEe-EE
Q 000523 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF-LM 1072 (1445)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~-~l 1072 (1445)
+..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++++ ++|||+++|++. .+.+.+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 467999999999999999999999999999999999999999999999976 489999999986 5777899976 45
Q ss_pred ecCcEEEEEcCC
Q 000523 1073 KRGGQEIYVGPL 1084 (1445)
Q Consensus 1073 ~~gG~~~y~G~~ 1084 (1445)
+ .|+++..|+.
T Consensus 254 ~-~G~i~~~g~~ 264 (285)
T PRK14254 254 T-GGELVEFDDT 264 (285)
T ss_pred e-CCEEEEeCCH
Confidence 6 4899998875
No 456
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.2e-33 Score=349.85 Aligned_cols=211 Identities=21% Similarity=0.308 Sum_probs=180.4
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-++++|+++.++ ++.+|+|+|++|++||++||+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 378899988773 2369999999999999999999999999999999999875 4589999999875
Q ss_pred Ccc---c-ccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 926 KQE---T-FARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 926 ~~~---~-~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
... . .++.+||++|++.+++.+||+|++.+... . ....++.++++++.++|.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 431 1 12458999999999999999999987531 1 1223456789999999987777653 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+.+|++++|++ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999878999999999986 47788999999986 799999
Q ss_pred cCCC
Q 000523 1082 GPLG 1085 (1445)
Q Consensus 1082 G~~~ 1085 (1445)
|+..
T Consensus 222 g~~~ 225 (510)
T PRK15439 222 GKTA 225 (510)
T ss_pred cChH
Confidence 9864
No 457
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-33 Score=316.14 Aligned_cols=207 Identities=23% Similarity=0.330 Sum_probs=164.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
++|+|+|+++++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (252)
T PRK14272 18 QAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNPF 97 (252)
T ss_pred EeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCccC
Confidence 49999999999999999999999999999999999987631 1379999999887531 1235799999999889
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc----ccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD----VCADT 314 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1445)
+.+|+.||+.++....+... .+. ....++..++.+++. +..+
T Consensus 98 ~~~t~~enl~~~~~~~~~~~-~~~--------------------------------~~~~~~~~l~~~~l~~~l~~~~~- 143 (252)
T PRK14272 98 PTMSVFDNVVAGLKLAGIRD-RDH--------------------------------LMEVAERSLRGAALWDEVKDRLK- 143 (252)
T ss_pred cCCCHHHHHHHHHHhcCCCC-HHH--------------------------------HHHHHHHHHHHcCcchhhhhhhc-
Confidence 99999999987643221100 000 011233344555543 2223
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
..++.||||||||++||++|+.+|++|+|||||+|||..++..+.+.|+++. .+ ++++.++|+..++.+.+|+
T Consensus 144 ----~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~ 216 (252)
T PRK14272 144 ----TPATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLK--KV-TTIIIVTHNMHQAARVSDT 216 (252)
T ss_pred ----CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCE
Confidence 3345699999999999999999999999999999999999999999999874 33 5566678888899999999
Q ss_pred EEEecCCeEEEecChhHHH
Q 000523 395 IILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1445)
+++|++|++++.|+++++.
T Consensus 217 i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 217 TSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988774
No 458
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-33 Score=318.95 Aligned_cols=210 Identities=25% Similarity=0.330 Sum_probs=167.1
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCcC----ccceEEEEcCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEFV----PQRTAAYISQHDNHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~~----~~~~~~yv~Q~d~~~~ 239 (1445)
++|+|+|+++++||+++|+|||||||||||++|+|.++|. ...+|+|.++|+++.+.. .++.++|++|++.+++
T Consensus 35 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~~ 114 (276)
T PRK14271 35 TVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPFP 114 (276)
T ss_pred EEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccCC
Confidence 4899999999999999999999999999999999999851 012899999998875431 2467999999887777
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
+||+||+.++...... ... .+....+..+++.+||.+..++.. ++
T Consensus 115 -~tv~eni~~~~~~~~~-~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~~ 159 (276)
T PRK14271 115 -MSIMDNVLAGVRAHKL-VPR--------------------------------KEFRGVAQARLTEVGLWDAVKDRL-SD 159 (276)
T ss_pred -ccHHHHHHHHHHhccC-CCH--------------------------------HHHHHHHHHHHHHcCCCchhhhHh-hC
Confidence 8999999876432110 000 001123455677888865332222 23
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
.++.||||||||++|||+|+.+|++++|||||+|||..++..+.+.|+++.. + .+|+.++|+..++.+.+|++++|+
T Consensus 160 ~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l~ 236 (276)
T PRK14271 160 SPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALFF 236 (276)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 4567999999999999999999999999999999999999999999998743 3 566667888899999999999999
Q ss_pred CCeEEEecChhHHH
Q 000523 400 DGQIVYQGPRELVL 413 (1445)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1445)
+|++++.|+.+++.
T Consensus 237 ~G~i~~~g~~~~~~ 250 (276)
T PRK14271 237 DGRLVEEGPTEQLF 250 (276)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999998874
No 459
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.1e-31 Score=348.38 Aligned_cols=213 Identities=27% Similarity=0.411 Sum_probs=177.4
Q ss_pred CceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCc
Q 000523 844 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 923 (1445)
Q Consensus 844 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 923 (1445)
+..++++|++|+++. +++.+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.
T Consensus 453 ~~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~--p~~G~I~idg~ 519 (694)
T TIGR01846 453 RGAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYT--PQHGQVLVDGV 519 (694)
T ss_pred CCeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCE
Confidence 346999999998852 12459999999999999999999999999999999999876 45899999999
Q ss_pred cCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccC
Q 000523 924 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGL 993 (1445)
Q Consensus 924 ~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~ 993 (1445)
++++ ..+++.++||+|++.+++ .|++||+.++. ++.+. +.++++++..++.+. .|+.+|.
T Consensus 520 ~i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~-----~~~~~----~~i~~a~~~~~l~~~i~~lp~gl~t~i~~ 589 (694)
T TIGR01846 520 DLAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN-----PGAPF----EHVIHAAKLAGAHDFISELPQGYNTEVGE 589 (694)
T ss_pred ehhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC-----CCCCH----HHHHHHHHHcChHHHHHhCcCccCcEecC
Confidence 8654 456788999999988776 69999997631 22222 235566777666543 3556665
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
. ..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ....+|++++|+
T Consensus 590 ~-g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~ 665 (694)
T TIGR01846 590 K-GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLE 665 (694)
T ss_pred C-CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEe
Confidence 4 46899999999999999999999999999999999999999999999984 5899999999986 456799999998
Q ss_pred cCcEEEEEcCC
Q 000523 1074 RGGQEIYVGPL 1084 (1445)
Q Consensus 1074 ~gG~~~y~G~~ 1084 (1445)
+ |+++..|+.
T Consensus 666 ~-G~i~~~g~~ 675 (694)
T TIGR01846 666 K-GQIAESGRH 675 (694)
T ss_pred C-CEEEEeCCH
Confidence 6 899999985
No 460
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=5.4e-33 Score=303.99 Aligned_cols=170 Identities=41% Similarity=0.673 Sum_probs=147.6
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCC--CCCCCceeEEEEcCccCCCcCccceEEEEcCCCCCCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKL--DPTLKVSGTVTYNGHDMDEFVPQRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~--~~~~~~~G~V~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1445)
.++|+|+|+++++|++++|+||||||||||+++|+|.+ +|+ +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 35999999999999999999999999999999999999 888 9999999998765334567999999988889999
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
++||+.+..++ .
T Consensus 99 ~~~~i~~~~~~--------------------------------------------------------------------~ 110 (194)
T cd03213 99 VRETLMFAAKL--------------------------------------------------------------------R 110 (194)
T ss_pred HHHHHHHHHHh--------------------------------------------------------------------c
Confidence 99999763210 0
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCc-hhHHhhcCeEEEecCC
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPA-PETYDLFDDIILLSDG 401 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~-~~~~~~~D~iilL~~G 401 (1445)
.||||||||++||++|+.+|++++|||||+|||..++..+.+.|+++.. .+.|+|+ ++|+. .++.+.+|++++|++|
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii-~sh~~~~~~~~~~d~v~~l~~G 188 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLAD-TGRTIIC-SIHQPSSEIFELFDKLLLLSQG 188 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEE-EecCchHHHHHhcCEEEEEeCC
Confidence 4999999999999999999999999999999999999999999998754 3445555 55655 4788899999999999
Q ss_pred eEEEec
Q 000523 402 QIVYQG 407 (1445)
Q Consensus 402 ~iv~~G 407 (1445)
++++.|
T Consensus 189 ~i~~~~ 194 (194)
T cd03213 189 RVIYFG 194 (194)
T ss_pred EEEecC
Confidence 998765
No 461
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-33 Score=319.42 Aligned_cols=218 Identities=22% Similarity=0.232 Sum_probs=173.0
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCC--C-CeEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKT--G-GYITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~--~-~~~~G~i~i~g 922 (1445)
-+.++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 488999988763 1358999999999999999999999999999999999754 1 13689999999
Q ss_pred ccCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000523 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLVGLPGV 996 (1445)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 996 (1445)
.+... ..+++.++|++|++.+++ .|++||+.+....+. ..+.+..++.+.++++.+++.. +.+.+ .. .+
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~-~~-~~ 165 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRL-HD-NA 165 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHH-hc-Cc
Confidence 87632 234567999999988877 599999988654321 1112222345667777775432 21111 11 24
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ .+.+.+|++++|++ |
T Consensus 166 ~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~~-G 242 (271)
T PRK14238 166 YGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFLN-G 242 (271)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-C
Confidence 67999999999999999999999999999999999999999999999865 799999999986 47788999999985 7
Q ss_pred EEEEEcCC
Q 000523 1077 QEIYVGPL 1084 (1445)
Q Consensus 1077 ~~~y~G~~ 1084 (1445)
++++.|+.
T Consensus 243 ~i~~~g~~ 250 (271)
T PRK14238 243 YVNEYDDT 250 (271)
T ss_pred EEEEeCCH
Confidence 99999875
No 462
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.1e-33 Score=319.83 Aligned_cols=209 Identities=28% Similarity=0.427 Sum_probs=161.3
Q ss_pred EEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc
Q 000523 848 TFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ 927 (1445)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1445)
+++|+++.++. .++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 68 (237)
T cd03252 2 TFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLAL 68 (237)
T ss_pred EEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHh
Confidence 46677766531 12358999999999999999999999999999999999875 458999999987532
Q ss_pred ---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc-------ccCCCCC
Q 000523 928 ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSL-------VGLPGVS 997 (1445)
Q Consensus 928 ---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~-------vg~~~~~ 997 (1445)
..+++.++|++|++.+++ .||.||+.+... ..... .+.+.++..++.+..+.+ .. ..+.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~----~~~~~~~~~~~~~~l~~l~~~~~~~~~-~~~~ 137 (237)
T cd03252 69 ADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSME----RVIEAAKLAGAHDFISELPEGYDTIVG-EQGA 137 (237)
T ss_pred cCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHH----HHHHHHHHcCcHHHHHhCcccccchhh-cCCC
Confidence 234567999999987764 699999976421 11111 122233333332221111 11 1246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ |+|||+++|++.. + +.+|++++|++ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~~-~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA-GRTVIIIAHRLST-V-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEeCCHHH-H-HhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999864 8999999999863 4 56999999985 79
Q ss_pred EEEEcCC
Q 000523 1078 EIYVGPL 1084 (1445)
Q Consensus 1078 ~~y~G~~ 1084 (1445)
+++.|+.
T Consensus 214 i~~~~~~ 220 (237)
T cd03252 214 IVEQGSH 220 (237)
T ss_pred EEEEcCH
Confidence 9999885
No 463
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-33 Score=318.66 Aligned_cols=210 Identities=21% Similarity=0.319 Sum_probs=164.8
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCC--CCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPT--LKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~--~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
++|+|+|+++++|++++|+||||||||||+++|+|.+++. ...+|+|.++|.++... ..++.++|++|++.++
T Consensus 39 ~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 118 (272)
T PRK14236 39 QALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAELRRRVGMVFQRPNPF 118 (272)
T ss_pred eEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHHHhccEEEEecCCccC
Confidence 4899999999999999999999999999999999998740 01289999999987531 1246799999988777
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+. ||+||+.+.....+.... + .....++++++.+++.....+.. +
T Consensus 119 ~~-tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 163 (272)
T PRK14236 119 PK-SIYENVVYGLRLQGINNR-R--------------------------------VLDEAVERSLRGAALWDEVKDRL-H 163 (272)
T ss_pred cc-cHHHHHHHHHHhcCCCcH-H--------------------------------HHHHHHHHHHHHcCCChhHHHHh-h
Confidence 75 999999886543221000 0 00122455677777753211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
+..+.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.. + .+++.++|+..++.+.+|++++|
T Consensus 164 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tiiivtH~~~~~~~~~d~i~~l 240 (272)
T PRK14236 164 ENAFGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS--K-YTIVIVTHNMQQAARVSDYTAFM 240 (272)
T ss_pred CCcccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--C-CeEEEEeCCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 45566788888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|++++.|+.+++.
T Consensus 241 ~~G~i~~~g~~~~~~ 255 (272)
T PRK14236 241 YMGKLVEYGDTDTLF 255 (272)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999988763
No 464
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=7e-34 Score=358.80 Aligned_cols=226 Identities=25% Similarity=0.385 Sum_probs=169.6
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhh--cCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDR--VGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYL 155 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~ 155 (1445)
.++.+...+|+.++++.+++ ..+.... ........+++|+||++.++.
T Consensus 297 ~~~~~~~~~ri~~~l~~~~~-----~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~------------------------- 346 (529)
T TIGR02868 297 LTRVRAAAERIEEVTGAKGP-----RPEGVVPAAGALGLGKPTLELRDLSFGYPG------------------------- 346 (529)
T ss_pred HHHHHHHHHHHHHHhcCCCC-----cCCCCCCCCcccCCCCceEEEEEEEEecCC-------------------------
Confidence 56778888999888876554 1110000 001112357999999999832
Q ss_pred hhcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEc
Q 000523 156 RIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYIS 232 (1445)
Q Consensus 156 ~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~ 232 (1445)
+ .++|+|+|++++|||.++|+||||||||||+|+|+|.++|+ +|+|.+||.++++. . ++.++||+
T Consensus 347 -----~---~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~---~G~I~i~g~~i~~~-~~~lr~~i~~V~ 414 (529)
T TIGR02868 347 -----S---PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPL---QGEVTLDGVSVSSL-QDELRRRISVFA 414 (529)
T ss_pred -----C---CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEhhhH-HHHHHhheEEEc
Confidence 1 13899999999999999999999999999999999999999 99999999998877 5 36899999
Q ss_pred CCCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccc
Q 000523 233 QHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCA 312 (1445)
Q Consensus 233 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1445)
|++.+| +.||+|||.++.. ....+.+.++++.. + .++. +-.|+++.
T Consensus 415 Q~~~lF-~~TI~eNI~~g~~----~~~~e~i~~al~~a---~------------------------l~~~--i~~lp~Gl 460 (529)
T TIGR02868 415 QDAHLF-DTTVRDNLRLGRP----DATDEELWAALERV---G------------------------LADW--LRSLPDGL 460 (529)
T ss_pred cCcccc-cccHHHHHhccCC----CCCHHHHHHHHHHc---C------------------------CHHH--HHhCcccc
Confidence 977555 5699999998631 11122222222111 0 0111 23478889
Q ss_pred cccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEec
Q 000523 313 DTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQ 383 (1445)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q 383 (1445)
||.||+++. .||||||||++||||++++|++|+||||||+||+.++..|.+.|++.. .++|+|+ ++|
T Consensus 461 dT~ige~G~-~LSGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~--~~~TvIi-ItH 527 (529)
T TIGR02868 461 DTVLGEGGA-RLSGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAAL--SGKTVVV-ITH 527 (529)
T ss_pred cchhccccC-cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhc--CCCEEEE-Eec
Confidence 999998765 599999999999999999999999999999999999999999998742 3455555 444
No 465
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.3e-33 Score=389.52 Aligned_cols=257 Identities=17% Similarity=0.223 Sum_probs=195.8
Q ss_pred hHhhHHHHHHhhhccccchHHHHHHHHHHHhhcCC--C-CCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhh
Q 000523 78 LQERQRLIDKLVKVTDVDNERFLLKLKNRIDRVGI--D-LPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNY 154 (1445)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~ 154 (1445)
.+....++||+.+..+.++|. ....+.... . .+..+|+|+||++.|...
T Consensus 1246 ~e~~~~s~eRi~~~~~~~~e~-----~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~----------------------- 1297 (1522)
T TIGR00957 1246 METNIVAVERLKEYSETEKEA-----PWQIQETAPPSGWPPRGRVEFRNYCLRYRED----------------------- 1297 (1522)
T ss_pred HHHHHHHHHHHHHHhcCCCCc-----cccccCCCCCCCCCCCCcEEEEEEEEEeCCC-----------------------
Confidence 567888999999998766551 100010011 1 134679999999998421
Q ss_pred hhhcCCccccceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEE
Q 000523 155 LRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYI 231 (1445)
Q Consensus 155 ~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv 231 (1445)
..++|+|||++|+|||.++|+|++|||||||+++|.|+++|+ +|+|.+||.|+++... ++.++||
T Consensus 1298 ---------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~---~G~I~IdG~dI~~i~~~~LR~~i~iV 1365 (1522)
T TIGR00957 1298 ---------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESA---EGEIIIDGLNIAKIGLHDLRFKITII 1365 (1522)
T ss_pred ---------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCC---CCeEEECCEEccccCHHHHHhcCeEE
Confidence 114999999999999999999999999999999999999998 9999999999988764 5789999
Q ss_pred cCCCCCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccc
Q 000523 232 SQHDNHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVC 311 (1445)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1445)
||++.+|. .||||||..... ...+.+.++.+. ++. ++. +-.|+++
T Consensus 1366 pQdp~LF~-gTIr~NLdp~~~-----~sdeei~~al~~---a~l------------------------~~~--I~~lp~G 1410 (1522)
T TIGR00957 1366 PQDPVLFS-GSLRMNLDPFSQ-----YSDEEVWWALEL---AHL------------------------KTF--VSALPDK 1410 (1522)
T ss_pred CCCCcccC-ccHHHHcCcccC-----CCHHHHHHHHHH---cCc------------------------HHH--HhhCccC
Confidence 99877665 599999973111 111222222111 110 111 1235678
Q ss_pred ccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhh
Q 000523 312 ADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDL 391 (1445)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1445)
.||.||+.+. +||||||||++|||||+++|+||+||||||+||+.|...|.+.|++.. .++| ++++.|.. ++...
T Consensus 1411 Ldt~v~e~G~-~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~--~~~T-vI~IAHRl-~ti~~ 1485 (1522)
T TIGR00957 1411 LDHECAEGGE-NLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF--EDCT-VLTIAHRL-NTIMD 1485 (1522)
T ss_pred CCceecCCCC-cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc--CCCE-EEEEecCH-HHHHh
Confidence 8999998654 699999999999999999999999999999999999999999998742 3344 45566654 56667
Q ss_pred cCeEEEecCCeEEEecChhHHHH
Q 000523 392 FDDIILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 392 ~D~iilL~~G~iv~~G~~~~~~~ 414 (1445)
+|+|++|++|+|+++|+++++++
T Consensus 1486 ~DrIlVld~G~IvE~G~~~eLl~ 1508 (1522)
T TIGR00957 1486 YTRVIVLDKGEVAEFGAPSNLLQ 1508 (1522)
T ss_pred CCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999999999875
No 466
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-33 Score=347.96 Aligned_cols=217 Identities=27% Similarity=0.329 Sum_probs=180.2
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEC
Confidence 377888887763 2469999999999999999999999999999999999875 4589999999875
Q ss_pred Cc----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000523 926 KQ----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 926 ~~----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSg 1001 (1445)
.. ..+++.+||++|++.+++.+||.||+.+....+........+.++.++++++.++|.+..+.. +..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCH
Confidence 42 123567999999998899999999998853211111122334455688999999998766654 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYV 1081 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~ 1081 (1445)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999986 57788999999986 788876
Q ss_pred cCC
Q 000523 1082 GPL 1084 (1445)
Q Consensus 1082 G~~ 1084 (1445)
++.
T Consensus 222 ~~~ 224 (501)
T PRK11288 222 FDD 224 (501)
T ss_pred cCc
Confidence 653
No 467
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-32 Score=314.70 Aligned_cols=210 Identities=19% Similarity=0.265 Sum_probs=164.7
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
.+|+|+|++|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 97 (251)
T PRK14249 18 QVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPNPF 97 (251)
T ss_pred eEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCccC
Confidence 49999999999999999999999999999999999998751 1259999999887432 1246799999998877
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+. ||+||+.++....+.... + +....++.+++.+||.+..... .+
T Consensus 98 ~~-tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~l~~~-~~ 142 (251)
T PRK14249 98 PK-SIFDNVAFGPRMLGTTAQ-S--------------------------------RLDEVVEKSLRQAALWDEVKDN-LH 142 (251)
T ss_pred cC-cHHHHHhhHHHhcCCChh-h--------------------------------HHHHHHHHHHHHhCCchhhhhH-hh
Confidence 75 999999987543221000 0 0011234455566654321111 13
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
+....|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++ + . +.+|+.++|+..++.+.+|++++|
T Consensus 143 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~-~~tilivsh~~~~~~~~~d~i~~l 219 (251)
T PRK14249 143 KSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQEL-K-Q-NYTIAIVTHNMQQAARASDWTGFL 219 (251)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHH-h-c-CCEEEEEeCCHHHHHhhCCEEEEE
Confidence 445679999999999999999999999999999999999999999999986 3 3 356666888889999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|++++.|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 220 LTGDLVEYGRTGEIF 234 (251)
T ss_pred eCCeEEEeCCHHHHH
Confidence 999999999988764
No 468
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-33 Score=315.63 Aligned_cols=210 Identities=20% Similarity=0.330 Sum_probs=163.8
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
++|+|+|+++++||+++|+||||||||||+++|+|.++ |+...+|+|.++|.++... ..++.++|++|++.++
T Consensus 18 ~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (251)
T PRK14251 18 EALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELRKEVGMVFQQPTPF 97 (251)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhhccEEEEecCCccC
Confidence 49999999999999999999999999999999999986 2111289999999887431 1245799999988777
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+ .||+||+.++....+.... + .....++++++.++|........ +
T Consensus 98 ~-~tv~enl~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 142 (251)
T PRK14251 98 P-FSVYDNVAYGLKIAGVKDK-----E----------------------------LIDQRVEESLKQAAIWKETKDNL-D 142 (251)
T ss_pred C-CcHHHHHHHHHHHcCCCCH-----H----------------------------HHHHHHHHHHHHcCCCcchHHHh-c
Confidence 5 7999999876432211000 0 00123455677778742111111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
+....||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.+.+|+|++|
T Consensus 143 ~~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiiiisH~~~~~~~~~d~i~~l 219 (251)
T PRK14251 143 RNAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELK--HQ-YTFIMVTHNLQQAGRISDQTAFL 219 (251)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHH--cC-CeEEEEECCHHHHHhhcCEEEEE
Confidence 3456799999999999999999999999999999999999999999999874 23 55666788888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|+++..|+.+++.
T Consensus 220 ~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 220 MNGDLIEAGPTEEMF 234 (251)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 469
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-33 Score=315.88 Aligned_cols=209 Identities=22% Similarity=0.326 Sum_probs=163.3
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEEcCccCCC-c---CccceEEEEcCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDE-F---VPQRTAAYISQHDNHIG 239 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~-~---~~~~~~~yv~Q~d~~~~ 239 (1445)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+. ..+|+|.++|.++.. . ..++.++|++|++.+++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~ 96 (249)
T PRK14253 17 QALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNPFP 96 (249)
T ss_pred eeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCcCc
Confidence 48999999999999999999999999999999999987520 128999999988742 1 12457999999987777
Q ss_pred CCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccccccc
Q 000523 240 EMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDE 319 (1445)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1445)
.||+||+.++....+.... + .....+++.++.+|+.+...... +.
T Consensus 97 -~tv~~~l~~~~~~~~~~~~-----~----------------------------~~~~~~~~~~~~~~l~~~~~~~~-~~ 141 (249)
T PRK14253 97 -MSIYENVAYGLRAQGIKDK-----K----------------------------VLDEVVERSLRGAALWDEVKDRL-KS 141 (249)
T ss_pred -ccHHHHHHhHHHhcCCCch-----H----------------------------HHHHHHHHHHHHcCCchhhhHHh-hc
Confidence 8999999886432211000 0 00122344566667643221111 23
Q ss_pred ccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec
Q 000523 320 MIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1445)
Q Consensus 320 ~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~ 399 (1445)
....|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+..++.+.+|++++|+
T Consensus 142 ~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~~~d~i~~l~ 218 (249)
T PRK14253 142 HAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARRISDRTAFFL 218 (249)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHHhCCEEEEEE
Confidence 4557999999999999999999999999999999999999999999998743 3 456667888889999999999999
Q ss_pred CCeEEEecChhHH
Q 000523 400 DGQIVYQGPRELV 412 (1445)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1445)
+|++++.|+.+++
T Consensus 219 ~G~i~~~g~~~~~ 231 (249)
T PRK14253 219 MGELVEHDDTQVI 231 (249)
T ss_pred CCEEEEeCCHHHH
Confidence 9999999998765
No 470
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-33 Score=319.96 Aligned_cols=207 Identities=21% Similarity=0.339 Sum_probs=162.9
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC-----CCCCceeEEEEcCccCCCc-----CccceEEEEcCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1445)
.+|+|+|++|++|++++|+|||||||||||++|+|..+ |+ +|+|.++|.++... ..++.++|++|++
T Consensus 53 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~---~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~ 129 (286)
T PRK14275 53 EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHT---TGALMFDGEDIYGKFTDEVLLRKKIGMVFQKP 129 (286)
T ss_pred EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCC---ceEEEECCEEhhhcccchHHhhhcEEEECCCC
Confidence 38999999999999999999999999999999999864 36 99999999887432 1245799999998
Q ss_pred CCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccc
Q 000523 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1445)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1445)
.+++ .||+||+.++.+..+.... ......++++++.+|+.......
T Consensus 130 ~l~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~ 175 (286)
T PRK14275 130 NPFP-KSIFDNIAYGPRLHGINDK---------------------------------KQLEEIVEKSLRKAALWDEVSDR 175 (286)
T ss_pred CCCc-cCHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHhCCccchhhH
Confidence 7776 4999999986543211000 00112244556677763211000
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
-++.+..|||||||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++.. + .+|+.++|+..++.+++|++
T Consensus 176 -~~~~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~--~-~tvIivsH~~~~~~~~~d~i 251 (286)
T PRK14275 176 -LDKNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG--S-YTIMIVTHNMQQASRVSDYT 251 (286)
T ss_pred -hhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCCEE
Confidence 1234557999999999999999999999999999999999999999999998742 3 55666888888999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000523 396 ILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1445)
++|++|++++.|+.+++.
T Consensus 252 ~~L~~G~i~~~g~~~~~~ 269 (286)
T PRK14275 252 MFFYEGVLVEHAPTAQLF 269 (286)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 471
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.2e-32 Score=314.48 Aligned_cols=220 Identities=24% Similarity=0.306 Sum_probs=174.7
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++|+++.++ ++.+|+|||+++++||++||+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 377888887763 2369999999999999999999999999999999999621124689999999876
Q ss_pred Ccc---cccc-eEEEeccCCCCCCCCCHHHHHHHHHHhcCC----CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000523 926 KQE---TFAR-ISGYCEQNDIHSPFVTIYESLLFSAWLRLS----PEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGV 996 (1445)
Q Consensus 926 ~~~---~~~~-~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~----~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 996 (1445)
... ...+ .++|++|++.+++.+|+.|++.+....... .+....+..+.++++++.+++. +..+..++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 2222 478999999999999999998775432110 1111222345578889999986 34444421
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHh-hceEeEEecC
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRG 1075 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~-fD~v~~l~~g 1075 (1445)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|+++. +... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~-~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL-LDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHhhhCCEEEEEeC-
Confidence 2599999999999999999999999999999999999999999999998779999999999863 5454 799999985
Q ss_pred cEEEEEcCC
Q 000523 1076 GQEIYVGPL 1084 (1445)
Q Consensus 1076 G~~~y~G~~ 1084 (1445)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 899999986
No 472
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-33 Score=315.19 Aligned_cols=211 Identities=21% Similarity=0.324 Sum_probs=165.9
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCcC-----ccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEFV-----PQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 238 (1445)
++|+|+|+++++|++++|+||||||||||+++|+|..+ |+...+|+|+++|.++.... .++.++|++|++.++
T Consensus 19 ~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 98 (251)
T PRK14244 19 QILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNPF 98 (251)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCcccc
Confidence 48999999999999999999999999999999999986 21112899999998864321 245799999988777
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+. ||+||+.++....+..... .+....++++++.+||.+...+.+ +
T Consensus 99 ~~-tv~~ni~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (251)
T PRK14244 99 PK-SIYDNVAYGPKLHGLAKNK--------------------------------KKLDEIVEKSLTSVGLWEELGDRL-K 144 (251)
T ss_pred cC-CHHHHHHHHHHhcCCCCCH--------------------------------HHHHHHHHHHHHHcCCCchhhhHh-h
Confidence 75 9999998864322110000 001123566788889865322222 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
..++.|||||||||+||++|+.+|++++|||||+|||..++..+.+.|+++. .+ .+|+.++|+..++.+.+|+|++|
T Consensus 145 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiiisH~~~~~~~~~d~i~~l 221 (251)
T PRK14244 145 DSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--KN-FTIIVVTHSMKQAKKVSDRVAFF 221 (251)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhcCEEEEE
Confidence 3456799999999999999999999999999999999999999999999863 33 55666788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|++++.|+.+++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 222 QSGRIVEYNTTQEIF 236 (251)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 473
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-33 Score=317.42 Aligned_cols=218 Identities=19% Similarity=0.240 Sum_probs=173.4
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC--C-eEEEEEEEcC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G-YITGNITISG 922 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~-~~~G~i~i~g 922 (1445)
.+.++|+++.+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 478889887763 23699999999999999999999999999999999997531 1 2589999999
Q ss_pred ccCC-----cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000523 923 YPKK-----QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVS 997 (1445)
Q Consensus 923 ~~~~-----~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1445)
.++. ...+++.++|++|++.+++ .|+.||+.+....+. .. ...++.++++++.+++.+..+..... .+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLKQ-SGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhcC-Ccc
Confidence 8753 1234567999999988777 499999988654321 11 12234566778888774321111111 246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec---
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR--- 1074 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~--- 1074 (1445)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999975 589999999986 58899999999982
Q ss_pred -----CcEEEEEcCC
Q 000523 1075 -----GGQEIYVGPL 1084 (1445)
Q Consensus 1075 -----gG~~~y~G~~ 1084 (1445)
.|+++..|+.
T Consensus 229 ~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 229 EGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccCceEEEeCCH
Confidence 4899999885
No 474
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-33 Score=315.26 Aligned_cols=210 Identities=21% Similarity=0.305 Sum_probs=164.4
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
.+|+|+|+++++||+++|+||||||||||+++|+|..++.. ..+|+|.++|+++... ..++.++|++|++.++
T Consensus 20 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 99 (253)
T PRK14261 20 HALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALRRKIGMVFQRPNPF 99 (253)
T ss_pred eeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhhceEEEEecCCccC
Confidence 48999999999999999999999999999999999876311 1389999999987543 1235699999998777
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+ .||+||+.|+.+..+.... .+....++.+++.++|.+...+.. +
T Consensus 100 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~-~ 144 (253)
T PRK14261 100 P-KSIYENVAYGPRIHGEKNK---------------------------------KTLDTIVEKSLKGAALWDEVKDRL-H 144 (253)
T ss_pred c-ccHHHHHHhhHHhcCCCCH---------------------------------HHHHHHHHHHHHHhcCchhhHHHh-h
Confidence 7 4999999987543221000 001122445566777643211111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
+..+.||||||||++|||+|+.+|++++|||||+|||..++..+.+.|+++.. + .+|+.++|+..++.+.+|++++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~--~-~tvii~sh~~~~~~~~~d~v~~l 221 (253)
T PRK14261 145 DSALSLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK--E-YTVIIVTHNMQQAARVSDYTGFM 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh--C-ceEEEEEcCHHHHHhhCCEEEEE
Confidence 34557999999999999999999999999999999999999999999998743 3 45666788888899999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|+++..|+.+++.
T Consensus 222 ~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 222 YLGKLIEFDKTTQIF 236 (253)
T ss_pred ECCEEEEcCCHHHHH
Confidence 999999999988764
No 475
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=8.7e-33 Score=315.71 Aligned_cols=214 Identities=26% Similarity=0.288 Sum_probs=172.0
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCcc--
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP-- 924 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~-- 924 (1445)
+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (253)
T TIGR02323 4 LQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSGA 68 (253)
T ss_pred EEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEeccccc
Confidence 67888887763 2358999999999999999999999999999999999876 458999999976
Q ss_pred ---CCc---c----cccceEEEeccCCC--CCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccc
Q 000523 925 ---KKQ---E----TFARISGYCEQNDI--HSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP-LRQSLV 991 (1445)
Q Consensus 925 ---~~~---~----~~~~~~gyv~Q~d~--~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~v 991 (1445)
... . ..++.++|++|++. ..+.+|+.|++.+..... .. .......+.++++++.+++.+ ..+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~- 145 (253)
T TIGR02323 69 ELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL- 145 (253)
T ss_pred ccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC-
Confidence 322 1 12346899999974 345678999987543211 11 111233456788999999963 55544
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCccHHHHHhhceEe
Q 000523 992 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1070 (1445)
Q Consensus 992 g~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~-g~tvi~~~Hqps~~i~~~fD~v~ 1070 (1445)
++.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. .+.+.+|+++
T Consensus 146 ----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~ 220 (253)
T TIGR02323 146 ----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLL 220 (253)
T ss_pred ----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEE
Confidence 4679999999999999999999999999999999999999999999998754 899999999986 5777899999
Q ss_pred EEecCcEEEEEcCC
Q 000523 1071 LMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1071 ~l~~gG~~~y~G~~ 1084 (1445)
+|++ |++++.|+.
T Consensus 221 ~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 221 VMQQ-GRVVESGLT 233 (253)
T ss_pred EEEC-CEEEEECCH
Confidence 9985 799999875
No 476
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.5e-33 Score=319.89 Aligned_cols=198 Identities=23% Similarity=0.232 Sum_probs=159.8
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1445)
.+|+|+|++|++||+++|+|||||||||||++|+|.++ + +|+|.++|.++..... ++.++||+|++.+++ .|
T Consensus 18 ~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~---~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~-~t 92 (275)
T cd03289 18 AVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-T---EGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFS-GT 92 (275)
T ss_pred cceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-C---CcEEEECCEEhhhCCHHHHhhhEEEECCCcccch-hh
Confidence 38999999999999999999999999999999999997 5 8999999998765432 467999999988776 59
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCC-------ccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL-------DVCADTM 315 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL-------~~~~dt~ 315 (1445)
|+||+..... ...+.. .+.++.+|| +...|+.
T Consensus 93 v~~nl~~~~~-----~~~~~~------------------------------------~~~l~~~gL~~~~~~~p~~l~~~ 131 (275)
T cd03289 93 FRKNLDPYGK-----WSDEEI------------------------------------WKVAEEVGLKSVIEQFPGQLDFV 131 (275)
T ss_pred HHHHhhhccC-----CCHHHH------------------------------------HHHHHHcCCHHHHHhCcccccce
Confidence 9999963211 011111 112222333 3456777
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
+++ ....||||||||++|||||+.+|++++|||||++||+.+...+.+.|++.. . +++|+.++|....+. .+|+|
T Consensus 132 ~~~-~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~--~-~~tii~isH~~~~i~-~~dri 206 (275)
T cd03289 132 LVD-GGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF--A-DCTVILSEHRIEAML-ECQRF 206 (275)
T ss_pred ecC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc--C-CCEEEEEECCHHHHH-hCCEE
Confidence 776 456799999999999999999999999999999999999999999999752 3 455666777776665 59999
Q ss_pred EEecCCeEEEecChhHHHH
Q 000523 396 ILLSDGQIVYQGPRELVLE 414 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1445)
++|++|++++.|+++++++
T Consensus 207 ~vl~~G~i~~~g~~~~l~~ 225 (275)
T cd03289 207 LVIEENKVRQYDSIQKLLN 225 (275)
T ss_pred EEecCCeEeecCCHHHHhh
Confidence 9999999999999999865
No 477
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.1e-33 Score=320.41 Aligned_cols=210 Identities=19% Similarity=0.283 Sum_probs=173.0
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.+.++|+++.++. +...+|+|||+.|++||+++|+|+||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 4778999888742 12358999999999999999999999999999999999874 379999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccC------CCC
Q 000523 926 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGL------PGV 996 (1445)
Q Consensus 926 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~------~~~ 996 (1445)
.. ...++.++||+|++.+++ .|++||+.... ... ++.++++++.++|.+..+...+. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 345677999999998887 59999995321 111 23467888899998766654321 134
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCc
Q 000523 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1076 (1445)
Q Consensus 997 ~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG 1076 (1445)
..||||||||++|||||+.+|+||+|||||+|||+.+...+++.|++.. .++|||+++|+++ .+ ..+|++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 5699999999999999999999999999999999999999999999874 4899999999985 34 45999999985 7
Q ss_pred EEEEEcCC
Q 000523 1077 QEIYVGPL 1084 (1445)
Q Consensus 1077 ~~~y~G~~ 1084 (1445)
+++++|++
T Consensus 213 ~i~~~g~~ 220 (275)
T cd03289 213 KVRQYDSI 220 (275)
T ss_pred eEeecCCH
Confidence 99999986
No 478
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=315.57 Aligned_cols=212 Identities=22% Similarity=0.289 Sum_probs=167.7
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+. ..+|+|.++|+++... ..++.++|++|+..++
T Consensus 21 ~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~l~ 100 (261)
T PRK14258 21 KILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNLNRLRRQVSMVHPKPNLF 100 (261)
T ss_pred eEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccchHHhhccEEEEecCCccC
Confidence 48999999999999999999999999999999999998741 2479999999886421 1245699999988777
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+ +|++||+.+.....+.... .+....+..+++.+++.+..+... +
T Consensus 101 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 145 (261)
T PRK14258 101 P-MSVYDNVAYGVKIVGWRPK---------------------------------LEIDDIVESALKDADLWDEIKHKI-H 145 (261)
T ss_pred c-ccHHHHHHHHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCcchhhhHh-c
Confidence 7 8999999876432211000 001123456777888754222111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
+.+..||||||||++||++|+.+|++++|||||+|||..+...+.+.|++++... +++|+.++|+..++.++||+|++|
T Consensus 146 ~~~~~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~-~~tiiivsH~~~~i~~~~d~i~~l 224 (261)
T PRK14258 146 KSALDLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRS-ELTMVIVSHNLHQVSRLSDFTAFF 224 (261)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhC-CCEEEEEECCHHHHHHhcCEEEEE
Confidence 4456799999999999999999999999999999999999999999999875433 455566788889999999999999
Q ss_pred cC-----CeEEEecChhHHH
Q 000523 399 SD-----GQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~-----G~iv~~G~~~~~~ 413 (1445)
++ |+++++|+++++.
T Consensus 225 ~~~~~~~G~i~~~~~~~~~~ 244 (261)
T PRK14258 225 KGNENRIGQLVEFGLTKKIF 244 (261)
T ss_pred ccCCCcCceEEEeCCHHHHH
Confidence 99 9999999999874
No 479
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-33 Score=309.53 Aligned_cols=192 Identities=29% Similarity=0.418 Sum_probs=160.0
Q ss_pred cceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcC-------ccceEEEEcCCCCCCCCCC
Q 000523 170 DVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFV-------PQRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 170 ~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1445)
|+|+++++ |+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999998 999999998864311 2357999999988888999
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIR 322 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1445)
++||+.+..... .. + .....++++++.+||++..+.. ++
T Consensus 92 ~~~~l~~~~~~~---~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~-----~~ 130 (214)
T cd03297 92 VRENLAFGLKRK---RN-----R----------------------------EDRISVDELLDLLGLDHLLNRY-----PA 130 (214)
T ss_pred HHHHHHHHHhhC---CH-----H----------------------------HHHHHHHHHHHHcCCHhHhhcC-----cc
Confidence 999998764211 00 0 0112356678899997655544 44
Q ss_pred cCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEecCCe
Q 000523 323 GISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1445)
Q Consensus 323 ~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~~G~ 402 (1445)
.||||||||++||++++.+|++++|||||+|||+.++..+.+.|++++. ..+++|+.++|+..++.+.+|++++|++|+
T Consensus 131 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 131 QLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKK-NLNIPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-HcCcEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998765 324556667888889999999999999999
Q ss_pred EEEec
Q 000523 403 IVYQG 407 (1445)
Q Consensus 403 iv~~G 407 (1445)
++++|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98875
No 480
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.6e-33 Score=311.35 Aligned_cols=209 Identities=22% Similarity=0.348 Sum_probs=169.2
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
-+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 478889887763 2369999999999999999999999999999999999765 4589999999865
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCH
Q 000523 926 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-PLRQSLVGLPGVSGLST 1001 (1445)
Q Consensus 926 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~LSg 1001 (1445)
.. ..+++.++|++|++.+++ .|++||+.+....+.. .. .++.++++++.+++. ...+.. +..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---QP--DPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---Ch--HHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 42 224567899999988876 5999999876443321 11 123467899999995 344544 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCccHHHHHhhceEeEEecCcEEEE
Q 000523 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIY 1080 (1445)
Q Consensus 1002 GqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~-~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y 1080 (1445)
|||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .|.|||+++|+++. + +.+|++++|++.+..+.
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~i~~l~~~~~~~~ 218 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADKVITLQPHAGEMQ 218 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCEEEEEecccchHh
Confidence 999999999999999999999999999999999999999999876 48999999999863 4 56999999964443444
Q ss_pred Ec
Q 000523 1081 VG 1082 (1445)
Q Consensus 1081 ~G 1082 (1445)
.|
T Consensus 219 ~~ 220 (225)
T PRK10247 219 EA 220 (225)
T ss_pred hh
Confidence 33
No 481
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-33 Score=347.23 Aligned_cols=206 Identities=25% Similarity=0.333 Sum_probs=173.6
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc----ccccceEEEeccCCCCCCCC
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQNDIHSPFV 947 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~Q~d~~~~~l 947 (1445)
+.+|+|||+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 469999999999999999999999999999999999875 458999999987642 12345699999998888999
Q ss_pred CHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000523 948 TIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1027 (1445)
Q Consensus 948 Tv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTs 1027 (1445)
||.|++.+..........+.++..+.++++++.+++.+..+.. +..|||||||||+||++|+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAK-----VATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCc-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 9999998753211111112333445688999999998776665 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCCCC
Q 000523 1028 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGR 1086 (1445)
Q Consensus 1028 gLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~~~ 1086 (1445)
|||+.++..+++.|+++++.|+|||+++|++. ++.+.+|++++|++ |+++..|+...
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 99999999999999999878999999999986 57788999999985 79999998643
No 482
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-33 Score=298.63 Aligned_cols=156 Identities=29% Similarity=0.450 Sum_probs=141.5
Q ss_pred EEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc--ccccceEEEeccCCCCCCCCCHH
Q 000523 873 VLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVTIY 950 (1445)
Q Consensus 873 ~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~Q~d~~~~~lTv~ 950 (1445)
.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++..|+.
T Consensus 14 ~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 91 (173)
T cd03230 14 TALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLTVR 91 (173)
T ss_pred eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccchHhhhccEEEEecCCccccCCcHH
Confidence 59999999999999999999999999999999999875 458999999987543 23456799999999888889999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000523 951 ESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1030 (1445)
Q Consensus 951 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD 1030 (1445)
|++. ||||||||++||++|+.+|++++|||||+|||
T Consensus 92 ~~~~--------------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~LD 127 (173)
T cd03230 92 ENLK--------------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSGLD 127 (173)
T ss_pred HHhh--------------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCCC
Confidence 9873 89999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecC
Q 000523 1031 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1445)
Q Consensus 1031 ~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~g 1075 (1445)
+.++..+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++|
T Consensus 128 ~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 128 PESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999877899999999986 577789999999864
No 483
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.2e-33 Score=359.15 Aligned_cols=212 Identities=29% Similarity=0.452 Sum_probs=177.8
Q ss_pred CceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCc
Q 000523 844 PHSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGY 923 (1445)
Q Consensus 844 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~ 923 (1445)
...++|+|++|.++. ++.+|+|+|++++|||++||+||||||||||++.|.|..+ +.+|+|.+||.
T Consensus 326 ~~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~--~~~G~I~idg~ 391 (567)
T COG1132 326 IGSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYD--PTSGEILIDGI 391 (567)
T ss_pred CCeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCC--CCCCeEEECCE
Confidence 456999999999862 3469999999999999999999999999999999999876 46899999998
Q ss_pred cCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-------ccccccccC
Q 000523 924 PKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELN-------PLRQSLVGL 993 (1445)
Q Consensus 924 ~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~-------~~~~~~vg~ 993 (1445)
++++ ..+++.++||+|++.++. -||+||+.++. ++.++++ ++++++..++. +-.|+.+|.
T Consensus 392 dI~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~-----~~at~ee----i~~a~k~a~~~d~I~~lp~g~dt~vge 461 (567)
T COG1132 392 DIRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR-----PDATDEE----IEEALKLANAHEFIANLPDGYDTIVGE 461 (567)
T ss_pred ehhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC-----CCCCHHH----HHHHHHHhChHHHHHhCcccccceecC
Confidence 8654 457888999999998887 89999999862 2233333 44444444332 246888884
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 994 ~~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
. ..+||||||||++||||++++|+||+||||||+||+.+...+++.++++. +++|+|+++|+++. ...+|++++|+
T Consensus 462 ~-G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRlst--i~~aD~IiVl~ 537 (567)
T COG1132 462 R-GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLST--IKNADRIIVLD 537 (567)
T ss_pred C-CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHhH--HHhCCEEEEEE
Confidence 3 46899999999999999999999999999999999999999999999876 57899999999963 45599999998
Q ss_pred cCcEEEEEcCC
Q 000523 1074 RGGQEIYVGPL 1084 (1445)
Q Consensus 1074 ~gG~~~y~G~~ 1084 (1445)
+ |+++..|..
T Consensus 538 ~-G~i~e~G~h 547 (567)
T COG1132 538 N-GRIVERGTH 547 (567)
T ss_pred C-CEEEEecCH
Confidence 6 789999985
No 484
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=4.2e-33 Score=304.23 Aligned_cols=178 Identities=26% Similarity=0.336 Sum_probs=150.2
Q ss_pred eEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc-----ccccceEEEeccCCC-CCC
Q 000523 872 LVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ-----ETFARISGYCEQNDI-HSP 945 (1445)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~Q~d~-~~~ 945 (1445)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 469999999999999999999999999999999999876 458999999987531 124567999999973 233
Q ss_pred CCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000523 946 FVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1025 (1445)
Q Consensus 946 ~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~~p~illLDEP 1025 (1445)
..||+||+.+..... ..+.++.++.++++++.++|.+..+.. +..||||||||++|||+|+.+|++|+||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERP-----THCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 579999998865432 123334445678999999998777765 357999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCcc
Q 000523 1026 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1059 (1445)
Q Consensus 1026 TsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps 1059 (1445)
|+|||+.++..+.+.|+++.++|+|||+++|++.
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999999877999999999975
No 485
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=7.2e-33 Score=314.84 Aligned_cols=197 Identities=25% Similarity=0.372 Sum_probs=167.7
Q ss_pred EeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCCc---ccccceEEEeccCCCCCCCCCHH
Q 000523 874 LLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTIY 950 (1445)
Q Consensus 874 iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~ 950 (1445)
+|+|+|+++++||+++|+|+||||||||+++|+|..+ .+|+|.++|.+... ...++.++|++|++.+++.+|+.
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999864 27999999987643 22345689999998888889999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhh-------CCCEEEEe
Q 000523 951 ESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1023 (1445)
Q Consensus 951 E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqRl~iA~~L~~-------~p~illLD 1023 (1445)
||+.+.... ........+.++++++.++|.+..+.. +..||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRS-----VNQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 112223345678999999998766665 35799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEEEEEcCC
Q 000523 1024 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPL 1084 (1445)
Q Consensus 1024 EPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~~y~G~~ 1084 (1445)
|||+|||+.++..+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999877899999999986 57889999999985 799999885
No 486
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=1.2e-32 Score=314.58 Aligned_cols=206 Identities=26% Similarity=0.379 Sum_probs=164.6
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCcc-----CCCcCc-------cceEEEEcC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHD-----MDEFVP-------QRTAAYISQ 233 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~-----~~~~~~-------~~~~~yv~Q 233 (1445)
.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.+ +..... ++.++|++|
T Consensus 17 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~q 93 (253)
T TIGR02323 17 KGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPD---HGTATYIMRSGAELELYQLSEAERRRLMRTEWGFVHQ 93 (253)
T ss_pred eEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEEecccccccccccCCHHHHHHhhhcceEEEEe
Confidence 3899999999999999999999999999999999999998 9999999976 543322 245899999
Q ss_pred CCC--CCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcc-
Q 000523 234 HDN--HIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDV- 310 (1445)
Q Consensus 234 ~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~- 310 (1445)
++. ..+..|+.||+.+....... ..+ .+....++++++.+|+.+
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~~--------------------------------~~~~~~~~~~l~~l~l~~~ 140 (253)
T TIGR02323 94 NPRDGLRMRVSAGANIGERLMAIGA-RHY--------------------------------GNIRAAAHDWLEEVEIDPT 140 (253)
T ss_pred CcccccCccccHHHHHHHHHHHhcc-cch--------------------------------HHHHHHHHHHHHHcCCChh
Confidence 864 45667999999754211000 000 001123567889999963
Q ss_pred cccccccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHh
Q 000523 311 CADTMVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYD 390 (1445)
Q Consensus 311 ~~dt~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~ 390 (1445)
..++. ++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|++... ..+.+++.++|+..++..
T Consensus 141 ~~~~~-----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~-~~~~tii~vsH~~~~~~~ 214 (253)
T TIGR02323 141 RIDDL-----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVR-DLGLAVIIVTHDLGVARL 214 (253)
T ss_pred hhhcC-----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHH
Confidence 44443 456999999999999999999999999999999999999999999998754 334555567888889999
Q ss_pred hcCeEEEecCCeEEEecChhHHH
Q 000523 391 LFDDIILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 391 ~~D~iilL~~G~iv~~G~~~~~~ 413 (1445)
.+|++++|++|++++.|+.+++.
T Consensus 215 ~~d~~~~l~~G~i~~~~~~~~~~ 237 (253)
T TIGR02323 215 LAQRLLVMQQGRVVESGLTDQVL 237 (253)
T ss_pred hcCEEEEEECCEEEEECCHHHHh
Confidence 99999999999999999988764
No 487
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-32 Score=314.48 Aligned_cols=218 Identities=22% Similarity=0.269 Sum_probs=174.8
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCC---eEEEEEEEcCc
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG---YITGNITISGY 923 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~---~~~G~i~i~g~ 923 (1445)
+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..... +.+|+|.++|.
T Consensus 4 l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~ 70 (250)
T PRK14266 4 IEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGV 70 (250)
T ss_pred EEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCE
Confidence 66788877653 246999999999999999999999999999999999974311 25899999998
Q ss_pred cCCc-----ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000523 924 PKKQ-----ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSG 998 (1445)
Q Consensus 924 ~~~~-----~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1445)
++.. ...++.++|++|++.+++. |+.||+.+...... ....+..++.+.++++.+++.+........ .+..
T Consensus 71 ~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-~~~~ 146 (250)
T PRK14266 71 DIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLDK-SALG 146 (250)
T ss_pred EcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHhC-Cccc
Confidence 7542 2345679999999888875 99999987643221 112233445678889999885432222222 2467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcEE
Q 000523 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQE 1078 (1445)
Q Consensus 999 LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~~ 1078 (1445)
||+|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 147 LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~i 223 (250)
T PRK14266 147 LSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GEI 223 (250)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-CeE
Confidence 999999999999999999999999999999999999999999999864 899999999986 58888999999985 799
Q ss_pred EEEcCC
Q 000523 1079 IYVGPL 1084 (1445)
Q Consensus 1079 ~y~G~~ 1084 (1445)
++.|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14266 224 IESGLT 229 (250)
T ss_pred EEeCCH
Confidence 999885
No 488
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1.1e-32 Score=316.93 Aligned_cols=206 Identities=25% Similarity=0.324 Sum_probs=169.0
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCC--C
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHD--N 236 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1445)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++....+ ++.++|++|++ .
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPS---QGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 45999999999999999999999999999999999999998 9999999998765432 35799999986 3
Q ss_pred CCCCCCHHHHHHHhHHhc-CCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc-ccccc
Q 000523 237 HIGEMTVRETLAFSARCQ-GVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADT 314 (1445)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1445)
+.+..|+.|++.+..... +. . ..+....++++++.+|++ ...++
T Consensus 102 ~~~~~t~~~~l~~~~~~~~~~--~--------------------------------~~~~~~~~~~~l~~~gl~~~~~~~ 147 (268)
T PRK10419 102 VNPRKTVREIIREPLRHLLSL--D--------------------------------KAERLARASEMLRAVDLDDSVLDK 147 (268)
T ss_pred cCCCCCHHHHHHHHHHhhccC--C--------------------------------HHHHHHHHHHHHHHcCCChhHhhC
Confidence 567899999997643210 00 0 001122456788899996 34444
Q ss_pred cccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCe
Q 000523 315 MVGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDD 394 (1445)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~ 394 (1445)
..+.||||||||++||++|+.+|++|+|||||+|||..++..+.+.|+++.+ ..+++++.++|+..++.+++|+
T Consensus 148 -----~~~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~-~~~~tiiivsH~~~~i~~~~d~ 221 (268)
T PRK10419 148 -----RPPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQ-QFGTACLFITHDLRLVERFCQR 221 (268)
T ss_pred -----CCccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHH-HcCcEEEEEECCHHHHHHhCCE
Confidence 3456999999999999999999999999999999999999999999998764 3345666678888899999999
Q ss_pred EEEecCCeEEEecChhHHH
Q 000523 395 IILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 395 iilL~~G~iv~~G~~~~~~ 413 (1445)
+++|++|++++.|+.+++.
T Consensus 222 i~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 222 VMVMDNGQIVETQPVGDKL 240 (268)
T ss_pred EEEEECCEEeeeCChhhcc
Confidence 9999999999999988764
No 489
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=358.36 Aligned_cols=213 Identities=23% Similarity=0.330 Sum_probs=178.6
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCcc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 924 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1445)
..++++|++|.++. .++.+|+|+|++|+|||++||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~--p~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYD--IDEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccC--CCCceEEECCEE
Confidence 46999999998842 12469999999999999999999999999999999999876 458999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000523 925 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPL-------RQSLVGLP 994 (1445)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1445)
.++ ..+++.++|+||++.+++ -|++||+.++. +.+.+. +.++++++.+++.+. .|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~~----~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYSR----EQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCCH----HHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 654 456788999999998886 69999998741 112222 346677777776543 46667764
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec
Q 000523 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
| .+||||||||++|||+|+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.||++++|++
T Consensus 478 g-~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 G-VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred C-CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 3 6799999999999999999999999999999999999999999999875 4799999999985 5778999999985
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|+++..|+.
T Consensus 554 -g~i~e~g~~ 562 (582)
T PRK11176 554 -GEIVERGTH 562 (582)
T ss_pred -CEEEEeCCH
Confidence 799999984
No 490
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-32 Score=316.03 Aligned_cols=210 Identities=21% Similarity=0.276 Sum_probs=164.2
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
++|+|+|+++++||+++|+|+|||||||||++|+|.++|+. ..+|+|.++|+++... ..++.++|++|++.++
T Consensus 21 ~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l~ 100 (259)
T PRK14260 21 KAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRININRLRRQIGMVFQRPNPF 100 (259)
T ss_pred EeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccchHhhhhheEEEecccccC
Confidence 48999999999999999999999999999999999988531 1389999999887431 1235799999998777
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+ +||+||+.++.+..+.-. + .+....++++++.+|+....... -+
T Consensus 101 ~-~tv~enl~~~~~~~~~~~-------------------~--------------~~~~~~~~~~l~~~~l~~~l~~~-~~ 145 (259)
T PRK14260 101 P-MSIYENVAYGVRISAKLP-------------------Q--------------ADLDEIVESALKGAALWQEVKDK-LN 145 (259)
T ss_pred C-ccHHHHHHHHHHHhcCCC-------------------H--------------HHHHHHHHHHHHHcCCcchhhhH-hc
Confidence 7 899999988653221000 0 00112345566777763211111 12
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
..+..|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++. .+ .+|+.++|+.+++.+.+|++++|
T Consensus 146 ~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~i~~~~d~i~~l 222 (259)
T PRK14260 146 KSALGLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLR--SE-LTIAIVTHNMQQATRVSDFTAFF 222 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCeEEEE
Confidence 3455799999999999999999999999999999999999999999999864 23 56666788899999999999999
Q ss_pred c-----CCeEEEecChhHHH
Q 000523 399 S-----DGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~-----~G~iv~~G~~~~~~ 413 (1445)
+ +|++++.|+++++.
T Consensus 223 ~~~~~~~G~i~~~~~~~~~~ 242 (259)
T PRK14260 223 STDESRIGQMVEFGVTTQIF 242 (259)
T ss_pred eccCCCCceEEEeCCHHHHh
Confidence 7 59999999998874
No 491
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-33 Score=328.56 Aligned_cols=211 Identities=24% Similarity=0.353 Sum_probs=179.2
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccC
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPK 925 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1445)
.++++|++++++.+ +.++|+|+|+++++||++||+|+||||||||++.|+|... +.+|+|.+||.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 68999999998743 3469999999999999999999999999999999999765 5689999999876
Q ss_pred Cc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCC
Q 000523 926 KQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQS-------LVGLPG 995 (1445)
Q Consensus 926 ~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~-------~vg~~~ 995 (1445)
.. ..+++.+++++|...++ .-|+++||..+ +++.++ +.++++++.+||.+.... .+|..
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF-~~Tlr~NL~lA-----~~~AsD----Eel~~aL~qvgL~~l~~~~p~gl~t~lge~- 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLF-SGTLRDNLRLA-----NPDASD----EELWAALQQVGLEKLLESAPDGLNTWLGEG- 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHH-HHHHHHHHhhc-----CCCCCH----HHHHHHHHHcCHHHHHHhChhhhhchhccC-
Confidence 43 34667789999976655 46999999874 233333 347889999999886544 35544
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecC
Q 000523 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1075 (1445)
Q Consensus 996 ~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~g 1075 (1445)
.+.||||||||++|||+|++|.++++|||||.|||+.|..+|++.|.+.++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 578999999999999999999999999999999999999999999998764 899999999986 4688999999985
Q ss_pred cEEEEEcCC
Q 000523 1076 GQEIYVGPL 1084 (1445)
Q Consensus 1076 G~~~y~G~~ 1084 (1445)
|+++..|..
T Consensus 548 Gkiie~G~~ 556 (573)
T COG4987 548 GKIIEEGTH 556 (573)
T ss_pred CeeeecCCH
Confidence 899999986
No 492
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-32 Score=313.18 Aligned_cols=216 Identities=22% Similarity=0.301 Sum_probs=174.0
Q ss_pred eeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCC--C--eEEEEEEEc
Q 000523 846 SLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTG--G--YITGNITIS 921 (1445)
Q Consensus 846 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~--~--~~~G~i~i~ 921 (1445)
.+.++++++++. ++.+|+|+|+++.+||+++|+|+||||||||+++|+|...+ | .+.|++.++
T Consensus 10 ~i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~ 76 (257)
T PRK14246 10 VFNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYF 76 (257)
T ss_pred heeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEEC
Confidence 377888887763 34699999999999999999999999999999999997642 1 123666666
Q ss_pred CccCCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccCC
Q 000523 922 GYPKKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNP----LRQSLVGLP 994 (1445)
Q Consensus 922 g~~~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~~ 994 (1445)
|.+... ...++.++|++|++.+++.+|++||+.+...... ....++.++.++++++.+++.+ ..+..
T Consensus 77 g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---- 150 (257)
T PRK14246 77 GKDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP---- 150 (257)
T ss_pred CcccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC----
Confidence 665432 2345679999999999999999999988643321 1122344456788999999864 22332
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec
Q 000523 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
+..||+|||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||+++|++. .+.+.+|++++|++
T Consensus 151 -~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~ 227 (257)
T PRK14246 151 -ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN 227 (257)
T ss_pred -cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 467999999999999999999999999999999999999999999999864 699999999986 47788999999985
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|+++..|+.
T Consensus 228 -g~i~~~g~~ 236 (257)
T PRK14246 228 -GELVEWGSS 236 (257)
T ss_pred -CEEEEECCH
Confidence 799999875
No 493
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-32 Score=312.72 Aligned_cols=210 Identities=20% Similarity=0.309 Sum_probs=161.7
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC--CCCCceeEEEEcCccCCCc-----CccceEEEEcCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD--PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHI 238 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~--~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1445)
.+|+|+|+++++||+++|+|||||||||||++|+|..+ |+...+|+|.++|.++... ..++.++|++|++.++
T Consensus 19 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 98 (252)
T PRK14255 19 EALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPNPF 98 (252)
T ss_pred eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCccC
Confidence 48999999999999999999999999999999999875 3111289999999887431 1235799999998777
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+ .||+||+.+..+..+.... +. ....+.+.++.+++........ +
T Consensus 99 ~-~tv~~nl~~~~~~~~~~~~-~~--------------------------------~~~~~~~~l~~~~l~~~i~~~~-~ 143 (252)
T PRK14255 99 P-FSIYENVIYGLRLAGVKDK-AV--------------------------------LDEAVETSLKQAAIWDEVKDHL-H 143 (252)
T ss_pred C-CcHHHHHHHHHHHcCCCCH-HH--------------------------------HHHHHHHHHHHcCCccchhhHH-h
Confidence 7 7999999886543221100 00 0012234455555532111111 2
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. + .+++.++|+..++.+.+|+|++|
T Consensus 144 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l 220 (252)
T PRK14255 144 ESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSMHQASRISDKTAFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCHHHHHHhCCEEEEE
Confidence 34457999999999999999999999999999999999999999999998743 3 45666788888999999999999
Q ss_pred cCCeEEEecChhHHH
Q 000523 399 SDGQIVYQGPRELVL 413 (1445)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1445)
++|+++..|+..++.
T Consensus 221 ~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 221 LTGNLIEFADTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999888763
No 494
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.6e-33 Score=355.82 Aligned_cols=210 Identities=22% Similarity=0.354 Sum_probs=178.5
Q ss_pred ceeEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCcc
Q 000523 845 HSLTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYP 924 (1445)
Q Consensus 845 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1445)
..++++|++|.++. ++.+|+|+|++++|||++||+|+||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~--p~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYP--LTEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCceEEECCEE
Confidence 46999999998841 1359999999999999999999999999999999999876 458999999988
Q ss_pred CCc---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000523 925 KKQ---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLR-------QSLVGLP 994 (1445)
Q Consensus 925 ~~~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 994 (1445)
+++ ..+++.++||+|++.+++. |++||+.++. +.+ ++.++++++.+|+.+.. |+.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 653 4577899999999999885 9999998852 122 23467888888877543 4556553
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEec
Q 000523 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR 1074 (1445)
Q Consensus 995 ~~~~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~ 1074 (1445)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++.+ ++|+|+++|+++ ....+|++++|++
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~ 549 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR 549 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC
Confidence 357999999999999999999999999999999999999999999998864 699999999985 5677999999985
Q ss_pred CcEEEEEcCC
Q 000523 1075 GGQEIYVGPL 1084 (1445)
Q Consensus 1075 gG~~~y~G~~ 1084 (1445)
|+++..|+.
T Consensus 550 -G~i~~~G~~ 558 (592)
T PRK10790 550 -GQAVEQGTH 558 (592)
T ss_pred -CEEEEEcCH
Confidence 899999985
No 495
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=6.5e-33 Score=310.82 Aligned_cols=198 Identities=26% Similarity=0.387 Sum_probs=159.0
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc---cceEEEEcCCCCCCCCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP---QRTAAYISQHDNHIGEMT 242 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1445)
++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+++ .|
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~l~~-~t 96 (225)
T PRK10247 21 KILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPT---SGTLLFEGEDISTLKPEIYRQQVSYCAQTPTLFG-DT 96 (225)
T ss_pred eeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CCeEEECCEEcCcCCHHHHHhccEEEeccccccc-cc
Confidence 4999999999999999999999999999999999999998 9999999988755432 357899999887776 59
Q ss_pred HHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCc-cccccccccccc
Q 000523 243 VRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLD-VCADTMVGDEMI 321 (1445)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 321 (1445)
|+||+.+.....+. .. ....++.+++.+||. ...++. +
T Consensus 97 v~enl~~~~~~~~~--~~----------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~ 135 (225)
T PRK10247 97 VYDNLIFPWQIRNQ--QP----------------------------------DPAIFLDDLERFALPDTILTKN-----I 135 (225)
T ss_pred HHHHHHhHHhhcCC--Ch----------------------------------HHHHHHHHHHHcCCChHHhcCC-----c
Confidence 99999875432110 00 011245678889995 344444 4
Q ss_pred ccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec-C
Q 000523 322 RGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS-D 400 (1445)
Q Consensus 322 ~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~-~ 400 (1445)
+.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+..+ ++|+.++|+..++. .+|++++|+ +
T Consensus 136 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvii~sh~~~~~~-~~d~i~~l~~~ 213 (225)
T PRK10247 136 AELSGGEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQN-IAVLWVTHDKDEIN-HADKVITLQPH 213 (225)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECChHHHH-hCCEEEEEecc
Confidence 56999999999999999999999999999999999999999999998765334 44555677777774 699999994 6
Q ss_pred CeEEEecChh
Q 000523 401 GQIVYQGPRE 410 (1445)
Q Consensus 401 G~iv~~G~~~ 410 (1445)
+..+.+|+++
T Consensus 214 ~~~~~~~~~~ 223 (225)
T PRK10247 214 AGEMQEARYE 223 (225)
T ss_pred cchHhhhhhc
Confidence 6677777664
No 496
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.1e-32 Score=308.21 Aligned_cols=196 Identities=28% Similarity=0.400 Sum_probs=160.3
Q ss_pred ceeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCCceeEEEEcCccCCCcCc------cceEEEEcCCCCCC
Q 000523 165 LTILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLDPTLKVSGTVTYNGHDMDEFVP------QRTAAYISQHDNHI 238 (1445)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~~~~~~~G~V~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1445)
.++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQ---EGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLL 94 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhc
Confidence 45999999999999999999999999999999999999998 9999999998754332 35799999998888
Q ss_pred CCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccc
Q 000523 239 GEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGD 318 (1445)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1445)
+.+|+.||+.++...... .. ..+....++++++.+||.+..+..+
T Consensus 95 ~~~t~~~n~~~~~~~~~~-~~--------------------------------~~~~~~~~~~~l~~~~l~~~~~~~~-- 139 (220)
T TIGR02982 95 GFLTARQNVQMALELQPN-LS--------------------------------YQEARERARAMLEAVGLGDHLDYYP-- 139 (220)
T ss_pred CCCCHHHHHHHHHHhccC-CC--------------------------------HHHHHHHHHHHHHHcCChhhhhcCh--
Confidence 889999999986532210 00 0011224567889999986666544
Q ss_pred cccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEe
Q 000523 319 EMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILL 398 (1445)
Q Consensus 319 ~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL 398 (1445)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++....+.++|+ ++|+.. ..+.+|+|++|
T Consensus 140 ---~~lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~-~sh~~~-~~~~~d~v~~l 214 (220)
T TIGR02982 140 ---HNLSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILI-VTHDNR-ILDVADRIVHM 214 (220)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEE-EeCCHH-HHhhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999876433445444 566655 56899999999
Q ss_pred cCCeE
Q 000523 399 SDGQI 403 (1445)
Q Consensus 399 ~~G~i 403 (1445)
++|++
T Consensus 215 ~~g~~ 219 (220)
T TIGR02982 215 EDGKL 219 (220)
T ss_pred ECCEE
Confidence 99986
No 497
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=317.20 Aligned_cols=232 Identities=21% Similarity=0.257 Sum_probs=177.1
Q ss_pred hhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHHHHHHHHHHHhhhhhcCCccccceeeecceeEEeCCeEEEEEcCC
Q 000523 108 DRVGIDLPKVEVRYEHLNVEAEAFLASNALPSFIKFYTNIFEDILNYLRIIPSKKRHLTILKDVSGVIKPGRLTLLLGPP 187 (1445)
Q Consensus 108 ~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~llGp~ 187 (1445)
|...+.++..-++++||++.+. .+++|+|+|+++++||+++|+|||
T Consensus 10 ~~~~~~~~~~~l~~~nl~~~~~----------------------------------~~~~l~~vs~~i~~Ge~~~IiG~n 55 (274)
T PRK14265 10 DSATINPDHSVFEVEGVKVFYG----------------------------------GFLALVDVHLKIPAKKIIAFIGPS 55 (274)
T ss_pred cccccCCCCceEEEeeEEEEeC----------------------------------CeEEEeeeeeEEcCCCEEEEECCC
Confidence 4445556666788999998762 124899999999999999999999
Q ss_pred CCCHHHHHHHHhCCCCCCC--CceeEEEEcCccCCCc-----CccceEEEEcCCCCCCCCCCHHHHHHHhHHhcCCCchh
Q 000523 188 SSGKTTLLLALAGKLDPTL--KVSGTVTYNGHDMDEF-----VPQRTAAYISQHDNHIGEMTVRETLAFSARCQGVGTRY 260 (1445)
Q Consensus 188 GsGKSTLL~~L~G~~~~~~--~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~ 260 (1445)
||||||||++|+|.+++.. ..+|+|.++|+++... ..++.++|++|+..+++ .||.||+.++....+...
T Consensus 56 GsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~~nl~~~~~~~~~~~-- 132 (274)
T PRK14265 56 GCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSVKLRRQVGMVFQRPNPFP-KSIYENIAFAPRANGYKG-- 132 (274)
T ss_pred CCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhHHHhhcEEEEccCCcccc-ccHHHHHHhHHHhcCchH--
Confidence 9999999999999986411 1289999999887431 12467999999887776 499999988643221000
Q ss_pred hhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCcccccccccccccccCChhhhhHHHHHHHHhc
Q 000523 261 EMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTMVGDEMIRGISGGQKKRVTTGEMMVG 340 (1445)
Q Consensus 261 ~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~aL~~ 340 (1445)
+ ....++..++.+++....... -+..+..|||||||||+||+||+.
T Consensus 133 ----~-----------------------------~~~~~~~~l~~~~l~~~l~~~-~~~~~~~LSgGq~qrv~LAraL~~ 178 (274)
T PRK14265 133 ----N-----------------------------LDELVEDSLRRAAIWEEVKDK-LKEKGTALSGGQQQRLCIARAIAM 178 (274)
T ss_pred ----H-----------------------------HHHHHHHHHHHcccchhhHHH-hcCCcccCCHHHHHHHHHHHHHhh
Confidence 0 001123345555553211111 123445799999999999999999
Q ss_pred CCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeEEEec---------CCeEEEecChhH
Q 000523 341 PALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDIILLS---------DGQIVYQGPREL 411 (1445)
Q Consensus 341 ~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~iilL~---------~G~iv~~G~~~~ 411 (1445)
+|++|||||||+|||..++..+.+.|+++. .+ ++|+.++|+..++.+++|++++|+ +|++++.|+.++
T Consensus 179 ~p~lllLDEPt~~LD~~~~~~l~~~L~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~~g~~~~ 255 (274)
T PRK14265 179 KPDVLLMDEPCSALDPISTRQVEELCLELK--EQ-YTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVEFSPTEQ 255 (274)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEEeCCHHH
Confidence 999999999999999999999999999874 23 566668889999999999999997 899999999988
Q ss_pred HH
Q 000523 412 VL 413 (1445)
Q Consensus 412 ~~ 413 (1445)
+.
T Consensus 256 ~~ 257 (274)
T PRK14265 256 MF 257 (274)
T ss_pred HH
Confidence 74
No 498
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=7.5e-33 Score=306.27 Aligned_cols=197 Identities=28% Similarity=0.376 Sum_probs=163.7
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|++..+. ++.+|+|+|++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 56777776652 2469999999999999999999999999999999999865 45899999998753
Q ss_pred cccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000523 927 QETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVGLPGVSGLSTEQRKR 1006 (1445)
Q Consensus 927 ~~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~LSgGqrqR 1006 (1445)
....++.++|++|++.+++..|+.|++.+....+. .. ++.++++++.++|.+..+.. .+.||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLP-----FGYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCC-----hhhcCHHHHHH
Confidence 22255678999999888889999999987543321 11 12378899999998766554 35799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEe
Q 000523 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1073 (1445)
Q Consensus 1007 l~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~ 1073 (1445)
++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. ++.+ |+++.+.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~--~~~~~~~ 199 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GLPG--ARELDLG 199 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhcc--CcEEeec
Confidence 99999999999999999999999999999999999998777999999999985 3443 8887774
No 499
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-32 Score=316.01 Aligned_cols=207 Identities=16% Similarity=0.297 Sum_probs=160.9
Q ss_pred eeeecceeEEeCCeEEEEEcCCCCCHHHHHHHHhCCCC-----CCCCceeEEEEcCccCCCc-----CccceEEEEcCCC
Q 000523 166 TILKDVSGVIKPGRLTLLLGPPSSGKTTLLLALAGKLD-----PTLKVSGTVTYNGHDMDEF-----VPQRTAAYISQHD 235 (1445)
Q Consensus 166 ~iL~~vs~~i~~G~~~~llGp~GsGKSTLL~~L~G~~~-----~~~~~~G~V~~~G~~~~~~-----~~~~~~~yv~Q~d 235 (1445)
.+|+|+|++|++|++++|+|+|||||||||++|+|.++ |+ +|+|.++|+++... ..++.++|++|++
T Consensus 38 ~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~ 114 (271)
T PRK14238 38 HALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKT---TGKILYRDQNIFDKSYSVEELRTNVGMVFQKP 114 (271)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCC---ceeEEECCEEcccccccHHHHhhhEEEEecCC
Confidence 38999999999999999999999999999999999987 45 99999999887421 1246799999988
Q ss_pred CCCCCCCHHHHHHHhHHhcCCCchhhhhHHHHHHHHHcCCCCCCCHHHHHHHHhhhhhhHhHHHHHHHHHcCCccccccc
Q 000523 236 NHIGEMTVRETLAFSARCQGVGTRYEMLTELARREKAAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLDVCADTM 315 (1445)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~pd~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1445)
.+++ .||+||+.++.+..+.... +. ....+...++.+++.......
T Consensus 115 ~~~~-~tv~eni~~~~~~~~~~~~-~~--------------------------------~~~~~~~~l~~~~~~~~l~~~ 160 (271)
T PRK14238 115 NPFP-KSIYDNVTYGPKIHGIKDK-KT--------------------------------LDEIVEKSLRGAAIWDELKDR 160 (271)
T ss_pred cccc-ccHHHHHHHHHHhcCCCcH-HH--------------------------------HHHHHHHHHHHcCCcchHHHH
Confidence 7776 5999999986543211000 00 011123344444432111111
Q ss_pred ccccccccCChhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCeEEEEEecCchhHHhhcCeE
Q 000523 316 VGDEMIRGISGGQKKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLRQNIHINSGTAVISLLQPAPETYDLFDDI 395 (1445)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~aL~~~p~vllLDEptsgLD~~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~~D~i 395 (1445)
. +..++.||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.. + .+|+.++|+..++.+.+|++
T Consensus 161 ~-~~~~~~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~i~~~~d~i 236 (271)
T PRK14238 161 L-HDNAYGLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK--D-YSIIIVTHNMQQAARISDKT 236 (271)
T ss_pred H-hcCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc--C-CEEEEEEcCHHHHHHhCCEE
Confidence 1 234557999999999999999999999999999999999999999999998742 3 55666888888999999999
Q ss_pred EEecCCeEEEecChhHHH
Q 000523 396 ILLSDGQIVYQGPRELVL 413 (1445)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1445)
++|++|++++.|+.+++.
T Consensus 237 ~~l~~G~i~~~g~~~~~~ 254 (271)
T PRK14238 237 AFFLNGYVNEYDDTDKIF 254 (271)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988763
No 500
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=4.3e-33 Score=311.57 Aligned_cols=209 Identities=26% Similarity=0.408 Sum_probs=167.2
Q ss_pred eEEecceeeeecchhhhhccccCCceEEeecceEEeeCCcEEEEEcCCCCChHHHHHhHhCCCCCCeEEEEEEEcCccCC
Q 000523 847 LTFDEVVYSVDMPEEMKVQGVLEDKLVLLNGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYITGNITISGYPKK 926 (1445)
Q Consensus 847 l~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKSTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1445)
++++|+++.+.. .++.+|+|+|++|++|++++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhH
Confidence 567777766531 12359999999999999999999999999999999999865 45899999998753
Q ss_pred c---ccccceEEEeccCCCCCCCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc------CCCCC
Q 000523 927 Q---ETFARISGYCEQNDIHSPFVTIYESLLFSAWLRLSPEVDSETRKMFIDEVMELVELNPLRQSLVG------LPGVS 997 (1445)
Q Consensus 927 ~---~~~~~~~gyv~Q~d~~~~~lTv~E~l~f~~~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg------~~~~~ 997 (1445)
. ...++.++|++|++.+++ .|+.|++.+... ... ++.++++++.+++.+..+.... .....
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 224567999999988776 699999876421 111 2235678888888776665431 11245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCccHHHHHhhceEeEEecCcE
Q 000523 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQ 1077 (1445)
Q Consensus 998 ~LSgGqrqRl~iA~~L~~~p~illLDEPTsgLD~~~~~~i~~~l~~~~~~g~tvi~~~Hqps~~i~~~fD~v~~l~~gG~ 1077 (1445)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|++.. .+.+|++++|++ |+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~~--~~~~d~v~~l~~-g~ 215 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPSL--LDLVDRIIVMDS-GR 215 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHHH--HHhCCEEEEEeC-Ce
Confidence 89999999999999999999999999999999999999999999998764 899999999863 478999999986 67
Q ss_pred EEEEc
Q 000523 1078 EIYVG 1082 (1445)
Q Consensus 1078 ~~y~G 1082 (1445)
+++.|
T Consensus 216 i~~~~ 220 (220)
T cd03245 216 IVADG 220 (220)
T ss_pred EeecC
Confidence 77654
Done!