Query 000524
Match_columns 1444
No_of_seqs 781 out of 5289
Neff 7.6
Searched_HMMs 46136
Date Mon Apr 1 17:58:45 2013
Command hhsearch -i /work/01045/syshi/lefta3m/000524.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/leftcdd/000524hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 2E-258 4E-263 2382.8 96.0 1339 36-1444 12-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 1E-239 2E-244 2381.2 141.2 1439 4-1444 4-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 8E-189 2E-193 1899.1 134.8 1290 93-1439 2-1389(1394)
4 KOG0061 Transporter, ABC super 100.0 2.1E-96 4E-101 922.3 54.9 574 844-1443 23-611 (613)
5 TIGR00955 3a01204 The Eye Pigm 100.0 3.9E-95 8E-100 922.9 58.7 563 871-1444 37-617 (617)
6 PLN03211 ABC transporter G-25; 100.0 7.7E-95 1.7E-99 917.8 60.8 580 844-1441 37-659 (659)
7 TIGR00956 3a01205 Pleiotropic 100.0 3.9E-92 8.5E-97 955.9 62.4 561 870-1441 72-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 5.7E-91 1.2E-95 938.9 57.8 590 842-1440 127-789 (1470)
9 KOG0065 Pleiotropic drug resis 100.0 7E-86 1.5E-90 827.9 38.0 563 870-1442 126-732 (1391)
10 KOG0061 Transporter, ABC super 100.0 3.1E-80 6.6E-85 776.2 57.4 583 114-775 21-608 (613)
11 TIGR00955 3a01204 The Eye Pigm 100.0 1.5E-79 3.3E-84 780.2 58.8 569 162-774 35-612 (617)
12 PLN03211 ABC transporter G-25; 100.0 3.5E-79 7.5E-84 775.0 61.7 609 114-775 35-658 (659)
13 KOG0055 Multidrug/pheromone ex 100.0 5.4E-75 1.2E-79 732.9 51.8 783 158-1084 360-1208(1228)
14 KOG0054 Multidrug resistance-a 100.0 3.1E-70 6.7E-75 707.1 52.4 772 166-1084 535-1357(1381)
15 TIGR01257 rim_protein retinal- 100.0 4.1E-68 8.8E-73 715.1 71.8 223 846-1095 1937-2161(2272)
16 PLN03130 ABC transporter C fam 100.0 1.4E-65 2.9E-70 703.2 63.5 211 845-1084 1236-1456(1622)
17 PLN03232 ABC transporter C fam 100.0 3.9E-66 8.3E-71 709.6 51.9 211 845-1084 1233-1453(1495)
18 COG1123 ATPase components of v 100.0 8.6E-65 1.9E-69 603.6 50.1 474 165-1084 22-514 (539)
19 PTZ00265 multidrug resistance 100.0 2.1E-64 4.6E-69 685.2 58.1 217 845-1084 1164-1447(1466)
20 TIGR00957 MRP_assoc_pro multi 100.0 4E-63 8.8E-68 680.7 58.1 211 845-1084 1283-1503(1522)
21 PRK10261 glutathione transport 100.0 2E-62 4.4E-67 624.1 53.4 487 165-1084 29-548 (623)
22 PRK13549 xylose transporter AT 100.0 5.5E-63 1.2E-67 618.1 47.1 460 165-1086 18-491 (506)
23 PRK10762 D-ribose transporter 100.0 1.1E-62 2.4E-67 614.7 46.1 450 165-1086 17-481 (501)
24 PRK09700 D-allose transporter 100.0 1.1E-62 2.3E-67 616.6 45.9 458 165-1084 18-493 (510)
25 PRK15134 microcin C ABC transp 100.0 5.6E-62 1.2E-66 612.3 51.0 464 165-1084 22-510 (529)
26 PTZ00243 ABC transporter; Prov 100.0 3.8E-61 8.2E-66 658.9 62.4 211 845-1084 1307-1528(1560)
27 TIGR03269 met_CoM_red_A2 methy 100.0 1.2E-61 2.7E-66 608.4 49.8 445 165-1084 13-512 (520)
28 PRK15439 autoinducer 2 ABC tra 100.0 7.2E-62 1.6E-66 607.6 47.5 453 165-1085 24-488 (510)
29 TIGR01271 CFTR_protein cystic 100.0 1.8E-60 4E-65 652.3 63.4 210 845-1084 1216-1435(1490)
30 TIGR02633 xylG D-xylose ABC tr 100.0 1.4E-61 3.1E-66 605.4 46.5 460 165-1085 14-488 (500)
31 PRK11288 araG L-arabinose tran 100.0 2.5E-61 5.4E-66 602.5 47.1 453 165-1088 17-484 (501)
32 PRK10982 galactose/methyl gala 100.0 2.3E-60 5.1E-65 592.7 46.5 450 165-1085 11-476 (491)
33 PRK10938 putative molybdenum t 100.0 3.5E-59 7.5E-64 582.5 42.3 446 166-1081 17-484 (490)
34 COG4172 ABC-type uncharacteriz 100.0 1.4E-57 3E-62 507.0 44.2 470 163-1084 21-511 (534)
35 PRK11819 putative ABC transpor 100.0 9.3E-57 2E-61 566.8 53.1 201 846-1083 324-527 (556)
36 PRK15064 ABC transporter ATP-b 100.0 1.1E-56 2.4E-61 564.4 49.4 198 846-1084 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 3.9E-56 8.4E-61 561.2 52.5 201 846-1083 322-525 (552)
38 PRK13409 putative ATPase RIL; 100.0 1.3E-54 2.9E-59 544.2 43.0 211 846-1098 340-554 (590)
39 PRK10636 putative ABC transpor 100.0 7.9E-54 1.7E-58 545.5 50.5 197 846-1084 312-512 (638)
40 PRK11147 ABC transporter ATPas 100.0 1.4E-53 3.1E-58 544.8 49.6 202 846-1084 319-523 (635)
41 COG1129 MglA ABC-type sugar tr 100.0 5.9E-53 1.3E-57 499.6 43.0 452 163-1084 19-485 (500)
42 COG0488 Uup ATPase components 100.0 3.1E-51 6.7E-56 499.5 45.2 220 164-413 15-239 (530)
43 PLN03073 ABC transporter F fam 100.0 1.5E-51 3.3E-56 524.8 43.3 200 846-1084 508-709 (718)
44 COG3845 ABC-type uncharacteriz 100.0 7.8E-49 1.7E-53 453.2 40.9 457 164-1085 16-488 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 1E-42 2.2E-47 363.3 20.6 221 163-435 13-238 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 2.5E-42 5.5E-47 360.4 22.5 214 847-1084 3-220 (240)
47 KOG0927 Predicted transporter 100.0 1.5E-41 3.3E-46 392.7 28.6 202 845-1084 388-591 (614)
48 COG1131 CcmA ABC-type multidru 100.0 4.7E-41 1E-45 388.1 25.4 223 847-1097 5-230 (293)
49 COG1135 AbcC ABC-type metal io 100.0 6.9E-41 1.5E-45 366.7 20.4 224 163-437 17-246 (339)
50 COG1135 AbcC ABC-type metal io 100.0 1.6E-40 3.5E-45 363.8 20.7 218 847-1084 2-226 (339)
51 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 4.1E-40 8.9E-45 361.2 23.6 216 846-1086 4-224 (254)
52 TIGR01257 rim_protein retinal- 100.0 1.4E-35 3.1E-40 401.2 71.9 216 845-1084 927-1144(2272)
53 COG1125 OpuBA ABC-type proline 100.0 4E-40 8.7E-45 349.5 20.5 210 164-414 13-225 (309)
54 COG1120 FepC ABC-type cobalami 100.0 5.3E-40 1.2E-44 362.4 21.6 217 847-1085 3-224 (258)
55 COG1127 Ttg2A ABC-type transpo 100.0 1E-39 2.2E-44 346.0 22.4 230 846-1099 8-249 (263)
56 COG1116 TauB ABC-type nitrate/ 100.0 1E-39 2.3E-44 352.4 22.4 204 846-1075 3-207 (248)
57 COG3839 MalK ABC-type sugar tr 100.0 5E-40 1.1E-44 376.1 20.8 217 167-434 18-235 (338)
58 COG1136 SalX ABC-type antimicr 100.0 2.5E-39 5.3E-44 350.4 23.7 193 872-1076 18-219 (226)
59 COG1131 CcmA ABC-type multidru 100.0 1.8E-39 3.9E-44 375.0 23.4 212 164-418 17-230 (293)
60 COG3842 PotA ABC-type spermidi 100.0 7.3E-40 1.6E-44 376.7 19.9 223 164-436 17-240 (352)
61 COG1118 CysA ABC-type sulfate/ 100.0 1.1E-39 2.3E-44 356.1 19.4 222 164-434 14-239 (345)
62 COG1125 OpuBA ABC-type proline 100.0 1.6E-39 3.4E-44 345.0 19.1 213 847-1084 2-220 (309)
63 COG3638 ABC-type phosphate/pho 100.0 1.7E-39 3.7E-44 343.5 19.3 220 846-1086 3-234 (258)
64 COG4555 NatA ABC-type Na+ tran 100.0 7.6E-40 1.6E-44 336.2 15.7 201 872-1084 15-217 (245)
65 COG1127 Ttg2A ABC-type transpo 100.0 3E-39 6.4E-44 342.6 20.2 211 163-414 19-235 (263)
66 COG1120 FepC ABC-type cobalami 100.0 1.4E-39 3.1E-44 359.1 18.2 211 164-413 14-227 (258)
67 COG1116 TauB ABC-type nitrate/ 100.0 6.8E-39 1.5E-43 346.1 20.1 192 165-401 16-207 (248)
68 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.2E-38 4.9E-43 347.5 22.5 207 166-414 18-227 (254)
69 COG4555 NatA ABC-type Na+ tran 100.0 6.7E-39 1.4E-43 329.2 16.6 207 164-414 14-222 (245)
70 COG1118 CysA ABC-type sulfate/ 100.0 1.1E-38 2.5E-43 348.1 18.9 205 871-1085 14-223 (345)
71 COG2884 FtsE Predicted ATPase 100.0 1.9E-38 4.2E-43 323.5 19.2 213 847-1084 2-221 (223)
72 COG3638 ABC-type phosphate/pho 100.0 1.5E-38 3.3E-43 336.3 18.7 217 163-414 15-237 (258)
73 COG1117 PstB ABC-type phosphat 100.0 1.1E-38 2.4E-43 331.0 16.9 222 164-433 19-248 (253)
74 COG1136 SalX ABC-type antimicr 100.0 3.8E-38 8.2E-43 341.2 21.9 197 164-403 17-220 (226)
75 PRK13537 nodulation ABC transp 100.0 1.2E-37 2.6E-42 363.3 27.0 214 846-1084 7-222 (306)
76 COG1117 PstB ABC-type phosphat 100.0 2.6E-38 5.6E-43 328.2 18.7 217 846-1084 7-232 (253)
77 COG3839 MalK ABC-type sugar tr 100.0 3.9E-38 8.4E-43 360.6 22.0 214 846-1084 3-218 (338)
78 TIGR02314 ABC_MetN D-methionin 100.0 3.1E-37 6.7E-42 362.4 26.3 206 165-413 18-229 (343)
79 KOG0058 Peptide exporter, ABC 100.0 9E-38 1.9E-42 376.4 20.7 213 159-414 476-691 (716)
80 TIGR02314 ABC_MetN D-methionin 100.0 5.5E-37 1.2E-41 360.3 26.6 217 847-1084 2-225 (343)
81 COG3842 PotA ABC-type spermidi 100.0 1.2E-37 2.5E-42 358.5 20.4 215 846-1084 5-221 (352)
82 cd03261 ABC_Org_Solvent_Resist 100.0 6.7E-37 1.4E-41 345.6 25.6 213 848-1084 2-221 (235)
83 PRK11650 ugpC glycerol-3-phosp 100.0 4.9E-37 1.1E-41 363.9 24.2 206 165-413 17-223 (356)
84 TIGR03265 PhnT2 putative 2-ami 100.0 1E-36 2.3E-41 360.7 26.3 214 846-1084 4-219 (353)
85 PRK11650 ugpC glycerol-3-phosp 100.0 1E-36 2.2E-41 361.1 26.2 214 847-1084 4-219 (356)
86 PRK11432 fbpC ferric transport 100.0 6.9E-37 1.5E-41 361.5 24.3 206 165-413 19-225 (351)
87 TIGR03265 PhnT2 putative 2-ami 100.0 7.4E-37 1.6E-41 361.9 24.2 207 165-414 17-224 (353)
88 COG1124 DppF ABC-type dipeptid 100.0 6E-37 1.3E-41 327.3 20.9 206 165-414 20-231 (252)
89 PRK13536 nodulation factor exp 100.0 2.4E-36 5.3E-41 355.8 28.0 215 845-1084 40-256 (340)
90 TIGR01186 proV glycine betaine 100.0 1E-36 2.2E-41 359.8 24.8 208 164-414 5-219 (363)
91 PRK11432 fbpC ferric transport 100.0 1.9E-36 4.2E-41 357.7 26.8 214 846-1084 6-221 (351)
92 TIGR03258 PhnT 2-aminoethylpho 100.0 2E-36 4.4E-41 358.5 26.4 214 846-1084 5-223 (362)
93 TIGR03258 PhnT 2-aminoethylpho 100.0 1.1E-36 2.4E-41 360.7 24.1 207 165-413 18-227 (362)
94 cd03259 ABC_Carb_Solutes_like 100.0 1.8E-36 4E-41 336.9 24.2 210 848-1082 2-213 (213)
95 PRK13537 nodulation ABC transp 100.0 2.7E-36 5.8E-41 352.0 26.2 206 165-414 20-227 (306)
96 PRK09452 potA putrescine/sperm 100.0 1.5E-36 3.3E-41 360.8 24.3 206 165-413 27-233 (375)
97 TIGR01188 drrA daunorubicin re 100.0 1.8E-36 3.9E-41 353.9 24.1 202 871-1084 5-208 (302)
98 COG3840 ThiQ ABC-type thiamine 100.0 8E-37 1.7E-41 308.6 17.7 196 877-1084 17-214 (231)
99 cd03293 ABC_NrtD_SsuB_transpor 100.0 5.3E-36 1.1E-40 334.8 26.3 215 848-1084 2-218 (220)
100 PRK10851 sulfate/thiosulfate t 100.0 3.9E-36 8.5E-41 355.8 26.3 216 847-1084 3-221 (353)
101 TIGR00960 3a0501s02 Type II (G 100.0 3.5E-36 7.6E-41 335.4 24.4 208 847-1077 2-215 (216)
102 cd03269 ABC_putative_ATPase Th 100.0 4.3E-36 9.2E-41 333.2 24.8 209 848-1082 2-210 (210)
103 KOG0058 Peptide exporter, ABC 100.0 6.4E-36 1.4E-40 360.4 27.9 215 843-1084 462-686 (716)
104 TIGR01288 nodI ATP-binding ABC 100.0 5.5E-36 1.2E-40 350.0 26.3 214 846-1084 4-219 (303)
105 cd03301 ABC_MalK_N The N-termi 100.0 6.1E-36 1.3E-40 332.8 25.3 210 848-1082 2-213 (213)
106 cd03265 ABC_DrrA DrrA is the A 100.0 6.5E-36 1.4E-40 334.1 25.4 212 848-1084 2-216 (220)
107 COG1137 YhbG ABC-type (unclass 100.0 4.3E-37 9.3E-42 315.6 14.4 205 870-1084 15-223 (243)
108 COG2884 FtsE Predicted ATPase 100.0 1.7E-36 3.8E-41 309.2 18.7 199 165-407 15-219 (223)
109 PRK09452 potA putrescine/sperm 100.0 7E-36 1.5E-40 355.1 27.0 214 846-1084 14-229 (375)
110 cd03234 ABCG_White The White s 100.0 7.3E-36 1.6E-40 335.0 25.6 221 847-1082 4-226 (226)
111 COG1122 CbiO ABC-type cobalt t 100.0 3.6E-36 7.7E-41 333.0 22.5 207 165-414 17-228 (235)
112 cd03219 ABC_Mj1267_LivG_branch 100.0 7.8E-36 1.7E-40 337.3 25.7 215 848-1084 2-227 (236)
113 COG3840 ThiQ ABC-type thiamine 100.0 1.1E-36 2.4E-41 307.5 16.6 201 170-413 17-218 (231)
114 COG1122 CbiO ABC-type cobalt t 100.0 3.1E-36 6.7E-41 333.5 21.7 214 847-1084 4-223 (235)
115 cd03261 ABC_Org_Solvent_Resist 100.0 5.2E-36 1.1E-40 338.3 24.0 207 165-413 13-225 (235)
116 PRK11153 metN DL-methionine tr 100.0 8.2E-36 1.8E-40 353.2 26.5 217 847-1084 2-225 (343)
117 COG2274 SunT ABC-type bacterio 100.0 9.5E-35 2.1E-39 365.9 37.5 217 840-1084 465-691 (709)
118 COG1124 DppF ABC-type dipeptid 100.0 3.3E-36 7.2E-41 321.6 20.5 216 847-1085 4-227 (252)
119 PRK10851 sulfate/thiosulfate t 100.0 5.1E-36 1.1E-40 354.8 24.3 210 165-413 15-225 (353)
120 COG0410 LivF ABC-type branched 100.0 3.3E-36 7.2E-41 319.6 20.3 207 164-414 15-226 (237)
121 cd03296 ABC_CysA_sulfate_impor 100.0 1.2E-35 2.7E-40 336.1 26.3 216 847-1084 3-221 (239)
122 PRK11153 metN DL-methionine tr 100.0 1E-35 2.2E-40 352.3 26.7 206 165-413 18-229 (343)
123 cd03218 ABC_YhbG The ABC trans 100.0 9.9E-36 2.2E-40 335.5 25.3 212 848-1084 2-217 (232)
124 cd03266 ABC_NatA_sodium_export 100.0 7.9E-36 1.7E-40 333.1 24.0 215 847-1082 2-218 (218)
125 TIGR01188 drrA daunorubicin re 100.0 4.7E-36 1E-40 350.4 23.2 206 165-414 6-213 (302)
126 PRK11000 maltose/maltodextrin 100.0 1.1E-35 2.4E-40 354.8 26.5 214 846-1084 3-218 (369)
127 COG2274 SunT ABC-type bacterio 100.0 3.1E-36 6.8E-41 379.3 22.9 207 166-414 487-696 (709)
128 PRK11607 potG putrescine trans 100.0 6.6E-36 1.4E-40 356.0 24.4 206 165-413 32-238 (377)
129 PRK11607 potG putrescine trans 100.0 1.7E-35 3.8E-40 352.4 27.9 214 846-1084 19-234 (377)
130 KOG0062 ATPase component of AB 100.0 1E-35 2.2E-40 342.9 24.7 205 843-1083 359-563 (582)
131 TIGR01186 proV glycine betaine 100.0 8.5E-36 1.8E-40 352.0 24.8 202 871-1084 5-214 (363)
132 TIGR03522 GldA_ABC_ATP gliding 100.0 1.2E-35 2.7E-40 346.5 25.9 212 847-1084 3-216 (301)
133 PRK09536 btuD corrinoid ABC tr 100.0 8.9E-36 1.9E-40 355.9 24.9 217 847-1085 4-224 (402)
134 cd03268 ABC_BcrA_bacitracin_re 100.0 9.4E-36 2E-40 329.9 23.3 206 848-1082 2-208 (208)
135 cd03260 ABC_PstB_phosphate_tra 100.0 1.1E-35 2.4E-40 333.9 24.0 215 848-1084 2-224 (227)
136 PRK11000 maltose/maltodextrin 100.0 9.4E-36 2E-40 355.4 24.5 206 165-413 16-222 (369)
137 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.3E-35 2.9E-40 331.2 23.8 207 848-1075 2-216 (218)
138 KOG0057 Mitochondrial Fe/S clu 100.0 4.7E-36 1E-40 349.3 20.7 229 110-414 343-574 (591)
139 cd03258 ABC_MetN_methionine_tr 100.0 1.6E-35 3.4E-40 334.1 24.4 217 847-1084 2-225 (233)
140 COG0411 LivG ABC-type branched 100.0 3E-36 6.4E-41 322.4 17.2 221 163-414 15-239 (250)
141 cd03256 ABC_PhnC_transporter A 100.0 1.4E-35 3E-40 336.4 23.8 216 848-1084 2-229 (241)
142 PRK09493 glnQ glutamine ABC tr 100.0 2.7E-35 5.8E-40 333.6 26.0 214 847-1084 2-220 (240)
143 cd03226 ABC_cobalt_CbiO_domain 100.0 1E-35 2.3E-40 328.7 21.5 192 872-1079 13-205 (205)
144 TIGR02673 FtsE cell division A 100.0 2E-35 4.4E-40 328.8 23.9 206 847-1075 2-213 (214)
145 PRK11629 lolD lipoprotein tran 100.0 4E-35 8.8E-40 330.6 26.5 216 847-1084 6-229 (233)
146 PRK11264 putative amino-acid A 100.0 3.2E-35 7E-40 335.2 25.9 214 847-1084 4-228 (250)
147 cd03263 ABC_subfamily_A The AB 100.0 2.1E-35 4.5E-40 330.2 23.8 214 847-1084 1-216 (220)
148 PRK13637 cbiO cobalt transport 100.0 2.7E-35 6E-40 341.2 25.5 218 847-1084 3-229 (287)
149 COG1137 YhbG ABC-type (unclass 100.0 1.5E-36 3.2E-41 311.6 12.9 210 163-414 15-228 (243)
150 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.6E-35 5.7E-40 338.7 24.7 203 870-1084 35-245 (269)
151 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3E-35 6.6E-40 333.5 24.8 213 848-1084 2-220 (242)
152 cd03292 ABC_FtsE_transporter F 100.0 2.8E-35 6.2E-40 327.7 23.9 206 848-1077 2-213 (214)
153 PRK13536 nodulation factor exp 100.0 2.2E-35 4.8E-40 347.6 24.1 206 165-414 54-261 (340)
154 cd03224 ABC_TM1139_LivF_branch 100.0 2.7E-35 5.8E-40 329.8 23.5 210 848-1084 2-216 (222)
155 cd03259 ABC_Carb_Solutes_like 100.0 2.3E-35 5E-40 328.1 22.3 200 165-407 13-213 (213)
156 PRK11248 tauB taurine transpor 100.0 6.3E-35 1.4E-39 332.6 26.4 212 847-1084 2-215 (255)
157 cd03258 ABC_MetN_methionine_tr 100.0 4.9E-35 1.1E-39 330.1 25.2 205 166-413 19-229 (233)
158 TIGR02315 ABC_phnC phosphonate 100.0 1.9E-35 4.2E-40 335.6 21.9 217 847-1084 2-230 (243)
159 PRK13647 cbiO cobalt transport 100.0 4.9E-35 1.1E-39 337.1 25.2 214 847-1084 5-222 (274)
160 PRK11831 putative ABC transpor 100.0 6.2E-35 1.3E-39 335.7 26.0 215 846-1084 7-228 (269)
161 cd03265 ABC_DrrA DrrA is the A 100.0 3.5E-35 7.6E-40 328.2 23.1 205 165-412 13-219 (220)
162 PRK13634 cbiO cobalt transport 100.0 4.5E-35 9.8E-40 340.0 24.7 218 847-1084 3-230 (290)
163 COG4559 ABC-type hemin transpo 100.0 1.8E-35 3.8E-40 306.4 18.7 207 165-413 14-229 (259)
164 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5E-35 1.1E-39 336.3 24.4 208 163-413 35-249 (269)
165 cd03264 ABC_drug_resistance_li 100.0 5.5E-35 1.2E-39 324.6 23.8 208 848-1082 2-211 (211)
166 PRK13631 cbiO cobalt transport 100.0 5.9E-35 1.3E-39 341.9 25.1 218 846-1084 21-260 (320)
167 PRK10908 cell division protein 100.0 8.3E-35 1.8E-39 325.7 25.2 208 847-1078 2-215 (222)
168 PRK13637 cbiO cobalt transport 100.0 5.4E-35 1.2E-39 338.8 24.3 218 165-425 20-248 (287)
169 PRK13643 cbiO cobalt transport 100.0 6.8E-35 1.5E-39 338.1 25.2 217 847-1084 2-228 (288)
170 PRK10895 lipopolysaccharide AB 100.0 6.7E-35 1.5E-39 330.6 24.6 214 847-1084 4-221 (241)
171 cd03257 ABC_NikE_OppD_transpor 100.0 6.7E-35 1.5E-39 328.0 24.3 217 847-1082 2-228 (228)
172 cd03296 ABC_CysA_sulfate_impor 100.0 5.6E-35 1.2E-39 330.7 23.7 210 165-413 15-225 (239)
173 TIGR00972 3a0107s01c2 phosphat 100.0 9.4E-35 2E-39 330.5 25.6 214 847-1084 2-227 (247)
174 PRK10619 histidine/lysine/argi 100.0 1.1E-34 2.5E-39 331.7 26.4 214 846-1084 5-236 (257)
175 cd03262 ABC_HisP_GlnQ_permease 100.0 6.3E-35 1.4E-39 324.6 23.6 206 848-1077 2-212 (213)
176 PRK13651 cobalt transporter AT 100.0 7.5E-35 1.6E-39 339.1 24.9 218 847-1084 3-249 (305)
177 PRK13636 cbiO cobalt transport 100.0 9.3E-35 2E-39 336.4 25.4 215 846-1084 5-226 (283)
178 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.5E-34 3.2E-39 326.6 26.3 212 847-1084 2-216 (236)
179 cd03235 ABC_Metallic_Cations A 100.0 4.6E-35 1E-39 325.6 21.9 199 872-1082 12-213 (213)
180 TIGR01288 nodI ATP-binding ABC 100.0 5.7E-35 1.2E-39 341.5 23.6 206 165-414 17-224 (303)
181 COG0410 LivF ABC-type branched 100.0 4.3E-35 9.3E-40 311.2 20.3 213 847-1085 4-222 (237)
182 PRK13646 cbiO cobalt transport 100.0 8.1E-35 1.8E-39 337.4 24.5 217 847-1084 3-230 (286)
183 cd03219 ABC_Mj1267_LivG_branch 100.0 6.5E-35 1.4E-39 329.8 23.2 215 165-413 13-231 (236)
184 KOG0055 Multidrug/pheromone ex 100.0 1.1E-34 2.4E-39 368.1 27.7 215 843-1084 347-571 (1228)
185 cd03301 ABC_MalK_N The N-termi 100.0 7.2E-35 1.6E-39 324.2 23.0 200 165-407 13-213 (213)
186 PRK11247 ssuB aliphatic sulfon 100.0 1E-34 2.2E-39 330.4 24.6 206 846-1084 12-218 (257)
187 TIGR02211 LolD_lipo_ex lipopro 100.0 1.3E-34 2.7E-39 324.1 25.0 211 847-1079 2-220 (221)
188 cd03293 ABC_NrtD_SsuB_transpor 100.0 8.6E-35 1.9E-39 325.1 23.5 201 165-410 17-219 (220)
189 PRK13643 cbiO cobalt transport 100.0 1.4E-34 3E-39 335.6 26.0 224 166-433 20-255 (288)
190 TIGR03740 galliderm_ABC gallid 100.0 1.8E-34 3.9E-39 323.1 26.1 208 848-1085 2-209 (223)
191 COG4559 ABC-type hemin transpo 100.0 5E-35 1.1E-39 303.0 19.5 216 847-1085 2-226 (259)
192 PRK10070 glycine betaine trans 100.0 8.9E-35 1.9E-39 347.1 24.7 207 164-413 40-253 (400)
193 PRK11629 lolD lipoprotein tran 100.0 1.8E-34 3.8E-39 325.4 25.8 201 165-409 22-229 (233)
194 TIGR03005 ectoine_ehuA ectoine 100.0 1.7E-34 3.7E-39 329.5 25.8 214 847-1084 1-231 (252)
195 PRK13650 cbiO cobalt transport 100.0 1E-34 2.2E-39 335.4 24.1 216 846-1084 4-224 (279)
196 PRK11614 livF leucine/isoleuci 100.0 1.1E-34 2.4E-39 327.9 24.0 211 847-1084 6-221 (237)
197 cd03225 ABC_cobalt_CbiO_domain 100.0 7.5E-35 1.6E-39 323.5 22.1 193 872-1075 14-210 (211)
198 PRK11300 livG leucine/isoleuci 100.0 1.4E-34 3.1E-39 330.8 25.0 218 846-1085 5-239 (255)
199 PRK14247 phosphate ABC transpo 100.0 2.2E-34 4.7E-39 328.3 26.3 216 847-1084 4-229 (250)
200 PRK13650 cbiO cobalt transport 100.0 1.8E-34 4E-39 333.2 26.0 205 165-413 20-228 (279)
201 PRK11831 putative ABC transpor 100.0 2.2E-34 4.8E-39 331.2 26.6 207 165-413 20-232 (269)
202 TIGR01978 sufC FeS assembly AT 100.0 1.8E-34 3.9E-39 327.7 25.4 219 847-1084 1-229 (243)
203 PRK14273 phosphate ABC transpo 100.0 1.9E-34 4.1E-39 329.4 25.8 215 846-1084 7-233 (254)
204 cd03218 ABC_YhbG The ABC trans 100.0 9.5E-35 2.1E-39 327.6 23.0 205 165-413 13-221 (232)
205 COG4988 CydD ABC-type transpor 100.0 6.7E-35 1.4E-39 346.2 22.5 206 166-414 335-543 (559)
206 TIGR03522 GldA_ABC_ATP gliding 100.0 9.3E-35 2E-39 339.1 23.5 205 165-414 15-221 (301)
207 PRK13634 cbiO cobalt transport 100.0 9.3E-35 2E-39 337.3 23.2 206 165-413 20-234 (290)
208 COG4152 ABC-type uncharacteriz 100.0 3.5E-35 7.5E-40 310.0 17.6 202 870-1084 13-214 (300)
209 cd03260 ABC_PstB_phosphate_tra 100.0 6.5E-35 1.4E-39 327.7 21.1 204 165-411 13-226 (227)
210 PRK13644 cbiO cobalt transport 100.0 1.4E-34 3.1E-39 333.2 24.4 213 847-1084 2-219 (274)
211 PRK14267 phosphate ABC transpo 100.0 2.1E-34 4.6E-39 329.0 25.6 220 847-1084 5-232 (253)
212 PRK11124 artP arginine transpo 100.0 2E-34 4.4E-39 326.9 25.2 213 847-1084 3-225 (242)
213 PRK15079 oligopeptide ABC tran 100.0 2.5E-34 5.4E-39 337.9 26.8 229 846-1084 8-246 (331)
214 PRK14268 phosphate ABC transpo 100.0 2.4E-34 5.2E-39 329.1 25.9 214 846-1084 12-237 (258)
215 COG0411 LivG ABC-type branched 100.0 6.5E-35 1.4E-39 312.1 19.7 206 870-1084 15-234 (250)
216 PRK11174 cysteine/glutathione 100.0 9.7E-35 2.1E-39 371.2 25.1 207 165-414 363-572 (588)
217 KOG0057 Mitochondrial Fe/S clu 100.0 4.5E-35 9.7E-40 341.1 19.9 212 843-1084 348-569 (591)
218 PRK13652 cbiO cobalt transport 100.0 2E-34 4.4E-39 332.7 25.2 214 847-1084 4-222 (277)
219 PRK13641 cbiO cobalt transport 100.0 2E-34 4.3E-39 334.3 25.2 218 847-1084 3-229 (287)
220 TIGR03415 ABC_choXWV_ATP choli 100.0 1.4E-34 3E-39 342.9 24.2 208 163-413 35-253 (382)
221 cd03233 ABC_PDR_domain1 The pl 100.0 1.5E-34 3.3E-39 318.1 22.8 180 163-407 18-202 (202)
222 PRK09473 oppD oligopeptide tra 100.0 2.6E-34 5.7E-39 337.9 26.2 214 165-414 29-251 (330)
223 cd03233 ABC_PDR_domain1 The pl 100.0 2.4E-34 5.2E-39 316.6 24.2 196 846-1082 3-202 (202)
224 cd03263 ABC_subfamily_A The AB 100.0 1E-34 2.3E-39 324.5 21.7 203 165-412 15-219 (220)
225 cd03224 ABC_TM1139_LivF_branch 100.0 1.4E-34 3E-39 324.0 22.5 203 165-413 13-220 (222)
226 cd03266 ABC_NatA_sodium_export 100.0 1.6E-34 3.4E-39 322.6 22.8 198 166-407 19-218 (218)
227 cd03256 ABC_PhnC_transporter A 100.0 1.6E-34 3.4E-39 327.7 23.2 214 165-413 14-233 (241)
228 TIGR00960 3a0501s02 Type II (G 100.0 7.7E-35 1.7E-39 324.6 20.2 195 165-403 16-216 (216)
229 PRK13548 hmuV hemin importer A 100.0 2.4E-34 5.3E-39 328.8 24.7 213 847-1084 3-225 (258)
230 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.1E-34 4.5E-39 319.9 23.4 194 877-1082 16-211 (211)
231 TIGR03411 urea_trans_UrtD urea 100.0 3.2E-34 6.9E-39 325.4 25.3 215 847-1084 3-226 (242)
232 cd03269 ABC_putative_ATPase Th 100.0 1.3E-34 2.8E-39 321.4 21.5 198 165-407 13-210 (210)
233 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2E-34 4.4E-39 326.8 23.6 206 165-413 14-224 (242)
234 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 8.2E-33 1.8E-37 358.9 41.8 209 845-1084 450-668 (686)
235 PRK14245 phosphate ABC transpo 100.0 4.3E-34 9.2E-39 325.8 26.3 219 846-1084 3-229 (250)
236 PRK13635 cbiO cobalt transport 100.0 2.4E-34 5.3E-39 332.0 24.3 214 847-1084 6-224 (279)
237 cd03232 ABC_PDR_domain2 The pl 100.0 2.5E-34 5.5E-39 313.9 23.2 190 846-1082 3-192 (192)
238 PRK14241 phosphate transporter 100.0 4.3E-34 9.2E-39 327.2 25.9 217 846-1084 4-237 (258)
239 PRK14242 phosphate transporter 100.0 4.7E-34 1E-38 326.1 26.1 220 845-1084 5-232 (253)
240 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.2E-34 2.7E-39 323.5 20.8 195 165-403 17-218 (218)
241 PRK14237 phosphate transporter 100.0 6.1E-34 1.3E-38 327.2 26.9 225 840-1084 14-246 (267)
242 cd03234 ABCG_White The White s 100.0 2.7E-34 5.8E-39 322.4 23.4 204 164-407 19-226 (226)
243 PRK13646 cbiO cobalt transport 100.0 3.5E-34 7.6E-39 332.1 25.1 205 165-413 20-234 (286)
244 cd03300 ABC_PotA_N PotA is an 100.0 4.9E-34 1.1E-38 321.4 25.6 212 848-1084 2-215 (232)
245 PRK09984 phosphonate/organopho 100.0 3.3E-34 7.1E-39 328.9 24.5 220 846-1085 4-238 (262)
246 PRK11231 fecE iron-dicitrate t 100.0 3.2E-34 7E-39 327.6 24.2 217 847-1085 3-223 (255)
247 COG4175 ProV ABC-type proline/ 100.0 6.9E-35 1.5E-39 318.1 17.6 222 164-436 40-268 (386)
248 PRK10744 pstB phosphate transp 100.0 5E-34 1.1E-38 326.9 25.7 218 843-1084 10-239 (260)
249 PRK10253 iron-enterobactin tra 100.0 3.6E-34 7.8E-39 328.9 24.4 219 845-1085 6-229 (265)
250 PRK15079 oligopeptide ABC tran 100.0 3.1E-34 6.7E-39 337.1 24.3 208 165-413 34-250 (331)
251 PRK13638 cbiO cobalt transport 100.0 3.8E-34 8.3E-39 329.7 24.6 213 847-1084 2-220 (271)
252 PRK13647 cbiO cobalt transport 100.0 3.4E-34 7.5E-39 330.1 24.1 203 166-412 19-225 (274)
253 PRK09536 btuD corrinoid ABC tr 100.0 2.2E-34 4.8E-39 343.9 23.3 209 165-413 16-227 (402)
254 TIGR02315 ABC_phnC phosphonate 100.0 1.7E-34 3.8E-39 327.8 21.3 213 165-412 15-233 (243)
255 PRK11022 dppD dipeptide transp 100.0 4.9E-34 1.1E-38 335.4 25.7 213 165-413 20-242 (326)
256 PRK10575 iron-hydroxamate tran 100.0 4.5E-34 9.8E-39 328.0 24.9 218 846-1085 11-233 (265)
257 PRK13651 cobalt transporter AT 100.0 3.5E-34 7.6E-39 333.5 24.2 205 165-413 20-253 (305)
258 cd03268 ABC_BcrA_bacitracin_re 100.0 2.2E-34 4.8E-39 319.0 21.4 195 165-407 13-208 (208)
259 TIGR02769 nickel_nikE nickel i 100.0 6.1E-34 1.3E-38 326.9 25.8 223 847-1084 3-235 (265)
260 COG0444 DppD ABC-type dipeptid 100.0 3.1E-34 6.8E-39 320.3 22.6 215 164-413 17-242 (316)
261 PRK10584 putative ABC transpor 100.0 8E-34 1.7E-38 319.1 26.1 213 846-1080 6-226 (228)
262 PRK10070 glycine betaine trans 100.0 3.8E-34 8.2E-39 341.7 24.6 202 871-1084 40-249 (400)
263 COG4988 CydD ABC-type transpor 100.0 1.4E-34 3E-39 343.5 20.5 213 843-1084 317-538 (559)
264 TIGR00968 3a0106s01 sulfate AB 100.0 7E-34 1.5E-38 321.1 25.4 212 848-1084 2-215 (237)
265 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 5E-34 1.1E-38 322.4 24.2 206 165-414 14-221 (236)
266 PRK13649 cbiO cobalt transport 100.0 5.7E-34 1.2E-38 330.0 25.3 217 847-1084 3-229 (280)
267 cd03257 ABC_NikE_OppD_transpor 100.0 6.4E-34 1.4E-38 320.0 25.0 201 166-407 19-228 (228)
268 PRK14256 phosphate ABC transpo 100.0 1.3E-33 2.8E-38 322.1 27.8 220 846-1084 4-231 (252)
269 PRK13639 cbiO cobalt transport 100.0 6.4E-34 1.4E-38 328.2 25.2 214 847-1084 2-221 (275)
270 TIGR03410 urea_trans_UrtE urea 100.0 4.4E-34 9.6E-39 321.7 23.3 210 848-1085 2-217 (230)
271 TIGR01184 ntrCD nitrate transp 100.0 3.4E-34 7.4E-39 322.0 22.3 198 875-1084 1-199 (230)
272 TIGR03873 F420-0_ABC_ATP propo 100.0 5.1E-34 1.1E-38 326.2 24.1 217 847-1085 2-222 (256)
273 PRK14235 phosphate transporter 100.0 8E-34 1.7E-38 326.2 25.8 220 846-1084 19-246 (267)
274 COG4525 TauB ABC-type taurine 100.0 2.5E-34 5.5E-39 293.2 19.0 201 872-1085 18-220 (259)
275 TIGR02211 LolD_lipo_ex lipopro 100.0 6.5E-34 1.4E-38 318.3 24.1 196 165-404 18-220 (221)
276 PRK11022 dppD dipeptide transp 100.0 1.2E-33 2.5E-38 332.2 27.3 223 847-1084 4-238 (326)
277 TIGR01277 thiQ thiamine ABC tr 100.0 7.1E-34 1.5E-38 316.0 24.0 198 874-1083 13-212 (213)
278 PRK14269 phosphate ABC transpo 100.0 8.4E-34 1.8E-38 322.4 24.9 219 847-1084 3-225 (246)
279 cd03226 ABC_cobalt_CbiO_domain 100.0 2.3E-34 5E-39 318.0 19.8 192 165-404 13-205 (205)
280 PRK13632 cbiO cobalt transport 100.0 8.4E-34 1.8E-38 326.7 25.2 215 846-1084 7-226 (271)
281 PRK09473 oppD oligopeptide tra 100.0 1.2E-33 2.6E-38 332.3 26.9 224 846-1084 12-246 (330)
282 PRK13631 cbiO cobalt transport 100.0 4.9E-34 1.1E-38 334.2 23.3 217 165-425 39-279 (320)
283 PRK00635 excinuclease ABC subu 100.0 1.6E-32 3.5E-37 366.1 40.7 134 943-1084 759-901 (1809)
284 PRK11264 putative amino-acid A 100.0 6.5E-34 1.4E-38 324.5 23.6 204 166-413 17-232 (250)
285 PRK13549 xylose transporter AT 100.0 5.9E-34 1.3E-38 356.6 25.4 220 847-1086 6-229 (506)
286 cd03267 ABC_NatA_like Similar 100.0 7.8E-34 1.7E-38 320.4 23.9 201 870-1082 32-236 (236)
287 PRK11308 dppF dipeptide transp 100.0 1.3E-33 2.8E-38 331.7 26.5 225 846-1084 5-239 (327)
288 PRK13547 hmuV hemin importer A 100.0 7.1E-34 1.5E-38 326.2 23.7 219 847-1085 2-240 (272)
289 cd03267 ABC_NatA_like Similar 100.0 8.4E-34 1.8E-38 320.1 24.0 202 163-407 32-236 (236)
290 PRK09493 glnQ glutamine ABC tr 100.0 6.8E-34 1.5E-38 322.1 23.3 205 165-413 14-224 (240)
291 PRK13648 cbiO cobalt transport 100.0 1.2E-33 2.6E-38 325.2 25.6 216 846-1085 7-227 (269)
292 TIGR03415 ABC_choXWV_ATP choli 100.0 8E-34 1.7E-38 336.5 24.7 203 870-1084 35-249 (382)
293 PRK13633 cobalt transporter AT 100.0 8.7E-34 1.9E-38 328.0 24.4 218 847-1084 5-228 (280)
294 TIGR01193 bacteriocin_ABC ABC- 100.0 2.1E-32 4.6E-37 356.4 40.2 211 845-1084 472-692 (708)
295 cd03264 ABC_drug_resistance_li 100.0 4.4E-34 9.5E-39 317.3 20.9 197 165-407 13-211 (211)
296 TIGR03608 L_ocin_972_ABC putat 100.0 7.7E-34 1.7E-38 314.2 22.8 189 872-1072 11-206 (206)
297 PRK11174 cysteine/glutathione 100.0 2E-34 4.4E-39 368.3 20.7 210 845-1084 348-567 (588)
298 PRK13640 cbiO cobalt transport 100.0 8.9E-34 1.9E-38 328.0 24.1 217 846-1084 5-227 (282)
299 cd03299 ABC_ModC_like Archeal 100.0 1.4E-33 3.1E-38 318.2 25.1 199 874-1084 14-214 (235)
300 PRK10771 thiQ thiamine transpo 100.0 8E-34 1.7E-38 319.8 23.0 211 847-1084 2-214 (232)
301 PRK13635 cbiO cobalt transport 100.0 8.8E-34 1.9E-38 327.3 23.9 205 165-413 20-228 (279)
302 PRK13645 cbiO cobalt transport 100.0 1.1E-33 2.4E-38 328.8 24.7 219 846-1084 6-235 (289)
303 PRK14250 phosphate ABC transpo 100.0 9.6E-34 2.1E-38 320.8 23.6 209 846-1084 3-216 (241)
304 PRK14239 phosphate transporter 100.0 1.6E-33 3.5E-38 321.6 25.7 219 846-1084 5-231 (252)
305 PRK14257 phosphate ABC transpo 100.0 1.5E-33 3.3E-38 330.9 26.0 222 845-1084 79-308 (329)
306 PRK11308 dppF dipeptide transp 100.0 1.1E-33 2.5E-38 332.1 24.8 208 165-414 28-244 (327)
307 PRK14259 phosphate ABC transpo 100.0 1.4E-33 3.1E-38 324.3 24.9 219 845-1084 12-248 (269)
308 PRK11144 modC molybdate transp 100.0 5.9E-34 1.3E-38 338.5 22.4 195 170-413 16-217 (352)
309 PRK14244 phosphate ABC transpo 100.0 1.6E-33 3.5E-38 321.2 25.2 219 847-1084 6-232 (251)
310 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.5E-32 9.6E-37 353.7 42.1 210 845-1084 476-695 (710)
311 COG4618 ArpD ABC-type protease 100.0 3.6E-34 7.7E-39 330.0 19.7 238 106-416 322-562 (580)
312 PRK11248 tauB taurine transpor 100.0 1.1E-33 2.3E-38 322.6 23.5 201 165-410 14-216 (255)
313 PRK10895 lipopolysaccharide AB 100.0 8.4E-34 1.8E-38 321.6 22.6 206 165-413 16-225 (241)
314 PRK14270 phosphate ABC transpo 100.0 1.8E-33 4E-38 320.8 25.5 219 846-1084 4-230 (251)
315 PRK00349 uvrA excinuclease ABC 100.0 1.5E-32 3.2E-37 354.6 37.0 122 947-1084 792-922 (943)
316 PRK14274 phosphate ABC transpo 100.0 1.8E-33 4E-38 322.1 25.6 219 846-1084 12-238 (259)
317 PRK13636 cbiO cobalt transport 100.0 8.6E-34 1.9E-38 328.3 23.1 207 165-414 19-231 (283)
318 PRK11247 ssuB aliphatic sulfon 100.0 6.4E-34 1.4E-38 323.8 21.6 194 166-410 26-219 (257)
319 cd03213 ABCG_EPDR ABCG transpo 100.0 1.4E-33 3.1E-38 308.5 23.4 190 846-1082 3-194 (194)
320 KOG0066 eIF2-interacting prote 100.0 2.5E-33 5.4E-38 312.9 25.6 211 165-413 277-498 (807)
321 TIGR03410 urea_trans_UrtE urea 100.0 8.3E-34 1.8E-38 319.4 22.2 202 165-412 13-219 (230)
322 PRK14240 phosphate transporter 100.0 2.2E-33 4.8E-38 320.0 25.8 219 846-1084 3-229 (250)
323 PRK14262 phosphate ABC transpo 100.0 2.1E-33 4.6E-38 320.1 25.7 218 847-1084 4-229 (250)
324 PRK15093 antimicrobial peptide 100.0 2.2E-33 4.8E-38 331.0 26.4 222 847-1084 4-243 (330)
325 PRK14260 phosphate ABC transpo 100.0 2.2E-33 4.7E-38 321.4 25.5 220 846-1084 7-238 (259)
326 PRK13632 cbiO cobalt transport 100.0 1.4E-33 3E-38 324.9 24.0 205 165-413 22-230 (271)
327 PRK14253 phosphate ABC transpo 100.0 2.1E-33 4.6E-38 319.9 25.2 219 846-1084 3-228 (249)
328 PRK13641 cbiO cobalt transport 100.0 8.7E-34 1.9E-38 329.0 22.2 205 165-413 20-233 (287)
329 PRK10584 putative ABC transpor 100.0 2.4E-33 5.3E-38 315.2 25.1 197 166-406 24-227 (228)
330 PRK14236 phosphate transporter 100.0 3.2E-33 6.9E-38 322.1 26.6 220 845-1084 24-251 (272)
331 COG4181 Predicted ABC-type tra 100.0 6.6E-34 1.4E-38 284.3 18.0 197 870-1079 21-225 (228)
332 PRK14258 phosphate ABC transpo 100.0 2.9E-33 6.2E-38 320.6 26.0 221 846-1084 7-240 (261)
333 cd03292 ABC_FtsE_transporter F 100.0 8E-34 1.7E-38 316.0 20.8 195 165-403 14-214 (214)
334 COG1132 MdlB ABC-type multidru 100.0 7.7E-34 1.7E-38 361.0 23.5 208 165-414 342-552 (567)
335 TIGR03375 type_I_sec_LssB type 100.0 3.7E-32 7.9E-37 353.3 39.6 212 845-1084 462-683 (694)
336 PRK15112 antimicrobial peptide 100.0 2.1E-33 4.5E-38 322.8 24.7 223 847-1084 5-234 (267)
337 TIGR01184 ntrCD nitrate transp 100.0 1E-33 2.2E-38 318.2 21.5 202 168-412 1-202 (230)
338 cd03297 ABC_ModC_molybdenum_tr 100.0 2.1E-33 4.5E-38 312.5 23.7 191 877-1082 16-214 (214)
339 PRK13548 hmuV hemin importer A 100.0 1.6E-33 3.4E-38 322.1 23.3 206 165-413 15-229 (258)
340 TIGR02142 modC_ABC molybdenum 100.0 1.5E-33 3.2E-38 335.7 23.9 199 170-413 15-220 (354)
341 TIGR02142 modC_ABC molybdenum 100.0 2.1E-33 4.5E-38 334.4 25.0 194 877-1084 15-216 (354)
342 TIGR02673 FtsE cell division A 100.0 1.1E-33 2.3E-38 315.0 21.1 194 165-402 15-214 (214)
343 PRK11144 modC molybdate transp 100.0 2.1E-33 4.5E-38 333.9 24.8 190 877-1084 16-213 (352)
344 TIGR02769 nickel_nikE nickel i 100.0 2E-33 4.3E-38 322.7 23.8 207 164-413 23-239 (265)
345 PRK11614 livF leucine/isoleuci 100.0 1.2E-33 2.5E-38 319.6 21.6 203 165-413 18-225 (237)
346 TIGR02770 nickel_nikD nickel i 100.0 1.4E-33 3.1E-38 317.2 22.2 207 167-413 1-214 (230)
347 PRK14273 phosphate ABC transpo 100.0 3.4E-33 7.4E-38 319.1 25.3 206 166-413 21-237 (254)
348 TIGR00972 3a0107s01c2 phosphat 100.0 2.1E-33 4.6E-38 319.4 23.5 206 166-413 15-231 (247)
349 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 6.6E-34 1.4E-38 369.1 21.9 205 165-414 466-673 (686)
350 PRK15093 antimicrobial peptide 100.0 3.1E-33 6.7E-38 329.8 25.5 217 165-413 20-247 (330)
351 TIGR03411 urea_trans_UrtD urea 100.0 2.1E-33 4.5E-38 318.7 23.1 211 165-412 15-229 (242)
352 PRK14272 phosphate ABC transpo 100.0 5E-33 1.1E-37 317.5 26.4 216 846-1084 4-231 (252)
353 COG1132 MdlB ABC-type multidru 100.0 4.1E-34 8.8E-39 363.5 19.3 211 845-1084 327-547 (567)
354 TIGR03005 ectoine_ehuA ectoine 100.0 2.2E-33 4.8E-38 320.3 23.4 206 165-413 13-235 (252)
355 PRK13642 cbiO cobalt transport 100.0 3.1E-33 6.6E-38 322.9 24.7 216 846-1084 4-224 (277)
356 PRK11300 livG leucine/isoleuci 100.0 2.3E-33 5E-38 320.9 23.3 221 165-413 18-242 (255)
357 TIGR02770 nickel_nikD nickel i 100.0 2E-33 4.3E-38 316.1 22.3 201 874-1084 1-210 (230)
358 PRK10418 nikD nickel transport 100.0 4.5E-33 9.8E-38 317.9 25.5 214 845-1084 3-225 (254)
359 COG1245 Predicted ATPase, RNas 100.0 3.7E-32 8.1E-37 308.1 32.4 173 875-1073 357-530 (591)
360 PRK13644 cbiO cobalt transport 100.0 1.7E-33 3.7E-38 324.3 22.1 203 166-413 16-223 (274)
361 PRK14261 phosphate ABC transpo 100.0 4.6E-33 9.9E-38 317.9 25.5 219 846-1084 6-232 (253)
362 COG4525 TauB ABC-type taurine 100.0 1.7E-33 3.6E-38 287.2 19.4 206 165-415 18-225 (259)
363 PRK13652 cbiO cobalt transport 100.0 2.5E-33 5.4E-38 323.7 23.5 205 166-413 18-226 (277)
364 TIGR02982 heterocyst_DevA ABC 100.0 3.9E-33 8.4E-38 311.7 24.3 211 847-1078 2-219 (220)
365 PRK13633 cobalt transporter AT 100.0 2.4E-33 5.1E-38 324.4 23.2 205 165-413 23-232 (280)
366 PRK14249 phosphate ABC transpo 100.0 5.4E-33 1.2E-37 316.9 25.9 219 846-1084 4-230 (251)
367 PRK11701 phnK phosphonate C-P 100.0 5E-33 1.1E-37 318.4 25.5 215 846-1084 6-236 (258)
368 PRK13648 cbiO cobalt transport 100.0 3E-33 6.5E-38 321.9 23.8 204 166-413 23-230 (269)
369 PRK10762 D-ribose transporter 100.0 3.1E-33 6.6E-38 349.8 25.8 218 847-1086 5-227 (501)
370 PRK14271 phosphate ABC transpo 100.0 1E-32 2.2E-37 317.9 28.0 219 846-1084 21-246 (276)
371 PRK10908 cell division protein 100.0 2.2E-33 4.8E-38 314.1 21.8 196 165-404 15-216 (222)
372 PRK14263 phosphate ABC transpo 100.0 7E-33 1.5E-37 316.9 26.2 219 845-1084 7-240 (261)
373 PRK14257 phosphate ABC transpo 100.0 4.5E-33 9.6E-38 327.0 25.1 211 165-413 95-312 (329)
374 PRK14250 phosphate ABC transpo 100.0 2.4E-33 5.3E-38 317.5 22.1 200 166-413 17-220 (241)
375 cd03225 ABC_cobalt_CbiO_domain 100.0 1.9E-33 4.1E-38 312.3 20.8 194 165-402 14-211 (211)
376 PRK14275 phosphate ABC transpo 100.0 5.4E-33 1.2E-37 321.9 25.4 215 846-1084 39-265 (286)
377 PRK14248 phosphate ABC transpo 100.0 5E-33 1.1E-37 320.1 24.9 215 846-1084 21-247 (268)
378 TIGR01846 type_I_sec_HlyB type 100.0 8.8E-32 1.9E-36 349.5 39.7 212 845-1084 454-675 (694)
379 PRK14268 phosphate ABC transpo 100.0 3.5E-33 7.5E-38 319.6 23.3 206 165-413 25-241 (258)
380 cd03299 ABC_ModC_like Archeal 100.0 4.3E-33 9.3E-38 314.3 23.8 204 167-413 14-218 (235)
381 PRK14251 phosphate ABC transpo 100.0 6.3E-33 1.4E-37 316.4 25.4 215 846-1084 4-230 (251)
382 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.4E-33 5.3E-38 311.4 21.4 195 170-407 16-211 (211)
383 PRK13649 cbiO cobalt transport 100.0 4.5E-33 9.7E-38 322.5 24.4 205 165-413 20-233 (280)
384 cd03300 ABC_PotA_N PotA is an 100.0 4.7E-33 1E-37 313.5 23.9 206 165-413 13-219 (232)
385 TIGR03740 galliderm_ABC gallid 100.0 3.5E-33 7.6E-38 312.8 22.6 197 165-410 13-209 (223)
386 PRK13543 cytochrome c biogenes 100.0 5.8E-33 1.2E-37 308.7 24.1 202 846-1074 11-212 (214)
387 COG0444 DppD ABC-type dipeptid 100.0 5.7E-33 1.2E-37 310.2 24.0 224 847-1084 2-238 (316)
388 PRK14255 phosphate ABC transpo 100.0 9.2E-33 2E-37 315.3 26.3 219 846-1084 5-231 (252)
389 PRK13639 cbiO cobalt transport 100.0 5.4E-33 1.2E-37 320.5 24.7 204 166-413 16-225 (275)
390 PRK09700 D-allose transporter 100.0 3.6E-33 7.8E-38 350.1 25.1 219 846-1086 5-231 (510)
391 PRK13638 cbiO cobalt transport 100.0 4.5E-33 9.8E-38 320.8 23.7 205 165-413 14-224 (271)
392 PRK14247 phosphate ABC transpo 100.0 4.4E-33 9.6E-38 317.5 23.3 213 165-413 16-233 (250)
393 PRK10619 histidine/lysine/argi 100.0 3.6E-33 7.8E-38 319.4 22.6 205 165-413 18-240 (257)
394 PRK10575 iron-hydroxamate tran 100.0 3.4E-33 7.4E-38 320.7 22.4 210 165-413 24-236 (265)
395 PRK10790 putative multidrug tr 100.0 2.8E-33 6E-38 357.9 23.9 206 166-414 355-563 (592)
396 PRK10790 putative multidrug tr 100.0 2.4E-33 5.3E-38 358.4 23.3 210 845-1084 339-558 (592)
397 PRK15112 antimicrobial peptide 100.0 4.6E-33 9.9E-38 319.9 23.1 207 165-413 26-238 (267)
398 cd03235 ABC_Metallic_Cations A 100.0 2.3E-33 5.1E-38 312.0 19.9 200 165-407 12-213 (213)
399 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 7.8E-33 1.7E-37 309.6 24.3 192 870-1082 33-224 (224)
400 PRK13538 cytochrome c biogenes 100.0 5.5E-33 1.2E-37 306.6 22.7 199 847-1072 2-202 (204)
401 PRK13640 cbiO cobalt transport 100.0 5.5E-33 1.2E-37 321.4 23.6 207 166-413 21-231 (282)
402 PRK15056 manganese/iron transp 100.0 6.9E-33 1.5E-37 319.3 24.2 218 846-1085 6-226 (272)
403 PRK11124 artP arginine transpo 100.0 3.4E-33 7.3E-38 316.9 21.3 203 166-412 16-228 (242)
404 cd03231 ABC_CcmA_heme_exporter 100.0 4.6E-33 9.9E-38 306.4 21.7 195 848-1072 2-198 (201)
405 PRK11176 lipid transporter ATP 100.0 3.3E-33 7.1E-38 357.0 23.7 213 845-1084 340-562 (582)
406 PRK10253 iron-enterobactin tra 100.0 4.1E-33 8.9E-38 320.1 22.0 209 165-413 20-232 (265)
407 PRK09984 phosphonate/organopho 100.0 3.8E-33 8.3E-38 320.1 21.8 216 165-412 17-240 (262)
408 PRK13642 cbiO cobalt transport 100.0 1.4E-32 3E-37 317.5 26.5 205 165-413 20-228 (277)
409 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.7E-33 8E-38 319.6 21.5 210 846-1084 2-220 (275)
410 PRK10771 thiQ thiamine transpo 100.0 5.8E-33 1.3E-37 312.8 22.7 201 170-413 17-218 (232)
411 KOG0056 Heavy metal exporter H 100.0 8.2E-34 1.8E-38 321.3 15.6 209 164-414 550-761 (790)
412 TIGR01978 sufC FeS assembly AT 100.0 5.8E-33 1.2E-37 315.4 22.7 213 165-413 13-233 (243)
413 PRK13645 cbiO cobalt transport 100.0 4.1E-33 8.9E-38 324.0 21.9 206 165-413 24-239 (289)
414 TIGR02633 xylG D-xylose ABC tr 100.0 7.3E-33 1.6E-37 346.7 25.8 220 847-1086 2-227 (500)
415 PRK14242 phosphate transporter 100.0 6.8E-33 1.5E-37 316.5 23.3 210 166-413 20-236 (253)
416 TIGR00968 3a0106s01 sulfate AB 100.0 7.7E-33 1.7E-37 312.6 23.4 206 165-413 13-219 (237)
417 PRK11160 cysteine/glutathione 100.0 3.2E-33 6.9E-38 354.7 22.8 212 845-1084 337-557 (574)
418 PRK11176 lipid transporter ATP 100.0 2.3E-33 5E-38 358.3 21.7 209 165-414 356-567 (582)
419 CHL00131 ycf16 sulfate ABC tra 100.0 1.5E-32 3.3E-37 313.5 26.1 220 846-1084 7-236 (252)
420 PRK10419 nikE nickel transport 100.0 1E-32 2.2E-37 317.0 24.7 224 847-1085 4-237 (268)
421 PRK14238 phosphate transporter 100.0 9.7E-33 2.1E-37 317.7 24.6 219 846-1084 24-250 (271)
422 PRK14265 phosphate ABC transpo 100.0 1.4E-32 3E-37 316.8 25.6 219 845-1084 19-253 (274)
423 PRK14267 phosphate ABC transpo 100.0 6.9E-33 1.5E-37 316.5 22.9 212 166-413 18-236 (253)
424 PRK15439 autoinducer 2 ABC tra 100.0 8.1E-33 1.8E-37 346.1 25.2 211 846-1085 11-225 (510)
425 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3E-33 6.6E-38 364.6 22.3 206 165-414 492-700 (710)
426 PRK14254 phosphate ABC transpo 100.0 1.6E-32 3.4E-37 317.7 25.7 213 846-1084 39-264 (285)
427 PRK10744 pstB phosphate transp 100.0 1.4E-32 3.1E-37 314.8 25.2 210 166-413 27-243 (260)
428 cd03252 ABCC_Hemolysin The ABC 100.0 2.6E-33 5.7E-38 316.8 18.8 211 847-1084 1-220 (237)
429 PRK14237 phosphate transporter 100.0 1.9E-32 4.2E-37 314.7 26.2 211 165-413 33-250 (267)
430 TIGR01277 thiQ thiamine ABC tr 100.0 9.3E-33 2E-37 307.0 22.4 199 167-408 13-212 (213)
431 PRK14243 phosphate transporter 100.0 1.3E-32 2.9E-37 315.5 24.4 218 846-1084 10-243 (264)
432 COG4148 ModC ABC-type molybdat 100.0 1.1E-33 2.3E-38 303.6 14.2 196 170-414 16-218 (352)
433 TIGR03375 type_I_sec_LssB type 100.0 6E-33 1.3E-37 360.7 24.1 208 165-414 478-688 (694)
434 PRK11231 fecE iron-dicitrate t 100.0 6.4E-33 1.4E-37 316.9 21.4 209 165-413 15-226 (255)
435 TIGR00958 3a01208 Conjugate Tr 100.0 5.1E-33 1.1E-37 360.6 23.2 206 165-414 494-702 (711)
436 TIGR03873 F420-0_ABC_ATP propo 100.0 8.3E-33 1.8E-37 316.2 22.2 208 165-412 14-224 (256)
437 PRK14266 phosphate ABC transpo 100.0 1.7E-32 3.6E-37 312.8 24.6 218 847-1084 4-229 (250)
438 cd03230 ABC_DR_subfamily_A Thi 100.0 1E-32 2.2E-37 296.3 21.5 168 848-1075 2-171 (173)
439 PRK11288 araG L-arabinose tran 100.0 1.2E-32 2.6E-37 344.4 25.6 216 846-1083 4-223 (501)
440 PRK14246 phosphate ABC transpo 100.0 2.1E-32 4.6E-37 312.2 25.4 215 847-1084 11-236 (257)
441 TIGR02323 CP_lyasePhnK phospho 100.0 2.1E-32 4.6E-37 312.5 25.4 214 847-1084 4-233 (253)
442 PRK14241 phosphate transporter 100.0 1.1E-32 2.4E-37 315.5 23.0 212 165-413 17-241 (258)
443 PRK14245 phosphate ABC transpo 100.0 1.1E-32 2.4E-37 314.2 22.7 210 165-413 16-233 (250)
444 cd03262 ABC_HisP_GlnQ_permease 100.0 5.8E-33 1.3E-37 308.9 19.8 195 165-403 13-213 (213)
445 PRK10247 putative ABC transpor 100.0 1.1E-32 2.5E-37 308.7 22.3 203 846-1076 7-214 (225)
446 PRK11160 cysteine/glutathione 100.0 5.8E-33 1.3E-37 352.3 22.4 200 166-414 354-562 (574)
447 PRK14235 phosphate transporter 100.0 1.3E-32 2.8E-37 316.1 23.2 211 166-413 33-250 (267)
448 PRK11701 phnK phosphonate C-P 100.0 1.6E-32 3.6E-37 314.1 23.8 207 165-413 19-240 (258)
449 COG4987 CydC ABC-type transpor 100.0 3.1E-33 6.8E-38 325.7 17.9 201 165-414 351-561 (573)
450 TIGR00958 3a01208 Conjugate Tr 100.0 4.5E-33 9.7E-38 361.1 21.4 211 845-1084 477-697 (711)
451 PRK14270 phosphate ABC transpo 100.0 1.7E-32 3.6E-37 312.9 23.5 211 165-413 17-234 (251)
452 cd03297 ABC_ModC_molybdenum_tr 100.0 1.4E-32 3E-37 306.0 22.2 192 170-407 16-214 (214)
453 PRK03695 vitamin B12-transport 100.0 1.5E-32 3.2E-37 312.2 22.9 197 874-1084 11-217 (248)
454 TIGR00630 uvra excinuclease AB 100.0 3E-31 6.4E-36 342.0 37.8 123 946-1084 789-920 (924)
455 PRK10982 galactose/methyl gala 100.0 1.2E-32 2.7E-37 343.7 24.3 206 872-1086 11-220 (491)
456 PRK14256 phosphate ABC transpo 100.0 2E-32 4.3E-37 312.4 23.9 212 165-413 17-235 (252)
457 PRK14239 phosphate transporter 100.0 1.9E-32 4.2E-37 312.7 23.8 210 166-413 19-235 (252)
458 PRK09580 sufC cysteine desulfu 100.0 2.9E-32 6.2E-37 310.6 25.0 219 847-1084 2-230 (248)
459 TIGR01166 cbiO cobalt transpor 100.0 1.1E-32 2.5E-37 300.8 20.7 178 872-1059 5-188 (190)
460 PRK14252 phosphate ABC transpo 100.0 4.6E-32 9.9E-37 311.6 26.5 220 845-1084 15-244 (265)
461 PRK10418 nikD nickel transport 100.0 2.4E-32 5.1E-37 312.0 24.0 206 166-413 17-229 (254)
462 PRK14274 phosphate ABC transpo 100.0 1.8E-32 3.9E-37 314.0 23.1 210 166-413 26-242 (259)
463 COG4987 CydC ABC-type transpor 100.0 4.2E-33 9.1E-38 324.7 17.9 211 846-1084 336-556 (573)
464 cd03245 ABCC_bacteriocin_expor 100.0 9.2E-33 2E-37 308.8 20.1 209 847-1082 3-220 (220)
465 PRK14259 phosphate ABC transpo 100.0 2E-32 4.4E-37 314.7 23.5 209 165-413 26-252 (269)
466 TIGR01189 ccmA heme ABC export 100.0 1.8E-32 3.8E-37 301.2 21.9 194 848-1071 2-197 (198)
467 PRK13539 cytochrome c biogenes 100.0 1.7E-32 3.7E-37 303.3 21.9 197 847-1073 3-199 (207)
468 cd03213 ABCG_EPDR ABCG transpo 100.0 2.5E-32 5.4E-37 298.6 22.7 170 165-407 22-194 (194)
469 COG4181 Predicted ABC-type tra 100.0 1.1E-32 2.4E-37 275.6 18.0 202 160-405 18-226 (228)
470 COG4152 ABC-type uncharacteriz 100.0 6.4E-33 1.4E-37 292.9 17.0 209 163-416 13-221 (300)
471 PRK14269 phosphate ABC transpo 100.0 2.2E-32 4.9E-37 310.8 23.0 212 165-413 15-229 (246)
472 PTZ00265 multidrug resistance 100.0 8.3E-33 1.8E-37 377.1 22.9 213 165-414 1181-1452(1466)
473 cd03251 ABCC_MsbA MsbA is an e 100.0 6.8E-33 1.5E-37 312.9 17.9 209 848-1084 2-220 (234)
474 PRK14244 phosphate ABC transpo 100.0 2.2E-32 4.8E-37 311.9 22.2 212 165-413 18-236 (251)
475 PRK14262 phosphate ABC transpo 100.0 2.8E-32 6.1E-37 310.9 22.9 211 165-413 16-233 (250)
476 cd03229 ABC_Class3 This class 100.0 1.5E-32 3.3E-37 296.3 19.5 170 848-1075 2-177 (178)
477 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 8E-33 1.7E-37 313.1 18.0 210 848-1084 2-221 (238)
478 TIGR01193 bacteriocin_ABC ABC- 100.0 6.6E-33 1.4E-37 361.0 19.8 207 166-414 488-697 (708)
479 PRK13546 teichoic acids export 100.0 1E-31 2.2E-36 306.7 27.1 194 870-1085 35-228 (264)
480 cd03254 ABCC_Glucan_exporter_l 100.0 8.4E-33 1.8E-37 311.1 17.9 211 846-1084 2-221 (229)
481 PRK13547 hmuV hemin importer A 100.0 2.8E-32 6E-37 313.0 22.5 213 165-413 14-243 (272)
482 PRK14263 phosphate ABC transpo 100.0 3.1E-32 6.6E-37 311.7 22.6 210 164-413 20-244 (261)
483 COG4618 ArpD ABC-type protease 100.0 1.1E-32 2.3E-37 317.9 18.9 232 836-1096 324-563 (580)
484 PRK14271 phosphate ABC transpo 100.0 4.2E-32 9.2E-37 312.9 23.7 211 165-413 34-250 (276)
485 PRK14240 phosphate transporter 100.0 3.7E-32 8E-37 310.0 22.9 210 166-413 17-233 (250)
486 PRK14272 phosphate ABC transpo 100.0 4.3E-32 9.3E-37 309.8 23.5 208 165-413 17-235 (252)
487 TIGR02982 heterocyst_DevA ABC 100.0 5.3E-32 1.2E-36 302.5 23.7 196 165-403 18-219 (220)
488 PRK14264 phosphate ABC transpo 100.0 7.2E-32 1.6E-36 315.2 25.6 221 846-1084 45-284 (305)
489 TIGR02324 CP_lyasePhnL phospho 100.0 5.6E-32 1.2E-36 303.3 23.6 210 847-1073 2-223 (224)
490 PRK10261 glutathione transport 100.0 3.6E-32 7.8E-37 346.9 24.9 207 165-413 337-552 (623)
491 PRK03695 vitamin B12-transport 100.0 3.5E-32 7.7E-37 309.1 22.0 201 167-413 11-221 (248)
492 PRK14253 phosphate ABC transpo 100.0 3.7E-32 8E-37 309.7 22.0 210 165-412 16-231 (249)
493 cd03232 ABC_PDR_domain2 The pl 100.0 4.8E-32 1E-36 296.0 21.9 169 165-407 20-192 (192)
494 PRK14249 phosphate ABC transpo 100.0 5.9E-32 1.3E-36 308.3 23.6 211 165-413 17-234 (251)
495 PRK14255 phosphate ABC transpo 100.0 1.2E-31 2.6E-36 306.1 26.1 211 165-413 18-235 (252)
496 cd03217 ABC_FeS_Assembly ABC-t 100.0 5.5E-32 1.2E-36 297.5 22.3 190 848-1096 2-196 (200)
497 cd03252 ABCC_Hemolysin The ABC 100.0 3E-32 6.4E-37 308.3 20.7 206 165-414 15-225 (237)
498 cd03289 ABCC_CFTR2 The CFTR su 100.0 3E-32 6.5E-37 312.1 21.0 198 166-414 18-225 (275)
499 PRK10419 nikE nickel transport 100.0 6.3E-32 1.4E-36 310.5 23.7 206 165-413 25-240 (268)
500 COG1123 ATPase components of v 100.0 4.1E-32 8.9E-37 324.4 22.9 210 163-413 302-518 (539)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.7e-258 Score=2382.77 Aligned_cols=1339 Identities=53% Similarity=0.921 Sum_probs=1256.5
Q ss_pred cchhHhhhHHHHhhCCChhhhhhcccccC-CCCcceeccCCcChHhhHHHHHHhhhcccccHHHHHHHHHHHHhhcCCCC
Q 000524 36 EDDEEALKWAALEKLPTYNRLRKGLLTTS-RGEAFEVDVSNLGLQQRQRLINKLVKVTEVDNEKFLLKLKSRIDRVGIDL 114 (1444)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (1444)
+||||+|||||+|||||++| +++.+. ++ ++|+.+++..+++.++++..+..++|+++++.++++|++++ ++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~--~~ 83 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSIFES---EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV--EL 83 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhhccC---cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc--cC
Confidence 45999999999999999999 555432 22 79999999999999999999999999999999999999998 89
Q ss_pred CccEEEEeceEEEEEEecCCCcCCChhHHHHHHHHHHHhhhccCCCccccceEeeceeeEEeCCeEEEEEcCCCCcHHHH
Q 000524 115 PKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTL 194 (1444)
Q Consensus 115 p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTL 194 (1444)
|.++++++++.+++++..| ||+.|...+.++.++...+.. ++.+.+||+|+||.++||+|++++||||||||||
T Consensus 84 p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttl 157 (1391)
T KOG0065|consen 84 PTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGKTTL 157 (1391)
T ss_pred CceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCchHHH
Confidence 9999999999999998766 999999999999988766644 5566889999999999999999999999999999
Q ss_pred HHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcC
Q 000524 195 LLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAG 274 (1444)
Q Consensus 195 L~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~ 274 (1444)
|++|+|.++..+...|+|+|||++.+++.+++.++|++|+|.|+|+|||||||+|+++|++++.|++ +..|+|++.
T Consensus 158 lkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~~~- 233 (1391)
T KOG0065|consen 158 LKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREKLA- 233 (1391)
T ss_pred HHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHHHH-
Confidence 9999999998777789999999999999999999999999999999999999999999999999887 555665531
Q ss_pred CCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCC
Q 000524 275 IKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGL 354 (1444)
Q Consensus 275 ~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgL 354 (1444)
..+|++++++||++|+||+|||+++||+||||||||+||++++++++++||||+|+||
T Consensus 234 ----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t~GL 291 (1391)
T KOG0065|consen 234 ----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEITRGL 291 (1391)
T ss_pred ----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeecccccc
Confidence 2689999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHH
Q 000524 355 DSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQ 434 (1444)
Q Consensus 355 Ds~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~ 434 (1444)
|++|+.+|+++||+++|..+.|.+++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++|||++
T Consensus 292 DSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~ADfLt 371 (1391)
T KOG0065|consen 292 DSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTADFLT 371 (1391)
T ss_pred cHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhhHHhhcCcccCcccccccccccccCCchHHHHHHHHHHHHH
Q 000524 435 EVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELL 514 (1444)
Q Consensus 435 ~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l 514 (1444)
++++++++.++|.++..|+.+.+++|+.+.|.+++.+.++..+++.+.++.+.++.++..++|..+.|+|++.|+.|+++
T Consensus 372 ~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R~f~ 451 (1391)
T KOG0065|consen 372 EVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIREFL 451 (1391)
T ss_pred HhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCc
Q 000524 515 LMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRF 594 (1444)
Q Consensus 515 ~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~ 594 (1444)
+++||.+++++++++.+++|+++|++|+++.+ .+..++..+.|++||++++.+|++++++++++.++|||+|||+..|
T Consensus 452 l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~~~f 529 (1391)
T KOG0065|consen 452 LMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRDLSF 529 (1391)
T ss_pred HHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhcccc
Confidence 99999999999999999999999999999885 4566788999999999999999999999999999999999999999
Q ss_pred cChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHH
Q 000524 595 FPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFGTFA 674 (1444)
Q Consensus 595 y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~ 674 (1444)
|++||+.++++++++|..++++++|.+|+||++|+.+++++||.++++++++++|++++||+++++++++..|+.++++.
T Consensus 530 Y~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g~~~ 609 (1391)
T KOG0065|consen 530 YPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIGGIL 609 (1391)
T ss_pred cChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHHHHhhcCCcccccC------------CC---CcccchHHHHhc
Q 000524 675 LLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFT------------PN---SYESIGVQVLKS 739 (1444)
Q Consensus 675 ~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~------------~~---~~~~~g~~~L~~ 739 (1444)
++++++++||+|++.+||+||+|++|++|++|+++++++|||++++|.|.. .. ...+.|.++++.
T Consensus 610 ~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~v~g 689 (1391)
T KOG0065|consen 610 LLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDYVSG 689 (1391)
T ss_pred HHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceEEec
Confidence 999999999999999999999999999999999999999999999999971 11 124678999999
Q ss_pred cCcc-----cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccccccccccccccccccCCCCCCccc
Q 000524 740 RGFF-----AHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDIS 814 (1444)
Q Consensus 740 ~~~~-----~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 814 (1444)
+++. ...+|+|+++|+++||.++|++..++++.|.++..+.++.+..+....+....... .+ ....
T Consensus 690 ~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~~--------~~-~~~~ 760 (1391)
T KOG0065|consen 690 RDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSAG--------SS-SEIE 760 (1391)
T ss_pred ccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhcc--------cc-cccc
Confidence 8888 77889999999999999999999999999999998888776544333221110000 00 0000
Q ss_pred CCCCCcchhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCC
Q 000524 815 GRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVS 894 (1444)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~s 894 (1444)
......+.++.++..|+.+..++++||.|.+++|-+++.+| +++++|+||||.++||.+|||||+|
T Consensus 761 -----------~~~~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG~LTALMG~S 826 (1391)
T KOG0065|consen 761 -----------KLDDSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPGVLTALMGES 826 (1391)
T ss_pred -----------ccccccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCCceeehhcCC
Confidence 00001111345788899999999999999999999888776 5678999999999999999999999
Q ss_pred CCchHHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHH
Q 000524 895 GAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFI 974 (1444)
Q Consensus 895 GaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v 974 (1444)
|||||||||+|+||++.|.++|+|+|||.|+++..|+|.+|||+|+|+|.|.+||||.|.|+|+||+|.+++.+++.++|
T Consensus 827 GAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v~~~ek~~yV 906 (1391)
T KOG0065|consen 827 GAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEVSDEEKYEYV 906 (1391)
T ss_pred CCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcCCHHHHHHHH
Confidence 99999999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCC-CEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEE
Q 000524 975 EEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVC 1053 (1444)
Q Consensus 975 ~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p-~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~ 1053 (1444)
++|++.++|++++|.+||.+| +|||++|||||+||+||++|| .||||||||||||+++|..|++++|+++++|+||||
T Consensus 907 e~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlC 985 (1391)
T KOG0065|consen 907 EEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILC 985 (1391)
T ss_pred HHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEE
Confidence 999999999999999999999 999999999999999999999 899999999999999999999999999999999999
Q ss_pred EecCCCHHHHHhcceEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCcccCCCCCCccceEEEeccccchhhccccHHHH
Q 000524 1054 TIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPGVEKIKDGYNPATWMLEVTASSQEVALGVDFNDI 1133 (1444)
Q Consensus 1054 t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~ 1133 (1444)
||||||.++|+.||++++|++||++||+||+|++|+++++|||+++|++ |++..||||||||+++.+.+.+.+.||+++
T Consensus 986 TIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~-~~~~~NPA~~mLevi~~~~~~~~~~D~a~~ 1064 (1391)
T KOG0065|consen 986 TIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVK-CISDENPAEWMLEVIGAGAEASLSVDFAEI 1064 (1391)
T ss_pred EecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCcc-CCCCCChHHHHHhhcccccccccCccHHHH
Confidence 9999999999999999999999999999999999999999999999985 666569999999999999988889999999
Q ss_pred HHhcHHHHHHHHHHHHhcCCCCC-CCCCCCCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHhhcc
Q 000524 1134 FRCSELYRRNKALIEELSKPTPG-SKDLYFPTQYSQSAFTQFMACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWD 1212 (1444)
Q Consensus 1134 ~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~ 1212 (1444)
|++|++++++++++++++.++++ +.+..+.++|++|+|.|++.|+|||+++|||+|+|+.+|++++++.||++|++||+
T Consensus 1065 w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~gl~iGf~F~~ 1144 (1391)
T KOG0065|consen 1065 WKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAGLFIGFTFWK 1144 (1391)
T ss_pred HhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHhheeeeee
Confidence 99999999999999999999998 78888899999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChHhHHHHHhHHHHHHHHHHHhhhhhcchhhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhhee
Q 000524 1213 MGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVI 1292 (1444)
Q Consensus 1213 ~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i 1292 (1444)
.|+ ++||++|.+|++|+++++.+.+++..++|.+..||.++||||++||||+.||++||+++|+||.++++++|.+|
T Consensus 1145 ~g~---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l~~stl~~~~ 1221 (1391)
T KOG0065|consen 1145 VGH---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNLLQSTLFFLI 1221 (1391)
T ss_pred cCC---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHHHHHHHhhee
Confidence 994 68999999999999999999998888889899999999999999999999999999999999999999999999
Q ss_pred eecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhc
Q 000524 1293 VYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWAN 1372 (1444)
Q Consensus 1293 ~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~is 1372 (1444)
+|+|+||++++.+|+||++++++..+|++++|||+.+++||.++|+++++++++++++||||++|++.||.||+||||+|
T Consensus 1222 ~Y~~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~fW~wmy~ls 1301 (1391)
T KOG0065|consen 1222 TYYPIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPKFWIWMYYLS 1301 (1391)
T ss_pred eeeeccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccceeeeeeecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCcccccC----------CCCcHHHHHHhhcC----CccCchhhHHHHHHHHHHHHHHHHHHHHHh
Q 000524 1373 PVAWTLYGLIASQFGDVEDQME----------NGETVKHFLRDYFG----FKHDFLGLVAGVLTCFVALFGFVFALGIKQ 1438 (1444)
Q Consensus 1373 p~~y~~~~l~~~~~~~~~~~~~----------~g~~~~~~~~~~~g----~~~~~~~~~~~il~~~~~~f~~~~~~~l~~ 1438 (1444)
|++|.++|++..++||.+..|. +|+||++|+++++| |.++.......+..+|.+++.+++.+++|+
T Consensus 1302 P~ty~l~gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~~~~l~~f~~~y 1381 (1391)
T KOG0065|consen 1302 PVTYTLEGLISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLATTACVYCAYTVADAFLAAFNIKY 1381 (1391)
T ss_pred cHHHHHHHHHHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcceeEEEEeeeehHHHHHHHHHHHH
Confidence 9999999999999999999883 45799999999999 999998888888999999999999999999
Q ss_pred hcccCC
Q 000524 1439 LNFQRR 1444 (1444)
Q Consensus 1439 ~~~~~r 1444 (1444)
.|+|||
T Consensus 1382 ~~~wrn 1387 (1391)
T KOG0065|consen 1382 LNFWRN 1387 (1391)
T ss_pred HHHHHh
Confidence 999987
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=9.8e-240 Score=2381.21 Aligned_cols=1439 Identities=60% Similarity=1.046 Sum_probs=1284.3
Q ss_pred CCCccccccccccccccccccCccccccC---C----CccchhHhhhHHHHhhCCChhhhhhcccccC-----CCC---c
Q 000524 4 SHDSYLASTSLRGNISRWRTSSVGAFSKS---L----REEDDEEALKWAALEKLPTYNRLRKGLLTTS-----RGE---A 68 (1444)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~ 68 (1444)
.||++.++-+.+.+.++|.. +++|++. + ..|||||+|+|||+||||||+|+|++++.+. .|+ .
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (1470)
T PLN03140 4 RGGSMRRSISRSVSRSSRNM--EDVFSGGSQSRRRTSSVDEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLH 81 (1470)
T ss_pred CcccHHHHHHHHhhhhhhhh--hhhhhccchhccccccccCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccc
Confidence 45555555444444456744 6888442 1 3678999999999999999999999999652 122 2
Q ss_pred ceeccCCcChHhhHHHHHHhhhcccccHHHHHHHHHHHHhhcCCCCCccEEEEeceEEEEEEecCCCcCCChhHHHHHHH
Q 000524 69 FEVDVSNLGLQQRQRLINKLVKVTEVDNEKFLLKLKSRIDRVGIDLPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVF 148 (1444)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~ 148 (1444)
.|+|+++|+.++++.+++++++++++|+++|++++++|.|++|+++|++||||+||+|++++.++++.+||++|.+.+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~ 161 (1470)
T PLN03140 82 KEVDVTKLDGNDRQKFIDMVFKVAEEDNEKFLKKFRNRIDRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIA 161 (1470)
T ss_pred cccccccCChHHHHHHHHhhhcccchhHHHHHHHHHhhhccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHH
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccCCCccccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceE
Q 000524 149 EDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTA 228 (1444)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~ 228 (1444)
+.+.+.++..++++.+++||+|+||.++|||+++|+||||||||||||+|+|+++|+.+++|+|+|||+++++..+++.+
T Consensus 162 ~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i 241 (1470)
T PLN03140 162 ESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTS 241 (1470)
T ss_pred HHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhccccee
Confidence 98876666545555678899999999999999999999999999999999999998777899999999999877777889
Q ss_pred EEEcCCCCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCC
Q 000524 229 AYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL 308 (1444)
Q Consensus 229 ~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL 308 (1444)
+||+|+|.|++++||+|||.|+++|++.+.++++..+..+++++.++.|+.++|.+||+.+.++.+.+..++++++.+||
T Consensus 242 ~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL 321 (1470)
T PLN03140 242 AYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGL 321 (1470)
T ss_pred EEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCC
Confidence 99999999999999999999999998877666666667778888888888899999999988888888899999999999
Q ss_pred cccccccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhH
Q 000524 309 EVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPET 388 (1444)
Q Consensus 309 ~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~ 388 (1444)
++|+||.||++++++|||||||||+||++|+++|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||++++
T Consensus 322 ~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i 401 (1470)
T PLN03140 322 DICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPET 401 (1470)
T ss_pred ccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998766889999999999999
Q ss_pred HhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhC
Q 000524 389 YDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSF 468 (1444)
Q Consensus 389 ~~~fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (1444)
+++||+|++|++|+++|+||++++.+||+++||+||+++|+|||+++++++++++++|.....|+++.++++++++|+++
T Consensus 402 ~~lfD~vilL~~G~ivy~G~~~~~~~yF~~lGf~cP~~~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s 481 (1470)
T PLN03140 402 FDLFDDIILLSEGQIVYQGPRDHILEFFESCGFKCPERKGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSF 481 (1470)
T ss_pred HHHhheEEEeeCceEEEeCCHHHHHHHHHHcCCCCCCCCChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999988878887766777778999999999999
Q ss_pred cchhhhHHhhcCcccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCC
Q 000524 469 HVGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHK 548 (1444)
Q Consensus 469 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~ 548 (1444)
+.++.+.++++.+.++...++.....++|..++++|+++|++|++++++||+..++.++++.+++|+++|++|++++.+.
T Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~ 561 (1470)
T PLN03140 482 HVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHT 561 (1470)
T ss_pred HHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 99888888877776666556666666789999999999999999999999999999999999999999999999987665
Q ss_pred CccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccc
Q 000524 549 HSLTDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIG 628 (1444)
Q Consensus 549 ~~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g 628 (1444)
.+..++..+.|++||++++.+|+++.+++.++.+||||+|||+..||++|+|+++++++++|+.++++++|++++|||+|
T Consensus 562 ~~~~~~~~~~g~lff~~l~~~~~~~~~l~~~~~~r~vf~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~G 641 (1470)
T PLN03140 562 RNEEDGALYIGALLFSMIINMFNGFAELALMIQRLPVFYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIG 641 (1470)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcC
Confidence 55567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHH
Q 000524 629 CDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQ 708 (1444)
Q Consensus 629 ~~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~ 708 (1444)
+++++++||.|+++++++++++.++|++++++++++.+|+.+++++++++++|+||++++++||+||+|++|+||+.|++
T Consensus 642 l~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~ 721 (1470)
T PLN03140 642 FAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGF 721 (1470)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCcccccC-CCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccc
Q 000524 709 NAIVANEFLGYSWKKFT-PNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEE 787 (1444)
Q Consensus 709 ~al~~nef~~~~~~~~~-~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~~~~~~~ 787 (1444)
+|+++|||.+..|.+.. .+.....|.++|+.+|+...+.|+|++++++++++++|+++++++++|.++.......+..+
T Consensus 722 eal~~NEf~~~~~~~~~~~~~~~~~G~~~L~~~g~~~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~ 801 (1470)
T PLN03140 722 NALAVNEMFAPRWMNKMASDNSTRLGTAVLNIFDVFTDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEE 801 (1470)
T ss_pred HHHHHHhccCccccCcccCCCCcccHHHHHHhcCcCccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCcccccc
Confidence 99999999998886432 23345789999999999998999999999999999999999999999998766655543322
Q ss_pred ccccccccc-cc-cccccccCCC--CCCcc-cCCCCC-c-chhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecch
Q 000524 788 SESNKQDNR-IR-GTVQLSARGE--SGEDI-SGRNSS-S-KSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQ 860 (1444)
Q Consensus 788 ~~~~~~~~~-~~-~~~~~~~~~~--~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 860 (1444)
......... .. .......... ..+.. ...... . ..............++++.+|+.|..++|+|++|.++.+.
T Consensus 802 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~ 881 (1470)
T PLN03140 802 TAEEMEGEEDSIPRSLSSADGNNTREVAIQRMSNPEGLSKNRDSSLEAANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPA 881 (1470)
T ss_pred chhhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcceEEEEEEEEEEccCc
Confidence 111000000 00 0000000000 00000 000000 0 0000000000112334566788899999999999999887
Q ss_pred hhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEEecC
Q 000524 861 EMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQN 940 (1444)
Q Consensus 861 ~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~ 940 (1444)
+++..+..++++.+|+|||+.++||+++||||||||||||||++|+|+.++|..+|+|.+||.+.++..+++.+|||+|+
T Consensus 882 ~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~ 961 (1470)
T PLN03140 882 EMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQN 961 (1470)
T ss_pred cccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccc
Confidence 65555554556789999999999999999999999999999999999987777899999999987655567789999999
Q ss_pred CCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEE
Q 000524 941 DIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1020 (1444)
Q Consensus 941 ~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il 1020 (1444)
|.+++.+||+|+|.|++.+|.+.+.+.+++++.++++++.++|.+++|+.+|.+++++|||||||||+||++|+++|+||
T Consensus 962 d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL 1041 (1470)
T PLN03140 962 DIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSII 1041 (1470)
T ss_pred cccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEE
Confidence 99999999999999999988876666677778899999999999999999999888999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCCcchhHHHHHHHhCCC
Q 000524 1021 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPG 1100 (1444)
Q Consensus 1021 lLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~~~~~~~~~yF~~~~g 1100 (1444)
||||||+|||+.++..+++.|++++++|+|||||+|||+.++++.||++++|++||+++|+||.+++++++++||++++|
T Consensus 1042 ~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g 1121 (1470)
T PLN03140 1042 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPG 1121 (1470)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCC
Confidence 99999999999999999999999998899999999999988999999999999889999999999999999999999988
Q ss_pred cccCCCCCCccceEEEeccccchhhccccHHHHHHhcHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCHHHHHHHHHHH
Q 000524 1101 VEKIKDGYNPATWMLEVTASSQEVALGVDFNDIFRCSELYRRNKALIEELSKPTPGSKDLYFPTQYSQSAFTQFMACLWK 1180 (1444)
Q Consensus 1101 ~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~l~~R 1180 (1444)
+++||+++||||||+|+++.+.+...+.||++.|++|++++++++.++++..+.++.++..++++|++|+|+|++.|+||
T Consensus 1122 ~~~~p~~~NPAd~~l~v~~~~~~~~~~~d~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R 1201 (1470)
T PLN03140 1122 VPKIKEKYNPATWMLEVSSLAAEVKLGIDFAEHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWK 1201 (1470)
T ss_pred CCCCCCCCCchhhhhhhhcccccccccchHHHHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHH
Confidence 88899999999999999987766666679999999999999998888888777666666666788999999999999999
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHhHhhccCCCCCCChHhHHHHHhHHHHHHHHHHHhhhhhcchhhhhhhhHHHhhh
Q 000524 1181 QHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREK 1260 (1444)
Q Consensus 1181 ~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~rE~ 1260 (1444)
+++++||||.|+.+|+++++++|+++|++||+++++..+++++++++|++|++++|+++.++++++|.+..||+||+|||
T Consensus 1202 ~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr 1281 (1470)
T PLN03140 1202 QWWTYWRSPDYNLVRFFFTLAAALMVGTIFWKVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRER 1281 (1470)
T ss_pred HHHHHHCCHhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998877789999999999999999999999999999999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhhhheeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 000524 1261 AAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIV 1340 (1444)
Q Consensus 1261 ~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~ 1340 (1444)
++|+|++.+|++|++++|+|+.++++++|++|+|||+||++++.+||||+++++++.++++++|+++++++||.++|+.+
T Consensus 1282 ~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~ 1361 (1470)
T PLN03140 1282 AAGMYSALPYAIAQVVCEIPYVLIQTTYYTLIVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIF 1361 (1470)
T ss_pred hcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCCcchhhhhhhhhcHHHHHHHHHHHHHhCCcccccC-C----CCcHHHHHHhhcCCccCchh
Q 000524 1341 STLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQME-N----GETVKHFLRDYFGFKHDFLG 1415 (1444)
Q Consensus 1341 ~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~-~----g~~~~~~~~~~~g~~~~~~~ 1415 (1444)
+++++++|++||||++|+++||+||+|+||+||++|+++|+++|||+|.+..|+ + ++++++|++++|||+++++|
T Consensus 1362 ~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~isp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 1441 (1470)
T PLN03140 1362 AAAFYGLFNLFSGFFIPRPKIPKWWVWYYWICPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMG 1441 (1470)
T ss_pred HHHHHHHHHHHeeeccChHHCchHHHHHHHcCHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCccccc
Confidence 999999999999999999999999999999999999999999999999887653 2 36899999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 000524 1416 LVAGVLTCFVALFGFVFALGIKQLNFQRR 1444 (1444)
Q Consensus 1416 ~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1444 (1444)
++++|+++|+++|++++++++|++|||||
T Consensus 1442 ~~~~il~~~~~~f~~~~~~~~~~~~~q~r 1470 (1470)
T PLN03140 1442 PVAAVLVGFTVFFAFIFAFCIRTLNFQTR 1470 (1470)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHhhcccC
Confidence 99999999999999999999999999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=8.3e-189 Score=1899.14 Aligned_cols=1290 Identities=31% Similarity=0.544 Sum_probs=1068.7
Q ss_pred cccHHHHHHHHHHHHhhcCCCCC--ccEEEEeceEEEEEEecCCCcCCChhHHHHHHHHHHHhhhccCCCccccceEeec
Q 000524 93 EVDNEKFLLKLKSRIDRVGIDLP--KVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKD 170 (1444)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~p--~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~ 170 (1444)
+.|++++++.++++.++.+...| +++|+|+||+|++ ...+....||++|.+.+.+..+...+. ..+++++++||+|
T Consensus 2 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~-~~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~ 79 (1394)
T TIGR00956 2 EFNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYG-VAADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKP 79 (1394)
T ss_pred CCCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEE-EeccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeC
Confidence 46788888877777777776666 9999999999999 444566789999998887775543321 1234456789999
Q ss_pred eeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-CCeecEEEECCccCCCCC--ccceEEEEcCCCCCCCCCCHHHHH
Q 000524 171 VSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS-LKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMTVRETL 247 (1444)
Q Consensus 171 vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~-~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l 247 (1444)
+|+.++|||+++|+||||||||||||+|+|+.++. ...+|+|.+||+++++.. .++.++||+|+|.|++++||+|||
T Consensus 80 vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l 159 (1394)
T TIGR00956 80 MDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETL 159 (1394)
T ss_pred CEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHH
Confidence 99999999999999999999999999999997432 125999999999875432 245699999999999999999999
Q ss_pred HHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccchh
Q 000524 248 AFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGG 327 (1444)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 327 (1444)
.|+++++.+..+.+ ...+.+ ..+..++.+++.+||++++||.||++.+++||||
T Consensus 160 ~f~~~~~~~~~~~~---~~~~~~-----------------------~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGG 213 (1394)
T TIGR00956 160 DFAARCKTPQNRPD---GVSREE-----------------------YAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGG 213 (1394)
T ss_pred HHHHHhCCCCCCCC---CCCHHH-----------------------HHHHHHHHHHHHcCcccccCceeCCCcCCCCCcc
Confidence 99988764221100 000000 0112356789999999999999999999999999
Q ss_pred hhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEEEec
Q 000524 328 ERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1444)
Q Consensus 328 qrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G 407 (1444)
|||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..+.|+|+++|||+++++++||+|++|++|+++|+|
T Consensus 214 erkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G 293 (1394)
T TIGR00956 214 ERKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFG 293 (1394)
T ss_pred cchHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEEC
Confidence 99999999999999999999999999999999999999999987667899999999999999999999999999999999
Q ss_pred ChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhhHHhhcCcccCc--
Q 000524 408 PRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRTPFDKS-- 485 (1444)
Q Consensus 408 ~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-- 485 (1444)
+++++.+||+++||+||++.|+|||+++++++.+++ ++...+. ....+.++++++|++++.++++.++++.+.++.
T Consensus 294 ~~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~~-~~~~~e~-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 371 (1394)
T TIGR00956 294 PADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAERQ-IKPGYEK-KVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSE 371 (1394)
T ss_pred CHHHHHHHHHHcCCCCCCCCChHHHHHhccChhhhh-ccccccc-cCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccc
Confidence 999999999999999999999999999999876432 2221111 123578899999999887776665544322110
Q ss_pred -------------ccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccc
Q 000524 486 -------------KSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLT 552 (1444)
Q Consensus 486 -------------~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~ 552 (1444)
...+.....+.|..++|+|++.|++|+++.++||+..++.++++.+++|+++|++|++.+.+ ..
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~---~~ 448 (1394)
T TIGR00956 372 SDTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKN---TS 448 (1394)
T ss_pred hhhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC---ch
Confidence 00011223456889999999999999999999999999999999999999999999976543 34
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCC
Q 000524 553 DGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPN 632 (1444)
Q Consensus 553 ~~~~~~g~lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~ 632 (1444)
+.+.+.|++|+++++.+|.++.++..++.+|++|+|||..++|++++|++|+.+.++|+.++.+++|++++|||+|+.++
T Consensus 449 ~~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~ 528 (1394)
T TIGR00956 449 DFYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRT 528 (1394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCccc
Confidence 56778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHH
Q 000524 633 AGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIV 712 (1444)
Q Consensus 633 ~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~ 712 (1444)
+++||.++++++++.+++.+++++++++++++.+|+.++++.++++++++||+++.++||+||+|++|+||+.|++++++
T Consensus 529 ~~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~ 608 (1394)
T TIGR00956 529 AGRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLM 608 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCcccccC--C----------------------CCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 000524 713 ANEFLGYSWKKFT--P----------------------NSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFT 768 (1444)
Q Consensus 713 ~nef~~~~~~~~~--~----------------------~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~ 768 (1444)
+|||.+..+.|.. | +.....|.++|.. ++.....|+|.+++++++++++|.++.+
T Consensus 609 ~nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~ 687 (1394)
T TIGR00956 609 VNEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYI 687 (1394)
T ss_pred HhhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHH
Confidence 9999999888741 1 1123578899985 3334456899999999999999999999
Q ss_pred HHHHHhcccCCCcccccccccccccccccccccccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCceeE
Q 000524 769 MAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLT 848 (1444)
Q Consensus 769 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 848 (1444)
++++|.++.......+..+........ ....+......+.++...... .. ...+.+.. ..............++
T Consensus 688 l~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~e~~~~~~~-~~--~~~~~~~~-~~~~~~~~~~~~~~l~ 761 (1394)
T TIGR00956 688 LLTEFNKGAKQKGEILVFRRGSLKRAK--KAGETSASNKNDIEAGEVLGS-TD--LTDESDDV-NDEKDMEKESGEDIFH 761 (1394)
T ss_pred HHHHhccccCCCCceEeeccccccchh--hcccccccccccccccccCCC-Cc--cccccccc-cccccccccCCCceEE
Confidence 999998855443322211110000000 000000000000000000000 00 00000000 0000000001123579
Q ss_pred EeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc-eEEEEEEEcCccCCc
Q 000524 849 FDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYPKKQ 927 (1444)
Q Consensus 849 ~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~ 927 (1444)
|+|++|.++.+ .+++.+|+|||++++|||++||||||||||||||++|+|+.+++ +.+|+|.+||.+...
T Consensus 762 ~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~~ 832 (1394)
T TIGR00956 762 WRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLDS 832 (1394)
T ss_pred EEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCh
Confidence 99999987532 12457999999999999999999999999999999999997654 356999999998753
Q ss_pred ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHH
Q 000524 928 ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRL 1007 (1444)
Q Consensus 928 ~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl 1007 (1444)
.+++.+|||+|+|.+++.+||+|+|.|++.+|.+...+.+++++.++++++.++|.+++|+.+|.++. +||||||||+
T Consensus 833 -~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgGqrqRl 910 (1394)
T TIGR00956 833 -SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVEQRKRL 910 (1394)
T ss_pred -hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHHHhhHH
Confidence 46778999999999999999999999999998876666777778899999999999999999987653 8999999999
Q ss_pred HHHHHHhhCCC-EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCCc
Q 000524 1008 TIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGR 1086 (1444)
Q Consensus 1008 ~ia~~L~~~p~-illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~~ 1086 (1444)
+||+||+.+|+ ||||||||||||+.++..|++.|++++++|+|||||+|||+..+++.||++++|++||+++|+|+.++
T Consensus 911 ~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 911 TIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 99999999997 99999999999999999999999999888999999999999778899999999999889999999999
Q ss_pred chhHHHHHHHhCCCcccCCCCCCccceEEEeccccchhhccccHHHHHHhcHHHHHHHHHHHHhcCCCCCCC---CCCCC
Q 000524 1087 HSCQLISYFEAIPGVEKIKDGYNPATWMLEVTASSQEVALGVDFNDIFRCSELYRRNKALIEELSKPTPGSK---DLYFP 1163 (1444)
Q Consensus 1087 ~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~~~ 1163 (1444)
+++++++||+++ |.++||+++|||||+||+++.+.+.....||.+.|++|++++++.+.++++..+..... +....
T Consensus 991 ~~~~~~~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1069 (1394)
T TIGR00956 991 NSHTIINYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDNDPDAL 1069 (1394)
T ss_pred ccchHHHHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCccccccccc
Confidence 989999999997 55679999999999999998765444456899999999998887766655443322111 11122
Q ss_pred CccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHhhccCCCCCCChHhHHHHHhHHHHHHHHHHHhhhh
Q 000524 1164 TQYSQSAFTQFMACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCS 1243 (1444)
Q Consensus 1164 ~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~ 1243 (1444)
++|++|+|+|++.|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|+++++.++.+ .
T Consensus 1070 ~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~~~~-~ 1145 (1394)
T TIGR00956 1070 SKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFNPLI-Q 1145 (1394)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 4789999999999999999999999999999999999999999999999986 47899999999999888877763 4
Q ss_pred hcchhhhhhhhHH-HhhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhheeeecccccccchhH-------HHHHHHHHHH
Q 000524 1244 SVQPVVSVERTVF-YREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEK-------FSWYFFFMYI 1315 (1444)
Q Consensus 1244 ~~~~~~~~er~vf-~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~-------f~~~~~~~~~ 1315 (1444)
+++|.+..||.+| +|||++|+|++.+|++|++++|+|+.++++++|++|+|||+||++++.+ |++|++++++
T Consensus 1146 ~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~~~~~~ 1225 (1394)
T TIGR00956 1146 QYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFWLLSTM 1225 (1394)
T ss_pred HhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHHHHHHH
Confidence 5667788888885 8999999999999999999999999999999999999999999988766 9999999999
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhcHHHHHHHHHHHHHhCCcccccC-
Q 000524 1316 TLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQME- 1394 (1444)
Q Consensus 1316 ~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~- 1394 (1444)
..++++++|+++++++||.++|+.+++++++++++||||++|+++||.||+|+||+||++|+++|++.|||+|.+..|.
T Consensus 1226 ~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~~~C~~ 1305 (1394)
T TIGR00956 1226 FFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVPVTCKV 1305 (1394)
T ss_pred HHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCeeecCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999987773
Q ss_pred ---------CCCcHHHHH-------------------------------HhhcCCccCchhhHHHHHHHHHHHHHHHHHH
Q 000524 1395 ---------NGETVKHFL-------------------------------RDYFGFKHDFLGLVAGVLTCFVALFGFVFAL 1434 (1444)
Q Consensus 1395 ---------~g~~~~~~~-------------------------------~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~ 1434 (1444)
+|+||++|+ ...+|+++++.|+|++|+++|++++ +++++
T Consensus 1306 ~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~~~~~~~~~~w~~~~i~~~~~~~~-~~~~~ 1384 (1394)
T TIGR00956 1306 KELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLEPISSKYSGRWRNFGIFIAFIFFN-IIATV 1384 (1394)
T ss_pred cccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHHHcCCcccccccchhhhhHHHHHH-HHHHH
Confidence 245665443 1346888999999999999999988 78888
Q ss_pred HHHhh
Q 000524 1435 GIKQL 1439 (1444)
Q Consensus 1435 ~l~~~ 1439 (1444)
++.+.
T Consensus 1385 ~l~~~ 1389 (1394)
T TIGR00956 1385 FFYWL 1389 (1394)
T ss_pred hhheE
Confidence 88765
No 4
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.1e-96 Score=922.25 Aligned_cols=574 Identities=31% Similarity=0.564 Sum_probs=504.5
Q ss_pred CceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc-eEEEEEEEcC
Q 000524 844 PHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISG 922 (1444)
Q Consensus 844 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g 922 (1444)
+..+.|+|+++..+.+.. ..+++|+||||+++|||++|||||||||||||||+|+||..++ ..+|+|++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvNG 94 (613)
T KOG0061|consen 23 PVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLNG 94 (613)
T ss_pred cceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEECC
Confidence 467899999998865421 3468999999999999999999999999999999999998764 7899999999
Q ss_pred ccCCcccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 923 YPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 923 ~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
++.+...+++.+|||+|+|.+.|++||+|+|.|+|.+|+|...+.++++++|+++++.+||.+++|+++|+++.+|+|||
T Consensus 95 ~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGG 174 (613)
T KOG0061|consen 95 RPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGG 174 (613)
T ss_pred ccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCccccc
Confidence 88888889999999999999999999999999999999999889999999999999999999999999999988999999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
|||||+||.+|+.||+||||||||||||+.++..++++|+++|++|||||||+||||.++|++||++++|.+ |+++|+|
T Consensus 175 ErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~G 253 (613)
T KOG0061|consen 175 ERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYSG 253 (613)
T ss_pred hhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEec
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997 6999999
Q ss_pred CCCcchhHHHHHHHhCCCcccCCCCCCccceEEEecccc-chhhccccHHHHHHh-------cHHHHHHHHHHHHhcCCC
Q 000524 1083 PLGRHSCQLISYFEAIPGVEKIKDGYNPATWMLEVTASS-QEVALGVDFNDIFRC-------SELYRRNKALIEELSKPT 1154 (1444)
Q Consensus 1083 ~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~-~~~~~~~~~~~~~~~-------s~~~~~~~~~~~~~~~~~ 1154 (1444)
+. +++.+||+++| . +||+++|||||++|+++.. .... -.+..+.++. ....+......+.+...
T Consensus 254 ~~----~~~~~ff~~~G-~-~~P~~~Npadf~l~l~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 325 (613)
T KOG0061|consen 254 SP----RELLEFFSSLG-F-PCPELENPADFLLDLLSVDSGTRE-LEEAVRIAKLINKFSQTDNLKKTLEALEKSLSTS- 325 (613)
T ss_pred CH----HHHHHHHHhCC-C-CCCCcCChHHHHHHHHccCCCchh-HHhHHHHHHHhhhccccchhhhhHHHHhhhcccc-
Confidence 97 68999999995 4 5999999999999998842 1100 0111111111 10111100001111111
Q ss_pred CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHhhccCCCCCCChHhHHHHHhHHHHHH
Q 000524 1155 PGSKDLYFPTQYSQSAFTQFMACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAI 1234 (1444)
Q Consensus 1155 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~ 1234 (1444)
++ .+.....+||.|++.+++|.+++.+|||.+...|+++.+++|+++|++||+++++ ..+++++.|++|+.+
T Consensus 326 ---~~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~---~~~~~~~~g~~~~~~ 397 (613)
T KOG0061|consen 326 ---KK--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGND---AKGIQNRLGLFFFIL 397 (613)
T ss_pred ---cc--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCc---hHHHHHHHHHHHHHH
Confidence 11 1111278999999999999999999999999999999999999999999999753 567779999999999
Q ss_pred HHHHHhhhhhcchhhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhheeeecccccccchhHHHHHHHHHH
Q 000524 1235 IFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMY 1314 (1444)
Q Consensus 1235 ~~~~~~~~~~~~~~~~~er~vf~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1314 (1444)
.++.+..+...++.|+.||++|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++..+|++|++.++
T Consensus 398 ~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~ 477 (613)
T KOG0061|consen 398 SFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIIL 477 (613)
T ss_pred HHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHH
Confidence 99988888888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhcHHHHHHHHHHHHHhCCcccccC
Q 000524 1315 ITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQME 1394 (1444)
Q Consensus 1315 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~ 1394 (1444)
+..+.++++|++++++.||...|..+++++...++||+||+++.++||.||+|++|+|+++|++||++.|||++....|.
T Consensus 478 ~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~ 557 (613)
T KOG0061|consen 478 LSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCF 557 (613)
T ss_pred HHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999997333332
Q ss_pred -C-----CCcHHHHHHhhcCCccCchhhHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 000524 1395 -N-----GETVKHFLRDYFGFKHDFLGLVAGVLTCFVALFGFVFALGIKQLNFQR 1443 (1444)
Q Consensus 1395 -~-----g~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~ 1443 (1444)
. ..+..+++. .++++.++.|.++.++++|+++|++++|+++++.-..+
T Consensus 558 ~~~~~~~~~~~~~~l~-~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~ 611 (613)
T KOG0061|consen 558 LSGNLCCESTGEDVLK-QLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRK 611 (613)
T ss_pred cCcCCcccccHHHHHH-hcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 1 235566664 58999999999999999999999999999999765544
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=3.9e-95 Score=922.94 Aligned_cols=563 Identities=29% Similarity=0.494 Sum_probs=500.8
Q ss_pred ceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc-eEEEEEEEcCccCCcccccceEEEEecCCCCCCCCcH
Q 000524 871 KLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYPKKQETFARISGYCEQNDIHSPFVTV 949 (1444)
Q Consensus 871 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv 949 (1444)
++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.+...+++.+|||+|+|.+++.+||
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV 116 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTV 116 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcH
Confidence 467999999999999999999999999999999999987543 3589999999987666677889999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC-CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000524 950 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1444)
Q Consensus 950 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~-~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsg 1028 (1444)
+||+.|++.++.+.....+++++.++++++.+||.+++|+.+|+++ .++||||||||++||+||+++|+||||||||+|
T Consensus 117 ~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsg 196 (617)
T TIGR00955 117 REHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSG 196 (617)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcc
Confidence 9999999999988777777888889999999999999999999864 679999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCcccCCCCC
Q 000524 1029 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPGVEKIKDGY 1108 (1444)
Q Consensus 1029 LD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~ 1108 (1444)
||+.++..+++.|++++++|+|||+++|||+.++++.||++++|++ |+++|.||. +++.+||+++| .+||++.
T Consensus 197 LD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~~-G~~v~~G~~----~~~~~~f~~~g--~~~p~~~ 269 (617)
T TIGR00955 197 LDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMAE-GRVAYLGSP----DQAVPFFSDLG--HPCPENY 269 (617)
T ss_pred hhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEeeC-CeEEEECCH----HHHHHHHHHcC--CCCCCCC
Confidence 9999999999999999988999999999999899999999999985 899999997 68899999995 3699999
Q ss_pred CccceEEEeccccchhh-----ccccHHHHHHhcHHHHHHHHHHHHhcCCCC---CCCCCCCCCccCCCHHHHHHHHHHH
Q 000524 1109 NPATWMLEVTASSQEVA-----LGVDFNDIFRCSELYRRNKALIEELSKPTP---GSKDLYFPTQYSQSAFTQFMACLWK 1180 (1444)
Q Consensus 1109 npad~~l~v~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~Q~~~l~~R 1180 (1444)
|||||++|+++...+.+ ...++.+.|++|+.+++..+.++....+.+ ........++|..++++|++.|++|
T Consensus 270 n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R 349 (617)
T TIGR00955 270 NPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKR 349 (617)
T ss_pred ChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHHH
Confidence 99999999987543221 113566777777766655444332211111 1111112346789999999999999
Q ss_pred HHHHHhcChHHHHHHHHHHHHHHHHHhHhhccCCCCCCChHhHHHHHhHHHHHHHHHHHhhhhhcchhhhhhhhHHHhhh
Q 000524 1181 QHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREK 1260 (1444)
Q Consensus 1181 ~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~rE~ 1260 (1444)
+++++||||.++.+|+++++++|+++|++||++++ ++++++++.|++|++++++++.++..+.+.++.||++|+||+
T Consensus 350 ~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~ 426 (617)
T TIGR00955 350 SWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRET 426 (617)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999975 467899999999999999998888788899999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhhhheeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 000524 1261 AAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIV 1340 (1444)
Q Consensus 1261 ~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~ 1340 (1444)
.+|+|++.+|++|++++|+|+.++.+++|++|+|||+|+++++.+||+|++++++..++++++|+++++++|+..+|..+
T Consensus 427 ~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~ 506 (617)
T TIGR00955 427 RSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALTV 506 (617)
T ss_pred cCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCCcchhhhhhhhhcHHHHHHHHHHHHHhCCccc-ccCCC-------CcHHHHHHhhcCCccC
Q 000524 1341 STLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVED-QMENG-------ETVKHFLRDYFGFKHD 1412 (1444)
Q Consensus 1341 ~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~-~~~~g-------~~~~~~~~~~~g~~~~ 1412 (1444)
+++++.++++|+||+++.++||+||+|++|+||++|++++++.|||++.+. +|.++ .+ ++++.+.||++.+
T Consensus 507 ~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~-g~~~l~~~g~~~~ 585 (617)
T TIGR00955 507 GPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSS-GEVILETLSFRNA 585 (617)
T ss_pred HHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcC-hHHHHHhcCCCcc
Confidence 999999999999999999999999999999999999999999999998775 56421 12 3566678999999
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 000524 1413 FLGLVAGVLTCFVALFGFVFALGIKQLNFQRR 1444 (1444)
Q Consensus 1413 ~~~~~~~il~~~~~~f~~~~~~~l~~~~~~~r 1444 (1444)
+.|.+++++++|+++|+++++++||+....+|
T Consensus 586 ~~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 586 DLYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999998766665
No 6
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=7.7e-95 Score=917.80 Aligned_cols=580 Identities=24% Similarity=0.397 Sum_probs=486.6
Q ss_pred CceeEEeceeeeeecchhh----------------hhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcC
Q 000524 844 PHSLTFDEVVYSVDMPQEM----------------KLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSG 907 (1444)
Q Consensus 844 ~~~~~~~~v~~~~~~~~~~----------------~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g 907 (1444)
+.++.|.|++|.++..... +...+..+++.+|+|||++++|||++||+|||||||||||++|+|
T Consensus 37 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG 116 (659)
T PLN03211 37 PITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAG 116 (659)
T ss_pred ceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhC
Confidence 5789999999998654210 000112345679999999999999999999999999999999999
Q ss_pred CCCCceEEEEEEEcCccCCcccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc
Q 000524 908 RKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI 987 (1444)
Q Consensus 908 ~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~ 987 (1444)
+..++..+|+|.+||.+.... .++.+|||+|++.+++.+||+|++.|++.++.+...+.+++++.++++++.+||.+++
T Consensus 117 ~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~ 195 (659)
T PLN03211 117 RIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKCE 195 (659)
T ss_pred CCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhc
Confidence 876544689999999886543 3456899999999999999999999998888765556666777899999999999999
Q ss_pred cccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcc
Q 000524 988 QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFD 1067 (1444)
Q Consensus 988 ~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD 1067 (1444)
|+.+|+...++||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.||
T Consensus 196 ~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D 275 (659)
T PLN03211 196 NTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFD 275 (659)
T ss_pred CceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhc
Confidence 99999888899999999999999999999999999999999999999999999999988899999999999978999999
Q ss_pred eEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCcccCCCCCCccceEEEeccccchhh------c---cccHHHHHHhcH
Q 000524 1068 ELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPGVEKIKDGYNPATWMLEVTASSQEVA------L---GVDFNDIFRCSE 1138 (1444)
Q Consensus 1068 ~v~ll~~gg~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~~npad~~l~v~~~~~~~~------~---~~~~~~~~~~s~ 1138 (1444)
++++|++ |+++|.|+. +++++||+++| . +||+++|||||++|+++...+.. . ..+..+.|+++.
T Consensus 276 ~iilL~~-G~iv~~G~~----~~~~~~f~~~G-~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 348 (659)
T PLN03211 276 SVLVLSE-GRCLFFGKG----SDAMAYFESVG-F-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTLL 348 (659)
T ss_pred eEEEecC-CcEEEECCH----HHHHHHHHHCC-C-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhhc
Confidence 9999985 799999997 68999999996 3 59999999999999987532110 0 011233443211
Q ss_pred HHHHHHHHHHH--hcC-CCC-----CCCCCC-CCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHh
Q 000524 1139 LYRRNKALIEE--LSK-PTP-----GSKDLY-FPTQYSQSAFTQFMACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGSL 1209 (1444)
Q Consensus 1139 ~~~~~~~~~~~--~~~-~~~-----~~~~~~-~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~ 1209 (1444)
.+...+.++. ... +.+ ..+... ....+..+||+|+++|++|++++ ||++.+..+|+++++++|+++|++
T Consensus 349 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~l 426 (659)
T PLN03211 349 -APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLM 426 (659)
T ss_pred -cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111 010 000 001100 11235678999999999999988 999999999999999999999999
Q ss_pred hccCCCCCCChHhHHHHHhHHHHHHHHHHHhhhhhcchhhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHhhh
Q 000524 1210 FWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVY 1289 (1444)
Q Consensus 1210 f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~vf~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~ 1289 (1444)
||+++ ..+++++.|++|++++++++.+++++++.++.||+||+|||++|+|++++|++|++++|+|+.++.+++|
T Consensus 427 f~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if 501 (659)
T PLN03211 427 WWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIF 501 (659)
T ss_pred HhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99984 4689999999999999988888888889999999999999999999999999999999999999999999
Q ss_pred heeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhh
Q 000524 1290 CVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYY 1369 (1444)
Q Consensus 1290 ~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~ 1369 (1444)
++|+|||+||++++.+||+|+++++++.++++++|+++++++||.++|+.++++++.++++|+||+++ +||+||+|++
T Consensus 502 ~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ 579 (659)
T PLN03211 502 LTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIK 579 (659)
T ss_pred HhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999997 7999999999
Q ss_pred hhcHHHHHHHHHHHHHhCCccc-----ccCCC----CcHHHHHHhhcCCccCchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 000524 1370 WANPVAWTLYGLIASQFGDVED-----QMENG----ETVKHFLRDYFGFKHDFLGLVAGVLTCFVALFGFVFALGIKQLN 1440 (1444)
Q Consensus 1370 ~isp~~y~~~~l~~~~~~~~~~-----~~~~g----~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~ 1440 (1444)
|+||++|++++++.|||++.+. .|+.. .....++. ..++++...|.++++|++|+++|++++|++|+++|
T Consensus 580 ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 580 YISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE-EDVAGQISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred HhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch-hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999987542 45311 11112332 23444557899999999999999999999999888
Q ss_pred c
Q 000524 1441 F 1441 (1444)
Q Consensus 1441 ~ 1441 (1444)
|
T Consensus 659 ~ 659 (659)
T PLN03211 659 H 659 (659)
T ss_pred C
Confidence 6
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=3.9e-92 Score=955.88 Aligned_cols=561 Identities=25% Similarity=0.410 Sum_probs=496.5
Q ss_pred CceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC--ceEEEEEEEcCccCCc--ccccceEEEEecCCCCCC
Q 000524 870 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--GYITGNITISGYPKKQ--ETFARISGYCEQNDIHSP 945 (1444)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~ 945 (1444)
.++.+|+|||+.++|||+++|+||||||||||||+|+|+..+ .+.+|+|.+||.+..+ ..+++.++|++|+|.|++
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 456799999999999999999999999999999999998632 2468999999987643 234567999999999999
Q ss_pred CCcHHHHHHHHHHhcCCC----CCCHHHHH-HHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEE
Q 000524 946 FVTVYESLLYSAWLRLPP----EVDSETRK-MFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1020 (1444)
Q Consensus 946 ~lTv~e~l~f~a~lr~~~----~~~~~~~~-~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il 1020 (1444)
.+||+|+|.|++.+|.|. ....+++. ..++++++.+||.+++|+.+|++.+++|||||||||+||++|+.+|+||
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 999999999999888653 23344433 3357799999999999999999889999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCCcchhHHHHHHHhCC
Q 000524 1021 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHSCQLISYFEAIP 1099 (1444)
Q Consensus 1021 lLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~~~~~~~~~yF~~~~ 1099 (1444)
||||||+|||+.++..+++.|++++++ |+|||+++|||+.++++.||++++|++ |+++|+||. +++.+||+++|
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~lG 306 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKMG 306 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHcC
Confidence 999999999999999999999999875 999999999998899999999999986 899999997 68999999995
Q ss_pred CcccCCCCCCccceEEEeccccch-------h---hccccHHHHHHhcHHHHHHHHHHHHhcCCC---------------
Q 000524 1100 GVEKIKDGYNPATWMLEVTASSQE-------V---ALGVDFNDIFRCSELYRRNKALIEELSKPT--------------- 1154 (1444)
Q Consensus 1100 g~~~~~~~~npad~~l~v~~~~~~-------~---~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~--------------- 1154 (1444)
. +||+++|||||++|+++++.+ . ....+|++.|++|+.++++.+.+++.....
T Consensus 307 -~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (1394)
T TIGR00956 307 -F-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVA 384 (1394)
T ss_pred -C-CCCCCCChHHHHHhccChhhhhccccccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHh
Confidence 3 699999999999999876431 1 123579999999999887766554321110
Q ss_pred CCCCCCCCCCccCCCHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHhhccCCCCCCChHhHHHHHhHHHHHH
Q 000524 1155 PGSKDLYFPTQYSQSAFTQFMACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAI 1234 (1444)
Q Consensus 1155 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~ 1234 (1444)
..++.....+.|..|+|+|+++|++|+++++||||.++.+|+++++++|+++|++||++++ ++++++++.|++|+++
T Consensus 385 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~ 461 (1394)
T TIGR00956 385 KQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAI 461 (1394)
T ss_pred hhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHH
Confidence 0011122334688999999999999999999999999999999999999999999999986 4578999999999999
Q ss_pred HHHHHhhhhhcchhhhhhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhheeeecccccccchhHHHHHHHHHH
Q 000524 1235 IFLGLQYCSSVQPVVSVERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMY 1314 (1444)
Q Consensus 1235 ~~~~~~~~~~~~~~~~~er~vf~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1314 (1444)
+++++.++..+ +.+..||+||+|||.+|+|++++|++|++++|+|+.++.+++|++|+|||+||++++.+||+|+++++
T Consensus 462 ~~~~~~~~~~i-~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~ 540 (1394)
T TIGR00956 462 LFNAFSSLLEI-ASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILF 540 (1394)
T ss_pred HHHHHHHHHHH-HHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHH
Confidence 99999887665 45567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhcHHHHHHHHHHHHHhCCcccccC
Q 000524 1315 ITLLLFTFYGMLTVAITPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQME 1394 (1444)
Q Consensus 1315 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~ 1394 (1444)
++.++++++|+++++++||..+|+.++++++.++++|+||++|.++||+||+|++|+||++|++++++.|||++.+.+|.
T Consensus 541 l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~ 620 (1394)
T TIGR00956 541 ICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECS 620 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998777662
Q ss_pred ----C---------------------C---CcHHHHHHhhcCCccCchhhHHHHHHHHHHHHHHHHHHHHHhhcc
Q 000524 1395 ----N---------------------G---ETVKHFLRDYFGFKHDFLGLVAGVLTCFVALFGFVFALGIKQLNF 1441 (1444)
Q Consensus 1395 ----~---------------------g---~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~ 1441 (1444)
. | .++.+|+...||++++++|+|++|+++|+++|++++++++++++.
T Consensus 621 ~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 621 QYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred ccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 0 1 156799988899999999999999999999999999999999873
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=5.7e-91 Score=938.91 Aligned_cols=590 Identities=23% Similarity=0.393 Sum_probs=501.0
Q ss_pred CCCceeEEeceeeeeecchh-----------------hh-hcc---ccCCceEEeeccEEEEeCCeEEEEecCCCCchHH
Q 000524 842 FEPHSLTFDEVVYSVDMPQE-----------------MK-LQG---VLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTT 900 (1444)
Q Consensus 842 ~~~~~~~~~~v~~~~~~~~~-----------------~~-~~~---~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTT 900 (1444)
.+...+.|+|+++..+.... .. ..+ ..+.++.+|+||||.++|||+++|+|||||||||
T Consensus 127 ~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKST 206 (1470)
T PLN03140 127 LPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTT 206 (1470)
T ss_pred CCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHH
Confidence 34567999999877652110 00 001 1223567999999999999999999999999999
Q ss_pred HHhhhcCCCCCc-eEEEEEEEcCccCCcccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCC-------CCHHHH--
Q 000524 901 LMDVLSGRKTGG-YITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPE-------VDSETR-- 970 (1444)
Q Consensus 901 Ll~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~-------~~~~~~-- 970 (1444)
||++|+|+.++. ..+|+|.+||.+..+...++.++||+|+|.|++.+||+|+|.|++.++.+.. ...+++
T Consensus 207 LLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~ 286 (1470)
T PLN03140 207 LLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDA 286 (1470)
T ss_pred HHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhc
Confidence 999999986542 4689999999987554446789999999999999999999999988764321 111111
Q ss_pred ----------------------HHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000524 971 ----------------------KMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1444)
Q Consensus 971 ----------------------~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsg 1028 (1444)
+..++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|++|||||||+|
T Consensus 287 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsG 366 (1470)
T PLN03140 287 GIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTG 366 (1470)
T ss_pred cCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcC
Confidence 1236789999999999999999998999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCcccCCCC
Q 000524 1029 LDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPGVEKIKDG 1107 (1444)
Q Consensus 1029 LD~~s~~~i~~~l~~~~~-~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~~~~~~~~~yF~~~~g~~~~~~~ 1107 (1444)
||+.++..+++.|+++++ .|+|||+++|||+.+++++||++++|++ |+++|+||. +++.+||+++| . +||++
T Consensus 367 LDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G~ivy~G~~----~~~~~yF~~lG-f-~cP~~ 439 (1470)
T PLN03140 367 LDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-GQIVYQGPR----DHILEFFESCG-F-KCPER 439 (1470)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-ceEEEeCCH----HHHHHHHHHcC-C-CCCCC
Confidence 999999999999999987 4899999999999899999999999985 899999997 68999999996 3 69999
Q ss_pred CCccceEEEeccccch-h-----------hccccHHHHHHhcHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCHHHHHH
Q 000524 1108 YNPATWMLEVTASSQE-V-----------ALGVDFNDIFRCSELYRRNKALIEELSKPTPGSKDLYFPTQYSQSAFTQFM 1175 (1444)
Q Consensus 1108 ~npad~~l~v~~~~~~-~-----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~ 1175 (1444)
+|||||++|+++.... . ....+|++.|++|+.+++..+.++.........+.....++|..++|.|++
T Consensus 440 ~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~ 519 (1470)
T PLN03140 440 KGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLK 519 (1470)
T ss_pred CChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHH
Confidence 9999999999986432 1 112468999999998877665443211111111111123468999999999
Q ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHhhccCCCCCCChHhHHHHHhHHHHHHHHHHHhhhhhcchhhhhhhhH
Q 000524 1176 ACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVSVERTV 1255 (1444)
Q Consensus 1176 ~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~~er~v 1255 (1444)
.|++|+++..||||.+...|+++.+++|+++|++||+++.+..+..+.+...|++|++++++.+.++.. ++.+..||+|
T Consensus 520 ~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~-l~~~~~~r~v 598 (1470)
T PLN03140 520 ACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAE-LALMIQRLPV 598 (1470)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccch
Confidence 999999999999999999999999999999999999998654445566788999999998888877655 4777889999
Q ss_pred HHhhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhheeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Q 000524 1256 FYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAITPNHH 1335 (1444)
Q Consensus 1256 f~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~ 1335 (1444)
|+|||.+++|++++|++|++++|+|+.++.+++|++|+|||+||++++++||.|+++++++.++++++++++++++|+..
T Consensus 599 f~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~ 678 (1470)
T PLN03140 599 FYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMI 678 (1470)
T ss_pred hHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhcHHHHHHHHHHHHHhCCcccc---cC-CC-CcHHHHHHhhcCCc
Q 000524 1336 IAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQ---ME-NG-ETVKHFLRDYFGFK 1410 (1444)
Q Consensus 1336 ~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~---~~-~g-~~~~~~~~~~~g~~ 1410 (1444)
+|+.++++++.++++|+||++|+++||+||+|++|+||++|+++++++|||.+.... |. .. .++.+|+ +.+|+.
T Consensus 679 ~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L-~~~g~~ 757 (1470)
T PLN03140 679 IANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVL-NIFDVF 757 (1470)
T ss_pred HHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHH-HhcCcC
Confidence 999999999999999999999999999999999999999999999999999765532 21 12 2455666 778997
Q ss_pred cC--chhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 000524 1411 HD--FLGLVAGVLTCFVALFGFVFALGIKQLN 1440 (1444)
Q Consensus 1411 ~~--~~~~~~~il~~~~~~f~~~~~~~l~~~~ 1440 (1444)
.+ +.|+++++|++|+++|+++++++|++++
T Consensus 758 ~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~ 789 (1470)
T PLN03140 758 TDKNWYWIGVGALLGFTILFNVLFTLALTYLN 789 (1470)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 54 5699999999999999999999999987
No 9
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=7e-86 Score=827.95 Aligned_cols=563 Identities=26% Similarity=0.474 Sum_probs=503.1
Q ss_pred CceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc-eEEEEEEEcCccCCcccccceEEEEecCCCCCCCCc
Q 000524 870 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYPKKQETFARISGYCEQNDIHSPFVT 948 (1444)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lT 948 (1444)
.+..+|+|+||.++||+++.++||+||||||||++|+|..+.. ...|+|.+||++.++..-++.++|+.|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3457999999999999999999999999999999999975432 235799999999776555788999999999999999
Q ss_pred HHHHHHHHHHhcCCCC----CCHHHHH-HHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000524 949 VYESLLYSAWLRLPPE----VDSETRK-MFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1023 (1444)
Q Consensus 949 v~e~l~f~a~lr~~~~----~~~~~~~-~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLD 1023 (1444)
|+|+|.|+++++.+.. .++.++. +..+.+++.+||++|+||+||+..++|+||||||||+||.+++++|+++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999998732 2222222 2578999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCcc
Q 000524 1024 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHSCQLISYFEAIPGVE 1102 (1444)
Q Consensus 1024 EPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~~~~~~~~~yF~~~~g~~ 1102 (1444)
|+|+|||+.|+.++.+.||++++. +.|+++++|||+.+++++||+|++|.+ |++||+||. .++++||+++|.
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~Gf-- 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDMGF-- 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhcCc--
Confidence 999999999999999999999865 899999999999999999999999997 899999998 588999999863
Q ss_pred cCCCCCCccceEEEeccccchh-----------hcc-ccHHHHHHhcHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCH
Q 000524 1103 KIKDGYNPATWMLEVTASSQEV-----------ALG-VDFNDIFRCSELYRRNKALIEELSKPTPGSKDLYFPTQYSQSA 1170 (1444)
Q Consensus 1103 ~~~~~~npad~~l~v~~~~~~~-----------~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1170 (1444)
.||+..++|||+.++++.-.+. ... .+|++.|.+|+.+++....++........++.....++|..|+
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~ 438 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPY 438 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccH
Confidence 6999999999999999832211 112 5799999999999887655433222222333334456899999
Q ss_pred HHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhHhhccCCCCCCChHhHHHHHhHHHHHHHHHHHhhhhhcchhhh
Q 000524 1171 FTQFMACLWKQHWSYWRNPQYTAVRFFFTAFIAVLLGSLFWDMGSKTRKSQDLFNAMGSMFTAIIFLGLQYCSSVQPVVS 1250 (1444)
Q Consensus 1171 ~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~~~~~~~ 1250 (1444)
|.|+++|+.|.++.+.||..|...++++.+++|+++|++|++... .+..+.+.+.|++||++++..+++++.+ +...
T Consensus 439 ~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi-~~~~ 515 (1391)
T KOG0065|consen 439 WEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEI-ALTF 515 (1391)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHH-HHHH
Confidence 999999999999999999999999999999999999999999983 5667899999999999999999888776 5566
Q ss_pred hhhhHHHhhhcCCCCChHHHHHHHHHHHHHHHHHHHhhhheeeecccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000524 1251 VERTVFYREKAAGMYSGLPWALAQAMIEIPYIFVQSVVYCVIVYAMMGYDWTAEKFSWYFFFMYITLLLFTFYGMLTVAI 1330 (1444)
Q Consensus 1251 ~er~vf~rE~~~~~Y~~~~y~~a~~l~eiP~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~ 1330 (1444)
+.|+||+|||...+|++++|.++..+.++|..++.+++|.+|+||++||.+++++||.|+++++++..++.+++++++++
T Consensus 516 ~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l 595 (1391)
T KOG0065|consen 516 QRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASL 595 (1391)
T ss_pred hhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcccccCCCCcchhhhhhhhhcHHHHHHHHHHHHHhCCcccccC-CC-------------
Q 000524 1331 TPNHHIAAIVSTLFYGIWYLFCGFVIPRPRIPVWWRWYYWANPVAWTLYGLIASQFGDVEDQME-NG------------- 1396 (1444)
Q Consensus 1331 ~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~w~~~isp~~y~~~~l~~~~~~~~~~~~~-~g------------- 1396 (1444)
+++..+|+.++++.+....+++||+||.++||+||+|++|+||+.|++++++.|||++.+.+|+ .|
T Consensus 596 ~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c 675 (1391)
T KOG0065|consen 596 SRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVC 675 (1391)
T ss_pred cchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999888884 11
Q ss_pred --------C---cHHHHHHhhcCCccCchhhHHHHHHHHHHHHHHHHHHHHHhhccc
Q 000524 1397 --------E---TVKHFLRDYFGFKHDFLGLVAGVLTCFVALFGFVFALGIKQLNFQ 1442 (1444)
Q Consensus 1397 --------~---~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~l~~~~~~ 1442 (1444)
. .+.+|++..|+|++.|.|++++|++||.++|.++..+++.|+|.-
T Consensus 676 ~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~ 732 (1391)
T KOG0065|consen 676 AATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL 732 (1391)
T ss_pred hhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 1 346788888999999999999999999999999999999999853
No 10
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.1e-80 Score=776.25 Aligned_cols=583 Identities=31% Similarity=0.505 Sum_probs=492.7
Q ss_pred CCccEEEEeceEEEEEEecCCCcCCChhHHHHHHHHHHHhhhccCCCccccceEeeceeeEEeCCeEEEEEcCCCCcHHH
Q 000524 114 LPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTT 193 (1444)
Q Consensus 114 ~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKST 193 (1444)
...++++|+|+++++... .+ ..+++|+||||.++|||++||+||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~----------------------------~~-~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK----------------------------SK-KTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC----------------------------CC-ccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 457889999999997542 11 4578999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhc
Q 000524 194 LLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEA 273 (1444)
Q Consensus 194 LL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 273 (1444)
||++|+|+.+++..++|+|++||++.+....++.+|||.|+|.++|++||+|||.|+++++.+.. ..
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~~------ 138 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------LS------ 138 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------CC------
Confidence 99999999987667899999999887766678899999999999999999999999999875431 11
Q ss_pred CCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCC
Q 000524 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTG 353 (1444)
Q Consensus 274 ~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsg 353 (1444)
.++.+.++|++++.|||.+|+||+||+...|||||||||||+||..|+.+|+||||||||||
T Consensus 139 ------------------~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 139 ------------------KEEKRERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred ------------------HHHHHHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 12234678999999999999999999998899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHH
Q 000524 354 LDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1444)
Q Consensus 354 LDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl 433 (1444)
||+.++.++++.|+++|+. |+|+|++||||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999986 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCcc--hhhhhhcccCCCCccCCHHHHHHHHHhCcchhhhHHhhcCcccCcccccccccccccCCchHHHHHHHHHH
Q 000524 434 QEVTSRK--DQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISR 511 (1444)
Q Consensus 434 ~~v~s~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R 511 (1444)
.++.+.. .+..... .......+.++......+.......... +. .........++|.|+..+.+|
T Consensus 280 l~l~s~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~s~~~q~~~L~~R 346 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEA--------VRIAKLINKFSQTDNLKKTLEALEKSLS----TS-KKVEIGTSPSWWTQFKILLKR 346 (613)
T ss_pred HHHHccCCCchhHHhH--------HHHHHHhhhccccchhhhhHHHHhhhcc----cc-cccccccCCcHHHHHHHHHHH
Confidence 9987743 1110000 0000011111100000000000000000 00 000011167899999999999
Q ss_pred HHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccccchhHHHHHHHHHHHHHHHHHH-HHHHHhhcchhHHhhh
Q 000524 512 ELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGALFFATAMVMFNGLA-EISMTIAKLPVFYKQR 590 (1444)
Q Consensus 512 ~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~lf~~~~~~~f~~~~-~~~~~~~~~~vf~k~r 590 (1444)
.+..+.|++.+...|.++.+.+++++|++|++.+... .......|++|+.+.+..|..+. .++.+..++++|.||+
T Consensus 347 ~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~---~~~~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE~ 423 (613)
T KOG0061|consen 347 SLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDA---KGIQNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRET 423 (613)
T ss_pred HhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCch---HHHHHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHH
Confidence 9999999999999999999999999999999874332 23346788999988888776665 5888899999999999
Q ss_pred cCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Q 000524 591 DFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTF 670 (1444)
Q Consensus 591 ~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~ 670 (1444)
..+.|+.++|++++.+.++|+.++.+++|.+++|||+|++++..+|+.+.++.++..+++.+++.+++++.++...|.++
T Consensus 424 ~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~~ 503 (613)
T KOG0061|consen 424 SSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATSL 503 (613)
T ss_pred hcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheeeh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHHHHhhcCCcccccCC--CCcccchHHHHhccCcccchhH
Q 000524 671 GTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTP--NSYESIGVQVLKSRGFFAHAYW 748 (1444)
Q Consensus 671 ~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~--~~~~~~g~~~L~~~~~~~~~~~ 748 (1444)
+++..+.+++++||+++.+.||.||.|+.|+|+..|++++++.|||.+....|... ..+...|.++++..++...+
T Consensus 504 ~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-- 581 (613)
T KOG0061|consen 504 GPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGNLCCESTGEDVLKQLGFEDSS-- 581 (613)
T ss_pred HHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcCCcccccHHHHHHhcCCcccc--
Confidence 99999999999999999999999999999999999999999999999744444332 34567788999998886654
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000524 749 YWLGLGALFGFILLFNLGFTMAITFLN 775 (1444)
Q Consensus 749 ~w~~~g~l~g~~v~f~~~~~~~l~~~~ 775 (1444)
.|.++.+++++.++|.++.++++++..
T Consensus 582 ~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 582 FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 468889999999999999999998864
No 11
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=1.5e-79 Score=780.18 Aligned_cols=569 Identities=27% Similarity=0.417 Sum_probs=482.1
Q ss_pred cccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCC
Q 000524 162 KKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 162 ~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1444)
+.++++|+|+|+.++|||+++|+|||||||||||++|+|+.+++...+|+|.+||++++....++.++||+|+|.+++++
T Consensus 35 ~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~l 114 (617)
T TIGR00955 35 RPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTL 114 (617)
T ss_pred cCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccC
Confidence 44577999999999999999999999999999999999998876556899999999886544567899999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc-
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM- 320 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~- 320 (1444)
||+|||.|+++++.+.... + .+...+++++++.+||++++||.||++.
T Consensus 115 TV~e~l~f~~~~~~~~~~~-------~------------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~~ 163 (617)
T TIGR00955 115 TVREHLMFQAHLRMPRRVT-------K------------------------KEKRERVDEVLQALGLRKCANTRIGVPGR 163 (617)
T ss_pred cHHHHHHHHHhcCCCCCCC-------H------------------------HHHHHHHHHHHHHcCchhcCcCccCCCCC
Confidence 9999999998876322100 0 0122357889999999999999999864
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
.++|||||||||+||++|+.+|+++||||||+|||+.++.++++.|+++++ .++|+|+++|||+.+++++||++++|++
T Consensus 164 ~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~~ 242 (617)
T TIGR00955 164 VKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMAE 242 (617)
T ss_pred CCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEeeC
Confidence 789999999999999999999999999999999999999999999999876 5789999999999999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhhHHhhcC
Q 000524 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1444)
Q Consensus 401 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (1444)
|+++|+|+++++.+||+++|++||++.|||||+.++++....... . .....+++.+.|+.+...++..+....
T Consensus 243 G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~~ 315 (617)
T TIGR00955 243 GRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTNL 315 (617)
T ss_pred CeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhhh
Confidence 999999999999999999999999999999999998865432110 0 112234566666665544443332221
Q ss_pred cccCcc---cccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccccchhH
Q 000524 481 PFDKSK---SHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIY 557 (1444)
Q Consensus 481 ~~~~~~---~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~ 557 (1444)
...... ..........|..+++.|+..+++|.++..+||+..+..++++.+++++++|++|++.+.+ ..+.+..
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~---~~~~~~~ 392 (617)
T TIGR00955 316 WSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLT---QKGVQNI 392 (617)
T ss_pred hhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCC---HHHHHHH
Confidence 111000 0001112345778999999999999999999999999999999999999999999976543 2345667
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCCHhHH
Q 000524 558 AGALFFATAMVMFNGL-AEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRF 636 (1444)
Q Consensus 558 ~g~lf~~~~~~~f~~~-~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~f 636 (1444)
.|++|+.++...|.++ ..+..+..++++|+||+..++|++++|++++.+.++|+.++.+++|.+++|||+|+++++++|
T Consensus 393 ~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f 472 (617)
T TIGR00955 393 NGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHF 472 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHH
Confidence 8999999888887765 446667789999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHHHHhh
Q 000524 637 FKQYLLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIVANEF 716 (1444)
Q Consensus 637 f~~~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef 716 (1444)
|.+++++++...++.++++++++++++..+|..++++..+++++|+||+++.++||+||+|++|+||+.|++++++.|||
T Consensus 473 ~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef 552 (617)
T TIGR00955 473 LTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQW 552 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcc-cccCCC---CcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000524 717 LGYSW-KKFTPN---SYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFL 774 (1444)
Q Consensus 717 ~~~~~-~~~~~~---~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~ 774 (1444)
.+..+ .|...+ .+...|.++|+.+|+... ++|.++++++++.++|.++.+++|++.
T Consensus 553 ~~~~~~~c~~~~~~~~c~~~g~~~l~~~g~~~~--~~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 553 SDVDNIECTSANTTGPCPSSGEVILETLSFRNA--DLYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred CCCccccccCcCcCCCCCcChHHHHHhcCCCcc--cHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98776 443211 133468999999998764 447899999999999999999999875
No 12
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=3.5e-79 Score=774.99 Aligned_cols=609 Identities=21% Similarity=0.340 Sum_probs=472.2
Q ss_pred CCccEEEEeceEEEEEEecCCCcCCChhHHHHHHHHHHHhhhccCCCccccceEeeceeeEEeCCeEEEEEcCCCCcHHH
Q 000524 114 LPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTT 193 (1444)
Q Consensus 114 ~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKST 193 (1444)
.+.++++|+|+++.+.......+...+ ...+..--...+ ...+..++++|+|+|+.++|||+++|+|||||||||
T Consensus 35 ~~~~~~~~~~~~y~~~~~~~~~~~~~~----~~~~~~~~~~~~-l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKST 109 (659)
T PLN03211 35 CYPITLKFMDVCYRVKFENMKNKGSNI----KRILGHKPKISD-ETRQIQERTILNGVTGMASPGEILAVLGPSGSGKST 109 (659)
T ss_pred CCceEEEEEeEEEEEccCCCccccccc----cccccccccccc-ccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHH
Confidence 458999999999997543101111110 000000000000 011223467999999999999999999999999999
Q ss_pred HHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhc
Q 000524 194 LLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEA 273 (1444)
Q Consensus 194 LL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~ 273 (1444)
||++|+|+++|+ ..+|+|.+||+++... .++.++||+|+|.+++.+||+||+.|++.++.... ..+
T Consensus 110 LL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~-------~~~----- 175 (659)
T PLN03211 110 LLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS-------LTK----- 175 (659)
T ss_pred HHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-------CCH-----
Confidence 999999998874 3589999999987532 23568999999999999999999999876542110 000
Q ss_pred CCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCC
Q 000524 274 GIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTG 353 (1444)
Q Consensus 274 ~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsg 353 (1444)
.+.+.+++++++.+||++++||.||+...++|||||||||+||++|+.+|++|||||||+|
T Consensus 176 -------------------~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsg 236 (659)
T PLN03211 176 -------------------QEKILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSG 236 (659)
T ss_pred -------------------HHHHHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCC
Confidence 0112346789999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHH
Q 000524 354 LDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1444)
Q Consensus 354 LDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl 433 (1444)
||+.++.++++.|+++++ .++|+|+++|||..+++++||+|++|++|+++|+|+.+++.+||+++||+||++.|||||+
T Consensus 237 LD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf~ 315 (659)
T PLN03211 237 LDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADFL 315 (659)
T ss_pred cCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence 999999999999999876 5789999999988889999999999999999999999999999999999999999999999
Q ss_pred HhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhhHHhhcC---cccCcc-----cccc-cccccccCCchHHH
Q 000524 434 QEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT---PFDKSK-----SHRA-ALTTEVYGAGKREL 504 (1444)
Q Consensus 434 ~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~-----~~~~-~~~~~~y~~s~~~~ 504 (1444)
.++.+...+.+.....+.+ ...+++.+.|++... ....+..+. ...... ..+. ......+..++|.|
T Consensus 316 ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q 391 (659)
T PLN03211 316 LDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQ 391 (659)
T ss_pred HHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHH
Confidence 9998764321100000111 112334444432211 111111100 000000 0000 00112345789999
Q ss_pred HHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccccchhHHHHHHHHHHHHHH-HHHHHHHHHhhcc
Q 000524 505 LKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGALFFATAMVMF-NGLAEISMTIAKL 583 (1444)
Q Consensus 505 ~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~lf~~~~~~~f-~~~~~~~~~~~~~ 583 (1444)
+..+++|.++. +|+..+...|+++.+++|+++|++|++.+ ..+.+...|++||.+++..+ ..+..++.+..+|
T Consensus 392 ~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er 465 (659)
T PLN03211 392 FSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQER 465 (659)
T ss_pred HHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999888 78888888999999999999999999653 23567788999999877555 5567888888999
Q ss_pred hhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Q 000524 584 PVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRS 663 (1444)
Q Consensus 584 ~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~~ 663 (1444)
++|+|||..++|++++|++|+.+.++|+.++.+++|.+++|||+|+.+++++||.+++++++..+++.++++++++++++
T Consensus 466 ~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~ 545 (659)
T PLN03211 466 AIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMD 545 (659)
T ss_pred HHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHHHHhhcCCc-----ccccCCCCcccchHHHHh
Q 000524 664 MVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIVANEFLGYS-----WKKFTPNSYESIGVQVLK 738 (1444)
Q Consensus 664 ~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~-----~~~~~~~~~~~~g~~~L~ 738 (1444)
+..|+.++++..+++++|+||+++ +||+||+|++|+||+.|+++++++|||.+.+ ..|..+......+..++.
T Consensus 546 ~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~~ 623 (659)
T PLN03211 546 AKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFVE 623 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccch
Confidence 999999999999999999999997 7999999999999999999999999997643 234322111111111222
Q ss_pred ccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000524 739 SRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLN 775 (1444)
Q Consensus 739 ~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~ 775 (1444)
...+. ....|.+++++++++++|+++.+++|++.+
T Consensus 624 ~~~~~--~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 624 EDVAG--QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhc--ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222 234678889999999999999999997653
No 13
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.4e-75 Score=732.91 Aligned_cols=783 Identities=22% Similarity=0.275 Sum_probs=424.4
Q ss_pred CCCccccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCC
Q 000524 158 LPSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQH 234 (1444)
Q Consensus 158 ~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~ 234 (1444)
+|+|+ +..||+|+|+.|++|+.++|+|||||||||++++|.+.++|+ +|+|.++|+++.+++. +..+|.|+|+
T Consensus 360 YPsRp-dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~Qe 435 (1228)
T KOG0055|consen 360 YPSRP-DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQE 435 (1228)
T ss_pred CCCCC-cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeec
Confidence 35554 577999999999999999999999999999999999999998 9999999999988765 4789999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccc
Q 000524 235 DNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1444)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1444)
|.+|. .||+|||.|+.. |...++..+|+... +..--+..|++..||
T Consensus 436 PvlF~-~tI~eNI~~G~~-------------------------dat~~~i~~a~k~a--------na~~fi~~lp~g~~T 481 (1228)
T KOG0055|consen 436 PVLFA-TTIRENIRYGKP-------------------------DATREEIEEAAKAA--------NAHDFILKLPDGYDT 481 (1228)
T ss_pred hhhhc-ccHHHHHhcCCC-------------------------cccHHHHHHHHHHc--------cHHHHHHhhHHhhcc
Confidence 97665 699999998631 22222222222111 111123457889999
Q ss_pred cccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCe
Q 000524 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1444)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1444)
.||++++ .|||||||||+|||||+.+|+|||||||||+||+.+...+.+.|++.. .|+|+|+ +.|..+.+-+ +|+
T Consensus 482 ~vge~g~-qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~--~grTTiv-VaHRLStIrn-aD~ 556 (1228)
T KOG0055|consen 482 LVGERGV-QLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKAS--KGRTTIV-VAHRLSTIRN-ADK 556 (1228)
T ss_pred cccCCCC-CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhh--cCCeEEE-Eeeehhhhhc-cCE
Confidence 9999877 499999999999999999999999999999999999999999998864 4677777 4555555555 999
Q ss_pred EEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHH--HhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCc---
Q 000524 395 IILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL--QEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFH--- 469 (1444)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl--~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 469 (1444)
|++|++|+||+.|+++|++..= | -.++.+ |+....++. ..+ ++. ..++.....+.+.
T Consensus 557 I~v~~~G~IvE~G~h~ELi~~~---G-------~Y~~lv~~Q~~~~~~~~-~~~---~~~----~~~~~~~s~~~s~~~~ 618 (1228)
T KOG0055|consen 557 IAVMEEGKIVEQGTHDELIALG---G-------IYSSLVRLQELEKAAED-EEE---EES----LKEERSRSLKSSSSSP 618 (1228)
T ss_pred EEEEECCEEEEecCHHHHHhcc---c-------hHHHHHHHHhhhhhhhc-ccc---ccc----hhhhhhhccccccccc
Confidence 9999999999999999998620 1 011111 111111110 000 000 0000000000000
Q ss_pred -chhh-hHHhhc--CcccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHH-------HHHHHHH
Q 000524 470 -VGQK-ISDELR--TPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQIS-------SVALAFM 538 (1444)
Q Consensus 470 -~~~~-~~~~l~--~~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~-------~~ali~g 538 (1444)
..+. ...... .+.+.....+ ........+++ |-+.+.+.++.+.+.-.+..+ +.+++++
T Consensus 619 ~~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~~~s~~--------~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s 688 (1228)
T KOG0055|consen 619 SLSRGSNRSNLLSVKPEGEDPEEP--VSEEDEKVSFW--------RIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFS 688 (1228)
T ss_pred cccCCccccccccccccccccccc--cccccccccHH--------HHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHH
Confidence 0000 000000 0000000000 00011122333 333444444444443333332 2333333
Q ss_pred HhhhccccCC-CccccchhHHHHHHHHHHHHHH--H--------HHHHHHHHhhcchhHHh--hhcCCccChhhhHHHHH
Q 000524 539 TLFLRTKMHK-HSLTDGGIYAGALFFATAMVMF--N--------GLAEISMTIAKLPVFYK--QRDFRFFPPWAYAIPSW 605 (1444)
Q Consensus 539 tlf~~~~~~~-~~~~~~~~~~g~lf~~~~~~~f--~--------~~~~~~~~~~~~~vf~k--~r~~~~y~~~ay~la~~ 605 (1444)
.++-...... +........+.++|.++....+ + -..+....-.+...|.+ ..+..||.---.. +..
T Consensus 689 ~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l 767 (1228)
T KOG0055|consen 689 QVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GAL 767 (1228)
T ss_pred HHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHH
Confidence 3322111111 1111122234555544433222 1 11111111112222222 1122233111111 111
Q ss_pred HHHhhHHHHHHHHHHhhhhhccccCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH------HH
Q 000524 606 ILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLV------LF 679 (1444)
Q Consensus 606 l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~------~~ 679 (1444)
..++- .++.. +--++..-...+...++++.-.+.+|...++=+.++ ++
T Consensus 768 ~~RLa--------------------~Da~~------vr~~v~~rl~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll 821 (1228)
T KOG0055|consen 768 SSRLA--------------------TDASN------VRAAVGDRLSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLL 821 (1228)
T ss_pred HHHHh--------------------cchHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11110 00000 000111111222233333334444444444433222 22
Q ss_pred HHhccccCccchhhhHHHHHHHc---HHHHHHHHHHHHhhcCCcccccCCCCcccchHHHHhccC-----cc--cchhHH
Q 000524 680 ALGGFVLSREDIKKWWKWAYWCS---PMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLKSRG-----FF--AHAYWY 749 (1444)
Q Consensus 680 l~~Gf~i~~~~ip~~~~w~~~is---p~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~-----~~--~~~~~~ 749 (1444)
.++++.-. +++.-.+ --.|...+.+.+|-....-... .......++..+. .. ......
T Consensus 822 ~~~~~~~~--------~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~----al~~e~~~~~~y~~~l~~p~~~~~~~~~ 889 (1228)
T KOG0055|consen 822 ILSGYLQK--------KFLKGFSKDDKKAYEEASKIAIEAVSNIRTVA----ALCAEEKFMELYKEELEKPRKSSFKRGL 889 (1228)
T ss_pred HHHHHHHH--------HHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHH----HHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222110 0000000 0001111111111111000000 0000000110000 00 000112
Q ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHhcccCCCccccccccccc----c-cccccccccccccCCCCCCcccCCCCCcc
Q 000524 750 WLGLGALFGFILL---FNLGFTMAITFLNQLEKPRAVITEESESN----K-QDNRIRGTVQLSARGESGEDISGRNSSSK 821 (1444)
Q Consensus 750 w~~~g~l~g~~v~---f~~~~~~~l~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (1444)
|.+++.-+...+. +.+.++.+...... ........... . ............++...+...... .-
T Consensus 890 i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~----g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~---iF 962 (1228)
T KOG0055|consen 890 ISGLGFGFSQSLLFFVYALSFWYGARLISN----GEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGS---IF 962 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHH---HH
Confidence 2222221111111 12222222222211 00000000000 0 000000000000000000000000 00
Q ss_pred hhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHH
Q 000524 822 SLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTL 901 (1444)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTL 901 (1444)
...+..+..+.....+...|.....++|+||+|+|+..+ ..+||+|+|+++++|+.+||+|||||||||.
T Consensus 963 ~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP----------~~~Il~~l~l~i~~GqTvALVG~SGsGKSTv 1032 (1228)
T KOG0055|consen 963 EILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRP----------DVPVLNNLSLSIRAGQTVALVGPSGSGKSTV 1032 (1228)
T ss_pred HHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCC----------CchhhcCCcEEecCCCEEEEECCCCCCHHHH
Confidence 000000100111112223444456799999999998643 4679999999999999999999999999999
Q ss_pred HhhhcCCCCCceEEEEEEEcCccCCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Q 000524 902 MDVLSGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVM 978 (1444)
Q Consensus 902 l~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l 978 (1444)
+.+|-+..+ +..|.|.|||.+++. ...|+.+|.|.|+|.+|. -|++||+.|+. . +.+.++ +.+++
T Consensus 1033 I~LLeRfYd--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG~----~-~vs~~e----Ii~Aa 1100 (1228)
T KOG0055|consen 1033 ISLLERFYD--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYGS----E-EVSEEE----IIEAA 1100 (1228)
T ss_pred HHHHHHhcC--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhccC----C-CCCHHH----HHHHH
Confidence 999986544 568999999998766 346789999999999985 79999999981 1 133322 45555
Q ss_pred HHc-------CCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEE
Q 000524 979 ELV-------ELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTV 1051 (1444)
Q Consensus 979 ~~l-------~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tv 1051 (1444)
+.. +|.+-.||.||..|. .||||||||++|||||++||+||+|||+||.||+++.+.|+++|.+. ..|||.
T Consensus 1101 k~ANaH~FI~sLP~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a-~~gRT~ 1178 (1228)
T KOG0055|consen 1101 KLANAHNFISSLPQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRA-MEGRTT 1178 (1228)
T ss_pred HHhhhHHHHhcCcCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHh-hcCCcE
Confidence 543 566778999998764 79999999999999999999999999999999999999999999986 469999
Q ss_pred EEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1052 VCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1052 i~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|+++|++| ..+.+|.|.++++ |++++.|.-
T Consensus 1179 IvIAHRLS--TIqnaD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1179 IVIAHRLS--TIQNADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred EEEecchh--hhhcCCEEEEEEC-CEEEecccH
Confidence 99999986 6788999999985 899999973
No 14
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.1e-70 Score=707.11 Aligned_cols=772 Identities=20% Similarity=0.235 Sum_probs=435.6
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCCHHH
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRE 245 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1444)
+.|+|||+.|++|+++||+||.||||||||.+|.|+++.. +|+|.++| .++||||+++ +.+.||||
T Consensus 535 ~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~g----------siaYv~Q~pW-I~ngTvre 600 (1381)
T KOG0054|consen 535 PTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNG----------SVAYVPQQPW-IQNGTVRE 600 (1381)
T ss_pred ccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcC----------eEEEeccccH-hhCCcHHH
Confidence 3899999999999999999999999999999999999875 99999999 5899999985 55679999
Q ss_pred HHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccc
Q 000524 246 TLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGIS 325 (1444)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1444)
||.|+..+. ..||+.+.+.|.+++|.+++|++| .|.||++++ +||
T Consensus 601 NILFG~~~d--~~rY~~Vi~aC~L~~Dle~Lp~GD--------------------------------~TeIGErGi-nLS 645 (1381)
T KOG0054|consen 601 NILFGSPYD--EERYDKVIKACALKKDLEILPFGD--------------------------------LTEIGERGI-NLS 645 (1381)
T ss_pred hhhcCcccc--HHHHHHHHHHccCHhHHhhcCCCC--------------------------------cceecCCcc-CCc
Confidence 999998765 479999999999999999999998 499999888 799
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHH-HHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000524 326 GGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVN-CLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1444)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~-~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv 404 (1444)
|||||||++|||++++++|++||+|.|++|+++..+|++ +++.+. .++|+|+. +| .-+....+|.|++|++|+|+
T Consensus 646 GGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L--~~KT~ILV-TH-ql~~L~~ad~Iivl~~G~I~ 721 (1381)
T KOG0054|consen 646 GGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLL--RGKTVILV-TH-QLQFLPHADQIIVLKDGKIV 721 (1381)
T ss_pred HhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhh--cCCEEEEE-eC-chhhhhhCCEEEEecCCeEe
Confidence 999999999999999999999999999999999999996 786543 34666664 44 45678889999999999999
Q ss_pred EecChhhHHH---HHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhhHHhhcCc
Q 000524 405 YQGPRELVLE---FFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRTP 481 (1444)
Q Consensus 405 ~~G~~~~~~~---~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 481 (1444)
..|+++|+.+ .|+.+ ...++ ..++.. ...+.+.......+. +. +.........+. ...
T Consensus 722 ~~Gty~el~~~~~~~~~l-~~~~~------------~~~~~~---~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~-~~~ 782 (1381)
T KOG0054|consen 722 ESGTYEELLKSGGDFAEL-AHEEE------------SEQEEE---ASEKDLESGESSRES-ES-RSLESLSSEEEK-SKD 782 (1381)
T ss_pred cccCHHHHHhcchhHHHH-hhccc------------hhhccc---cccccccccccccch-hh-hhhhhhcccccc-ccc
Confidence 9999999984 33332 00000 000000 000000000000000 00 000000000000 000
Q ss_pred ccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHH-HHHHHH-HHHHHHHHHhhhccccCCCc--c---ccc
Q 000524 482 FDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYI-FKLTQI-SSVALAFMTLFLRTKMHKHS--L---TDG 554 (1444)
Q Consensus 482 ~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~-~~~~~~-~~~ali~gtlf~~~~~~~~~--~---~~~ 554 (1444)
....+...........+.-.|...+. +........... +-+... ..+..+.+..|+..+.+... . .+.
T Consensus 783 ~~~~~~~~~~~ee~~~G~v~~~vY~~-----Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~ 857 (1381)
T KOG0054|consen 783 EKEEEDKLVQEEERETGKVSWSVYKK-----YIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVST 857 (1381)
T ss_pred ccchhhHHHHHHHHhcCEeeHHHHHH-----HHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccCCCc
Confidence 00000000000000011111111111 111101111111 111111 12223333444443333221 0 122
Q ss_pred hhHHHH----HHHHHHHHHHHHHHHHHHHh-hcchh---------------HHhhhcCCccChhhhHHHHHHHHhhHHHH
Q 000524 555 GIYAGA----LFFATAMVMFNGLAEISMTI-AKLPV---------------FYKQRDFRFFPPWAYAIPSWILKIPISFL 614 (1444)
Q Consensus 555 ~~~~g~----lf~~~~~~~f~~~~~~~~~~-~~~~v---------------f~k~r~~~~y~~~ay~la~~l~~iP~~~~ 614 (1444)
..|.+. .+...+..++.++......+ ..+.+ |......+....++-.+......+|..+.
T Consensus 858 ~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~ 937 (1381)
T KOG0054|consen 858 SFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLE 937 (1381)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCCCccchhhhcccchHHHHHhhHHHHH
Confidence 223221 11111122222211111111 11111 11112222233344556666666666554
Q ss_pred HHHHHHhhhhhccccCCCHh-HHHHHHHHHHHHHH-------HHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccc
Q 000524 615 EVAVWVFLTYYVIGCDPNAG-RFFKQYLLFLAVNQ-------MASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVL 686 (1444)
Q Consensus 615 ~~~i~~~i~Y~~~g~~~~~~-~ff~~~l~~~l~~~-------~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i 686 (1444)
..+...+.+-..++...-+. .|+...+.+.+... .++.-.+-+.++++++..+++..++.++..+-..|-
T Consensus 938 ~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~-- 1015 (1381)
T KOG0054|consen 938 FFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGK-- 1015 (1381)
T ss_pred HHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccc--
Confidence 43322211111111111111 11111111111111 122223446677788887777777766654422110
Q ss_pred CccchhhhHHHHHHHcH-HHHHHHHHHHHhhcCCcccccCCCCc-ccchHHHHhccCcccchhHHHHHHHHHHHHHHHHH
Q 000524 687 SREDIKKWWKWAYWCSP-MSYAQNAIVANEFLGYSWKKFTPNSY-ESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFN 764 (1444)
Q Consensus 687 ~~~~ip~~~~w~~~isp-~~y~~~al~~nef~~~~~~~~~~~~~-~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~ 764 (1444)
...-+.... .+++- ...-+-....|++.+.+.+....-.. ......++..-+.. -..++|+.+.+.
T Consensus 1016 ~~rf~~~~~---~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~~---------~~g~vGLslsya 1083 (1381)
T KOG0054|consen 1016 EERFIQEND---ELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPSGLI---------SPGLVGLSLSYA 1083 (1381)
T ss_pred cHHHHHHHH---HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC---------CcchHHHHHHHH
Confidence 000000000 00000 00000001111111111110000000 00000000000000 012344444444
Q ss_pred HHHHHHHHHhcccCCCcccccccccccccccccccccccccCCCCCCcccCCCCCcchhhhhcccCCCCC-ccCcccCCC
Q 000524 765 LGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPK-KRGMILPFE 843 (1444)
Q Consensus 765 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 843 (1444)
+..+..+.+.-.. ..+.+....+.++...+.... .+.+...+. +.+..+| .
T Consensus 1084 l~lt~~l~~~vR~----------------------~~elEn~m~SVERv~eY~~~~-----~E~p~~~~~~~pp~~WP-~ 1135 (1381)
T KOG0054|consen 1084 LQLTGLLQWLVRQ----------------------SSELENNMVSVERVLEYTDIP-----SEAPLEIEESRPPPSWP-S 1135 (1381)
T ss_pred HHHHHHHHHHHHH----------------------HHHHHhcchhhhHHHHHhcCC-----CCCCCCCcCCCCCCCCC-C
Confidence 4333333332110 000000111111111000000 000000000 1111222 2
Q ss_pred CceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCc
Q 000524 844 PHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGY 923 (1444)
Q Consensus 844 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~ 923 (1444)
...++|+|++..|.. +-..+|||||+.|+|||++||+|++|||||||+++|.+... +.+|+|.|||.
T Consensus 1136 ~G~I~f~~~~~RYrp-----------~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e--~~~G~I~IDgv 1202 (1381)
T KOG0054|consen 1136 KGEIEFEDLSLRYRP-----------NLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVE--PAEGEILIDGV 1202 (1381)
T ss_pred CCeEEEEEeEEEeCC-----------CCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcC--ccCCeEEEcCe
Confidence 357999998877642 22469999999999999999999999999999999998765 35899999999
Q ss_pred cCCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc------CC
Q 000524 924 PKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVG------LP 994 (1444)
Q Consensus 924 ~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg------~~ 994 (1444)
++.+ ...|++++.+|||+.+|. -|+|.|| |+..+..++.+|++||..+|.+...++.+ .+
T Consensus 1203 dI~~igL~dLRsrlsIIPQdPvLFs-GTvR~NL----------DPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~e 1271 (1381)
T KOG0054|consen 1203 DISKIGLHDLRSRLSIIPQDPVLFS-GTVRFNL----------DPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSE 1271 (1381)
T ss_pred ecccccHHHHHhcCeeeCCCCceec-Ccccccc----------CcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecC
Confidence 9876 356888999999998874 4666665 66667777889999999999887655543 24
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
++.++|.||||.+|+||||+++++||+|||+|+++|++|...|+++||+..+ +||||++.|+.+ ....+|||+||++
T Consensus 1272 gG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl~--TVmd~DrVlVld~ 1348 (1381)
T KOG0054|consen 1272 GGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRLN--TVMDSDRVLVLDA 1348 (1381)
T ss_pred CCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeeccc--hhhhcCeEEEeeC
Confidence 5689999999999999999999999999999999999999999999999764 799999999976 4556799999996
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++++|.+
T Consensus 1349 -G~v~EfdsP 1357 (1381)
T KOG0054|consen 1349 -GRVVEFDSP 1357 (1381)
T ss_pred -CeEeecCCh
Confidence 899999987
No 15
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=4.1e-68 Score=715.13 Aligned_cols=223 Identities=28% Similarity=0.403 Sum_probs=192.1
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|+++.++. +++.+|+|||+.|++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 1937 ~L~v~nLsK~Y~~-----------~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYSG-----------TSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEECC-----------CCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEEC
Confidence 4889999877741 124699999999999999999999999999999999998763 489999999886
Q ss_pred Cc--ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000524 926 KQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 1003 (1444)
Q Consensus 926 ~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1003 (1444)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. .+.++.++.++++++.++|.+..|+.+ +.|||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g---~~~~~~~~~v~~lLe~lgL~~~~dk~~-----~~LSGGq 2075 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRG---VPAEEIEKVANWSIQSLGLSLYADRLA-----GTYSGGN 2075 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHhcCCh-----hhCCHHH
Confidence 43 2245679999999999999999999998777653 233444566889999999999888875 5799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1004 rkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
||||+||+||+.+|+||||||||+|||+.+++.+++.|++++++|+|||+|+|+++ ++..+|||+++|++ |++++.|+
T Consensus 2076 KqRLslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs 2153 (2272)
T TIGR01257 2076 KRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGT 2153 (2272)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999878999999999986 78889999999985 89999998
Q ss_pred CCcchhHHHHHH
Q 000524 1084 LGRHSCQLISYF 1095 (1444)
Q Consensus 1084 ~~~~~~~~~~yF 1095 (1444)
. +++..-|
T Consensus 2154 ~----q~Lk~~~ 2161 (2272)
T TIGR01257 2154 I----QHLKSKF 2161 (2272)
T ss_pred H----HHHHHHh
Confidence 6 4555444
No 16
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.4e-65 Score=703.23 Aligned_cols=211 Identities=23% Similarity=0.312 Sum_probs=179.2
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++|+||+++|+. +...+|+|||++|+|||++||+|+||||||||+++|.|...+ .+|+|.|||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~p--~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVEL--ERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECCEe
Confidence 46999999999852 123599999999999999999999999999999999997653 48999999998
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 994 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1444)
+.+ ..+|+.++||||++.++. -|++|||.+.. .. .++.++++++..++.+. .|+.+|..
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~-GTIreNLd~~~------~~----tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~ 1371 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFS-GTVRFNLDPFN------EH----NDADLWESLERAHLKDVIRRNSLGLDAEVSEA 1371 (1622)
T ss_pred cccCCHHHHHhccEEECCCCcccc-ccHHHHhCcCC------CC----CHHHHHHHHHHcCcHHHHHhCccccCccccCC
Confidence 765 356788999999999986 49999996531 11 23447888988888654 35556553
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
..+||||||||++|||||+++|+||+||||||+||+++++.|+++|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1372 -G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~ 1447 (1622)
T PLN03130 1372 -GENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA 1447 (1622)
T ss_pred -CCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC
Confidence 46899999999999999999999999999999999999999999999985 4899999999985 4667999999996
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 1448 -G~IvE~Gt~ 1456 (1622)
T PLN03130 1448 -GRVVEFDTP 1456 (1622)
T ss_pred -CEEEEeCCH
Confidence 899999986
No 17
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.9e-66 Score=709.64 Aligned_cols=211 Identities=22% Similarity=0.285 Sum_probs=178.9
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++|+||+++|+. +.+.+|+|+|++|+|||++||+|+||||||||+++|.|..++ .+|+|.|||.+
T Consensus 1233 g~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p--~~G~I~IdG~d 1299 (1495)
T PLN03232 1233 GSIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEL--EKGRIMIDDCD 1299 (1495)
T ss_pred CcEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcC--CCceEEECCEE
Confidence 36999999999842 123599999999999999999999999999999999997663 58999999998
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 994 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 994 (1444)
+.+ ..+|+.++||||++.+++ -|++|||.+.. +. .++.++++++..++.+.. |+.+|..
T Consensus 1300 i~~i~~~~lR~~i~iVpQdp~LF~-gTIr~NL~~~~------~~----sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1368 (1495)
T PLN03232 1300 VAKFGLTDLRRVLSIIPQSPVLFS-GTVRFNIDPFS------EH----NDADLWEALERAHIKDVIDRNPFGLDAEVSEG 1368 (1495)
T ss_pred hhhCCHHHHHhhcEEECCCCeeeC-ccHHHHcCCCC------CC----CHHHHHHHHHHcCCHHHHHhCcCCCCceecCC
Confidence 754 456788999999999987 49999996421 11 233478889988886643 5556653
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
..+||||||||++|||||+++|+||+||||||+||+++++.|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1369 -G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~ 1444 (1495)
T PLN03232 1369 -GENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS 1444 (1495)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC
Confidence 46799999999999999999999999999999999999999999999875 4899999999985 5667999999986
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 1445 -G~ivE~Gt~ 1453 (1495)
T PLN03232 1445 -GQVLEYDSP 1453 (1495)
T ss_pred -CEEEEECCH
Confidence 899999985
No 18
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=8.6e-65 Score=603.60 Aligned_cols=474 Identities=27% Similarity=0.352 Sum_probs=363.0
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-CCeecEEEECCccCCCCCc-------cceEEEEcCCC-
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS-LKVSGRVTYNGHDMGEFVP-------ERTAAYISQHD- 235 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 235 (1444)
.++++||||.+.+||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++||+|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 56999999999999999999999999999999999999886 4568999999997654432 26799999997
Q ss_pred -CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccc
Q 000524 236 -NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1444)
Q Consensus 236 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1444)
.+-|.+||.+-+.-..+.++... ..+...++.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~---------------------------------~~ea~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGS---------------------------------RAEARKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhcccc---------------------------------HHHHHHHHHHHHHHcCCCChhhh
Confidence 46677899888876655443211 11233456788999999987654
Q ss_pred cccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCe
Q 000524 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1444)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1444)
+..++.|||||||||.||+||+.+|++|++|||||+||..++.+|.+.|+++.++ .++.++.++|+..-+.+++|+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e-~g~a~l~ITHDl~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRE-LGMAVLFITHDLGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHH-cCcEEEEEcCCHHHHHHhcCe
Confidence 5688899999999999999999999999999999999999999999999999864 567777799999999999999
Q ss_pred EEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhh
Q 000524 395 IILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKI 474 (1444)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1444)
|++|++|++|+.|+.+++.+- | ..||... +
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p-------------------------~hpYT~~-----------------L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------P-------------------------QHPYTRG-----------------L 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------c-------------------------CCcccHH-----------------H
Confidence 999999999999999988541 1 0111000 0
Q ss_pred HHhhcCcccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccccc
Q 000524 475 SDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDG 554 (1444)
Q Consensus 475 ~~~l~~~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~~~ 554 (1444)
... .|. .... .
T Consensus 255 l~a--~p~---------------------------------------------------------------~~~~---~- 265 (539)
T COG1123 255 LAA--VPR---------------------------------------------------------------LGDE---K- 265 (539)
T ss_pred Hhh--CCC---------------------------------------------------------------cccc---c-
Confidence 000 000 0000 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCCHh
Q 000524 555 GIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAG 634 (1444)
Q Consensus 555 ~~~~g~lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~ 634 (1444)
T Consensus 266 -------------------------------------------------------------------------------- 265 (539)
T COG1123 266 -------------------------------------------------------------------------------- 265 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHHHH
Q 000524 635 RFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIVAN 714 (1444)
Q Consensus 635 ~ff~~~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~n 714 (1444)
T Consensus 266 -------------------------------------------------------------------------------- 265 (539)
T COG1123 266 -------------------------------------------------------------------------------- 265 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCcccccCCCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccccccc
Q 000524 715 EFLGYSWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQD 794 (1444)
Q Consensus 715 ef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 794 (1444)
.
T Consensus 266 --------~----------------------------------------------------------------------- 266 (539)
T COG1123 266 --------I----------------------------------------------------------------------- 266 (539)
T ss_pred --------c-----------------------------------------------------------------------
Confidence 0
Q ss_pred cccccccccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchhhhhccccCCceEE
Q 000524 795 NRIRGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVL 874 (1444)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~i 874 (1444)
.. . . .... .+ ...-++.+|++..+..+.... ....+...+
T Consensus 267 --~~--------------~------~-------~~~~--------~~-~~~ll~V~~l~k~y~~~~~~~--~~~~~~~~A 306 (539)
T COG1123 267 --IR--------------L------P-------RRGP--------LR-AEPLLSVRNLSKRYGSRKGLF--VRERGEVKA 306 (539)
T ss_pred --cc--------------c------c-------cccc--------cc-cCceeEeeeeeeeeccccccc--cccccceee
Confidence 00 0 0 0000 00 011245555554444322111 000134579
Q ss_pred eeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC--Cc---ccccceEEEEecCC--CCCCCC
Q 000524 875 LNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK--KQ---ETFARISGYCEQND--IHSPFV 947 (1444)
Q Consensus 875 L~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~--~~---~~~~~~~gyv~q~~--~~~~~l 947 (1444)
++||||.+++||++||+|.||||||||.++|+|...+ ..|.|.++|.+. +. ...++.+-+++|++ .+.|.+
T Consensus 307 v~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~ 384 (539)
T COG1123 307 VDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRM 384 (539)
T ss_pred eeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccc
Confidence 9999999999999999999999999999999998764 489999999762 11 22345556666665 567999
Q ss_pred cHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000524 948 TVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1026 (1444)
Q Consensus 948 Tv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPT 1026 (1444)
||++.+.-........ ...+++++|.++++.++|.. ..+.. +..||||||||++|||||+.+|++|++||||
T Consensus 385 tV~~~i~epL~~~~~~--~~~~~~~rv~~ll~~VgL~~~~l~ry-----P~elSGGQrQRvaIARALa~~P~lli~DEp~ 457 (539)
T COG1123 385 TVGDILAEPLRIHGGG--SGAERRARVAELLELVGLPPEFLDRY-----PHELSGGQRQRVAIARALALEPKLLILDEPV 457 (539)
T ss_pred cHHHHHHhHHhhhccc--chHHHHHHHHHHHHHcCCCHHHHhcC-----chhcCcchhHHHHHHHHHhcCCCEEEecCCc
Confidence 9999997665443322 25566778999999999986 44544 4689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1027 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1027 sgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|.||+..+..|.+.|+++.++ |.|.|+++|+.+ -+-..||||++|.+ |++|..||.
T Consensus 458 SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~-vV~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 458 SALDVSVQAQVLNLLKDLQEELGLTYLFISHDLA-VVRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred cccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHhhCceEEEEEC-CeEEEeCCH
Confidence 999999999999999999766 999999999986 47788999999996 899999985
No 19
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2.1e-64 Score=685.25 Aligned_cols=217 Identities=18% Similarity=0.291 Sum_probs=180.5
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc------------
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG------------ 912 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~------------ 912 (1444)
..++|+||+|+|+.. ++..+|+|+|++|+||+++||+||||||||||+++|.|...+.
T Consensus 1164 g~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~ 1233 (1466)
T PTZ00265 1164 GKIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHT 1233 (1466)
T ss_pred ceEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccccc
Confidence 369999999999632 1236999999999999999999999999999999999976541
Q ss_pred ----------------------------------------eEEEEEEEcCccCCc---ccccceEEEEecCCCCCCCCcH
Q 000524 913 ----------------------------------------YITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTV 949 (1444)
Q Consensus 913 ----------------------------------------~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~lTv 949 (1444)
+.+|+|.+||.++.+ ..+++.+|||+|++.+| ..|+
T Consensus 1234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTI 1312 (1466)
T PTZ00265 1234 NDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSI 1312 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccH
Confidence 148999999998754 45788899999999988 4899
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEE
Q 000524 950 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-------LIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1022 (1444)
Q Consensus 950 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illL 1022 (1444)
+||+.|+. + +.+. +.++++++..++.+ -.||.||.. ...||||||||++|||||+++|+||+|
T Consensus 1313 reNI~~g~----~-~at~----eeI~~A~k~A~l~~fI~~LP~GydT~VGe~-G~~LSGGQkQRIaIARALlr~p~ILLL 1382 (1466)
T PTZ00265 1313 YENIKFGK----E-DATR----EDVKRACKFAAIDEFIESLPNKYDTNVGPY-GKSLSGGQKQRIAIARALLREPKILLL 1382 (1466)
T ss_pred HHHHhcCC----C-CCCH----HHHHHHHHHcCCHHHHHhCccccCCccCCC-CCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99998862 1 2222 33777888777654 447888854 457999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHhcceEEEEecC---cE-EEEEcCC
Q 000524 1023 DEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPGIDIFDAFDELFLMKRG---GQ-EIYVGPL 1084 (1444)
Q Consensus 1023 DEPTsgLD~~s~~~i~~~l~~~~-~~g~tvi~t~Hqps~~i~~~fD~v~ll~~g---g~-~~y~G~~ 1084 (1444)
|||||+||+.+++.|++.|+++. .+++|+|+++|+++ ..+.+|+|++|++| |+ ++..|+-
T Consensus 1383 DEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1383 DEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred eCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999986 35899999999985 57889999999973 66 4578874
No 20
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=4e-63 Score=680.74 Aligned_cols=211 Identities=18% Similarity=0.218 Sum_probs=179.1
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++|+||+++|+.. ...+|+|||++|+|||++||+|+||||||||+++|.|... +.+|+|.|||.+
T Consensus 1283 g~I~f~nVsf~Y~~~-----------~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRED-----------LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCCC-----------CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 469999999998521 1359999999999999999999999999999999999765 347999999998
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 994 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 994 (1444)
+.+ ..+|+.++||||++.+++. |+||||.... +.+ ++.++++++.+++.+.. |+.+|..
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~------~~s----deei~~al~~a~l~~~I~~lp~GLdt~v~e~ 1418 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS------QYS----DEEVWWALELAHLKTFVSALPDKLDHECAEG 1418 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc------CCC----HHHHHHHHHHcCcHHHHhhCccCCCceecCC
Confidence 765 3567889999999999974 9999995210 122 33478899998887544 5556653
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
..+||||||||++|||||+++|+||+||||||+||++++..|+++|++.. +++|||+++|+++ ....+|+|++|++
T Consensus 1419 -G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1419 -GENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK 1494 (1522)
T ss_pred -CCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 46799999999999999999999999999999999999999999999875 4899999999975 5677999999985
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 1495 -G~IvE~G~~ 1503 (1522)
T TIGR00957 1495 -GEVAEFGAP 1503 (1522)
T ss_pred -CEEEEECCH
Confidence 899999986
No 21
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-62 Score=624.07 Aligned_cols=487 Identities=22% Similarity=0.262 Sum_probs=352.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCC----------CCC------c-cce
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMG----------EFV------P-ERT 227 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~----------~~~------~-~~~ 227 (1444)
.++|+|||+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|..+. ... . ++.
T Consensus 29 ~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 105 (623)
T PRK10261 29 IAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQA---GGLVQCDKMLLRRRSRQVIELSEQSAAQMRHVRGAD 105 (623)
T ss_pred eeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCC---CeEEEECCEEeccccccccccccCCHHHHHHHhCCC
Confidence 46999999999999999999999999999999999999987 899999986441 111 1 246
Q ss_pred EEEEcCCC--CCCCCCCHHHHHHHhhhhc-CCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHH
Q 000524 228 AAYISQHD--NHIGEMTVRETLAFSARCQ-GVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLK 304 (1444)
Q Consensus 228 ~~yv~Q~d--~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1444)
++||+|++ .+++.+||+||+.++.+.. +.. + .+...+++++++
T Consensus 106 ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~ 151 (623)
T PRK10261 106 MAMIFQEPMTSLNPVFTVGEQIAESIRLHQGAS-R---------------------------------EEAMVEAKRMLD 151 (623)
T ss_pred EEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHH
Confidence 99999997 5788899999999976532 110 0 011234677899
Q ss_pred HhCCcc---cccccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEE
Q 000524 305 VLGLEV---CADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISL 381 (1444)
Q Consensus 305 ~lgL~~---~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i 381 (1444)
.+||++ ..+. .+..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.|+++++.. +++|+.+
T Consensus 152 ~~gL~~~~~~~~~-----~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~-g~tvi~i 225 (623)
T PRK10261 152 QVRIPEAQTILSR-----YPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM-SMGVIFI 225 (623)
T ss_pred HCCCCChhhHHhC-----CCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhc-CCEEEEE
Confidence 999964 2343 445799999999999999999999999999999999999999999999987533 4456668
Q ss_pred ecCchhHHhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHH
Q 000524 382 LQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEF 461 (1444)
Q Consensus 382 ~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~ 461 (1444)
+|+..++.+++|+|++|++|++++.|+++++.+ -|.+ ++. ..+
T Consensus 226 tHdl~~~~~~adri~vl~~G~i~~~g~~~~~~~--------~~~~-------------------------~~~----~~l 268 (623)
T PRK10261 226 THDMGVVAEIADRVLVMYQGEAVETGSVEQIFH--------APQH-------------------------PYT----RAL 268 (623)
T ss_pred cCCHHHHHHhCCEEEEeeCCeecccCCHHHhhc--------CCCC-------------------------hhh----hhh
Confidence 999999999999999999999999998776521 0000 000 000
Q ss_pred HHHHHhCcchhhhHHhhcCcccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhh
Q 000524 462 AEAFQSFHVGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLF 541 (1444)
Q Consensus 462 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf 541 (1444)
.+.. +
T Consensus 269 ~~~~---------------~------------------------------------------------------------ 273 (623)
T PRK10261 269 LAAV---------------P------------------------------------------------------------ 273 (623)
T ss_pred hhcc---------------C------------------------------------------------------------
Confidence 0000 0
Q ss_pred hccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHh
Q 000524 542 LRTKMHKHSLTDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVF 621 (1444)
Q Consensus 542 ~~~~~~~~~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~ 621 (1444)
.... ..
T Consensus 274 ---~~~~--~~--------------------------------------------------------------------- 279 (623)
T PRK10261 274 ---QLGA--MK--------------------------------------------------------------------- 279 (623)
T ss_pred ---cccc--cc---------------------------------------------------------------------
Confidence 0000 00
Q ss_pred hhhhccccCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHH
Q 000524 622 LTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWC 701 (1444)
Q Consensus 622 i~Y~~~g~~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~i 701 (1444)
+
T Consensus 280 ------~------------------------------------------------------------------------- 280 (623)
T PRK10261 280 ------G------------------------------------------------------------------------- 280 (623)
T ss_pred ------c-------------------------------------------------------------------------
Confidence 0
Q ss_pred cHHHHHHHHHHHHhhcCCcccccCCCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCc
Q 000524 702 SPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPR 781 (1444)
Q Consensus 702 sp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~ 781 (1444)
... +.. . ....
T Consensus 281 -----------------~~~----~~~-------------~-----------------------------------~~~~ 291 (623)
T PRK10261 281 -----------------LDY----PRR-------------F-----------------------------------PLIS 291 (623)
T ss_pred -----------------ccC----Ccc-------------c-----------------------------------cccc
Confidence 000 000 0 0000
Q ss_pred ccccccccccccccccccccccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchh
Q 000524 782 AVITEESESNKQDNRIRGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQE 861 (1444)
Q Consensus 782 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 861 (1444)
. .. . .. . ... . ... .. +....-++++|+++.++....
T Consensus 292 ~----~~------~--~~----~------~~~------~-------~~~--~~------~~~~~~L~~~~l~~~y~~~~~ 328 (623)
T PRK10261 292 L----EH------P--AK----Q------EPP------I-------EQD--TV------VDGEPILQVRNLVTRFPLRSG 328 (623)
T ss_pred c----cc------c--cc----c------Ccc------c-------ccc--cc------cCCCceEEEeeeEEEEcCCCc
Confidence 0 00 0 00 0 000 0 000 00 000113788888877642100
Q ss_pred hhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc------cccceEE
Q 000524 862 MKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE------TFARISG 935 (1444)
Q Consensus 862 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~g 935 (1444)
. . +.....+.+|+||||+|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++... .+++.++
T Consensus 329 ~-~-~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~i~ 404 (623)
T PRK10261 329 L-L-NRVTREVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVES--QGGEIIFNGQRIDTLSPGKLQALRRDIQ 404 (623)
T ss_pred c-c-cccCCceEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCcEEEECCEECCcCCHHHHHHhcCCeE
Confidence 0 0 0000124699999999999999999999999999999999998653 479999999875321 2356799
Q ss_pred EEecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHH
Q 000524 936 YCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVE 1012 (1444)
Q Consensus 936 yv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrkRl~ia~~ 1012 (1444)
|++|++ .+++.+||.|++.+....+. ....+..++.+.++++.+||. +..++. +..|||||||||+||++
T Consensus 405 ~v~Q~~~~~l~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSgGqrQRv~iAra 477 (623)
T PRK10261 405 FIFQDPYASLDPRQTVGDSIMEPLRVHG--LLPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSGGQRQRICIARA 477 (623)
T ss_pred EEecCchhhcCCCCCHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHH
Confidence 999997 47889999999987644321 112334456789999999996 456665 45799999999999999
Q ss_pred HhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1013 LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1013 L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|+.+|++|||||||+|||..++..+++.|++++++ |.|||+++|+++ .+.+.||++++|++ |++++.|+.
T Consensus 478 L~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~ 548 (623)
T PRK10261 478 LALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPR 548 (623)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999765 899999999986 57789999999986 799999986
No 22
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-63 Score=618.12 Aligned_cols=460 Identities=20% Similarity=0.288 Sum_probs=348.2
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ ..+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 96 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHG-TYEGEIIFEGEELQASNIRDTERAGIAIIHQELALVKE 96 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHHCCeEEEEeccccCCC
Confidence 35999999999999999999999999999999999999861 128999999998865432 3569999999989999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||+||+.++......+. .+ . .+...+++++++.+||++..+..+
T Consensus 97 ~tv~e~l~~~~~~~~~~~-~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (506)
T PRK13549 97 LSVLENIFLGNEITPGGI-MD------Y------------------------DAMYLRAQKLLAQLKLDINPATPV---- 141 (506)
T ss_pred CcHHHHhhhcccccccCC-cC------H------------------------HHHHHHHHHHHHHcCCCCCcccch----
Confidence 999999998653210000 00 0 001224577899999987777655
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
+.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.+++|+|++|++
T Consensus 142 -~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvi~~tH~~~~~~~~~d~v~~l~~ 218 (506)
T PRK13549 142 -GNLGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-H-GIACIYISHKLNEVKAISDTICVIRD 218 (506)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCcHHHHHHhcCEEEEEEC
Confidence 46999999999999999999999999999999999999999999999864 3 44566678888899999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhhHHhhcC
Q 000524 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1444)
Q Consensus 401 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (1444)
|++++.|+.+++.. .+..+.
T Consensus 219 G~i~~~~~~~~~~~--------------------------------------------~~~~~~---------------- 238 (506)
T PRK13549 219 GRHIGTRPAAGMTE--------------------------------------------DDIITM---------------- 238 (506)
T ss_pred CEEeeecccccCCH--------------------------------------------HHHHHH----------------
Confidence 99998886432200 000000
Q ss_pred cccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccccchhHHHH
Q 000524 481 PFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGA 560 (1444)
Q Consensus 481 ~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~ 560 (1444)
+. . .. .
T Consensus 239 ------------------------------------------------------------~~--~--~~-~--------- 244 (506)
T PRK13549 239 ------------------------------------------------------------MV--G--RE-L--------- 244 (506)
T ss_pred ------------------------------------------------------------hh--C--cC-c---------
Confidence 00 0 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCCHhHHHHHH
Q 000524 561 LFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQY 640 (1444)
Q Consensus 561 lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 640 (1444)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHHHHhhcCCc
Q 000524 641 LLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIVANEFLGYS 720 (1444)
Q Consensus 641 l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 720 (1444)
+
T Consensus 245 ---------------------------------------------------~---------------------------- 245 (506)
T PRK13549 245 ---------------------------------------------------T---------------------------- 245 (506)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred ccccCCCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccccccccccccc
Q 000524 721 WKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGT 800 (1444)
Q Consensus 721 ~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1444)
. .. + . ..
T Consensus 246 --~-------------------------------------------------~~-~--~------------------~~- 252 (506)
T PRK13549 246 --A-------------------------------------------------LY-P--R------------------EP- 252 (506)
T ss_pred --c-------------------------------------------------cc-c--c------------------cc-
Confidence 0 00 0 0 00
Q ss_pred cccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchhhhhccccCCceEEeeccEE
Q 000524 801 VQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSG 880 (1444)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~ 880 (1444)
. .. ...-+.++|+++.++.. +++.+|+|||+
T Consensus 253 -------------------~------------~~--------~~~~l~~~~l~~~~~~~----------~~~~vl~~vsl 283 (506)
T PRK13549 253 -------------------H------------TI--------GEVILEVRNLTAWDPVN----------PHIKRVDDVSF 283 (506)
T ss_pred -------------------c------------CC--------CCceEEEecCccccccc----------cccccccceee
Confidence 0 00 00125566666544210 12358999999
Q ss_pred EEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEEecCC---CCCCCCcHHHHH
Q 000524 881 AFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPFVTVYESL 953 (1444)
Q Consensus 881 ~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~lTv~e~l 953 (1444)
+|++||++||+|+||||||||+++|+|...+ +.+|+|.++|.++... ..++.++|++|+. .+++.+||.|++
T Consensus 284 ~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l 362 (506)
T PRK13549 284 SLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNI 362 (506)
T ss_pred EEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHh
Confidence 9999999999999999999999999997541 1379999999875421 1245689999985 467889999999
Q ss_pred HHHHHhcCC--CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000524 954 LYSAWLRLP--PEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1030 (1444)
Q Consensus 954 ~f~a~lr~~--~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD 1030 (1444)
.+....... ...+.+...+.++++++.+++. +..+..+ ..||||||||++||++|+.+|++|+|||||+|||
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD 437 (506)
T PRK13549 363 TLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPKILILDEPTRGID 437 (506)
T ss_pred hhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcC
Confidence 875321111 0112233445688999999996 4666654 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCCc
Q 000524 1031 ARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGR 1086 (1444)
Q Consensus 1031 ~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~~ 1086 (1444)
+.+...+++.|++++++|+|||+++|++. ++.+.||++++|++ |+++..|+..+
T Consensus 438 ~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 438 VGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred HhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 99999999999999888999999999986 68889999999986 79999887754
No 23
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.1e-62 Score=614.69 Aligned_cols=450 Identities=21% Similarity=0.318 Sum_probs=345.2
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 45999999999999999999999999999999999999987 9999999988754322 3569999999989999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||+||+.++.......... + ..+.+.+++++++.+||++..|..++
T Consensus 94 ~tv~e~l~~~~~~~~~~~~~-------------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~--- 140 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGRI-------------------D-----------WKKMYAEADKLLARLNLRFSSDKLVG--- 140 (501)
T ss_pred CcHHHHhhhccccccccCcc-------------------C-----------HHHHHHHHHHHHHHcCCCCCccCchh---
Confidence 99999999864321000000 0 00012245678999999887776554
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+ . +++|+.++|+.+++.+++|+|++|++
T Consensus 141 --~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-~~tvii~sHd~~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 141 --ELSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-Q-GRGIVYISHRLKEIFEICDDVTVFRD 216 (501)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 6999999999999999999999999999999999999999999999864 3 44566688888999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhhHHhhcC
Q 000524 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1444)
Q Consensus 401 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (1444)
|+++..|+.+++.. ++..+.+
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~~~~~--------------- 237 (501)
T PRK10762 217 GQFIAEREVADLTE--------------------------------------------DSLIEMM--------------- 237 (501)
T ss_pred CEEEEecCcCcCCH--------------------------------------------HHHHHHh---------------
Confidence 99998875432100 0000000
Q ss_pred cccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccccchhHHHH
Q 000524 481 PFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGA 560 (1444)
Q Consensus 481 ~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~ 560 (1444)
+ . .. .
T Consensus 238 -------------------------------------------------------------~--~--~~-~--------- 242 (501)
T PRK10762 238 -------------------------------------------------------------V--G--RK-L--------- 242 (501)
T ss_pred -------------------------------------------------------------c--C--CC-c---------
Confidence 0 0 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCCHhHHHHHH
Q 000524 561 LFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQY 640 (1444)
Q Consensus 561 lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 640 (1444)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHHHHhhcCCc
Q 000524 641 LLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIVANEFLGYS 720 (1444)
Q Consensus 641 l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 720 (1444)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK10762 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccccccccccccc
Q 000524 721 WKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGT 800 (1444)
Q Consensus 721 ~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1444)
... ..
T Consensus 243 ---------------------------------------------------------~~~-----------------~~- 247 (501)
T PRK10762 243 ---------------------------------------------------------EDQ-----------------YP- 247 (501)
T ss_pred ---------------------------------------------------------ccc-----------------cc-
Confidence 000 00
Q ss_pred cccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchhhhhccccCCceEEeeccEE
Q 000524 801 VQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSG 880 (1444)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~ 880 (1444)
. . . . +..+..+.++|++. .+|+|+|+
T Consensus 248 ------------~------~-------~-~----------~~~~~~l~~~~l~~------------------~~l~~vsl 273 (501)
T PRK10762 248 ------------R------L-------D-K----------APGEVRLKVDNLSG------------------PGVNDVSF 273 (501)
T ss_pred ------------c------c-------c-c----------CCCCcEEEEeCccc------------------CCcccceE
Confidence 0 0 0 0 00001245565541 26999999
Q ss_pred EEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEEecCC---CCCCCCcHHHHH
Q 000524 881 AFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPFVTVYESL 953 (1444)
Q Consensus 881 ~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~lTv~e~l 953 (1444)
++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++... ..++.+||++|++ .+++.+||.|++
T Consensus 274 ~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l 351 (501)
T PRK10762 274 TLRKGEILGVSGLMGAGRTELMKVLYGALPR--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENM 351 (501)
T ss_pred EEcCCcEEEEecCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHh
Confidence 9999999999999999999999999998653 479999999875421 2345689999995 467889999999
Q ss_pred HHHHHhcCC---CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000524 954 LYSAWLRLP---PEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1444)
Q Consensus 954 ~f~a~lr~~---~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgL 1029 (1444)
.+....... .....+..++.++++++.++|. +..++.+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~lllLDEPt~~L 426 (501)
T PRK10762 352 SLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKVLILDEPTRGV 426 (501)
T ss_pred hhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCC
Confidence 875321110 0112233345688999999995 5666654 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCCc
Q 000524 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGR 1086 (1444)
Q Consensus 1030 D~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~~ 1086 (1444)
|+.++..+.+.|++++++|+|||+++|++. ++.+.||++++|++ |++++.|+..+
T Consensus 427 D~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 427 DVGAKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred CHhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 999999999999999878999999999986 68889999999985 79999988753
No 24
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-62 Score=616.63 Aligned_cols=458 Identities=21% Similarity=0.288 Sum_probs=346.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 35999999999999999999999999999999999999987 9999999998865432 2469999999989999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||+||+.++..... ..+.. +..+ ..+...+++.+++.+||++..++.++
T Consensus 95 ~tv~e~l~~~~~~~~--~~~~~--------------~~~~-----------~~~~~~~~~~~l~~~gl~~~~~~~~~--- 144 (510)
T PRK09700 95 LTVLENLYIGRHLTK--KVCGV--------------NIID-----------WREMRVRAAMMLLRVGLKVDLDEKVA--- 144 (510)
T ss_pred CcHHHHhhhcccccc--ccccc--------------cccC-----------HHHHHHHHHHHHHHcCCCCCcccchh---
Confidence 999999987532100 00000 0000 00112346778999999877776654
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .+ ++|+.++|+..++.+++|+|++|++
T Consensus 145 --~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g-~tiiivsHd~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 145 --NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-EG-TAIVYISHKLAEIRRICDRYTVMKD 220 (510)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CC-CEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999865 34 4556688889999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhhHHhhcC
Q 000524 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1444)
Q Consensus 401 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (1444)
|++++.|+.+++.. ++..+..
T Consensus 221 G~i~~~g~~~~~~~--------------------------------------------~~~~~~~--------------- 241 (510)
T PRK09700 221 GSSVCSGMVSDVSN--------------------------------------------DDIVRLM--------------- 241 (510)
T ss_pred CEEeeecchhhCCH--------------------------------------------HHHHHHh---------------
Confidence 99999887653210 0000000
Q ss_pred cccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccccchhHHHH
Q 000524 481 PFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGA 560 (1444)
Q Consensus 481 ~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~ 560 (1444)
. + .. ..
T Consensus 242 -------------------------------------------------------------~--~--~~-~~-------- 247 (510)
T PRK09700 242 -------------------------------------------------------------V--G--RE-LQ-------- 247 (510)
T ss_pred -------------------------------------------------------------c--C--CC-cc--------
Confidence 0 0 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCCHhHHHHHH
Q 000524 561 LFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQY 640 (1444)
Q Consensus 561 lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 640 (1444)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHHHHhhcCCc
Q 000524 641 LLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIVANEFLGYS 720 (1444)
Q Consensus 641 l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 720 (1444)
+ .+
T Consensus 248 ----------------------------------------------~---------------------------~~---- 250 (510)
T PRK09700 248 ----------------------------------------------N---------------------------RF---- 250 (510)
T ss_pred ----------------------------------------------c---------------------------cc----
Confidence 0 00
Q ss_pred ccccCCCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccccccccccccc
Q 000524 721 WKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGT 800 (1444)
Q Consensus 721 ~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1444)
.. . ..
T Consensus 251 -~~-----------------------------------------------------~--------------------~~- 255 (510)
T PRK09700 251 -NA-----------------------------------------------------M--------------------KE- 255 (510)
T ss_pred -cc-----------------------------------------------------c--------------------cc-
Confidence 00 0 00
Q ss_pred cccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchhhhhccccCCceEEeeccEE
Q 000524 801 VQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSG 880 (1444)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~ 880 (1444)
. . .. .. .+.-+.++|++..+ + .+|+|+|+
T Consensus 256 ------------~------~---------~~-~~--------~~~~l~~~~l~~~~-------------~--~~l~~isl 284 (510)
T PRK09700 256 ------------N------V---------SN-LA--------HETVFEVRNVTSRD-------------R--KKVRDISF 284 (510)
T ss_pred ------------c------c---------cc-CC--------CCcEEEEeCccccC-------------C--CcccceeE
Confidence 0 0 00 00 00125667766431 1 27999999
Q ss_pred EEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEEecC---CCCCCCCcHHHHH
Q 000524 881 AFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQN---DIHSPFVTVYESL 953 (1444)
Q Consensus 881 ~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~---~~~~~~lTv~e~l 953 (1444)
++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++... ..++.+||++|+ ..+++.+||+|++
T Consensus 285 ~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l 362 (510)
T PRK09700 285 SVCRGEILGFAGLVGSGRTELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNM 362 (510)
T ss_pred EEcCCcEEEEECCCCCCHHHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHh
Confidence 9999999999999999999999999997653 479999999875321 234568999998 4577889999999
Q ss_pred HHHHHhc---CCC--C-CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000524 954 LYSAWLR---LPP--E-VDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1026 (1444)
Q Consensus 954 ~f~a~lr---~~~--~-~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPT 1026 (1444)
.+....+ ... . ......++.++++++.++|. +..++.+ ..|||||||||.||++|+.+|+||+|||||
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~p~lLlLDEPt 437 (510)
T PRK09700 363 AISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCCPEVIIFDEPT 437 (510)
T ss_pred ccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcCCCEEEECCCC
Confidence 8653211 000 0 11222334578999999996 6667664 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1027 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1027 sgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
+|||+.+...+++.|++++++|.|||+++|++. ++.+.||++++|++ |+++..++.
T Consensus 438 ~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 438 RGIDVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred CCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 999999999999999999878999999999986 68889999999986 788888865
No 25
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=5.6e-62 Score=612.29 Aligned_cols=464 Identities=22% Similarity=0.285 Sum_probs=345.4
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCeecEEEECCccCCCCCc-------cceEEEEcCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFVP-------ERTAAYISQHD 235 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1444)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++|. ...+|+|.++|+++..... ++.++||+|++
T Consensus 22 ~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~ 101 (529)
T PRK15134 22 RTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEP 101 (529)
T ss_pred eeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCc
Confidence 46999999999999999999999999999999999999861 1138999999998765321 24699999986
Q ss_pred C--CCCCCCHHHHHHHhhhhc-CCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcc--
Q 000524 236 N--HIGEMTVRETLAFSARCQ-GVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV-- 310 (1444)
Q Consensus 236 ~--~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-- 310 (1444)
. +++.+||+|++.+..... +.. + .+...+++++++.+||++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~ 147 (529)
T PRK15134 102 MVSLNPLHTLEKQLYEVLSLHRGMR----------R------------------------EAARGEILNCLDRVGIRQAA 147 (529)
T ss_pred hhhcCchhhHHHHHHHHHHHhcCCC----------H------------------------HHHHHHHHHHHHHCCCCChH
Confidence 4 567789999988653211 100 0 011234677899999975
Q ss_pred -cccccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHH
Q 000524 311 -CADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETY 389 (1444)
Q Consensus 311 -~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~ 389 (1444)
..+.. +..|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+ .+||.++|+..++.
T Consensus 148 ~~~~~~-----~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g-~tvi~vtHd~~~~~ 221 (529)
T PRK15134 148 KRLTDY-----PHQLSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELN-MGLLFITHNLSIVR 221 (529)
T ss_pred HHHhhC-----CcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcC-CeEEEEcCcHHHHH
Confidence 23544 457999999999999999999999999999999999999999999999865334 45556788888999
Q ss_pred hhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCc
Q 000524 390 DLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFH 469 (1444)
Q Consensus 390 ~~fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (1444)
+++|+|++|++|++++.|+.+++.+. |. .+ ..
T Consensus 222 ~~~dri~~l~~G~i~~~g~~~~~~~~--------~~-------------------------~~--------~~------- 253 (529)
T PRK15134 222 KLADRVAVMQNGRCVEQNRAATLFSA--------PT-------------------------HP--------YT------- 253 (529)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHhhC--------CC-------------------------CH--------HH-------
Confidence 99999999999999999977654210 00 00 00
Q ss_pred chhhhHHhhcCcccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCC
Q 000524 470 VGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKH 549 (1444)
Q Consensus 470 ~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~ 549 (1444)
+.+ +...
T Consensus 254 -----------------------------------------~~~----------------------------~~~~---- 260 (529)
T PRK15134 254 -----------------------------------------QKL----------------------------LNSE---- 260 (529)
T ss_pred -----------------------------------------HHH----------------------------HHhC----
Confidence 000 0000
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhcccc
Q 000524 550 SLTDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGC 629 (1444)
Q Consensus 550 ~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~ 629 (1444)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHH
Q 000524 630 DPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQN 709 (1444)
Q Consensus 630 ~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~ 709 (1444)
+
T Consensus 261 --------------------------------------------------------------~----------------- 261 (529)
T PRK15134 261 --------------------------------------------------------------P----------------- 261 (529)
T ss_pred --------------------------------------------------------------c-----------------
Confidence 0
Q ss_pred HHHHHhhcCCcccccCCCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccc
Q 000524 710 AIVANEFLGYSWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESE 789 (1444)
Q Consensus 710 al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~ 789 (1444)
. .
T Consensus 262 -----------------~--------------------------------------------------~----------- 263 (529)
T PRK15134 262 -----------------S--------------------------------------------------G----------- 263 (529)
T ss_pred -----------------c--------------------------------------------------c-----------
Confidence 0 0
Q ss_pred ccccccccccccccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchhhhhccccC
Q 000524 790 SNKQDNRIRGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLE 869 (1444)
Q Consensus 790 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 869 (1444)
.. .. . . .. .+.-++++|+++.++...+. . +...
T Consensus 264 --------~~-------------~~-----~-------~----~~--------~~~~l~~~~l~~~~~~~~~~-~-~~~~ 296 (529)
T PRK15134 264 --------DP-------------VP-----L-------P----EP--------ASPLLDVEQLQVAFPIRKGI-L-KRTV 296 (529)
T ss_pred --------cc-------------cc-----c-------C----CC--------CCCcccccCcEEEeecCccc-c-cccc
Confidence 00 00 0 0 00 00014556666555311000 0 0000
Q ss_pred CceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc------cccceEEEEecCC--
Q 000524 870 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE------TFARISGYCEQND-- 941 (1444)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~q~~-- 941 (1444)
+.+.+|+|||+++++||++||+||||||||||+++|+|... .+|+|.++|.++... .+++.+||++|+.
T Consensus 297 ~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 373 (529)
T PRK15134 297 DHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNS 373 (529)
T ss_pred ccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchh
Confidence 12469999999999999999999999999999999999763 479999999875321 1245689999996
Q ss_pred CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEE
Q 000524 942 IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSII 1020 (1444)
Q Consensus 942 ~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~il 1020 (1444)
.+++.+||.|++.+....+.. .......++.++++++.++|. +..+.. +..|||||||||+||++|+.+|++|
T Consensus 374 ~l~~~~tv~e~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~ll 447 (529)
T PRK15134 374 SLNPRLNVLQIIEEGLRVHQP-TLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIARALILKPSLI 447 (529)
T ss_pred hcCCcccHHHHHHHHHHhccc-cCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHHHHhCCCCEE
Confidence 467889999999886543211 122334455688999999997 456655 3579999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1021 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1021 lLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.||++++|++ |+++..|+.
T Consensus 448 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 448 ILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred EeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 999999999999999999999999865 899999999986 57788999999986 799998875
No 26
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.8e-61 Score=658.91 Aligned_cols=211 Identities=24% Similarity=0.271 Sum_probs=179.5
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..+.|+||+++|+. +...+|+||||+|+|||++||+|+||||||||+++|.|... +.+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 46999999999852 12359999999999999999999999999999999999866 347999999998
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 994 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1444)
+.+ ..+++.++||||++.++. -|++|||... .+. .++.++++++.+++.+. .|+.+|..
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~-gTIreNIdp~------~~~----sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~ 1442 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFD-GTVRQNVDPF------LEA----SSAEVWAALELVGLRERVASESEGIDSRVLEG 1442 (1560)
T ss_pred cccCCHHHHHhcceEECCCCcccc-ccHHHHhCcc------cCC----CHHHHHHHHHHCCChHHHhhCcccccccccCC
Confidence 764 457889999999999986 4999999421 112 23458899999998765 36667653
Q ss_pred CCCcCCHHHHHHHHHHHHHhhC-CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe
Q 000524 995 GVSGLSTEQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1073 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~-p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~ 1073 (1444)
..+||||||||++|||||+++ |+||+||||||+||+++.+.|+++|++.. +++|||+++|+++ ....||+|++|+
T Consensus 1443 -G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVLd 1518 (1560)
T PTZ00243 1443 -GSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRLH--TVAQYDKIIVMD 1518 (1560)
T ss_pred -cCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccHH--HHHhCCEEEEEE
Confidence 468999999999999999995 89999999999999999999999999874 4799999999974 678899999998
Q ss_pred cCcEEEEEcCC
Q 000524 1074 RGGQEIYVGPL 1084 (1444)
Q Consensus 1074 ~gg~~~y~G~~ 1084 (1444)
+ |+++..|+.
T Consensus 1519 ~-G~VvE~Gt~ 1528 (1560)
T PTZ00243 1519 H-GAVAEMGSP 1528 (1560)
T ss_pred C-CEEEEECCH
Confidence 5 899999985
No 27
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.2e-61 Score=608.40 Aligned_cols=445 Identities=23% Similarity=0.321 Sum_probs=341.3
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCeecEEEECC-----------------------ccC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKL--DSSLKVSGRVTYNG-----------------------HDM 219 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l--~~~~~~~G~I~~~G-----------------------~~~ 219 (1444)
+.+|+|+|+.+.+|++++|+|||||||||||++|+|.+ +|+ +|+|.++| .++
T Consensus 13 ~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~---~G~i~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 89 (520)
T TIGR03269 13 KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPT---SGRIIYHVALCEKCGYVERPSKVGEPCPVCGGTL 89 (520)
T ss_pred eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCC---ceEEEEeccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999997 576 89999972 221
Q ss_pred C-------CC------CccceEEEEcCC-CCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHH
Q 000524 220 G-------EF------VPERTAAYISQH-DNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYM 285 (1444)
Q Consensus 220 ~-------~~------~~~~~~~yv~Q~-d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~ 285 (1444)
. .. ..++.++||+|+ +.+++.+||+||+.|+....+...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~--------------------------- 142 (520)
T TIGR03269 90 EPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEG--------------------------- 142 (520)
T ss_pred cccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCH---------------------------
Confidence 1 00 013568999997 678888999999998654322100
Q ss_pred HHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHH
Q 000524 286 KAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNC 365 (1444)
Q Consensus 286 ~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~ 365 (1444)
.+...+++++++.+||++..+..+ ..|||||||||+||+||+.+|++|||||||+|||+.++.++.+.
T Consensus 143 -------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~ 210 (520)
T TIGR03269 143 -------KEAVGRAVDLIEMVQLSHRITHIA-----RDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNA 210 (520)
T ss_pred -------HHHHHHHHHHHHHcCChhhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHH
Confidence 011234677899999987666544 46999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhh
Q 000524 366 LKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQY 445 (1444)
Q Consensus 366 L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~ 445 (1444)
|+++++.. +++|+.++|+...+.+++|+|++|++|++++.|+++++.+.+..
T Consensus 211 l~~l~~~~-g~tviivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~--------------------------- 262 (520)
T TIGR03269 211 LEEAVKAS-GISMVLTSHWPEVIEDLSDKAIWLENGEIKEEGTPDEVVAVFME--------------------------- 262 (520)
T ss_pred HHHHHHhc-CcEEEEEeCCHHHHHHhcCEEEEEeCCEEeeecCHHHHHHHHHh---------------------------
Confidence 99986543 44566688888889999999999999999988865533110000
Q ss_pred hcccCCCCccCCHHHHHHHHHhCcchhhhHHhhcCcccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHH
Q 000524 446 WTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIF 525 (1444)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~ 525 (1444)
T Consensus 263 -------------------------------------------------------------------------------- 262 (520)
T TIGR03269 263 -------------------------------------------------------------------------------- 262 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHhhhccccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHH
Q 000524 526 KLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSW 605 (1444)
Q Consensus 526 ~~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~ 605 (1444)
...
T Consensus 263 -------------------~~~---------------------------------------------------------- 265 (520)
T TIGR03269 263 -------------------GVS---------------------------------------------------------- 265 (520)
T ss_pred -------------------hch----------------------------------------------------------
Confidence 000
Q ss_pred HHHhhHHHHHHHHHHhhhhhccccCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccc
Q 000524 606 ILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFV 685 (1444)
Q Consensus 606 l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~ 685 (1444)
T Consensus 266 -------------------------------------------------------------------------------- 265 (520)
T TIGR03269 266 -------------------------------------------------------------------------------- 265 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCccchhhhHHHHHHHcHHHHHHHHHHHHhhcCCcccccCCCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHH
Q 000524 686 LSREDIKKWWKWAYWCSPMSYAQNAIVANEFLGYSWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNL 765 (1444)
Q Consensus 686 i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~ 765 (1444)
.+
T Consensus 266 ----~~-------------------------------------------------------------------------- 267 (520)
T TIGR03269 266 ----EV-------------------------------------------------------------------------- 267 (520)
T ss_pred ----hh--------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHhcccCCCcccccccccccccccccccccccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCc
Q 000524 766 GFTMAITFLNQLEKPRAVITEESESNKQDNRIRGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPH 845 (1444)
Q Consensus 766 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (1444)
.+. .. . +. ...
T Consensus 268 ------------~~~-----------------~~-------------~-------------------~~--------~~~ 278 (520)
T TIGR03269 268 ------------EKE-----------------CE-------------V-------------------EV--------GEP 278 (520)
T ss_pred ------------ccc-----------------cc-------------c-------------------CC--------CCc
Confidence 000 00 0 00 001
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEc-Ccc
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITIS-GYP 924 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~-g~~ 924 (1444)
-++++|+++.++... .+.+.+|+|+||.|++||++||+||||||||||+++|+|...+ .+|+|.++ |.+
T Consensus 279 ~l~~~~l~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~~g~~ 348 (520)
T TIGR03269 279 IIKVRNVSKRYISVD--------RGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEP--TSGEVNVRVGDE 348 (520)
T ss_pred eEEEeccEEEeccCC--------CCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEEecCCc
Confidence 256777777663100 0124699999999999999999999999999999999998653 47999996 532
Q ss_pred ---CCc------ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-----ccccc
Q 000524 925 ---KKQ------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-----LIQSL 990 (1444)
Q Consensus 925 ---~~~------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-----~~~~~ 990 (1444)
... ...++.+||++|++.+++.+||.|++.+...+. ...+..++.+.++++.++|.+ ..++.
T Consensus 349 ~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 424 (520)
T TIGR03269 349 WVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLE----LPDELARMKAVITLKMVGFDEEKAEEILDKY 424 (520)
T ss_pred cccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCCCccchhhhhCC
Confidence 111 122456899999988889999999998754321 122333456889999999975 34554
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceE
Q 000524 991 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDEL 1069 (1444)
Q Consensus 991 vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v 1069 (1444)
+..|||||||||+||++|+.+|+||+|||||+|||+.+...+++.|++++++ |.|||+++|++. .+.+.||++
T Consensus 425 -----~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i 498 (520)
T TIGR03269 425 -----PDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRA 498 (520)
T ss_pred -----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEE
Confidence 4579999999999999999999999999999999999999999999999765 899999999986 578889999
Q ss_pred EEEecCcEEEEEcCC
Q 000524 1070 FLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1070 ~ll~~gg~~~y~G~~ 1084 (1444)
++|++ |+++..|+.
T Consensus 499 ~~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 499 ALMRD-GKIVKIGDP 512 (520)
T ss_pred EEEEC-CEEEEECCH
Confidence 99985 789888875
No 28
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=7.2e-62 Score=607.59 Aligned_cols=453 Identities=20% Similarity=0.271 Sum_probs=342.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 35999999999999999999999999999999999999987 9999999998765432 2469999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||+||+.|+.... + +.+..++++++.+||++..+..++
T Consensus 101 ~tv~e~l~~~~~~~------~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (510)
T PRK15439 101 LSVKENILFGLPKR------Q--------------------------------ASMQKMKQLLAALGCQLDLDSSAG--- 139 (510)
T ss_pred CcHHHHhhcccccc------h--------------------------------HHHHHHHHHHHHcCCCccccCChh---
Confidence 99999998853200 0 011235678899999877776554
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.++||+|++|++
T Consensus 140 --~LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiivtHd~~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 140 --SLEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-Q-GVGIVFISHKLPEIRQLADRISVMRD 215 (510)
T ss_pred --hCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999864 3 44566688888999999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhhHHhhcC
Q 000524 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1444)
Q Consensus 401 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (1444)
|++++.|+.+++... +..+.+.. .
T Consensus 216 G~i~~~g~~~~~~~~--------------------------------------------~~~~~~~~------------~ 239 (510)
T PRK15439 216 GTIALSGKTADLSTD--------------------------------------------DIIQAITP------------A 239 (510)
T ss_pred CEEEEecChHHcCHH--------------------------------------------HHHHHHhC------------c
Confidence 999999987653210 00000000 0
Q ss_pred cccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccccchhHHHH
Q 000524 481 PFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGA 560 (1444)
Q Consensus 481 ~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~ 560 (1444)
..... ...
T Consensus 240 ----------------------------------------------------------------~~~~~-~~~------- 247 (510)
T PRK15439 240 ----------------------------------------------------------------AREKS-LSA------- 247 (510)
T ss_pred ----------------------------------------------------------------ccccc-ccc-------
Confidence 00000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCCHhHHHHHH
Q 000524 561 LFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQY 640 (1444)
Q Consensus 561 lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 640 (1444)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHHHHhhcCCc
Q 000524 641 LLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIVANEFLGYS 720 (1444)
Q Consensus 641 l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 720 (1444)
...
T Consensus 248 --------------------------------------------------~~~--------------------------- 250 (510)
T PRK15439 248 --------------------------------------------------SQK--------------------------- 250 (510)
T ss_pred --------------------------------------------------ccc---------------------------
Confidence 000
Q ss_pred ccccCCCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccccccccccccc
Q 000524 721 WKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGT 800 (1444)
Q Consensus 721 ~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1444)
. ...+ + .
T Consensus 251 ~-----------------~~~~---------------------------------~----------------------~- 257 (510)
T PRK15439 251 L-----------------WLEL---------------------------------P----------------------G- 257 (510)
T ss_pred c-----------------cccc---------------------------------c----------------------c-
Confidence 0 0000 0 0
Q ss_pred cccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchhhhhccccCCceEEeeccEE
Q 000524 801 VQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSG 880 (1444)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~ 880 (1444)
. .... .. .+.-+..+|++. .+|+|||+
T Consensus 258 ------------~--------------~~~~-~~--------~~~~l~~~~l~~------------------~~l~~isl 284 (510)
T PRK15439 258 ------------N--------------RRQQ-AA--------GAPVLTVEDLTG------------------EGFRNISL 284 (510)
T ss_pred ------------c--------------cccc-CC--------CCceEEEeCCCC------------------CCccceeE
Confidence 0 0000 00 001255666541 15899999
Q ss_pred EEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEEecCC---CCCCCCcHHHHH
Q 000524 881 AFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQND---IHSPFVTVYESL 953 (1444)
Q Consensus 881 ~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~---~~~~~lTv~e~l 953 (1444)
++++||++||+||||||||||+++|+|...+ .+|+|.++|.++... ..++.++|++|+. .+++.+|+.|++
T Consensus 285 ~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l 362 (510)
T PRK15439 285 EVRAGEILGLAGVVGAGRTELAETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNV 362 (510)
T ss_pred EEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHH
Confidence 9999999999999999999999999997653 479999999875431 1234689999984 467889999998
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000524 954 LYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1032 (1444)
Q Consensus 954 ~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~ 1032 (1444)
......+..........++.++++++.++|. +..++.+ +.||||||||++||++|+.+|+||||||||+|||+.
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~ 437 (510)
T PRK15439 363 CALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVS 437 (510)
T ss_pred HhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChh
Confidence 6421111110011122334688999999997 6667664 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCC
Q 000524 1033 AAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1085 (1444)
Q Consensus 1033 s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~ 1085 (1444)
+...+.+.|++++++|.|||+++|++. ++.+.||++++|++ |++++.|..+
T Consensus 438 ~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~ 488 (510)
T PRK15439 438 ARNDIYQLIRSIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGA 488 (510)
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 999999999999888999999999996 68889999999985 7999888654
No 29
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.8e-60 Score=652.33 Aligned_cols=210 Identities=20% Similarity=0.256 Sum_probs=179.0
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++|+||+++|+. +.+.+|+|||++|+|||++||+|+||||||||+++|+|... .+|+|.|||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 46999999999852 12469999999999999999999999999999999999764 47999999998
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 994 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1444)
+.+ ..+++.++||||++.+++ -|+||||.... +..++.++++++.++|.+. .|+.+|.
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~-GTIR~NLdp~~----------~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e- 1349 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFS-GTFRKNLDPYE----------QWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD- 1349 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCc-cCHHHHhCccc----------CCCHHHHHHHHHHCCCHHHHHhCcccccccccc-
Confidence 764 346788999999999997 59999994311 1124458899999998654 3556664
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
+..+||||||||++|||||+++|+||+||||||+||..++..|++.|++.. +++|||+++|+++ ....||+|++|++
T Consensus 1350 ~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~ 1426 (1490)
T TIGR01271 1350 GGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG 1426 (1490)
T ss_pred CCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC
Confidence 346899999999999999999999999999999999999999999999875 4799999999974 5677999999986
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++.+|+.
T Consensus 1427 -G~ivE~g~p 1435 (1490)
T TIGR01271 1427 -SSVKQYDSI 1435 (1490)
T ss_pred -CEEEEeCCH
Confidence 899999985
No 30
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.4e-61 Score=605.45 Aligned_cols=460 Identities=18% Similarity=0.257 Sum_probs=344.3
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|. ..+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 45999999999999999999999999999999999998761 128999999998865432 3569999999989999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccc-cccccCc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCA-DTMVGDE 319 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~-dt~vg~~ 319 (1444)
+||+||+.++......+...+ . .+...+++.+++.+||++.. +..+
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~~------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~~--- 139 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRMA------Y------------------------NAMYLRAKNLLRELQLDADNVTRPV--- 139 (500)
T ss_pred CcHHHHHHhhccccccccccC------H------------------------HHHHHHHHHHHHHcCCCCCcccCch---
Confidence 999999988643210000000 0 00122456789999998654 3333
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
+.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.++||+|++|+
T Consensus 140 --~~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tviiitHd~~~~~~~~d~i~~l~ 215 (500)
T TIGR02633 140 --GDYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-H-GVACVYISHKLNEVKAVCDTICVIR 215 (500)
T ss_pred --hhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCcHHHHHHhCCEEEEEe
Confidence 46999999999999999999999999999999999999999999999864 3 4456668889999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhhHHhhc
Q 000524 400 DGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELR 479 (1444)
Q Consensus 400 ~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 479 (1444)
+|++++.|+.+++.. ....+.
T Consensus 216 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~--------------- 236 (500)
T TIGR02633 216 DGQHVATKDMSTMSE--------------------------------------------DDIITM--------------- 236 (500)
T ss_pred CCeEeeecCcccCCH--------------------------------------------HHHHHH---------------
Confidence 999987664321100 000000
Q ss_pred CcccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccccchhHHH
Q 000524 480 TPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAG 559 (1444)
Q Consensus 480 ~~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g 559 (1444)
+. + .
T Consensus 237 -------------------------------------------------------------~~--~--~----------- 240 (500)
T TIGR02633 237 -------------------------------------------------------------MV--G--R----------- 240 (500)
T ss_pred -------------------------------------------------------------Hh--C--c-----------
Confidence 00 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCCHhHHHHH
Q 000524 560 ALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQ 639 (1444)
Q Consensus 560 ~lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~ 639 (1444)
+
T Consensus 241 ------------------------~------------------------------------------------------- 241 (500)
T TIGR02633 241 ------------------------E------------------------------------------------------- 241 (500)
T ss_pred ------------------------c-------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHHHHhhcCC
Q 000524 640 YLLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIVANEFLGY 719 (1444)
Q Consensus 640 ~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~ 719 (1444)
.+
T Consensus 242 ---------------------------------------------------~~--------------------------- 243 (500)
T TIGR02633 242 ---------------------------------------------------IT--------------------------- 243 (500)
T ss_pred ---------------------------------------------------cc---------------------------
Confidence 00
Q ss_pred cccccCCCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccccccccccccc
Q 000524 720 SWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRG 799 (1444)
Q Consensus 720 ~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1444)
. ... .
T Consensus 244 ---~----------------------------------------------------~~~--------------------~ 248 (500)
T TIGR02633 244 ---S----------------------------------------------------LYP--------------------H 248 (500)
T ss_pred ---c----------------------------------------------------ccc--------------------c
Confidence 0 000 0
Q ss_pred ccccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchhhhhccccCCceEEeeccE
Q 000524 800 TVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLS 879 (1444)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs 879 (1444)
. . . +. ...-+.++|+++.+... +++.+|+|+|
T Consensus 249 -------------~------~-------~----~~--------~~~~l~~~~l~~~~~~~----------~~~~~l~~is 280 (500)
T TIGR02633 249 -------------E------P-------H----EI--------GDVILEARNLTCWDVIN----------PHRKRVDDVS 280 (500)
T ss_pred -------------c------c-------c----CC--------CCceEEEeCCccccccc----------ccccccccce
Confidence 0 0 0 00 00125666666543100 1235899999
Q ss_pred EEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc----ccccceEEEEecCC---CCCCCCcHHHH
Q 000524 880 GAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IHSPFVTVYES 952 (1444)
Q Consensus 880 ~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~---~~~~~lTv~e~ 952 (1444)
+++++||++||+|||||||||||++|+|...+ +.+|+|.++|.++.. ...++.+||++|+. .+++.+||+|+
T Consensus 281 ~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~ 359 (500)
T TIGR02633 281 FSLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKN 359 (500)
T ss_pred eEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHH
Confidence 99999999999999999999999999998642 137999999987642 12345689999995 47889999999
Q ss_pred HHHHHH--hcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000524 953 LLYSAW--LRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1444)
Q Consensus 953 l~f~a~--lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgL 1029 (1444)
+.+... ............++.++++++.+++.+ ..++.+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~L 434 (500)
T TIGR02633 360 ITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGV 434 (500)
T ss_pred hcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCc
Confidence 987532 111001122334456889999999964 456654 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCC
Q 000524 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1085 (1444)
Q Consensus 1030 D~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~ 1085 (1444)
|+.++..+++.|++++++|.|||+++|++. ++.+.||++++|++ |+++..++..
T Consensus 435 D~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 488 (500)
T TIGR02633 435 DVGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVNH 488 (500)
T ss_pred CHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEccc
Confidence 999999999999999888999999999986 68889999999985 7888877653
No 31
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-61 Score=602.51 Aligned_cols=453 Identities=21% Similarity=0.303 Sum_probs=343.1
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 35999999999999999999999999999999999999987 9999999998754322 3579999999989999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||+||+.++......+. . + ..+....++.+++.+||++..+..+
T Consensus 94 ~tv~~~l~~~~~~~~~~~----~----------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~---- 138 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGI----V----------------N-----------RRLLNYEAREQLEHLGVDIDPDTPL---- 138 (501)
T ss_pred CCHHHHHHhcccccccCC----C----------------C-----------HHHHHHHHHHHHHHcCCCCCcCCch----
Confidence 999999998532100000 0 0 0011224567899999987666544
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ . +++|+.++|+..++.+++|+|++|++
T Consensus 139 -~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tiiiitHd~~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 139 -KYLSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-E-GRVILYVSHRMEEIFALCDAITVFKD 215 (501)
T ss_pred -hhCCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999999864 3 44566688888899999999999999
Q ss_pred CeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhhHHhhcC
Q 000524 401 GQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELRT 480 (1444)
Q Consensus 401 G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 480 (1444)
|+++..++..+. .+.++..+.
T Consensus 216 G~i~~~~~~~~~-------------------------------------------~~~~~~~~~---------------- 236 (501)
T PRK11288 216 GRYVATFDDMAQ-------------------------------------------VDRDQLVQA---------------- 236 (501)
T ss_pred CEEEeecCcccc-------------------------------------------CCHHHHHHH----------------
Confidence 999865421000 000000000
Q ss_pred cccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccccchhHHHH
Q 000524 481 PFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAGA 560 (1444)
Q Consensus 481 ~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g~ 560 (1444)
+. . .. .
T Consensus 237 ------------------------------------------------------------~~--~--~~-~--------- 242 (501)
T PRK11288 237 ------------------------------------------------------------MV--G--RE-I--------- 242 (501)
T ss_pred ------------------------------------------------------------hc--C--CC-c---------
Confidence 00 0 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCCHhHHHHHH
Q 000524 561 LFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQY 640 (1444)
Q Consensus 561 lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~~ 640 (1444)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHHHHhhcCCc
Q 000524 641 LLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIVANEFLGYS 720 (1444)
Q Consensus 641 l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~~ 720 (1444)
T Consensus 243 -------------------------------------------------------------------------------- 242 (501)
T PRK11288 243 -------------------------------------------------------------------------------- 242 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccccccccccccc
Q 000524 721 WKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRGT 800 (1444)
Q Consensus 721 ~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1444)
.. . ..
T Consensus 243 ---------------------------------------------------------~~----------------~-~~- 247 (501)
T PRK11288 243 ---------------------------------------------------------GD----------------I-YG- 247 (501)
T ss_pred ---------------------------------------------------------cc----------------c-cc-
Confidence 00 0 00
Q ss_pred cccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchhhhhccccCCceEEeeccEE
Q 000524 801 VQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSG 880 (1444)
Q Consensus 801 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~ 880 (1444)
. . . ... .+..+.++|+++ ..+++|+|+
T Consensus 248 ------------~------~-------~---~~~--------~~~~l~~~~~~~-----------------~~~l~~isl 274 (501)
T PRK11288 248 ------------Y------R-------P---RPL--------GEVRLRLDGLKG-----------------PGLREPISF 274 (501)
T ss_pred ------------c------c-------c---cCC--------CCcEEEEecccc-----------------CCcccceeE
Confidence 0 0 0 000 011355666642 138999999
Q ss_pred EEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc----ccccceEEEEecCC---CCCCCCcHHHHH
Q 000524 881 AFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQND---IHSPFVTVYESL 953 (1444)
Q Consensus 881 ~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~---~~~~~lTv~e~l 953 (1444)
++++||++||+||||||||||+++|+|... +.+|+|.++|.+... ...++.++|++|++ .+++.+|+.|++
T Consensus 275 ~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l 352 (501)
T PRK11288 275 SVRAGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNI 352 (501)
T ss_pred EEeCCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHh
Confidence 999999999999999999999999999865 347999999986542 12245689999986 478889999999
Q ss_pred HHHHHhcC-CCC--CCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000524 954 LYSAWLRL-PPE--VDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1444)
Q Consensus 954 ~f~a~lr~-~~~--~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgL 1029 (1444)
.+...... +.. ......++.++++++.+++. +..++.+ ..|||||||||+||++|+.+|++|||||||+||
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~L 427 (501)
T PRK11288 353 NISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGI 427 (501)
T ss_pred ccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCC
Confidence 87532111 000 01222345688999999994 5667764 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCCcch
Q 000524 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGRHS 1088 (1444)
Q Consensus 1030 D~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~~~~ 1088 (1444)
|..+...+++.|+++++.|.|||+++|++. ++.+.+|++++|++ |++++.|..++.+
T Consensus 428 D~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~~~ 484 (501)
T PRK11288 428 DVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQAT 484 (501)
T ss_pred CHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEccccCC
Confidence 999999999999999888999999999986 68889999999985 7999999876443
No 32
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-60 Score=592.71 Aligned_cols=450 Identities=17% Similarity=0.254 Sum_probs=340.4
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 46999999999999999999999999999999999999987 9999999998754322 3569999999988999
Q ss_pred CCHHHHHHHhhh-hcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000524 241 MTVRETLAFSAR-CQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1444)
Q Consensus 241 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1444)
+||+||+.++.. ..+... +. .+....++.+++.+||++..+..+
T Consensus 88 ~tv~~~l~~~~~~~~~~~~---------------------~~-----------~~~~~~~~~~l~~~~l~~~~~~~~--- 132 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFV---------------------DQ-----------DKMYRDTKAIFDELDIDIDPRAKV--- 132 (491)
T ss_pred CCHHHHhhccccccccccc---------------------CH-----------HHHHHHHHHHHHHcCCCCCccCch---
Confidence 999999987532 110000 00 001123567889999987766555
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
..|||||||||+||++|+.+|++|+|||||+|||+.+..++.+.|+++++ .+ .+|+.++|+.+++.++||+|++|+
T Consensus 133 --~~LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g-~tvii~tH~~~~~~~~~d~i~~l~ 208 (491)
T PRK10982 133 --ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-RG-CGIVYISHKMEEIFQLCDEITILR 208 (491)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CC-CEEEEEecCHHHHHHhCCEEEEEE
Confidence 46999999999999999999999999999999999999999999999864 34 455567888899999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhhHHhhc
Q 000524 400 DGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELR 479 (1444)
Q Consensus 400 ~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 479 (1444)
+|+++..|+.+++.. ++..+.+
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~~-------------- 230 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIAMM-------------- 230 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHHHH--------------
Confidence 999998876432100 0000000
Q ss_pred CcccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccccchhHHH
Q 000524 480 TPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAG 559 (1444)
Q Consensus 480 ~~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g 559 (1444)
. + ..
T Consensus 231 --------------------------------------------------------------~--~--~~---------- 234 (491)
T PRK10982 231 --------------------------------------------------------------V--G--RS---------- 234 (491)
T ss_pred --------------------------------------------------------------h--C--CC----------
Confidence 0 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCCHhHHHHH
Q 000524 560 ALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQ 639 (1444)
Q Consensus 560 ~lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~ 639 (1444)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHHHHhhcCC
Q 000524 640 YLLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIVANEFLGY 719 (1444)
Q Consensus 640 ~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~ 719 (1444)
.
T Consensus 235 ---------------------------------------------------~---------------------------- 235 (491)
T PRK10982 235 ---------------------------------------------------L---------------------------- 235 (491)
T ss_pred ---------------------------------------------------c----------------------------
Confidence 0
Q ss_pred cccccCCCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccccccccccccc
Q 000524 720 SWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRG 799 (1444)
Q Consensus 720 ~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1444)
. ... .
T Consensus 236 ---~---------------------------------------------------~~~---------------------~ 240 (491)
T PRK10982 236 ---T---------------------------------------------------QRF---------------------P 240 (491)
T ss_pred ---c---------------------------------------------------ccc---------------------c
Confidence 0 000 0
Q ss_pred ccccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchhhhhccccCCceEEeeccE
Q 000524 800 TVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLS 879 (1444)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs 879 (1444)
.. . . . + .+..+.++|+++.. +.+|+|||
T Consensus 241 -------------~~-----~-------~----~-------~-~~~~i~~~~l~~~~---------------~~~l~~vs 268 (491)
T PRK10982 241 -------------DK-----E-------N----K-------P-GEVILEVRNLTSLR---------------QPSIRDVS 268 (491)
T ss_pred -------------cc-----c-------C----C-------C-CCcEEEEeCccccc---------------Ccccceee
Confidence 00 0 0 0 0 01136677776541 13899999
Q ss_pred EEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEEecCCC---CCCCCcHHHH
Q 000524 880 GAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQNDI---HSPFVTVYES 952 (1444)
Q Consensus 880 ~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~~---~~~~lTv~e~ 952 (1444)
+.+++||++||+||||||||||+++|+|...+ .+|+|.++|.++... ..++.++|++|+.. +++.+|+.++
T Consensus 269 l~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~ 346 (491)
T PRK10982 269 FDLHKGEILGIAGLVGAKRTDIVETLFGIREK--SAGTITLHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFN 346 (491)
T ss_pred EEEeCCcEEEEecCCCCCHHHHHHHHcCCCcC--CccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHh
Confidence 99999999999999999999999999998653 489999999876431 12455899999853 5778888777
Q ss_pred HHHHH--Hh-cCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000524 953 LLYSA--WL-RLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1444)
Q Consensus 953 l~f~a--~l-r~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsg 1028 (1444)
..+.. .. ...........++.+.++++.+++. +..++. +..||||||||++||++|+.+|+||+|||||+|
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~illLDEPt~g 421 (491)
T PRK10982 347 SLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRG 421 (491)
T ss_pred eehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcc
Confidence 43221 01 1000011223345678899999995 445555 357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCC
Q 000524 1029 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1085 (1444)
Q Consensus 1029 LD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~ 1085 (1444)
||+.+...+++.|+++.++|+|||+++|+++ ++.+.||++++|++ |+++..++..
T Consensus 422 LD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 476 (491)
T PRK10982 422 IDVGAKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDTK 476 (491)
T ss_pred cChhHHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEccc
Confidence 9999999999999999888999999999986 58889999999986 7888877654
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3.5e-59 Score=582.48 Aligned_cols=446 Identities=19% Similarity=0.250 Sum_probs=328.4
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCC--C--
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNH--I-- 238 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~--~-- 238 (1444)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.. +
T Consensus 17 ~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 93 (490)
T PRK10938 17 KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSP 93 (490)
T ss_pred eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhccc
Confidence 4899999999999999999999999999999999999987 9999999977643321 2458999998642 1
Q ss_pred ----CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccc
Q 000524 239 ----GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1444)
Q Consensus 239 ----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1444)
..+||+|++.+.. +...+++.+++.+||++..+.
T Consensus 94 ~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~l~~~~l~~~~~~ 131 (490)
T PRK10938 94 GEDDTGRTTAEIIQDEV------------------------------------------KDPARCEQLAQQFGITALLDR 131 (490)
T ss_pred chhhccccHHHhcccch------------------------------------------hHHHHHHHHHHHcCCHhhhhC
Confidence 1467777764310 001235677899999887776
Q ss_pred cccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCe
Q 000524 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1444)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1444)
.++ .|||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|+++++ .+ ++|+.++|+..++.+.+|+
T Consensus 132 ~~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tvii~tH~~~~~~~~~d~ 204 (490)
T PRK10938 132 RFK-----YLSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQ-SG-ITLVLVLNRFDEIPDFVQF 204 (490)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cC-CeEEEEeCCHHHHHhhCCE
Confidence 554 6999999999999999999999999999999999999999999999865 34 4555578888899999999
Q ss_pred EEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhh
Q 000524 395 IILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKI 474 (1444)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (1444)
|++|++|+++++|+.+++.+- +.+ . ....
T Consensus 205 v~~l~~G~i~~~~~~~~~~~~---------------~~~-------------------------~---~~~~-------- 233 (490)
T PRK10938 205 AGVLADCTLAETGEREEILQQ---------------ALV-------------------------A---QLAH-------- 233 (490)
T ss_pred EEEEECCEEEEeCCHHHHhcc---------------hhh-------------------------h---hhhh--------
Confidence 999999999999876643210 000 0 0000
Q ss_pred HHhhcCcccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccccc
Q 000524 475 SDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDG 554 (1444)
Q Consensus 475 ~~~l~~~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~~~ 554 (1444)
.+ .... .
T Consensus 234 -----------------------------------~~---------------------------------~~~~--~--- 240 (490)
T PRK10938 234 -----------------------------------SE---------------------------------QLEG--V--- 240 (490)
T ss_pred -----------------------------------hh---------------------------------ccCc--c---
Confidence 00 0000 0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCCHh
Q 000524 555 GIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAG 634 (1444)
Q Consensus 555 ~~~~g~lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~ 634 (1444)
T Consensus 241 -------------------------------------------------------------------------------- 240 (490)
T PRK10938 241 -------------------------------------------------------------------------------- 240 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHHHH
Q 000524 635 RFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIVAN 714 (1444)
Q Consensus 635 ~ff~~~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~n 714 (1444)
..|
T Consensus 241 -------------------------------------------------------~~~---------------------- 243 (490)
T PRK10938 241 -------------------------------------------------------QLP---------------------- 243 (490)
T ss_pred -------------------------------------------------------ccC----------------------
Confidence 000
Q ss_pred hhcCCcccccCCCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCcccccccccccccc
Q 000524 715 EFLGYSWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQD 794 (1444)
Q Consensus 715 ef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 794 (1444)
. . .
T Consensus 244 ----------------------------------------------------------------~--~-------~---- 246 (490)
T PRK10938 244 ----------------------------------------------------------------E--P-------D---- 246 (490)
T ss_pred ----------------------------------------------------------------c--c-------c----
Confidence 0 0 0
Q ss_pred cccccccccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchhhhhccccCCceEE
Q 000524 795 NRIRGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVL 874 (1444)
Q Consensus 795 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~i 874 (1444)
.. . . ... .. ....-++++|+++.++ ++.+
T Consensus 247 ---~~-------------~------~--------~~~-~~-------~~~~~l~~~~l~~~~~-------------~~~i 275 (490)
T PRK10938 247 ---EP-------------S------A--------RHA-LP-------ANEPRIVLNNGVVSYN-------------DRPI 275 (490)
T ss_pred ---cc-------------c------c--------ccc-cC-------CCCceEEEeceEEEEC-------------CeeE
Confidence 00 0 0 000 00 0011378888887763 2359
Q ss_pred eeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc----ccccceEEEEecCCCCCC--CCc
Q 000524 875 LNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ----ETFARISGYCEQNDIHSP--FVT 948 (1444)
Q Consensus 875 L~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~----~~~~~~~gyv~q~~~~~~--~lT 948 (1444)
|+|+|+.+++||+++|+||||||||||+++|+|.... ..+|+|.++|.+... ...++.+||++|++.... ..|
T Consensus 276 l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~ 354 (490)
T PRK10938 276 LHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQ-GYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTS 354 (490)
T ss_pred EeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCc-ccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCc
Confidence 9999999999999999999999999999999996421 137999999976422 123456899999875543 256
Q ss_pred HHHHHHHHHHh--cCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000524 949 VYESLLYSAWL--RLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1025 (1444)
Q Consensus 949 v~e~l~f~a~l--r~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEP 1025 (1444)
+++.+.+...- ....... ...++.++++++.++|.+ ..++.+ ..||||||||++||++|+.+|++|+||||
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~la~al~~~p~lllLDEP 428 (490)
T PRK10938 355 VRNVILSGFFDSIGIYQAVS-DRQQKLAQQWLDILGIDKRTADAPF-----HSLSWGQQRLALIVRALVKHPTLLILDEP 428 (490)
T ss_pred HHHHHHhccccccccccCCC-HHHHHHHHHHHHHcCCchhhccCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCc
Confidence 77766543211 1111111 223456889999999987 666653 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCCHHHHH-hcceEEEEecCcEEEEE
Q 000524 1026 TSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPGIDIFD-AFDELFLMKRGGQEIYV 1081 (1444)
Q Consensus 1026 TsgLD~~s~~~i~~~l~~~~~~g-~tvi~t~Hqps~~i~~-~fD~v~ll~~gg~~~y~ 1081 (1444)
|+|||+.+...+++.|++++++| .|||+++|++. ++.+ .+|++++|++ |++++.
T Consensus 429 t~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~-~~~~~~~d~v~~l~~-G~i~~~ 484 (490)
T PRK10938 429 LQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAE-DAPACITHRLEFVPD-GDIYRY 484 (490)
T ss_pred cccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchh-hhhhhhheeEEEecC-CceEEe
Confidence 99999999999999999998775 47999999986 4655 5899999986 676654
No 34
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.4e-57 Score=506.97 Aligned_cols=470 Identities=25% Similarity=0.320 Sum_probs=365.2
Q ss_pred ccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCeecEEEECCccCCCCCcc-------ceEEEEcC
Q 000524 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFVPE-------RTAAYISQ 233 (1444)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~~~~-------~~~~yv~Q 233 (1444)
....++++|||.+++||.++|+|.||||||-..+.+.|+++.. ...+|+|.|+|.++-....+ ..|+.++|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 3467999999999999999999999999999999999998763 45689999999997554332 47999999
Q ss_pred CC--CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccc
Q 000524 234 HD--NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVC 311 (1444)
Q Consensus 234 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1444)
+| .+.|-.|+..-|.-..+++.... +..++.++-++|+..|+++-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg~~---------------------------------~~~Ar~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRGLS---------------------------------RAAARARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhccc---------------------------------HHHHHHHHHHHHHHcCCCch
Confidence 98 45676777777766555532111 11234456778999999876
Q ss_pred ccccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhh
Q 000524 312 ADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDL 391 (1444)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1444)
...+ +..+..|||||||||.||.||+.+|++|+-||||++||.....+|.+.|+++-.+. +..++.|+|+..-+-.+
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~-gMa~lfITHDL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAEL-GMAILFITHDLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHh-CcEEEEEeccHHHHHHh
Confidence 5433 46788999999999999999999999999999999999999999999999987654 56667799999999999
Q ss_pred cCeEEEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcch
Q 000524 392 FDDIILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVG 471 (1444)
Q Consensus 392 fD~vilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 471 (1444)
+|+|++|.+|++|++|+.+++.. .|.+ ||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHH-----------------
Confidence 99999999999999998776521 1100 000
Q ss_pred hhhHHhhcCcccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCcc
Q 000524 472 QKISDELRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSL 551 (1444)
Q Consensus 472 ~~~~~~l~~~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~ 551 (1444)
|.++.
T Consensus 255 ---------------------------------------r~Ll~------------------------------------ 259 (534)
T COG4172 255 ---------------------------------------RKLLA------------------------------------ 259 (534)
T ss_pred ---------------------------------------HHHHh------------------------------------
Confidence 00000
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCC
Q 000524 552 TDGGIYAGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDP 631 (1444)
Q Consensus 552 ~~~~~~~g~lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~ 631 (1444)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHH
Q 000524 632 NAGRFFKQYLLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAI 711 (1444)
Q Consensus 632 ~~~~ff~~~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al 711 (1444)
+
T Consensus 260 ---------------------------a---------------------------------------------------- 260 (534)
T COG4172 260 ---------------------------A---------------------------------------------------- 260 (534)
T ss_pred ---------------------------c----------------------------------------------------
Confidence 0
Q ss_pred HHHhhcCCcccccCCCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccccc
Q 000524 712 VANEFLGYSWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESN 791 (1444)
Q Consensus 712 ~~nef~~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 791 (1444)
.|
T Consensus 261 -------------eP----------------------------------------------------------------- 262 (534)
T COG4172 261 -------------EP----------------------------------------------------------------- 262 (534)
T ss_pred -------------CC-----------------------------------------------------------------
Confidence 00
Q ss_pred ccccccccccccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchhhhhccccCCc
Q 000524 792 KQDNRIRGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDK 871 (1444)
Q Consensus 792 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 871 (1444)
.+ . .. ...+..+.-+..+|++..++.+..+-. ...+.
T Consensus 263 --------------~g-----~--------------~~--------p~~~~~~~ll~~~~v~v~f~i~~g~~~--r~~~~ 299 (534)
T COG4172 263 --------------SG-----D--------------PP--------PLPEDAPVLLEVEDLRVWFPIKGGFLR--RTVDH 299 (534)
T ss_pred --------------CC-----C--------------CC--------CCCCCCCceEEecceEEEEecCCcccc--ccchh
Confidence 00 0 00 000001234555666555554322111 01234
Q ss_pred eEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc------cccceEEEEecCCC--C
Q 000524 872 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE------TFARISGYCEQNDI--H 943 (1444)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~------~~~~~~gyv~q~~~--~ 943 (1444)
..++++||+..++||.+||+|.||||||||-.+|.+...+ +|+|.++|.++... ..++.+-.|+||+. +
T Consensus 300 ~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSL 376 (534)
T COG4172 300 LRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSL 376 (534)
T ss_pred eEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhceEEEeCCCCCC
Confidence 5799999999999999999999999999999999987643 59999999987542 35677889999985 6
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEE
Q 000524 944 SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1022 (1444)
Q Consensus 944 ~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illL 1022 (1444)
.|.+||.|-+.-+.....| ..+..+++++|.++|+.+||++. ++.. ...+|||||||++|||||+-+|++++|
T Consensus 377 sPRmtV~qII~EGL~vh~~-~ls~~eR~~rv~~aL~EVGLDp~~r~RY-----PhEFSGGQRQRIAIARAliLkP~~i~L 450 (534)
T COG4172 377 SPRMTVGQIIEEGLRVHEP-KLSAAERDQRVIEALEEVGLDPATRNRY-----PHEFSGGQRQRIAIARALILKPELILL 450 (534)
T ss_pred CcccCHHHHhhhhhhhcCC-CCCHHHHHHHHHHHHHHcCCChhHhhcC-----CcccCcchhhHHHHHHHHhcCCcEEEe
Confidence 7999999988777666554 45778899999999999999873 3332 468999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1023 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1023 DEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|||||.||-.-+.+|.+.||++.++ |-+-++++||.. -+-.+||+|+||++ |++|..||.
T Consensus 451 DEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 451 DEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred cCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 9999999999999999999999755 899999999986 47789999999985 899999996
No 35
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=9.3e-57 Score=566.77 Aligned_cols=201 Identities=21% Similarity=0.282 Sum_probs=164.1
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
-+.++|+++.+. ++.+|+|||++|++||+++|+||||||||||+++|+|...+ .+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSFG-------------DRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQP--DSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEEC-------------CeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECC-c-
Confidence 488999988763 24699999999999999999999999999999999997653 479999854 1
Q ss_pred CcccccceEEEEecCC-CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHH
Q 000524 926 KQETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQ 1003 (1444)
Q Consensus 926 ~~~~~~~~~gyv~q~~-~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGq 1003 (1444)
..+||++|+. .+++.+||+|++.+....+.. ... ...++++++.+++.+ ..+.. +..|||||
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~---~~~--~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~ 450 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIKV---GNR--EIPSRAYVGRFNFKGGDQQKK-----VGVLSGGE 450 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhcccccc---ccc--HHHHHHHHHhCCCChhHhcCc-----hhhCCHHH
Confidence 1489999996 677889999999876432211 111 123457899999964 45555 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEE-EEc
Q 000524 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI-YVG 1082 (1444)
Q Consensus 1004 rkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~-y~G 1082 (1444)
|||++||++|+.+|++|+|||||+|||+.+...+++.|+++. .|||+++|++. .+...||++++|++||+++ +.|
T Consensus 451 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g 526 (556)
T PRK11819 451 RNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP---GCAVVISHDRW-FLDRIATHILAFEGDSQVEWFEG 526 (556)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC---CeEEEEECCHH-HHHHhCCEEEEEECCCeEEEecC
Confidence 999999999999999999999999999999999999999872 48999999986 5778899999998767776 455
Q ss_pred C
Q 000524 1083 P 1083 (1444)
Q Consensus 1083 ~ 1083 (1444)
+
T Consensus 527 ~ 527 (556)
T PRK11819 527 N 527 (556)
T ss_pred C
Confidence 4
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-56 Score=564.45 Aligned_cols=198 Identities=19% Similarity=0.272 Sum_probs=164.3
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.
T Consensus 319 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p--~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGFD-------------NGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEP--DSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEeeC-------------CceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCc--
Confidence 488999988773 23599999999999999999999999999999999997653 4799999873
Q ss_pred CcccccceEEEEecCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHH
Q 000524 926 KQETFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 926 ~~~~~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgG 1002 (1444)
+.+||++|+.. +.+.+|++|++.+. .... ..++.++++++.+++. +..+.. +..||||
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~---~~~~-----~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG 442 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQW---RQEG-----DDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGG 442 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHh---ccCC-----ccHHHHHHHHHHcCCChhHhcCc-----ccccCHH
Confidence 45899999864 45679999998642 1111 1134578899999994 556655 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEE-EE
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI-YV 1081 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~-y~ 1081 (1444)
||||++||++|+.+|+||+|||||+|||+.+...+++.|+++ +.|||+++|++. .+...||++++|++ |+++ +.
T Consensus 443 q~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~ 517 (530)
T PRK15064 443 EKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFS 517 (530)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcC
Confidence 999999999999999999999999999999999999999886 459999999986 57788999999996 6666 77
Q ss_pred cCC
Q 000524 1082 GPL 1084 (1444)
Q Consensus 1082 G~~ 1084 (1444)
|+.
T Consensus 518 g~~ 520 (530)
T PRK15064 518 GTY 520 (530)
T ss_pred CCH
Confidence 764
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=3.9e-56 Score=561.19 Aligned_cols=201 Identities=20% Similarity=0.280 Sum_probs=163.7
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|+++.+. ++.+|+|+|+.|++|++++|+||||||||||+++|+|...+ .+|+|.+++ +
T Consensus 322 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~~-~- 384 (552)
T TIGR03719 322 VIEAENLSKGFG-------------DKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQP--DSGTIKIGE-T- 384 (552)
T ss_pred EEEEeeEEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCeEEEECC-c-
Confidence 478899987763 24699999999999999999999999999999999997653 479999854 1
Q ss_pred CcccccceEEEEecCC-CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHH
Q 000524 926 KQETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQ 1003 (1444)
Q Consensus 926 ~~~~~~~~~gyv~q~~-~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGq 1003 (1444)
..+||++|+. .+++.+||.|++.+...... .... +..+.++++.+++.+ ..+..+ ..|||||
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~---~~~~--~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 448 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQ---LGKR--EVPSRAYVGRFNFKGSDQQKKV-----GQLSGGE 448 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccc---cCcc--hHHHHHHHHhCCCChhHhcCch-----hhCCHHH
Confidence 1489999986 46788999999987642211 1111 123567899999964 455553 5799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEE-EEc
Q 000524 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI-YVG 1082 (1444)
Q Consensus 1004 rkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~-y~G 1082 (1444)
|||++||++|+.+|++|+|||||+|||+.+...+++.|+++. .|||+++|++. .+...||++++|++||+++ +.|
T Consensus 449 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g 524 (552)
T TIGR03719 449 RNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEG 524 (552)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCC
Confidence 999999999999999999999999999999999999999872 48999999986 5778899999998767776 445
Q ss_pred C
Q 000524 1083 P 1083 (1444)
Q Consensus 1083 ~ 1083 (1444)
+
T Consensus 525 ~ 525 (552)
T TIGR03719 525 N 525 (552)
T ss_pred C
Confidence 4
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.3e-54 Score=544.16 Aligned_cols=211 Identities=20% Similarity=0.234 Sum_probs=173.1
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|+++.++ + ..|+++|+++++||++||+||||||||||+++|+|...+ .+|+|.++
T Consensus 340 ~l~~~~ls~~~~-------------~-~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p--~~G~I~~~---- 399 (590)
T PRK13409 340 LVEYPDLTKKLG-------------D-FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKP--DEGEVDPE---- 399 (590)
T ss_pred EEEEcceEEEEC-------------C-EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEEe----
Confidence 377888876653 1 248999999999999999999999999999999998653 47999885
Q ss_pred CcccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000524 926 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 1005 (1444)
Q Consensus 926 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1005 (1444)
..++|++|+..+.+.+||+|++.+..... .. ...++++++.++|.+..++.+ ..|||||||
T Consensus 400 ------~~i~y~~Q~~~~~~~~tv~e~l~~~~~~~-----~~---~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~Q 460 (590)
T PRK13409 400 ------LKISYKPQYIKPDYDGTVEDLLRSITDDL-----GS---SYYKSEIIKPLQLERLLDKNV-----KDLSGGELQ 460 (590)
T ss_pred ------eeEEEecccccCCCCCcHHHHHHHHhhhc-----Ch---HHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHH
Confidence 14799999988888899999998742111 11 124688999999998777764 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1006 Rl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
||+||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|++. .+...+|++++|+ |+++..|..
T Consensus 461 RvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~--~~~~~~g~~ 537 (590)
T PRK13409 461 RVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIY-MIDYISDRLMVFE--GEPGKHGHA 537 (590)
T ss_pred HHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc--Ccceeeeec
Confidence 999999999999999999999999999999999999999765 899999999986 5778899999996 477777764
Q ss_pred Ccc---hhHHHHHHHhC
Q 000524 1085 GRH---SCQLISYFEAI 1098 (1444)
Q Consensus 1085 ~~~---~~~~~~yF~~~ 1098 (1444)
... ...+..|++.+
T Consensus 538 ~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 538 SGPMDMREGMNRFLKEL 554 (590)
T ss_pred CCchhHHHHHHHHHHHc
Confidence 322 13455677776
No 39
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-54 Score=545.48 Aligned_cols=197 Identities=21% Similarity=0.358 Sum_probs=160.7
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|...+ .+|+|.+++.
T Consensus 312 ~l~~~~l~~~y~-------------~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p--~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGYG-------------DRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAP--VSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCC--
Confidence 478899988763 24699999999999999999999999999999999998653 4799998641
Q ss_pred CcccccceEEEEecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHH
Q 000524 926 KQETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 926 ~~~~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgG 1002 (1444)
..+||++|+. .+.+..|+.+++.- . .. ......+.++++.+++.. ..++.+ ..||||
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~---~--~~----~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgG 434 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLAR---L--AP----QELEQKLRDYLGGFGFQGDKVTEET-----RRFSGG 434 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHH---h--Cc----hhhHHHHHHHHHHcCCChhHhcCch-----hhCCHH
Confidence 2589999974 24456677776531 1 11 112345789999999963 556654 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEE-EE
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI-YV 1081 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~-y~ 1081 (1444)
|||||+||++|+.+|++|+|||||+|||+.+...+.+.|+++ +.|||+++|++. .+...||++++|++ |+++ |.
T Consensus 435 ekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~---~gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~ 509 (638)
T PRK10636 435 EKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF---EGALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFD 509 (638)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcC
Confidence 999999999999999999999999999999999999999987 349999999986 57788999999986 6776 78
Q ss_pred cCC
Q 000524 1082 GPL 1084 (1444)
Q Consensus 1082 G~~ 1084 (1444)
|+.
T Consensus 510 g~~ 512 (638)
T PRK10636 510 GDL 512 (638)
T ss_pred CCH
Confidence 875
No 40
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.4e-53 Score=544.78 Aligned_cols=202 Identities=24% Similarity=0.331 Sum_probs=163.2
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
-+.++|+++.++ ++.+|+|+|+.|++|+++||+|||||||||||++|+|... +.+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQID-------------GKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEEC-------------CeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 478899988763 2469999999999999999999999999999999999765 34799988 4321
Q ss_pred CcccccceEEEEecCC-CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCHHH
Q 000524 926 KQETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLSTEQ 1003 (1444)
Q Consensus 926 ~~~~~~~~~gyv~q~~-~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSgGq 1003 (1444)
.+||++|+. .+++.+||.|++.+..... .... ....+.++++.+++. +..++.+ ..|||||
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~---~~~~--~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGe 445 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQEV---MVNG--RPRHVLGYLQDFLFHPKRAMTPV-----KALSGGE 445 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhcccc---cccc--hHHHHHHHHHhcCCCHHHHhChh-----hhCCHHH
Confidence 489999975 5778899999998753211 0111 123477889999985 4556554 5799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe-cCcEEEEEc
Q 000524 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK-RGGQEIYVG 1082 (1444)
Q Consensus 1004 rkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~-~gg~~~y~G 1082 (1444)
||||+||++|+.+|++|||||||+|||..+...+.+.|+++ +.|||+++|++. .+...||++++|+ +|.-..|.|
T Consensus 446 kqRl~la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g 521 (635)
T PRK11147 446 RNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVG 521 (635)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccC
Confidence 99999999999999999999999999999999999999876 469999999985 5778899999997 554455666
Q ss_pred CC
Q 000524 1083 PL 1084 (1444)
Q Consensus 1083 ~~ 1084 (1444)
+.
T Consensus 522 ~y 523 (635)
T PRK11147 522 GY 523 (635)
T ss_pred CH
Confidence 54
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.9e-53 Score=499.65 Aligned_cols=452 Identities=21% Similarity=0.332 Sum_probs=349.8
Q ss_pred ccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCcc----ceEEEEcCCCCCC
Q 000524 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE----RTAAYISQHDNHI 238 (1444)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1444)
...++|+|||+.++|||+++|+|.||||||||+|+|+|.++|+ +|+|.++|++.....|+ .-|+.|.|+..+.
T Consensus 19 ggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~ 95 (500)
T COG1129 19 GGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLV 95 (500)
T ss_pred CCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhcc
Confidence 4467999999999999999999999999999999999999998 99999999988766553 4688999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
|+|||.|||-++....... +-+ +.......+..+|+.+|+....++.|+
T Consensus 96 p~LsVaeNifLgre~~~~~---------------------g~i---------d~~~m~~~A~~~l~~lg~~~~~~~~v~- 144 (500)
T COG1129 96 PNLSVAENIFLGREPTRRF---------------------GLI---------DRKAMRRRARELLARLGLDIDPDTLVG- 144 (500)
T ss_pred CCccHHHHhhcccccccCC---------------------Ccc---------CHHHHHHHHHHHHHHcCCCCChhhhhh-
Confidence 9999999998875432100 000 001122346778999999755788887
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
.||+||||-|.||||+..++++++|||||++|+...+..+++.++++.. .+..||.++|..+|++++||+|.||
T Consensus 145 ----~LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~--~Gv~ii~ISHrl~Ei~~i~DritVl 218 (500)
T COG1129 145 ----DLSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA--QGVAIIYISHRLDEVFEIADRITVL 218 (500)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCCEEEEEcCcHHHHHHhcCEEEEE
Confidence 4999999999999999999999999999999999999999999999863 5677788999999999999999999
Q ss_pred cCCeEEEecCh-hhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhhHHh
Q 000524 399 SDGQIVYQGPR-ELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDE 477 (1444)
Q Consensus 399 ~~G~iv~~G~~-~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (1444)
.||+++..++. ++. +.+++.+
T Consensus 219 RDG~~v~~~~~~~~~--------------------------------------------~~~~lv~-------------- 240 (500)
T COG1129 219 RDGRVVGTRPTAAET--------------------------------------------SEDELVR-------------- 240 (500)
T ss_pred eCCEEeeecccccCC--------------------------------------------CHHHHHH--------------
Confidence 99999877652 211 0000000
Q ss_pred hcCcccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccccchhH
Q 000524 478 LRTPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIY 557 (1444)
Q Consensus 478 l~~~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~ 557 (1444)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T COG1129 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCCHhHHH
Q 000524 558 AGALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFF 637 (1444)
Q Consensus 558 ~g~lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff 637 (1444)
.|+|-
T Consensus 241 -------------------------------------------------------------------~MvGr-------- 245 (500)
T COG1129 241 -------------------------------------------------------------------LMVGR-------- 245 (500)
T ss_pred -------------------------------------------------------------------HhhCc--------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHHHHhhc
Q 000524 638 KQYLLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIVANEFL 717 (1444)
Q Consensus 638 ~~~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~ 717 (1444)
+
T Consensus 246 -----------------------------------------------------------------------------~-- 246 (500)
T COG1129 246 -----------------------------------------------------------------------------E-- 246 (500)
T ss_pred -----------------------------------------------------------------------------c--
Confidence 0
Q ss_pred CCcccccCCCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccccccccccc
Q 000524 718 GYSWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRI 797 (1444)
Q Consensus 718 ~~~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1444)
.+. . |
T Consensus 247 ---~~~-----------------------~-------------------------~------------------------ 251 (500)
T COG1129 247 ---LED-----------------------L-------------------------F------------------------ 251 (500)
T ss_pred ---hhh-----------------------h-------------------------c------------------------
Confidence 000 0 0
Q ss_pred ccccccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchhhhhccccCCceEEeec
Q 000524 798 RGTVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNG 877 (1444)
Q Consensus 798 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~ 877 (1444)
. . . ... ...+..+++++++. ...++|
T Consensus 252 -~---------------------------~--~-~~~------~~~~~~l~v~~l~~-----------------~~~~~d 277 (500)
T COG1129 252 -P---------------------------E--P-PEE------GIGEPVLEVRNLSG-----------------GGKVRD 277 (500)
T ss_pred -c---------------------------c--c-ccc------CCCCcEEEEecCCC-----------------CCceeC
Confidence 0 0 0 000 00011244444421 125789
Q ss_pred cEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEEecCCC---CCCCCcHH
Q 000524 878 LSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQNDI---HSPFVTVY 950 (1444)
Q Consensus 878 vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~~---~~~~lTv~ 950 (1444)
|||++++||++||-|-=|||+|-|+.+|.|... ...|+|.+||.+.... ..+.-++||+.|.. +++.++|.
T Consensus 278 vSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~ 355 (500)
T COG1129 278 VSFTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIA 355 (500)
T ss_pred ceeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHH
Confidence 999999999999999999999999999999543 3489999999986543 34567899998754 67889999
Q ss_pred HHHHHHHHhcCCC--CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000524 951 ESLLYSAWLRLPP--EVDSETRKMFIEEVMELVELKPLI-QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1027 (1444)
Q Consensus 951 e~l~f~a~lr~~~--~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTs 1027 (1444)
||+.++...+... -.+....++.+++..+.+++.... +.. +..||||.+||+.|||.|..+|+||+|||||.
T Consensus 356 ~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~-----v~~LSGGNQQKVvlarwL~~~p~vLilDEPTR 430 (500)
T COG1129 356 ENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQP-----IGTLSGGNQQKVVLARWLATDPKVLILDEPTR 430 (500)
T ss_pred HheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccch-----hhcCCchhhhhHHHHHHHhcCCCEEEECCCCc
Confidence 9998873333221 245555566788999999987532 232 46899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1028 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1028 gLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|+|.-+..+|.+++++++++|.+||+++-+.. |+..+||||++|++ |+++-.=+.
T Consensus 431 GIDVGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~e~~~ 485 (500)
T COG1129 431 GIDVGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVGELDR 485 (500)
T ss_pred CcccchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEEEecc
Confidence 99999999999999999999999999998874 89999999999996 787764333
No 42
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=3.1e-51 Score=499.47 Aligned_cols=220 Identities=28% Similarity=0.324 Sum_probs=173.4
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCCH
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 243 (1444)
.+++|+|+|+.+.+|+.++|+|+||||||||||+|+|.+.|+ +|+|...+ .-+++|++|++...+..||
T Consensus 15 ~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~tv 83 (530)
T COG0488 15 DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKTV 83 (530)
T ss_pred CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCccH
Confidence 467999999999999999999999999999999999999998 99998765 2379999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHH---HH-HHHHHhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDID---VY-MKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~---~~-~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1444)
.+.+.-+.. ..++...+..... ...++++.. .. ......++++.+.+++.++..||++.. ++.++
T Consensus 84 ~~~v~~~~~-----~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~-- 152 (530)
T COG0488 84 LDYVIEGFG-----ELRELLAELEEAY---ALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVS-- 152 (530)
T ss_pred HHHHHhhhH-----HHHHHHHHHHHHH---HhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchh--
Confidence 999987643 1122222222111 112222111 11 112233456677788999999999876 66555
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
.||||||.||+||++|+.+|++|+|||||++||..+..++-+.|++. .+ ++|.++|++...-+.|++|+-++
T Consensus 153 ---~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~----~g-tviiVSHDR~FLd~V~t~I~~ld 224 (530)
T COG0488 153 ---SLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY----PG-TVIVVSHDRYFLDNVATHILELD 224 (530)
T ss_pred ---hcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC----CC-cEEEEeCCHHHHHHHhhheEEec
Confidence 69999999999999999999999999999999999999999988753 34 56668999999999999999999
Q ss_pred CCeE-EEecChhhHH
Q 000524 400 DGQI-VYQGPRELVL 413 (1444)
Q Consensus 400 ~G~i-v~~G~~~~~~ 413 (1444)
.|++ .|.|+++...
T Consensus 225 ~g~l~~y~Gny~~~~ 239 (530)
T COG0488 225 RGKLTPYKGNYSSYL 239 (530)
T ss_pred CCceeEecCCHHHHH
Confidence 9987 4778777554
No 43
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.5e-51 Score=524.85 Aligned_cols=200 Identities=20% Similarity=0.273 Sum_probs=157.8
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|+++.++ +++.+|+|+|+.|++|++++|+|||||||||||++|+|...+ .+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p--~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQP--SSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCceEEECCc--
Confidence 488999988773 123599999999999999999999999999999999997653 4799988652
Q ss_pred CcccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHH
Q 000524 926 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 926 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGqr 1004 (1444)
..+||++|+. ...+++.++..+......+. .. ++.+.++++.+++.+ ..+.. +..||||||
T Consensus 572 ------~~igyv~Q~~--~~~l~~~~~~~~~~~~~~~~-~~----~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqk 633 (718)
T PLN03073 572 ------VRMAVFSQHH--VDGLDLSSNPLLYMMRCFPG-VP----EQKLRAHLGSFGVTGNLALQP-----MYTLSGGQK 633 (718)
T ss_pred ------eeEEEEeccc--cccCCcchhHHHHHHHhcCC-CC----HHHHHHHHHHCCCChHHhcCC-----ccccCHHHH
Confidence 3589999975 34456666543221111111 11 234788999999974 44544 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEE-EEcC
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI-YVGP 1083 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~-y~G~ 1083 (1444)
|||+||++|+.+|++|+|||||+|||+.+...+.+.|++. +.|||+++|++. .+...||++++|++ |+++ +.|+
T Consensus 634 qRvaLAraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~---~gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~ 708 (718)
T PLN03073 634 SRVAFAKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF---QGGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGT 708 (718)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc---CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCC
Confidence 9999999999999999999999999999999998888765 349999999986 57788999999986 7877 7775
Q ss_pred C
Q 000524 1084 L 1084 (1444)
Q Consensus 1084 ~ 1084 (1444)
.
T Consensus 709 ~ 709 (718)
T PLN03073 709 F 709 (718)
T ss_pred H
Confidence 4
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=7.8e-49 Score=453.18 Aligned_cols=457 Identities=22% Similarity=0.312 Sum_probs=355.2
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCcc----ceEEEEcCCCCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE----RTAAYISQHDNHIG 239 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1444)
...+++|||+.+++||+.+|+|.||||||||+++|.|.+.|+ +|+|.++|+++.-..|+ --||+|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 567999999999999999999999999999999999999998 99999999998765554 46899999999999
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000524 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1444)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1444)
++||.|||..+..-... .+ -| ......+++.+.+..||+-..|.+|++
T Consensus 93 ~lTV~ENiiLg~e~~~~-~~-------------------~~-----------~~~~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSKG-GL-------------------ID-----------RRQARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCccccc-cc-------------------cC-----------HHHHHHHHHHHHHHhCCCCCccceeec-
Confidence 99999999987642110 00 00 011234567889999999988888875
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
||-||||||.|-++|+.+|++|+|||||+-|-|....++++.|+++++ . +.+||.|+|-..|+.+.+|++.+|.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~-~-G~tIi~ITHKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA-E-GKTIIFITHKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeccHHHHHHhhCeeEEEe
Confidence 999999999999999999999999999999999999999999999875 3 4556668999999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhcCcchhhhhhcccCCCCccCCHHHHHHHHHhCcchhhhHHhhc
Q 000524 400 DGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVTSRKDQKQYWTHKEKPYRFVTVEEFAEAFQSFHVGQKISDELR 479 (1444)
Q Consensus 400 ~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 479 (1444)
.|+++-.-+. . ...+.+++++.
T Consensus 215 ~Gkvvgt~~~--~-----------------------------------------~~~t~~ela~l--------------- 236 (501)
T COG3845 215 RGKVVGTVDP--V-----------------------------------------AETTEEELAEL--------------- 236 (501)
T ss_pred CCeEEeeecC--C-----------------------------------------CCCCHHHHHHH---------------
Confidence 9998643210 0 00001111000
Q ss_pred CcccCcccccccccccccCCchHHHHHHHHHHHHHHhhcChhHHHHHHHHHHHHHHHHHHhhhccccCCCccccchhHHH
Q 000524 480 TPFDKSKSHRAALTTEVYGAGKRELLKTCISRELLLMKRNSFVYIFKLTQISSVALAFMTLFLRTKMHKHSLTDGGIYAG 559 (1444)
Q Consensus 480 ~~~~~~~~~~~~~~~~~y~~s~~~~~~~~~~R~~l~~~R~~~~~~~~~~~~~~~ali~gtlf~~~~~~~~~~~~~~~~~g 559 (1444)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcchhHHhhhcCCccChhhhHHHHHHHHhhHHHHHHHHHHhhhhhccccCCCHhHHHHH
Q 000524 560 ALFFATAMVMFNGLAEISMTIAKLPVFYKQRDFRFFPPWAYAIPSWILKIPISFLEVAVWVFLTYYVIGCDPNAGRFFKQ 639 (1444)
Q Consensus 560 ~lf~~~~~~~f~~~~~~~~~~~~~~vf~k~r~~~~y~~~ay~la~~l~~iP~~~~~~~i~~~i~Y~~~g~~~~~~~ff~~ 639 (1444)
|+|
T Consensus 237 ------------------------------------------------------------------MvG----------- 239 (501)
T COG3845 237 ------------------------------------------------------------------MVG----------- 239 (501)
T ss_pred ------------------------------------------------------------------hcC-----------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccCccchhhhHHHHHHHcHHHHHHHHHHHHhhcCC
Q 000524 640 YLLFLAVNQMASALFRLIAATGRSMVVANTFGTFALLVLFALGGFVLSREDIKKWWKWAYWCSPMSYAQNAIVANEFLGY 719 (1444)
Q Consensus 640 ~l~~~l~~~~~~~l~~~iaa~~~~~~~A~~~~~~~~l~~~l~~Gf~i~~~~ip~~~~w~~~isp~~y~~~al~~nef~~~ 719 (1444)
T Consensus 240 -------------------------------------------------------------------------------- 239 (501)
T COG3845 240 -------------------------------------------------------------------------------- 239 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCcccchHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCccccccccccccccccccc
Q 000524 720 SWKKFTPNSYESIGVQVLKSRGFFAHAYWYWLGLGALFGFILLFNLGFTMAITFLNQLEKPRAVITEESESNKQDNRIRG 799 (1444)
Q Consensus 720 ~~~~~~~~~~~~~g~~~L~~~~~~~~~~~~w~~~g~l~g~~v~f~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 799 (1444)
.++. ..
T Consensus 240 --------------~~v~------------------------------------------------------------~~ 245 (501)
T COG3845 240 --------------REVV------------------------------------------------------------LR 245 (501)
T ss_pred --------------Cccc------------------------------------------------------------cc
Confidence 0000 00
Q ss_pred ccccccCCCCCCcccCCCCCcchhhhhcccCCCCCccCcccCCCCceeEEeceeeeeecchhhhhccccCCceEEeeccE
Q 000524 800 TVQLSARGESGEDISGRNSSSKSLILTEAQGSHPKKRGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLS 879 (1444)
Q Consensus 800 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs 879 (1444)
. . ..+...+ +.-++++|++...+. ....+++||
T Consensus 246 -------------~--------------~--~~~~~pg------~~vL~V~~L~v~~~~------------~~~~v~~vs 278 (501)
T COG3845 246 -------------V--------------V--KPPSTPG------EVVLEVEDLSVKDRR------------GVTAVKDVS 278 (501)
T ss_pred -------------c--------------c--cCCCCCC------CeEEEEeeeEeecCC------------CCceeeeee
Confidence 0 0 0000000 124667777654321 235799999
Q ss_pred EEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC-C---c-ccccceEEEEecCCC---CCCCCcHHH
Q 000524 880 GAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK-K---Q-ETFARISGYCEQNDI---HSPFVTVYE 951 (1444)
Q Consensus 880 ~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~-~---~-~~~~~~~gyv~q~~~---~~~~lTv~e 951 (1444)
|++++||++||.|..|-|-+.|+.+|+|..+. ..|+|.++|.+. . . ...+.-++|||+|.. +.+.+|+.|
T Consensus 279 ~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~e 356 (501)
T COG3845 279 FEVRAGEIVGIAGVAGNGQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAE 356 (501)
T ss_pred eEEecCcEEEEEecCCCCHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHH
Confidence 99999999999999999999999999997643 249999999986 2 1 123456899999874 358899999
Q ss_pred HHHHHHHhcC----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000524 952 SLLYSAWLRL----PPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1027 (1444)
Q Consensus 952 ~l~f~a~lr~----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTs 1027 (1444)
|+.+...-+. ..-.+....++...++++.++.....-. ...+.||||++||+-+||||.++|++|+..+||.
T Consensus 357 N~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~~----~~a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTr 432 (501)
T COG3845 357 NLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSPD----APARSLSGGNQQKLILARELARRPDLLIAAQPTR 432 (501)
T ss_pred HhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCCC----cchhhcCCcceehhhhhhhhccCCCEEEEcCCCc
Confidence 9987643221 1124556667788999999998743211 1246899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCC
Q 000524 1028 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1085 (1444)
Q Consensus 1028 gLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~ 1085 (1444)
|||..+.+.|.+.|.+.++.|+.|++++-+.. |+++++|||.+|.+ |+++...+..
T Consensus 433 GLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~ 488 (501)
T COG3845 433 GLDVGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPE 488 (501)
T ss_pred cccHHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceecccccc
Confidence 99999999999999999999999999999986 89999999999995 8998887764
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-42 Score=363.35 Aligned_cols=221 Identities=26% Similarity=0.405 Sum_probs=187.1
Q ss_pred ccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCC----CccceEEEEcCCCCCC
Q 000524 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF----VPERTAAYISQHDNHI 238 (1444)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~----~~~~~~~yv~Q~d~~~ 238 (1444)
...++|+|||+.|++||+++|+|||||||||||++|.|+..++ +|+|.++|.++... ..|+.+|+|+|+..+|
T Consensus 13 g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLF 89 (240)
T COG1126 13 GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLF 89 (240)
T ss_pred CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeeccccccc
Confidence 4577999999999999999999999999999999999999998 99999999766421 2367899999999999
Q ss_pred CCCCHHHHHHHhhhh-cCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccccc
Q 000524 239 GEMTVRETLAFSARC-QGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1444)
|++||.||+..+-.. ++. ...+++.+..++|+.+||.+.+|.+.
T Consensus 90 PHlTvleNv~lap~~v~~~----------------------------------~k~eA~~~A~~lL~~VGL~~ka~~yP- 134 (240)
T COG1126 90 PHLTVLENVTLAPVKVKKL----------------------------------SKAEAREKALELLEKVGLADKADAYP- 134 (240)
T ss_pred ccchHHHHHHhhhHHHcCC----------------------------------CHHHHHHHHHHHHHHcCchhhhhhCc-
Confidence 999999999987431 110 11223445678899999999998654
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1444)
..|||||||||+|||||+.+|+++++|||||+|||+...++.+.++++++ .|.|. +.++|....+.+.+|||+.
T Consensus 135 ----~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~-eGmTM-ivVTHEM~FAr~VadrviF 208 (240)
T COG1126 135 ----AQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EGMTM-IIVTHEMGFAREVADRVIF 208 (240)
T ss_pred ----cccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH-cCCeE-EEEechhHHHHHhhheEEE
Confidence 57999999999999999999999999999999999999999999999986 44454 4478999999999999999
Q ss_pred EcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHh
Q 000524 398 LSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQE 435 (1444)
Q Consensus 398 L~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~ 435 (1444)
|++|+++.+|+++++ |..|.+.-..+|+..
T Consensus 209 md~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 209 MDQGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred eeCCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 999999999999876 455665556666654
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-42 Score=360.38 Aligned_cols=214 Identities=26% Similarity=0.381 Sum_probs=188.2
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|++.++ +...+|+|||++|++||+++|+|||||||||||++|.+... +.+|+|.++|.+..
T Consensus 3 i~i~~l~K~f-------------g~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~ 67 (240)
T COG1126 3 IEIKNLSKSF-------------GDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVG 67 (240)
T ss_pred EEEEeeeEEe-------------CCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEecc
Confidence 5677777666 35689999999999999999999999999999999999866 34899999996543
Q ss_pred c----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 927 Q----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 927 ~----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
. ...|+.+|+|+|+..+||++||.||+..+-..- ...++++.++...+.|+.+||.+.+|.. +..||||
T Consensus 68 ~~~~~~~~R~~vGmVFQ~fnLFPHlTvleNv~lap~~v--~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----P~qLSGG 140 (240)
T COG1126 68 DKKDILKLRRKVGMVFQQFNLFPHLTVLENVTLAPVKV--KKLSKAEAREKALELLEKVGLADKADAY-----PAQLSGG 140 (240)
T ss_pred chhhHHHHHHhcCeecccccccccchHHHHHHhhhHHH--cCCCHHHHHHHHHHHHHHcCchhhhhhC-----ccccCcH
Confidence 2 346788999999999999999999999874322 2345666777789999999999999987 4679999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
|||||+|||||+.+|+++++|||||.|||+...+|.+.+++++++|.|+||+||.... .-+.+|||+.|++ |+++..|
T Consensus 141 QqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g 218 (240)
T COG1126 141 QQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEG 218 (240)
T ss_pred HHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEec
Confidence 9999999999999999999999999999999999999999999999999999999874 6678999999985 8999999
Q ss_pred CC
Q 000524 1083 PL 1084 (1444)
Q Consensus 1083 ~~ 1084 (1444)
++
T Consensus 219 ~p 220 (240)
T COG1126 219 PP 220 (240)
T ss_pred CH
Confidence 75
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.5e-41 Score=392.73 Aligned_cols=202 Identities=20% Similarity=0.274 Sum_probs=155.1
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..+.++|+++.++. +..++++++|-+.+++.+|++||||+|||||||++.|...+ ..|.|.-.-+.
T Consensus 388 pvi~~~nv~F~y~~------------~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p--~~G~vs~~~H~ 453 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSD------------NPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQP--TIGMVSRHSHN 453 (614)
T ss_pred CeEEEeccccCCCC------------cchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccc--ccccccccccc
Confidence 45788999887752 22589999999999999999999999999999999997653 46766543221
Q ss_pred CCcccccceEEEEecC--CCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 925 KKQETFARISGYCEQN--DIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 925 ~~~~~~~~~~gyv~q~--~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
..++-.|. +.+.-..++-|+++=. .+ .+.+.+.+..++..+||....+.. ..+.||+|
T Consensus 454 --------~~~~y~Qh~~e~ldl~~s~le~~~~~----~~----~~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~G 513 (614)
T KOG0927|consen 454 --------KLPRYNQHLAEQLDLDKSSLEFMMPK----FP----DEKELEEMRSILGRFGLTGDAQVV----PMSQLSDG 513 (614)
T ss_pred --------cchhhhhhhHhhcCcchhHHHHHHHh----cc----ccchHHHHHHHHHHhCCCcccccc----chhhcccc
Confidence 12222332 2222345666655311 11 133455688899999999544443 25789999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
||+||.+|+.++..|.||+|||||+|||..+...+-++|.+. ..+||.++|+-.. |-+.++++.+..+++...+.|
T Consensus 514 qr~rVlFa~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~G 589 (614)
T KOG0927|consen 514 QRRRVLFARLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWDG 589 (614)
T ss_pred cchhHHHHHHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecCc
Confidence 999999999999999999999999999999999999999876 5689999999763 777899999999999999998
Q ss_pred CC
Q 000524 1083 PL 1084 (1444)
Q Consensus 1083 ~~ 1084 (1444)
..
T Consensus 590 ~i 591 (614)
T KOG0927|consen 590 DI 591 (614)
T ss_pred cH
Confidence 74
No 48
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.7e-41 Score=388.14 Aligned_cols=223 Identities=29% Similarity=0.426 Sum_probs=193.8
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|++..+. .++.+|+||||+|++||++||+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 5 i~~~~l~k~~~------------~~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~~ 70 (293)
T COG1131 5 IEVRNLTKKYG------------GDKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDVV 70 (293)
T ss_pred eeecceEEEeC------------CCCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeCc
Confidence 55667766553 136799999999999999999999999999999999998764 5899999998765
Q ss_pred c--ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 927 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 927 ~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
. ...++.+||++|++.+++.+||+|+|.|.+.++.+.. +..+++++++++.++|.+..++. +++||+|||
T Consensus 71 ~~~~~~~~~igy~~~~~~~~~~lT~~e~l~~~~~l~~~~~---~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~k 142 (293)
T COG1131 71 KEPAKVRRRIGYVPQEPSLYPELTVRENLEFFARLYGLSK---EEAEERIEELLELFGLEDKANKK-----VRTLSGGMK 142 (293)
T ss_pred cCHHHHHhheEEEccCCCCCccccHHHHHHHHHHHhCCCh---hHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHH
Confidence 4 3567789999999999999999999999999987543 44556799999999999855554 468999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCC-CEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTG-RTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g-~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
||++||+||+++|++|||||||+|||+.++..+++.|++++++| +||++++|+++ ++...||+|++|++ |++++.|+
T Consensus 143 qrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~ 220 (293)
T COG1131 143 QRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGT 220 (293)
T ss_pred HHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCC
Confidence 99999999999999999999999999999999999999999887 89999999997 78889999999985 89999997
Q ss_pred CCcchhHHHHHHHh
Q 000524 1084 LGRHSCQLISYFEA 1097 (1444)
Q Consensus 1084 ~~~~~~~~~~yF~~ 1097 (1444)
. .++...+..
T Consensus 221 ~----~~l~~~~~~ 230 (293)
T COG1131 221 P----EELKEKFGG 230 (293)
T ss_pred H----HHHHHhhcc
Confidence 6 345555543
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-41 Score=366.69 Aligned_cols=224 Identities=27% Similarity=0.354 Sum_probs=194.2
Q ss_pred ccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc------cceEEEEcCCCC
Q 000524 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDN 236 (1444)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1444)
...++|+|||+.|++|++.+|+|+||||||||++++.++-.|+ +|+|.++|+++..+.. |+.+|+++|+..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 4467999999999999999999999999999999999999998 9999999988876543 478999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1444)
++...||.||++|+.+..+... .+.+.++.++|+.+||++.+|..
T Consensus 94 LLssrTV~~NvA~PLeiag~~k----------------------------------~ei~~RV~elLelVgL~dk~~~y- 138 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVPK----------------------------------AEIKQRVAELLELVGLSDKADRY- 138 (339)
T ss_pred ccccchHHhhhhhhHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhccC-
Confidence 9999999999999988765321 12345788899999999988755
Q ss_pred cCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEE
Q 000524 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1444)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1444)
+.+|||||||||+|||||+.+|+||++|||||+|||.|+..|.+.|+++.++.+ .+|+.++|-++-+-++||+|.
T Consensus 139 ----P~qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lg-lTIvlITHEm~Vvk~ic~rVa 213 (339)
T COG1135 139 ----PAQLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELG-LTIVLITHEMEVVKRICDRVA 213 (339)
T ss_pred ----chhcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcC-CEEEEEechHHHHHHHhhhhe
Confidence 457999999999999999999999999999999999999999999999987654 555558888999999999999
Q ss_pred EEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhhc
Q 000524 397 LLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEVT 437 (1444)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v~ 437 (1444)
+|++|+++++|+..++ |..|.+.-...|+.+..
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETL 246 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhc
Confidence 9999999999999887 44566555556665544
No 50
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=363.82 Aligned_cols=218 Identities=23% Similarity=0.318 Sum_probs=190.9
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.+++++..+... ..+...+|+|||++|++||++||+|+||||||||++++.+...+ .+|+|.+||.++.
T Consensus 2 I~l~~vsK~~~~~--------~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~P--tsG~v~v~G~di~ 71 (339)
T COG1135 2 IELENVSKTFGQT--------GTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERP--TSGSVFVDGQDLT 71 (339)
T ss_pred eEEEeeeeeeccC--------CCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCC--CCceEEEcCEecc
Confidence 5677776554321 11235799999999999999999999999999999999997664 5899999997654
Q ss_pred c------ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000524 927 Q------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 927 ~------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1000 (1444)
. ...|+.+|+++|+..++...||+||+.|...+.. .++++++++|.++|+.+||.+..+.. +.+||
T Consensus 72 ~l~~~~Lr~~R~~IGMIFQhFnLLssrTV~~NvA~PLeiag---~~k~ei~~RV~elLelVgL~dk~~~y-----P~qLS 143 (339)
T COG1135 72 ALSEAELRQLRQKIGMIFQHFNLLSSRTVFENVAFPLELAG---VPKAEIKQRVAELLELVGLSDKADRY-----PAQLS 143 (339)
T ss_pred cCChHHHHHHHhhccEEeccccccccchHHhhhhhhHhhcC---CCHHHHHHHHHHHHHHcCChhhhccC-----chhcC
Confidence 3 2467889999999999999999999999877653 56888899999999999999998887 46899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEE
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1079 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~ 1079 (1444)
|||||||+|||||+.+|+||++|||||.|||++...|.+.|+++.++ |.||++++|++. -+-+.|||+.+|++ |+++
T Consensus 144 GGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~-Vvk~ic~rVavm~~-G~lv 221 (339)
T COG1135 144 GGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEME-VVKRICDRVAVLDQ-GRLV 221 (339)
T ss_pred cchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHH-HHHHHhhhheEeeC-CEEE
Confidence 99999999999999999999999999999999999999999999766 999999999986 37788999999985 8999
Q ss_pred EEcCC
Q 000524 1080 YVGPL 1084 (1444)
Q Consensus 1080 y~G~~ 1084 (1444)
..|+.
T Consensus 222 E~G~v 226 (339)
T COG1135 222 EEGTV 226 (339)
T ss_pred EeccH
Confidence 99997
No 51
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.1e-40 Score=361.18 Aligned_cols=216 Identities=26% Similarity=0.433 Sum_probs=184.6
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|+++.++ .+ .+|+|||+++++|++++|+||||||||||+|+|.|... +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~------------~~-~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG------------NR-PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC------------CE-eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 478999999885 12 59999999999999999999999999999999999765 3589999999887
Q ss_pred CcccccceEEEEecCCCC---CCCCcHHHHHHHHHHhcCC--CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000524 926 KQETFARISGYCEQNDIH---SPFVTVYESLLYSAWLRLP--PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 926 ~~~~~~~~~gyv~q~~~~---~~~lTv~e~l~f~a~lr~~--~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1000 (1444)
.+..-+..+|||||...+ +| +||+|-+..+..-+.. .... +..++.++++|+.+|+.+.+|..+| .||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP-~tV~d~V~~g~~~~~g~~~~~~-~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LS 141 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFP-ITVKDVVLLGRYGKKGWFRRLN-KKDKEKVDEALERVGMEDLRDRQIG-----ELS 141 (254)
T ss_pred cccccCCeEEEcCcccccCCCCC-cCHHHHHHccCccccccccccc-HHHHHHHHHHHHHcCchhhhCCccc-----ccC
Confidence 654445679999996533 33 7999998865332221 1122 2335679999999999999999876 599
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
|||+||+-|||||+++|++|+|||||+|+|+.++..++++|+++.++|+||++++|+++ .+.+.||+++.|+ +++++
T Consensus 142 GGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~ 218 (254)
T COG1121 142 GGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIA 218 (254)
T ss_pred cHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEe
Confidence 99999999999999999999999999999999999999999999988999999999997 5999999999997 58999
Q ss_pred EcCCCc
Q 000524 1081 VGPLGR 1086 (1444)
Q Consensus 1081 ~G~~~~ 1086 (1444)
.|++.+
T Consensus 219 ~G~~~~ 224 (254)
T COG1121 219 SGPPEE 224 (254)
T ss_pred ccChhh
Confidence 999853
No 52
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.4e-35 Score=401.23 Aligned_cols=216 Identities=23% Similarity=0.350 Sum_probs=187.1
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++++|++..++. +++.+|+|+|+.+++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+
T Consensus 927 ~~L~I~nLsK~y~~-----------~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~P--tsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFEP-----------SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPP--TSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEecC-----------CCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCC--CceEEEECCEE
Confidence 46889999877731 135699999999999999999999999999999999998763 48999999988
Q ss_pred CCc--ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 925 KKQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 925 ~~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
+.. ...++.+|||+|++.+++.+||+|++.|.++++. ...++.++.++++++.+||.+..++.+ +.||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg---~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGG 1065 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKG---RSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGG 1065 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 643 2345679999999999999999999999877653 223344556899999999998888764 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
|||||+||+||+.+|+||+|||||+|||+.+++.+++.|+++. +|+|||+++|++. ++...+||+++|++ |+++..|
T Consensus 1066 qKQRLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~G 1142 (2272)
T TIGR01257 1066 MQRKLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSG 1142 (2272)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 9999999999999999999999999999999999999999995 6999999999986 67788999999996 7999999
Q ss_pred CC
Q 000524 1083 PL 1084 (1444)
Q Consensus 1083 ~~ 1084 (1444)
+.
T Consensus 1143 s~ 1144 (2272)
T TIGR01257 1143 TP 1144 (2272)
T ss_pred CH
Confidence 75
No 53
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-40 Score=349.54 Aligned_cols=210 Identities=25% Similarity=0.386 Sum_probs=185.0
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 240 (1444)
.+.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||+++.+..+ ||.+|||-|+-.+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 567999999999999999999999999999999999999998 9999999999987654 6899999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||.||+.+--.+.+... ++.+.+++++|+.+||+.. ...++.
T Consensus 90 ~Tv~eNIa~VP~L~~w~k----------------------------------~~i~~r~~ELl~lvgL~p~---~~~~Ry 132 (309)
T COG1125 90 LTVAENIATVPKLLGWDK----------------------------------ERIKKRADELLDLVGLDPS---EYADRY 132 (309)
T ss_pred ccHHHHHHhhhhhcCCCH----------------------------------HHHHHHHHHHHHHhCCCHH---HHhhcC
Confidence 999999998766654321 1234568999999999852 123467
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
++.|||||+|||.+||||+.+|++++||||+++|||-++.++.+.++++-+..+ +||+.++|+.+|++.++|+|++|++
T Consensus 133 P~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~-kTivfVTHDidEA~kLadri~vm~~ 211 (309)
T COG1125 133 PHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELG-KTIVFVTHDIDEALKLADRIAVMDA 211 (309)
T ss_pred chhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhC-CEEEEEecCHHHHHhhhceEEEecC
Confidence 789999999999999999999999999999999999999999999888766555 4555689999999999999999999
Q ss_pred CeEEEecChhhHHH
Q 000524 401 GQIVYQGPRELVLE 414 (1444)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1444)
|+++..+++++++.
T Consensus 212 G~i~Q~~~P~~il~ 225 (309)
T COG1125 212 GEIVQYDTPDEILA 225 (309)
T ss_pred CeEEEeCCHHHHHh
Confidence 99999999999864
No 54
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=5.3e-40 Score=362.43 Aligned_cols=217 Identities=28% Similarity=0.391 Sum_probs=187.5
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++.+|+++.|+ ++.+|+|+||++++|++++|+|||||||||||++|+|... +.+|+|.++|.++.
T Consensus 3 L~~~~ls~~y~-------------~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i~ 67 (258)
T COG1120 3 LEVENLSFGYG-------------GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDIA 67 (258)
T ss_pred eEEEEEEEEEC-------------CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCchh
Confidence 67889988884 4679999999999999999999999999999999999766 34899999998865
Q ss_pred c---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 927 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-EVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 927 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
. +.+++.++|+||.......+||+|.+.++..-.... ....++..+.++++|+.+++.+.++..+ ..||||
T Consensus 68 ~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSGG 142 (258)
T COG1120 68 SLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSGG 142 (258)
T ss_pred hcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccChh
Confidence 4 457789999999998888999999998764321111 1123334446999999999999999874 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEE
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1081 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~ 1081 (1444)
||||+.|||||+++|+||+||||||+||...+..+++.++++++ +|.|||+++|++. -....||++++|++ |+++..
T Consensus 143 erQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN-~A~ryad~~i~lk~-G~i~a~ 220 (258)
T COG1120 143 ERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLN-LAARYADHLILLKD-GKIVAQ 220 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEee
Confidence 99999999999999999999999999999999999999999985 4999999999997 47889999999985 899999
Q ss_pred cCCC
Q 000524 1082 GPLG 1085 (1444)
Q Consensus 1082 G~~~ 1085 (1444)
|++.
T Consensus 221 G~p~ 224 (258)
T COG1120 221 GTPE 224 (258)
T ss_pred cCcc
Confidence 9874
No 55
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1e-39 Score=346.04 Aligned_cols=230 Identities=26% Similarity=0.374 Sum_probs=198.2
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+++++++.+. +.+.|++|||++|++||+++||||||+||||||+.|.|...+ .+|+|.++|.++
T Consensus 8 ~I~vr~v~~~f-------------G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKSF-------------GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeeec-------------CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcch
Confidence 47888887765 457899999999999999999999999999999999998774 489999999886
Q ss_pred Ccc------cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCc
Q 000524 926 KQE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLPGVSG 998 (1444)
Q Consensus 926 ~~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~ 998 (1444)
.+. ..++..|+++|+-.+|..+||+||+.|.. |.....+++..++.+..-|+.+||... .+.. +..
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafpl--re~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~-----PsE 145 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPL--REHTKLPESLIRELVLMKLELVGLRGAAADLY-----PSE 145 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheeh--HhhccCCHHHHHHHHHHHHHhcCCChhhhhhC-----chh
Confidence 541 35678999999999999999999998853 333455677777788888999999987 5554 578
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 999 lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
||||++||+++||||+.+|+|||+||||+||||.++..+-++|+++.+. |.|++++|||.. +++..+|++++|.+ |+
T Consensus 146 LSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gk 223 (263)
T COG1127 146 LSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GK 223 (263)
T ss_pred hcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CE
Confidence 9999999999999999999999999999999999999999999999876 999999999997 69999999999996 89
Q ss_pred EEEEcCCCc----chhHHHHHHHhCC
Q 000524 1078 EIYVGPLGR----HSCQLISYFEAIP 1099 (1444)
Q Consensus 1078 ~~y~G~~~~----~~~~~~~yF~~~~ 1099 (1444)
++..|+..+ ...-+.+||....
T Consensus 224 v~~~Gt~~el~~sd~P~v~qf~~G~~ 249 (263)
T COG1127 224 VIAEGTPEELLASDDPWVRQFFNGIR 249 (263)
T ss_pred EEEeCCHHHHHhCCCHHHHHHhcCCC
Confidence 999999742 1135667887654
No 56
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-39 Score=352.42 Aligned_cols=204 Identities=24% Similarity=0.359 Sum_probs=180.6
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++++++++. ...+|+|||++|.+||+++|+|||||||||||++|+|..++ .+|+|.++|.+.
T Consensus 3 ~l~i~~v~~~f~-------------~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p--~~G~V~~~g~~v 67 (248)
T COG1116 3 LLEIEGVSKSFG-------------GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKP--TSGEVLLDGRPV 67 (248)
T ss_pred eEEEEeeEEEeC-------------ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCccc
Confidence 367778877764 25799999999999999999999999999999999998764 489999999987
Q ss_pred CcccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000524 926 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 1005 (1444)
Q Consensus 926 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1005 (1444)
.. ....+|||+|++.++|..||+||+.|+...+. .+++++.+++++.|+.+||.++.|.. +..|||||||
T Consensus 68 ~~--p~~~~~~vFQ~~~LlPW~Tv~~NV~l~l~~~~---~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQ 137 (248)
T COG1116 68 TG--PGPDIGYVFQEDALLPWLTVLDNVALGLELRG---KSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQ 137 (248)
T ss_pred CC--CCCCEEEEeccCcccchhhHHhhheehhhccc---cchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHH
Confidence 32 34568999999999999999999999877653 34556667899999999999999887 5689999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecC
Q 000524 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1075 (1444)
Q Consensus 1006 Rl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~g 1075 (1444)
||+|||||+.+|+||+||||.+.||+.|+..+++.|.++.++ +.|||++||+.. |...+.|||++|+.+
T Consensus 138 RVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 138 RVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 999999999999999999999999999999999999998754 899999999996 788899999999864
No 57
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5e-40 Score=376.09 Aligned_cols=217 Identities=31% Similarity=0.436 Sum_probs=193.1
Q ss_pred EeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCcc-ceEEEEcCCCCCCCCCCHHH
Q 000524 167 ILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE-RTAAYISQHDNHIGEMTVRE 245 (1444)
Q Consensus 167 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lTV~E 245 (1444)
+|+|+|+.|++||+++|+|||||||||||++|||+.+|+ +|+|.++|.++++..|+ |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999998 99999999999998875 88999999999999999999
Q ss_pred HHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccc
Q 000524 246 TLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGIS 325 (1444)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1444)
|+.|+.+.++... .+.+.+++++.+.|+|++..|.+ +++||
T Consensus 95 Niaf~Lk~~~~~k----------------------------------~ei~~rV~eva~~L~l~~lL~r~-----P~~LS 135 (338)
T COG3839 95 NIAFGLKLRGVPK----------------------------------AEIDKRVKEVAKLLGLEHLLNRK-----PLQLS 135 (338)
T ss_pred HhhhhhhhCCCch----------------------------------HHHHHHHHHHHHHcCChhHHhcC-----cccCC
Confidence 9999998765311 12345688899999999988855 45799
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEEE
Q 000524 326 GGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1444)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~ 405 (1444)
|||||||++||||+.+|++++||||.|.||...+..+...|+++-+ .-++++|.++|+..|+..++|+|.+|++|+|..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~-~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHE-RLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHH-hcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999999999999998654 445666678999999999999999999999999
Q ss_pred ecChhhHHHHHHhcCCCCCCCCChhHHHH
Q 000524 406 QGPRELVLEFFESMGFKCPKRKGVADFLQ 434 (1444)
Q Consensus 406 ~G~~~~~~~~F~~~Gf~cp~~~~~adfl~ 434 (1444)
.|++.++. ..|.+.-+|.|+-
T Consensus 215 ~g~p~ely--------~~P~n~fVA~FiG 235 (338)
T COG3839 215 VGTPLELY--------ERPANLFVAGFIG 235 (338)
T ss_pred cCChHHHh--------hCccchhhhhhcC
Confidence 99999984 4566666666653
No 58
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=2.5e-39 Score=350.42 Aligned_cols=193 Identities=29% Similarity=0.442 Sum_probs=168.1
Q ss_pred eEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc------ccc-cceEEEEecCCCCC
Q 000524 872 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ------ETF-ARISGYCEQNDIHS 944 (1444)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~------~~~-~~~~gyv~q~~~~~ 944 (1444)
..+|++||+.|++||++||||||||||||||++|.|...+ .+|.|.++|.+... ..+ ++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999998764 58999999976542 123 45799999999999
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc-ccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000524 945 PFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQ-SLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1023 (1444)
Q Consensus 945 ~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~-~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLD 1023 (1444)
|++||+||+.....+.... ...+++.++++++.+||.+..+ .. +..|||||||||+|||||+.+|+||+.|
T Consensus 96 ~~ltv~ENv~lpl~~~~~~---~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilAD 167 (226)
T COG1136 96 PDLTVLENVELPLLIAGKS---AGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILAD 167 (226)
T ss_pred CCCCHHHHHHhHHHHcCCC---hhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEee
Confidence 9999999999876554322 2255667899999999997666 44 4679999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 1024 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 1024 EPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
|||.+||+.++..|++.+++++++ |+|||++||+| ++...|||++.|++|+
T Consensus 168 EPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 168 EPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred CccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 999999999999999999999866 99999999997 5889999999999753
No 59
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.8e-39 Score=374.96 Aligned_cols=212 Identities=33% Similarity=0.469 Sum_probs=184.6
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCC--CccceEEEEcCCCCCCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF--VPERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 241 (1444)
.+.+|+|||+.+++|++++|+||||||||||||+|+|.+.|+ +|+|.++|++.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 468999999999999999999999999999999999999997 99999999887653 3357899999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
||+|||.|.+++++.... ....+++++++.+||++.+++ .+
T Consensus 94 T~~e~l~~~~~l~~~~~~----------------------------------~~~~~~~~~l~~~~L~~~~~~-----~~ 134 (293)
T COG1131 94 TVRENLEFFARLYGLSKE----------------------------------EAEERIEELLELFGLEDKANK-----KV 134 (293)
T ss_pred cHHHHHHHHHHHhCCChh----------------------------------HHHHHHHHHHHHcCCchhhCc-----ch
Confidence 999999999988753210 012357889999999984444 45
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
++||+||||||+||.||+++|+++||||||+|||+.++.++.+.|+++++. ++++|+..+|...++..+||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~-g~~tvlissH~l~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKE-GGVTILLSTHILEEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhC-CCcEEEEeCCcHHHHHHhCCEEEEEeCC
Confidence 579999999999999999999999999999999999999999999999864 4355555778889999999999999999
Q ss_pred eEEEecChhhHHHHHHh
Q 000524 402 QIVYQGPRELVLEFFES 418 (1444)
Q Consensus 402 ~iv~~G~~~~~~~~F~~ 418 (1444)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999988776543
No 60
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-40 Score=376.70 Aligned_cols=223 Identities=30% Similarity=0.426 Sum_probs=197.4
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lT 242 (1444)
...+|+|+|+.|++||+++|+|||||||||||++|||...|+ +|+|.++|++++...+ +|.+++|+|+-.+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 467999999999999999999999999999999999999998 9999999999998877 478999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+||+.|+.+.++... ..+.+.+++++|+.++|++.++. .+.
T Consensus 94 V~~NVafGLk~~~~~~---------------------------------~~~i~~rv~e~L~lV~L~~~~~R-----~p~ 135 (352)
T COG3842 94 VEENVAFGLKVRKKLK---------------------------------KAEIKARVEEALELVGLEGFADR-----KPH 135 (352)
T ss_pred HHHHhhhhhhhcCCCC---------------------------------HHHHHHHHHHHHHHcCchhhhhh-----Chh
Confidence 9999999987442111 01234568889999999987764 455
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.|||||||||++||||+.+|++||||||.|+||..-+.++..-|+++.+.. +++.|.++|+..|...++|+|++|++|+
T Consensus 136 qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~-giT~i~VTHDqeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 136 QLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQREL-GITFVYVTHDQEEALAMSDRIAVMNDGR 214 (352)
T ss_pred hhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhc-CCeEEEEECCHHHHhhhccceEEccCCc
Confidence 799999999999999999999999999999999999999999999987765 5666668999999999999999999999
Q ss_pred EEEecChhhHHHHHHhcCCCCCCCCChhHHHHhh
Q 000524 403 IVYQGPRELVLEFFESMGFKCPKRKGVADFLQEV 436 (1444)
Q Consensus 403 iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v 436 (1444)
|...|+++++ |..|...-+|||+-+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999998 4578888888888654
No 61
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=356.12 Aligned_cols=222 Identities=28% Similarity=0.449 Sum_probs=187.7
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCc---cCCCCCc-cceEEEEcCCCCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGH---DMGEFVP-ERTAAYISQHDNHIG 239 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~---~~~~~~~-~~~~~yv~Q~d~~~~ 239 (1444)
...+++|||+.|+.||+++++|||||||||||++|+|+..|+ +|.|.+||. +.+.... .|.+|||+|+..+|+
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 456899999999999999999999999999999999999998 999999999 5555333 488999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000524 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1444)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1444)
.|||.|||.|+.+++.. .|+ ..+.+.+++++|+.+.|++.++ +
T Consensus 91 HmtVa~NIAFGl~~~~~-------------------~p~-------------~~~~r~rv~elL~lvqL~~la~-----r 133 (345)
T COG1118 91 HMTVADNIAFGLKVRKE-------------------RPS-------------EAEIRARVEELLRLVQLEGLAD-----R 133 (345)
T ss_pred cchHHhhhhhccccccc-------------------CCC-------------hhhHHHHHHHHHHHhcccchhh-----c
Confidence 99999999999876521 010 0123456788899999987766 5
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
.+.+|||||||||++||||+..|++|+||||+++||...+.++-+.|+++....+ .+.+.++|+..|+++++|+|++|+
T Consensus 134 yP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~-~ttvfVTHD~eea~~ladrvvvl~ 212 (345)
T COG1118 134 YPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLG-VTTVFVTHDQEEALELADRVVVLN 212 (345)
T ss_pred CchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhC-ceEEEEeCCHHHHHhhcceEEEec
Confidence 5678999999999999999999999999999999999999999999999765444 555558999999999999999999
Q ss_pred CCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHH
Q 000524 400 DGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQ 434 (1444)
Q Consensus 400 ~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~ 434 (1444)
+|+|...||++++.+ -|...-+..|+-
T Consensus 213 ~G~Ieqvg~p~ev~~--------~P~s~fV~~f~G 239 (345)
T COG1118 213 QGRIEQVGPPDEVYD--------HPASRFVARFLG 239 (345)
T ss_pred CCeeeeeCCHHHHhc--------CCCccceecccc
Confidence 999999999999843 454444445543
No 62
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-39 Score=345.02 Aligned_cols=213 Identities=25% Similarity=0.360 Sum_probs=189.5
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++|+||+..+. .+.+++|+|++|++||+++++|||||||||+|++|.+...+ .+|+|++||.++.
T Consensus 2 I~~~nvsk~y~-------------~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiep--t~G~I~i~g~~i~ 66 (309)
T COG1125 2 IEFENVSKRYG-------------NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEP--TSGEILIDGEDIS 66 (309)
T ss_pred ceeeeeehhcC-------------CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCC--CCceEEECCeecc
Confidence 56788876653 45799999999999999999999999999999999998764 5899999999876
Q ss_pred c---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCcCCH
Q 000524 927 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP--LIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 927 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~lSg 1001 (1444)
. ...||.+|||-|+-.+||++||.||+.+.-.+. ..+++..+++++|+|+.+||++ +.+.. +..|||
T Consensus 67 ~~d~~~LRr~IGYviQqigLFPh~Tv~eNIa~VP~L~---~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSG 138 (309)
T COG1125 67 DLDPVELRRKIGYVIQQIGLFPHLTVAENIATVPKLL---GWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSG 138 (309)
T ss_pred cCCHHHHHHhhhhhhhhcccCCCccHHHHHHhhhhhc---CCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCc
Confidence 5 357889999999999999999999998765554 4567888889999999999985 66665 578999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
||+||+.+||||+++|+||+||||.+.||+.++..+++-++++.++ |+|||++||+.. |.+.+.|||.+|+. |+++-
T Consensus 139 GQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~~-G~i~Q 216 (309)
T COG1125 139 GQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMDA-GEIVQ 216 (309)
T ss_pred chhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEecC-CeEEE
Confidence 9999999999999999999999999999999999999999999766 999999999986 79999999999985 89888
Q ss_pred EcCC
Q 000524 1081 VGPL 1084 (1444)
Q Consensus 1081 ~G~~ 1084 (1444)
++++
T Consensus 217 ~~~P 220 (309)
T COG1125 217 YDTP 220 (309)
T ss_pred eCCH
Confidence 8875
No 63
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-39 Score=343.53 Aligned_cols=220 Identities=26% Similarity=0.329 Sum_probs=186.2
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|++-.++ +++++|+|||+.|++||++||+|+|||||||||++|.|... +.+|+|.++|.++
T Consensus 3 ~i~~~nl~k~yp------------~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i 68 (258)
T COG3638 3 MIEVKNLSKTYP------------GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQI 68 (258)
T ss_pred eEEEeeeeeecC------------CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccch
Confidence 477888876664 35689999999999999999999999999999999999655 4589999999764
Q ss_pred Cc------ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000524 926 KQ------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-----PEVDSETRKMFIEEVMELVELKPLIQSLVGLP 994 (1444)
Q Consensus 926 ~~------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 994 (1444)
.. +.+++.+||++|+..+.+.++|.+|+..+..-+.+ -....++.+..+-++|+.+|+.+.+-+..
T Consensus 69 ~~~~~k~lr~~r~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra--- 145 (258)
T COG3638 69 TKLKGKELRKLRRDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA--- 145 (258)
T ss_pred hccchHHHHHHHHhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh---
Confidence 32 24678899999999999999999999876322211 12233444556788999999999888774
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEe
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMK 1073 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~ 1073 (1444)
..|||||+|||+|||+|+.+|+|++.|||+++||+.+++.||+.|++++++ |.|||++.||... ..+.|||++=|+
T Consensus 146 --~~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~ 222 (258)
T COG3638 146 --STLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLK 222 (258)
T ss_pred --ccCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEec
Confidence 479999999999999999999999999999999999999999999999755 9999999999753 667899999998
Q ss_pred cCcEEEEEcCCCc
Q 000524 1074 RGGQEIYVGPLGR 1086 (1444)
Q Consensus 1074 ~gg~~~y~G~~~~ 1086 (1444)
. |+++|.||..+
T Consensus 223 ~-G~ivfDg~~~e 234 (258)
T COG3638 223 A-GRIVFDGPASE 234 (258)
T ss_pred C-CcEEEeCChhh
Confidence 5 89999999854
No 64
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.6e-40 Score=336.15 Aligned_cols=201 Identities=27% Similarity=0.388 Sum_probs=184.1
Q ss_pred eEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc--ccccceEEEEecCCCCCCCCcH
Q 000524 872 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVTV 949 (1444)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~lTv 949 (1444)
.++++||||+++.||++||+|+|||||||+|++|++...+ .+|.|++||.+... ...++.+|.++.+..++..+|+
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~ 92 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTA 92 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCCcChhhhhhH
Confidence 3489999999999999999999999999999999998764 48999999998643 3568889999988888999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000524 950 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1444)
Q Consensus 950 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgL 1029 (1444)
+|||.|.+.+. +....+.+++++++.+.++|.++.|+.+| ++|.|+||||+|||||+++|++++||||||||
T Consensus 93 rEnl~~Fa~L~---~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGL 164 (245)
T COG4555 93 RENLKYFARLN---GLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGL 164 (245)
T ss_pred HHHHHHHHHHh---hhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCc
Confidence 99999999886 34566777889999999999999999976 69999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1030 D~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|..+...+.+.++++.+.|++||+++|..+ |+..+||++++|++ |++++.|..
T Consensus 165 Di~~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~ 217 (245)
T COG4555 165 DIRTRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSI 217 (245)
T ss_pred cHHHHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCH
Confidence 999999999999999888999999999986 79889999999996 899999986
No 65
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3e-39 Score=342.56 Aligned_cols=211 Identities=25% Similarity=0.358 Sum_probs=180.3
Q ss_pred ccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc------cceEEEEcCCCC
Q 000524 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDN 236 (1444)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1444)
..+.|++|||+.|++||+++|+|||||||||||++|.|+++|+ +|+|.++|+++..... ++++|+++|+-.
T Consensus 19 G~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gA 95 (263)
T COG1127 19 GDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGA 95 (263)
T ss_pred CCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeeccc
Confidence 3467999999999999999999999999999999999999998 9999999999876543 467999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1444)
+|..+||+||+.|..+-... +|. ...+..+..-|+..||... +
T Consensus 96 LFssltV~eNVafplre~~~-------------------lp~--------------~~i~~lv~~KL~~VGL~~~----~ 138 (263)
T COG1127 96 LFSSLTVFENVAFPLREHTK-------------------LPE--------------SLIRELVLMKLELVGLRGA----A 138 (263)
T ss_pred cccccchhHhhheehHhhcc-------------------CCH--------------HHHHHHHHHHHHhcCCChh----h
Confidence 99999999999997653211 111 0122334455788899754 3
Q ss_pred cCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEE
Q 000524 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1444)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1444)
.+.++..||||+|||+++|||++.+|+++|+||||+||||.++..+.+.|+++.+..+ .|++.++|+.++++..+|+|+
T Consensus 139 ~~~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg-~T~i~VTHDl~s~~~i~Drv~ 217 (263)
T COG1127 139 ADLYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALG-LTVIMVTHDLDSLLTIADRVA 217 (263)
T ss_pred hhhCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhC-CEEEEEECChHHHHhhhceEE
Confidence 3567788999999999999999999999999999999999999999999999887655 455558899999999999999
Q ss_pred EEcCCeEEEecChhhHHH
Q 000524 397 LLSDGQIVYQGPRELVLE 414 (1444)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1444)
+|.+|+|++.|+++++.+
T Consensus 218 ~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 218 VLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEeCCEEEEeCCHHHHHh
Confidence 999999999999999864
No 66
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.4e-39 Score=359.09 Aligned_cols=211 Identities=34% Similarity=0.461 Sum_probs=180.4
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCcc---ceEEEEcCCCCCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE---RTAAYISQHDNHIGE 240 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~ 240 (1444)
++.||+|+|+.+++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.++..+ |.+|||||.....+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 357999999999999999999999999999999999999998 99999999999877653 789999999988889
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||+|.+.++..-.. + . .... ..+....++..|+.+|+.+.++..+.
T Consensus 91 ~tV~d~V~~GR~p~~-~-~----------------~~~~------------~~~D~~~v~~aL~~~~~~~la~r~~~--- 137 (258)
T COG1120 91 LTVYELVLLGRYPHL-G-L----------------FGRP------------SKEDEEIVEEALELLGLEHLADRPVD--- 137 (258)
T ss_pred cEEeehHhhcCCccc-c-c----------------ccCC------------CHhHHHHHHHHHHHhCcHHHhcCccc---
Confidence 999999998743110 0 0 0000 00112357788999999999987664
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
.|||||||||.|||||+++|++|+||||||+||...+.++++.+++++++.+ .+||.++|+...+..+||++++|++
T Consensus 138 --~LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~-~tvv~vlHDlN~A~ryad~~i~lk~ 214 (258)
T COG1120 138 --ELSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKG-LTVVMVLHDLNLAARYADHLILLKD 214 (258)
T ss_pred --ccChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEEC
Confidence 6999999999999999999999999999999999999999999999987554 4455577889999999999999999
Q ss_pred CeEEEecChhhHH
Q 000524 401 GQIVYQGPRELVL 413 (1444)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1444)
|+++.+|++++++
T Consensus 215 G~i~a~G~p~evl 227 (258)
T COG1120 215 GKIVAQGTPEEVL 227 (258)
T ss_pred CeEEeecCcchhc
Confidence 9999999998775
No 67
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.8e-39 Score=346.14 Aligned_cols=192 Identities=26% Similarity=0.377 Sum_probs=169.7
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCCHH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1444)
..+|+|+|+.|.+||+++|+|||||||||||++|+|+.+|+ +|+|.++|.++. .+...++||+|++.++|=+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 56999999999999999999999999999999999999998 999999999883 4667899999999999999999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccccc
Q 000524 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1444)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1444)
||+.|+.+..+... .+...+++.+|+.+||.+..|. .+++|
T Consensus 91 ~NV~l~l~~~~~~~----------------------------------~e~~~~a~~~L~~VgL~~~~~~-----~P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------------------------------AEARERAKELLELVGLAGFEDK-----YPHQL 131 (248)
T ss_pred hhheehhhccccch----------------------------------HhHHHHHHHHHHHcCCcchhhc-----Ccccc
Confidence 99999987654211 0122357888999999988874 45689
Q ss_pred chhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.++.+ .+|+.++|+.+|+..++|+|++|+++
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~-~TvllVTHdi~EAv~LsdRivvl~~~ 207 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETR-KTVLLVTHDVDEAVYLADRVVVLSNR 207 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhC-CEEEEEeCCHHHHHhhhCEEEEecCC
Confidence 99999999999999999999999999999999999999999988877554 55666899999999999999999984
No 68
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-38 Score=347.50 Aligned_cols=207 Identities=28% Similarity=0.433 Sum_probs=174.9
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCC---CCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHD---NHIGEMT 242 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d---~~~~~lT 242 (1444)
++|+|||+.+++|++++|+||||||||||+|+|+|.++|. +|+|.++|.+..+...+.++|||||.. .-|| +|
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~fP-~t 93 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSFP-IT 93 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCCC-cC
Confidence 4999999999999999999999999999999999999998 999999999887776678999999953 3344 79
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+|.+..+.--+. + ...... .+.+..+++.|+.+|+.+.+|..+|
T Consensus 94 V~d~V~~g~~~~~-g----~~~~~~-------------------------~~d~~~v~~aL~~Vgm~~~~~r~i~----- 138 (254)
T COG1121 94 VKDVVLLGRYGKK-G----WFRRLN-------------------------KKDKEKVDEALERVGMEDLRDRQIG----- 138 (254)
T ss_pred HHHHHHccCcccc-c----cccccc-------------------------HHHHHHHHHHHHHcCchhhhCCccc-----
Confidence 9999998732111 0 000000 1113457889999999999998887
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.|||||+|||-|||||+++|++|+|||||+|+|+.++..|++.|+++.+. +.+|+.++|+...+.+.||+|+.|+ ++
T Consensus 139 ~LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e--g~tIl~vtHDL~~v~~~~D~vi~Ln-~~ 215 (254)
T COG1121 139 ELSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE--GKTVLMVTHDLGLVMAYFDRVICLN-RH 215 (254)
T ss_pred ccCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC--CCEEEEEeCCcHHhHhhCCEEEEEc-Ce
Confidence 49999999999999999999999999999999999999999999999764 5556668999999999999999995 57
Q ss_pred EEEecChhhHHH
Q 000524 403 IVYQGPRELVLE 414 (1444)
Q Consensus 403 iv~~G~~~~~~~ 414 (1444)
+++.|+++++.+
T Consensus 216 ~~~~G~~~~~~~ 227 (254)
T COG1121 216 LIASGPPEEVLT 227 (254)
T ss_pred eEeccChhhccC
Confidence 889999988753
No 69
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.7e-39 Score=329.21 Aligned_cols=207 Identities=31% Similarity=0.368 Sum_probs=183.0
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC--ccceEEEEcCCCCCCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 241 (1444)
..++++||||.++.||+++|+|||||||||+|++|++++.|+ +|+|+++|.+..+.. .++.+|.++.+..++..|
T Consensus 14 ~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~Rl 90 (245)
T COG4555 14 KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARL 90 (245)
T ss_pred HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhh
Confidence 345899999999999999999999999999999999999998 999999999875432 368899999888899999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
|++|||.|.+++.+.. + .+.+.+++.+.+.|+|.+|.|+.+|
T Consensus 91 T~rEnl~~Fa~L~~l~----------~------------------------~~~kari~~l~k~l~l~~~~~rRv~---- 132 (245)
T COG4555 91 TARENLKYFARLNGLS----------R------------------------KEIKARIAELSKRLQLLEYLDRRVG---- 132 (245)
T ss_pred hHHHHHHHHHHHhhhh----------h------------------------hHHHHHHHHHHHHhChHHHHHHHHh----
Confidence 9999999998876431 1 1234567889999999999999998
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
++|-|+||||+|||||+.+|++++|||||||||..+...+.+.++++.. .+.+|+..+|..+|+..+||+|++|.+|
T Consensus 133 -~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~--egr~viFSSH~m~EvealCDrvivlh~G 209 (245)
T COG4555 133 -EFSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN--EGRAVIFSSHIMQEVEALCDRVIVLHKG 209 (245)
T ss_pred -hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc--CCcEEEEecccHHHHHHhhheEEEEecC
Confidence 5999999999999999999999999999999999999999999998743 3556666789999999999999999999
Q ss_pred eEEEecChhhHHH
Q 000524 402 QIVYQGPRELVLE 414 (1444)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1444)
++|+.|+.+++..
T Consensus 210 evv~~gs~~~l~~ 222 (245)
T COG4555 210 EVVLEGSIEALDA 222 (245)
T ss_pred cEEEcCCHHHHHH
Confidence 9999999987754
No 70
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=348.12 Aligned_cols=205 Identities=28% Similarity=0.442 Sum_probs=185.3
Q ss_pred ceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCc---cCCc-ccccceEEEEecCCCCCCC
Q 000524 871 KLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGY---PKKQ-ETFARISGYCEQNDIHSPF 946 (1444)
Q Consensus 871 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~---~~~~-~~~~~~~gyv~q~~~~~~~ 946 (1444)
...+++|||+.|+.||++||+|||||||||||++|||..++ ..|.|.+||. +.++ ....|.+|||+|+..+|++
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p--~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~H 91 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETP--DAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPH 91 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCC--CCceEEECCEeccchhccchhhcceeEEEechhhccc
Confidence 45689999999999999999999999999999999998774 4899999998 5444 3346789999999999999
Q ss_pred CcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000524 947 VTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1026 (1444)
Q Consensus 947 lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPT 1026 (1444)
|||.+|+.|+.+++ ...++....+.+|+++|+.+.|++..+.. +..||||||||+++||||+..|++|+||||.
T Consensus 92 mtVa~NIAFGl~~~-~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 92 MTVADNIAFGLKVR-KERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred chHHhhhhhccccc-ccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 99999999998877 33455667788899999999999998887 5689999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCC
Q 000524 1027 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1085 (1444)
Q Consensus 1027 sgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~ 1085 (1444)
++||+.-+..+.+.|+++.++ |.|+|++||++. |+++.+|||++|++ |++.-.||..
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 999999999999999999876 999999999996 89999999999996 7999999873
No 71
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.9e-38 Score=323.50 Aligned_cols=213 Identities=25% Similarity=0.333 Sum_probs=183.6
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.|+||+..|.. ...+|+||||+|++||++-|+||||||||||||+|.+... +..|+|.++|+++.
T Consensus 2 I~f~~V~k~Y~~------------g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~ 67 (223)
T COG2884 2 IRFENVSKAYPG------------GREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLS 67 (223)
T ss_pred eeehhhhhhcCC------------CchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecc
Confidence 568888766642 2569999999999999999999999999999999999765 34899999999864
Q ss_pred cc------cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000524 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 927 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1000 (1444)
.. ..+|.+|+|+||..+.+..||+||+.|...... .+..+.+++|.++|+.+||.+.++.+ +..||
T Consensus 68 ~l~~~~iP~LRR~IGvVFQD~rLL~~~tvyeNVA~pL~v~G---~~~~~i~~rV~~~L~~VgL~~k~~~l-----P~~LS 139 (223)
T COG2884 68 RLKGREIPFLRRQIGVVFQDFRLLPDRTVYENVALPLRVIG---KPPREIRRRVSEVLDLVGLKHKARAL-----PSQLS 139 (223)
T ss_pred cccccccchhhheeeeEeeeccccccchHhhhhhhhhhccC---CCHHHHHHHHHHHHHHhccchhhhcC-----ccccC
Confidence 31 257899999999999999999999999876653 34556677899999999999998887 46899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhc-ceEEEEecCcEEE
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAF-DELFLMKRGGQEI 1079 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~f-D~v~ll~~gg~~~ 1079 (1444)
|||+||++||||++.+|++|+.||||.+||+..+..||+++.++.+.|.|||+.||+- ++.+.. -|++.|.+ |+++
T Consensus 140 GGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~--~lv~~~~~rvl~l~~-Grl~ 216 (223)
T COG2884 140 GGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDL--ELVNRMRHRVLALED-GRLV 216 (223)
T ss_pred chHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccH--HHHHhccCcEEEEeC-CEEE
Confidence 9999999999999999999999999999999999999999999998899999999995 556554 57888885 7887
Q ss_pred EEcCC
Q 000524 1080 YVGPL 1084 (1444)
Q Consensus 1080 y~G~~ 1084 (1444)
.....
T Consensus 217 ~d~~~ 221 (223)
T COG2884 217 RDESR 221 (223)
T ss_pred ecccc
Confidence 76543
No 72
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-38 Score=336.26 Aligned_cols=217 Identities=25% Similarity=0.358 Sum_probs=181.2
Q ss_pred ccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc------cceEEEEcCCCC
Q 000524 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDN 236 (1444)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~ 236 (1444)
..+++|+|||+.|++||+++|+|||||||||||++|.|..+|+ +|+|.+||.++..... ++.+||++|+..
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~n 91 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFN 91 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCC
Confidence 3467999999999999999999999999999999999999998 9999999988765532 468999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1444)
+.+.+||.+|+..+..-+. +.+.. -.+..+.. .+..+-+.|+.+|+.+.+.++.
T Consensus 92 Lv~r~sv~~NVl~grl~~~--s~~~s---------lfglfsk~---------------dk~~Al~aLervgi~~~A~qra 145 (258)
T COG3638 92 LVPRLSVLENVLLGRLGYT--STWRS---------LFGLFSKE---------------DKAQALDALERVGILDKAYQRA 145 (258)
T ss_pred cccccHHHHHHHhhhcccc--hHHHH---------HhCCCCHH---------------HHHHHHHHHHHcCcHHHHHHHh
Confidence 9999999999998753221 11111 11111111 1223456789999999988877
Q ss_pred cCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEE
Q 000524 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1444)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1444)
+ .|||||+|||+|||||+.+|+++|-|||+++||+.++.++++.|++++...+.|+|+.+ |..+-+.++||||+
T Consensus 146 ~-----~LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nL-H~vdlA~~Y~~Rii 219 (258)
T COG3638 146 S-----TLSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNL-HQVDLAKKYADRII 219 (258)
T ss_pred c-----cCCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEe-chHHHHHHHHhhhe
Confidence 6 59999999999999999999999999999999999999999999999987777777755 55778899999999
Q ss_pred EEcCCeEEEecChhhHHH
Q 000524 397 LLSDGQIVYQGPRELVLE 414 (1444)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1444)
-|++|+|+|.||++++-+
T Consensus 220 gl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 220 GLKAGRIVFDGPASELTD 237 (258)
T ss_pred EecCCcEEEeCChhhhhH
Confidence 999999999999988754
No 73
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=330.99 Aligned_cols=222 Identities=25% Similarity=0.396 Sum_probs=179.0
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCeecEEEECCccCCCC-----CccceEEEEcCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDN 236 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~ 236 (1444)
++++|+|||+.|+++++||++|||||||||||++|....+ |..+++|+|.++|+++-+. ..|+++|.|+|.|.
T Consensus 19 ~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPn 98 (253)
T COG1117 19 DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPN 98 (253)
T ss_pred chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCC
Confidence 3569999999999999999999999999999999998754 4568899999999998653 23689999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcc-ccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV-CADTM 315 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1444)
-|| +|++||+.|+.|++|... +.+.+ +++.-|+.-+|-+ ..|.+
T Consensus 99 PFp-~SIydNVayG~r~~g~~~--~~lde--------------------------------iVe~sLk~AaLWdEVKDrL 143 (253)
T COG1117 99 PFP-MSIYDNVAYGLRLHGIKD--KELDE--------------------------------IVESSLKKAALWDEVKDRL 143 (253)
T ss_pred CCC-chHHHHHHHhHHhhccch--HHHHH--------------------------------HHHHHHHHhHhHHHhHHHh
Confidence 999 999999999999887543 11111 1222222222221 11211
Q ss_pred ccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeE
Q 000524 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1444)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1444)
++...+|||||+||++|||||+-+|+|||||||||+|||.++..|-+.+.++.+ .-+|+.++|.+.++.+..|+.
T Consensus 144 --~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~---~yTIviVTHnmqQAaRvSD~t 218 (253)
T COG1117 144 --HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK---KYTIVIVTHNMQQAARVSDYT 218 (253)
T ss_pred --hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh---ccEEEEEeCCHHHHHHHhHhh
Confidence 122347999999999999999999999999999999999999999999999853 455666889999999999999
Q ss_pred EEEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHH
Q 000524 396 ILLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFL 433 (1444)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl 433 (1444)
..+..|++|++|+.+++ |..|.++...||+
T Consensus 219 aFf~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 219 AFFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 99999999999999987 4567776666665
No 74
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.8e-38 Score=341.21 Aligned_cols=197 Identities=28% Similarity=0.420 Sum_probs=167.3
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-------cceEEEEcCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDN 236 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1444)
..++|+++|+.|++||+++|+|||||||||||++|+|...|+ +|.|.++|.++..... ++.+|||+|+..
T Consensus 17 ~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~n 93 (226)
T COG1136 17 KVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFN 93 (226)
T ss_pred ceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCC
Confidence 368999999999999999999999999999999999999998 9999999998876542 357999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1444)
++|++||+||+.+++.+.+.... +.+...+.+++.+||++..+
T Consensus 94 Ll~~ltv~ENv~lpl~~~~~~~~----------------------------------~~~~~~~~l~~~lgl~~~~~--- 136 (226)
T COG1136 94 LLPDLTVLENVELPLLIAGKSAG----------------------------------RRKRAAEELLEVLGLEDRLL--- 136 (226)
T ss_pred CCCCCCHHHHHHhHHHHcCCChh----------------------------------HHHHHHHHHHHhcCChhhhc---
Confidence 99999999999998766543210 11234577899999997655
Q ss_pred cCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEE
Q 000524 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1444)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1444)
+..+..|||||||||+|||||+.+|++++.||||.+||+.++..|++.++++++..+.|+|+ ++|+ +++...|||++
T Consensus 137 -~~~p~eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~-VTHd-~~lA~~~dr~i 213 (226)
T COG1136 137 -KKKPSELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIM-VTHD-PELAKYADRVI 213 (226)
T ss_pred -cCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEE-EcCC-HHHHHhCCEEE
Confidence 12345799999999999999999999999999999999999999999999998754445444 6665 46788999999
Q ss_pred EEcCCeE
Q 000524 397 LLSDGQI 403 (1444)
Q Consensus 397 lL~~G~i 403 (1444)
.|.+|++
T Consensus 214 ~l~dG~~ 220 (226)
T COG1136 214 ELKDGKI 220 (226)
T ss_pred EEeCCee
Confidence 9999984
No 75
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.2e-37 Score=363.32 Aligned_cols=214 Identities=28% Similarity=0.409 Sum_probs=187.3
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|++..+. ++.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~~-------------~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p--~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRYG-------------DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHP--DAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEEC-------------CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEec
Confidence 588899987763 24699999999999999999999999999999999998653 489999999986
Q ss_pred Cc--ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000524 926 KQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 1003 (1444)
Q Consensus 926 ~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1003 (1444)
.. ...++.+|||+|++.+++.+||+|++.|.+.++. .+..+..+.++++++.++|.+..++.+ +.|||||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 143 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFG---LSAAAARALVPPLLEFAKLENKADAKV-----GELSGGM 143 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHH
Confidence 43 2346789999999999999999999998766542 233344456889999999998888875 5799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1004 rkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
|||++||+||+.+|++|||||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 144 ~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~ 221 (306)
T PRK13537 144 KRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGA 221 (306)
T ss_pred HHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECC
Confidence 99999999999999999999999999999999999999999877999999999986 68889999999986 79999998
Q ss_pred C
Q 000524 1084 L 1084 (1444)
Q Consensus 1084 ~ 1084 (1444)
.
T Consensus 222 ~ 222 (306)
T PRK13537 222 P 222 (306)
T ss_pred H
Confidence 6
No 76
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-38 Score=328.21 Aligned_cols=217 Identities=23% Similarity=0.314 Sum_probs=187.4
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCC---CCceEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRK---TGGYITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~---~~~~~~G~i~i~g 922 (1444)
.++.+|++..|. .+++|+|||+.|+++++||++|||||||||||++|.+.. .+-.++|+|.++|
T Consensus 7 ~~~~~~l~~yYg-------------~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g 73 (253)
T COG1117 7 AIEVRDLNLYYG-------------DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDG 73 (253)
T ss_pred eeEecceeEEEC-------------chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECC
Confidence 477888887774 457999999999999999999999999999999998743 3346899999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLPGV 996 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~ 996 (1444)
.++-. ..+|+.+|.|+|.+.-|| +|++||+.|+.++..-.+ ++.++.|++.|+...|++- .|.+ ... .
T Consensus 74 ~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~---~~ldeiVe~sLk~AaLWdEVKDrL-~~s-a 147 (253)
T COG1117 74 KNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKD---KELDEIVESSLKKAALWDEVKDRL-HKS-A 147 (253)
T ss_pred eeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccch---HHHHHHHHHHHHHhHhHHHhHHHh-hCC-c
Confidence 87543 246889999999999999 999999999987765433 6677889999999999874 4444 222 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
.+|||||+|||||||+|+-+|+||+||||||+|||.+...|-+++.++. +.-|||++||.+. ...+..|+..++.. |
T Consensus 148 ~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G 224 (253)
T COG1117 148 LGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-G 224 (253)
T ss_pred cCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-c
Confidence 5799999999999999999999999999999999999999999999997 4689999999986 57788899999986 7
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
++|.+|++
T Consensus 225 ~LvE~g~T 232 (253)
T COG1117 225 ELVEFGPT 232 (253)
T ss_pred EEEEEcCH
Confidence 99999997
No 77
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-38 Score=360.57 Aligned_cols=214 Identities=27% Similarity=0.397 Sum_probs=191.9
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|++.++. +..+|+|||++|++||.++|+|||||||||||++|||... +.+|+|.|+|.+.
T Consensus 3 ~i~l~~v~K~yg-------------~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~v 67 (338)
T COG3839 3 ELELKNVRKSFG-------------SFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDV 67 (338)
T ss_pred EEEEeeeEEEcC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEC
Confidence 467788876663 2229999999999999999999999999999999999876 4589999999987
Q ss_pred Cc-ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 926 KQ-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 926 ~~-~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
+. ...+|.+++|+|+..++|++||+||+.|+.+++. .++++.+++|.++.+.++|++..|.+ ++.||||||
T Consensus 68 t~l~P~~R~iamVFQ~yALyPhmtV~~Niaf~Lk~~~---~~k~ei~~rV~eva~~L~l~~lL~r~-----P~~LSGGQr 139 (338)
T COG3839 68 TDLPPEKRGIAMVFQNYALYPHMTVYENIAFGLKLRG---VPKAEIDKRVKEVAKLLGLEHLLNRK-----PLQLSGGQR 139 (338)
T ss_pred CCCChhHCCEEEEeCCccccCCCcHHHHhhhhhhhCC---CchHHHHHHHHHHHHHcCChhHHhcC-----cccCChhhH
Confidence 76 3456889999999999999999999999987763 45677788899999999999999988 468999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
|||+|||||+++|++++||||.|+||+..+..+...|+++.++ |.|+|.+||+.. |.+.++||+.+|+ .|++.-.|.
T Consensus 140 QRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~ 217 (338)
T COG3839 140 QRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGT 217 (338)
T ss_pred HHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCC
Confidence 9999999999999999999999999999999999999998765 899999999984 8999999999999 589999998
Q ss_pred C
Q 000524 1084 L 1084 (1444)
Q Consensus 1084 ~ 1084 (1444)
+
T Consensus 218 p 218 (338)
T COG3839 218 P 218 (338)
T ss_pred h
Confidence 6
No 78
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3.1e-37 Score=362.44 Aligned_cols=206 Identities=23% Similarity=0.326 Sum_probs=177.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc------cceEEEEcCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1444)
+++|+|+|+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++....+ ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999998 9999999999876532 45799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+.+||+||+.|+.+..+... .+...++.++++.+||++..|..+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~v~e~l~~vgL~~~~~~~~-- 138 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTPK----------------------------------DEIKRKVTELLALVGLGDKHDSYP-- 138 (343)
T ss_pred ccCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998765432110 011234677899999998777554
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
+.|||||||||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+..+. +|+.++|..+.+.++||+|++|
T Consensus 139 ---~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~-tiiliTH~~~~v~~~~d~v~vl 214 (343)
T TIGR02314 139 ---SNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGL-TILLITHEMDVVKRICDCVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCC-EEEEEeCCHHHHHHhCCEEEEE
Confidence 479999999999999999999999999999999999999999999998764444 4555788899999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|++++.|+.+++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998874
No 79
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9e-38 Score=376.41 Aligned_cols=213 Identities=23% Similarity=0.438 Sum_probs=176.9
Q ss_pred CCccccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCC
Q 000524 159 PSRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHD 235 (1444)
Q Consensus 159 ~~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d 235 (1444)
|.| ++.+||+|+|++|+|||.+||+|||||||||+.++|...++|+ +|+|.+||+|+.++++ ++.+|+|.|+|
T Consensus 476 P~R-p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEP 551 (716)
T KOG0058|consen 476 PTR-PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEP 551 (716)
T ss_pred CCC-CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccc
Confidence 444 4577999999999999999999999999999999999999998 9999999999998876 58999999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccc
Q 000524 236 NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTM 315 (1444)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1444)
.+|.. ||+|||.|+.. . .+.|+.+.|+.... . .|. +.++++.+||.
T Consensus 552 vLFs~-sI~eNI~YG~~--~-----------------------~t~e~i~~AAk~AN-a----h~F---I~~~p~gY~T~ 597 (716)
T KOG0058|consen 552 VLFSG-SIRENIAYGLD--N-----------------------ATDEEIEAAAKMAN-A----HEF---ITNFPDGYNTV 597 (716)
T ss_pred eeecc-cHHHHHhcCCC--C-----------------------CCHHHHHHHHHHhC-h----HHH---HHhCccccccc
Confidence 98875 99999999753 1 11111222221111 1 122 34689999999
Q ss_pred ccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeE
Q 000524 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1444)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1444)
||+++. .||||||||++|||||+++|+||||||.||+||+++...+.+.|.+..+ ++|+++ |.|. -.+.+.+|+|
T Consensus 598 VGEkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlv-IAHR-LSTV~~Ad~I 672 (716)
T KOG0058|consen 598 VGEKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLV-IAHR-LSTVRHADQI 672 (716)
T ss_pred cCCccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEE-Eehh-hhHhhhccEE
Confidence 998876 6999999999999999999999999999999999999999999988653 355555 5554 4578889999
Q ss_pred EEEcCCeEEEecChhhHHH
Q 000524 396 ILLSDGQIVYQGPRELVLE 414 (1444)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1444)
+++++|++++.|+++|+++
T Consensus 673 vvi~~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 673 VVIDKGRVVEMGTHDELLS 691 (716)
T ss_pred EEEcCCeEEecccHHHHhh
Confidence 9999999999999999975
No 80
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=5.5e-37 Score=360.35 Aligned_cols=217 Identities=23% Similarity=0.293 Sum_probs=186.3
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++++|+++.++.. ...+.+|+|||+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 2 I~~~~lsk~y~~~---------~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p--~~G~I~i~G~~i~ 70 (343)
T TIGR02314 2 IKLSNITKVFHQG---------TKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERP--TSGSVIVDGQDLT 70 (343)
T ss_pred EEEEEEEEEECCC---------CcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 5788888777421 0124699999999999999999999999999999999998763 4899999998764
Q ss_pred cc------cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000524 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 927 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1000 (1444)
.. ..++.+||++|+..+++..||+||+.|....+ ..+.++.++++.++++.+||.+..|.. +..||
T Consensus 71 ~~~~~~l~~~r~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~---~~~~~~~~~~v~e~l~~vgL~~~~~~~-----~~~LS 142 (343)
T TIGR02314 71 TLSNSELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELD---NTPKDEIKRKVTELLALVGLGDKHDSY-----PSNLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEECCccccccCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhCC
Confidence 31 23567999999999999999999999876543 134455566789999999999888876 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEE
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1079 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~ 1079 (1444)
||||||++|||||+.+|++|+||||||+||+.++..+++.|+++.++ |.|||+++|+++ .+.+.||++++|++ |+++
T Consensus 143 gGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv 220 (343)
T TIGR02314 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELI 220 (343)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999865 999999999986 57788999999985 8999
Q ss_pred EEcCC
Q 000524 1080 YVGPL 1084 (1444)
Q Consensus 1080 y~G~~ 1084 (1444)
..|+.
T Consensus 221 ~~g~~ 225 (343)
T TIGR02314 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99985
No 81
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-37 Score=358.51 Aligned_cols=215 Identities=27% Similarity=0.385 Sum_probs=192.3
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|++-++. ...+|+|||++|++||+++|+|||||||||||++|||...+ .+|+|.++|.++
T Consensus 5 ~l~i~~v~k~yg-------------~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p--~~G~I~l~G~~i 69 (352)
T COG3842 5 ALEIRNVSKSFG-------------DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQP--SSGEILLDGEDI 69 (352)
T ss_pred eEEEEeeeeecC-------------CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEC
Confidence 578888876653 46799999999999999999999999999999999998764 489999999987
Q ss_pred Ccc-cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 926 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 926 ~~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
... ..+|.+|+|+|+-.+||+|||+||+.|+.+++ ....+++.+++|+++++.++|.+..+.. +..|||||+
T Consensus 70 ~~lpp~kR~ig~VFQ~YALFPHltV~~NVafGLk~~--~~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQq 142 (352)
T COG3842 70 TDVPPEKRPIGMVFQSYALFPHMTVEENVAFGLKVR--KKLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQ 142 (352)
T ss_pred CCCChhhcccceeecCcccCCCCcHHHHhhhhhhhc--CCCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHH
Confidence 663 35788999999999999999999999997644 3345566788899999999999998887 468999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
|||++||||+.+|++|+||||-|+||..-+..++.-|+++.++ |.|.|++|||.. |...+.|||.+|++ |++.-.|+
T Consensus 143 QRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gt 220 (352)
T COG3842 143 QRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGT 220 (352)
T ss_pred HHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCC
Confidence 9999999999999999999999999999999999999998765 999999999986 78999999999986 89998888
Q ss_pred C
Q 000524 1084 L 1084 (1444)
Q Consensus 1084 ~ 1084 (1444)
+
T Consensus 221 P 221 (352)
T COG3842 221 P 221 (352)
T ss_pred H
Confidence 6
No 82
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-37 Score=345.63 Aligned_cols=213 Identities=24% Similarity=0.348 Sum_probs=180.6
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~ 66 (235)
T cd03261 2 ELRGLTKSFG-------------GRTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDISG 66 (235)
T ss_pred eEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccc
Confidence 5677777663 24699999999999999999999999999999999998653 48999999987543
Q ss_pred ------ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000524 928 ------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 928 ------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1001 (1444)
..+++.++|++|++.+++.+||+|++.+...... ....++..+.++++++.++|.+..++.+ ..|||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 139 (235)
T cd03261 67 LSEAELYRLRRRMGMLFQSGALFDSLTVFENVAFPLREHT--RLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSG 139 (235)
T ss_pred cChhhHHHHhcceEEEccCcccCCCCcHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCH
Confidence 1245679999999999999999999988643321 1233444566889999999988776654 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
|||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|++ |++++
T Consensus 140 G~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~ 217 (235)
T cd03261 140 GMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVA 217 (235)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999874 899999999986 57788999999986 79999
Q ss_pred EcCC
Q 000524 1081 VGPL 1084 (1444)
Q Consensus 1081 ~G~~ 1084 (1444)
.|+.
T Consensus 218 ~g~~ 221 (235)
T cd03261 218 EGTP 221 (235)
T ss_pred ecCH
Confidence 9875
No 83
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-37 Score=363.90 Aligned_cols=206 Identities=25% Similarity=0.364 Sum_probs=178.7
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.++||+|++.++|++||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 45999999999999999999999999999999999999997 9999999999876544 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
+||+.|+.+.++... .+...+++++++.+||++..+..+ +.
T Consensus 94 ~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 134 (356)
T PRK11650 94 RENMAYGLKIRGMPK----------------------------------AEIEERVAEAARILELEPLLDRKP-----RE 134 (356)
T ss_pred HHHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hh
Confidence 999999865432100 011234678899999988777554 47
Q ss_pred cchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000524 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1444)
|||||||||+|||||+.+|++|+|||||++||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~-g~tii~vTHd~~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRL-KTTSLYVTHDQVEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEeCCEE
Confidence 99999999999999999999999999999999999999999999886533 45566688888999999999999999999
Q ss_pred EEecChhhHH
Q 000524 404 VYQGPRELVL 413 (1444)
Q Consensus 404 v~~G~~~~~~ 413 (1444)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999998874
No 84
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1e-36 Score=360.66 Aligned_cols=214 Identities=25% Similarity=0.359 Sum_probs=188.3
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|++..+. .+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~ 68 (353)
T TIGR03265 4 YLSIDNIRKRFG-------------AFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDI 68 (353)
T ss_pred EEEEEEEEEEeC-------------CeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 378889887763 2468999999999999999999999999999999999865 3589999999876
Q ss_pred Cc-ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 926 KQ-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 926 ~~-~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
.. ...+|.+|||+|+..++|.+||+||+.|+...+ ..+..+.++.++++++.++|.+..+.. +..||||||
T Consensus 69 ~~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~l~L~~~~~~~-----~~~LSgGq~ 140 (353)
T TIGR03265 69 TRLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNR---GMGRAEVAERVAELLDLVGLPGSERKY-----PGQLSGGQQ 140 (353)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCCchhhCC-----hhhCCHHHH
Confidence 43 224577999999999999999999999986543 234455667899999999999988876 467999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
|||+|||||+.+|++|+|||||++||..++..+.+.|+++.++ |.|+|+++|++. ++..++|++++|++ |+++..|+
T Consensus 141 QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~ 218 (353)
T TIGR03265 141 QRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGT 218 (353)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999996 78999999999996 79999998
Q ss_pred C
Q 000524 1084 L 1084 (1444)
Q Consensus 1084 ~ 1084 (1444)
.
T Consensus 219 ~ 219 (353)
T TIGR03265 219 P 219 (353)
T ss_pred H
Confidence 6
No 85
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-36 Score=361.12 Aligned_cols=214 Identities=25% Similarity=0.358 Sum_probs=186.8
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|++..++ +.+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++.
T Consensus 4 l~i~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p--~~G~I~~~g~~i~ 69 (356)
T PRK11650 4 LKLQAVRKSYD------------GKTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERI--TSGEIWIGGRVVN 69 (356)
T ss_pred EEEEeEEEEeC------------CCCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEECC
Confidence 67888887762 124699999999999999999999999999999999998663 5899999998764
Q ss_pred cc-cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000524 927 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 1005 (1444)
Q Consensus 927 ~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1005 (1444)
.. ..++.+|||+|+..++|++||+||+.|....+ ..+..+.++.++++++.++|.+..+..+ ..|||||||
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~Q 141 (356)
T PRK11650 70 ELEPADRDIAMVFQNYALYPHMSVRENMAYGLKIR---GMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQ 141 (356)
T ss_pred CCCHHHCCEEEEeCCccccCCCCHHHHHHhHHhhc---CCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHH
Confidence 32 23477999999999999999999999986543 2344555667899999999998888764 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1006 Rl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
||+|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||++. ++.+++|++++|++ |+++..|+.
T Consensus 142 RvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~~ 219 (356)
T PRK11650 142 RVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGTP 219 (356)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999999999999999999999999998765 899999999986 78999999999985 899999986
No 86
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.9e-37 Score=361.52 Aligned_cols=206 Identities=22% Similarity=0.361 Sum_probs=179.0
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1444)
..+|+|+|+.+++||+++|+|||||||||||++|+|..+|+ +|+|.++|.++....+ ++.++||+|+..++|++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999998 9999999999876555 3789999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
+||+.|+.+.++... .+.+.+++++++.+||.+..+.. ++.
T Consensus 96 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gl~~~~~r~-----~~~ 136 (351)
T PRK11432 96 GENVGYGLKMLGVPK----------------------------------EERKQRVKEALELVDLAGFEDRY-----VDQ 136 (351)
T ss_pred HHHHHHHHhHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCC-----hhh
Confidence 999999875432110 01223567889999998776654 457
Q ss_pred cchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000524 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1444)
|||||||||+|||||+.+|++|+||||+++||+.++.++.+.|+++.+..+ ++++.++|+..++.+++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFN-ITSLYVTHDQSEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998865434 4556688899999999999999999999
Q ss_pred EEecChhhHH
Q 000524 404 VYQGPRELVL 413 (1444)
Q Consensus 404 v~~G~~~~~~ 413 (1444)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 87
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=7.4e-37 Score=361.94 Aligned_cols=207 Identities=26% Similarity=0.397 Sum_probs=179.1
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ +|.++||+|+..+||.+||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 45899999999999999999999999999999999999998 9999999998876544 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
+||+.|+.+.++... .+...+++++++.+||++..|..+ +.
T Consensus 94 ~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~L~~~~~~~~-----~~ 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMGR----------------------------------AEVAERVAELLDLVGLPGSERKYP-----GQ 134 (353)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCCchhhCCh-----hh
Confidence 999999865432110 011235678899999998877554 57
Q ss_pred cchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000524 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1444)
|||||||||+|||||+.+|+++|||||+++||..++.++.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-~~tvi~vTHd~~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRL-GVTTIMVTHDQEEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEcCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999886543 45555578888999999999999999999
Q ss_pred EEecChhhHHH
Q 000524 404 VYQGPRELVLE 414 (1444)
Q Consensus 404 v~~G~~~~~~~ 414 (1444)
++.|+++++.+
T Consensus 214 ~~~g~~~~~~~ 224 (353)
T TIGR03265 214 EQVGTPQEIYR 224 (353)
T ss_pred EEEcCHHHHHh
Confidence 99999988753
No 88
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6e-37 Score=327.29 Aligned_cols=206 Identities=27% Similarity=0.320 Sum_probs=177.2
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC----ccceEEEEcCCC--CCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV----PERTAAYISQHD--NHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d--~~~ 238 (1444)
.++|+|||+.+.+||..+|+|+||||||||.++|+|..+|+ +|+|.++|.+..... ..+.+.+|+||+ .+-
T Consensus 20 ~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLn 96 (252)
T COG1124 20 FHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLN 96 (252)
T ss_pred hhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccC
Confidence 36999999999999999999999999999999999999998 999999998776543 346789999997 578
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
|..||++.|.-+.+..+.+. ...++.++|+.+||+...- +
T Consensus 97 P~~tv~~~l~Epl~~~~~~~------------------------------------~~~~i~~~L~~VgL~~~~l----~ 136 (252)
T COG1124 97 PRRTVGRILSEPLRPHGLSK------------------------------------SQQRIAELLDQVGLPPSFL----D 136 (252)
T ss_pred cchhHHHHHhhhhccCCccH------------------------------------HHHHHHHHHHHcCCCHHHH----h
Confidence 89999999987665432211 1122567899999986433 3
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
+.+..|||||||||+|||||..+|++|++|||||+||++...+|++.|.++.+. .+.+++.++|+..-+..+||||++|
T Consensus 137 R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~-~~lt~l~IsHdl~~v~~~cdRi~Vm 215 (252)
T COG1124 137 RRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKE-RGLTYLFISHDLALVEHMCDRIAVM 215 (252)
T ss_pred cCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHh-cCceEEEEeCcHHHHHHHhhheeee
Confidence 556789999999999999999999999999999999999999999999998764 4566777999999999999999999
Q ss_pred cCCeEEEecChhhHHH
Q 000524 399 SDGQIVYQGPRELVLE 414 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1444)
++|++++.++.+++.+
T Consensus 216 ~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 216 DNGQIVEIGPTEELLS 231 (252)
T ss_pred eCCeEEEeechhhhhc
Confidence 9999999999998864
No 89
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.4e-36 Score=355.76 Aligned_cols=215 Identities=27% Similarity=0.379 Sum_probs=187.1
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..+.++|++..++ ++.+|+||||+|++||++||+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y~-------------~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSYG-------------DKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEE
Confidence 3588999988773 34699999999999999999999999999999999998764 48999999988
Q ss_pred CCc--ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 925 KKQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 925 ~~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
... ...++.+||++|+..+++.+||+|++.|.+.++. .+..+..+.++++++.++|.+..++.+ +.||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G 176 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADARV-----SDLSGG 176 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHH
Confidence 643 2345679999999999999999999987665442 223334456788999999998888775 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.+.||++++|++ |++++.|
T Consensus 177 ~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g 254 (340)
T PRK13536 177 MKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEG 254 (340)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 999999999999999999999999999999999999999999878999999999986 68889999999986 7999999
Q ss_pred CC
Q 000524 1083 PL 1084 (1444)
Q Consensus 1083 ~~ 1084 (1444)
+.
T Consensus 255 ~~ 256 (340)
T PRK13536 255 RP 256 (340)
T ss_pred CH
Confidence 86
No 90
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1e-36 Score=359.79 Aligned_cols=208 Identities=21% Similarity=0.297 Sum_probs=179.2
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-------cceEEEEcCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDN 236 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1444)
.+.+|+|+|+.|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 456999999999999999999999999999999999999997 9999999999876544 467999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1444)
+++++||+||+.|+.+..+... .+...++.++++.+||++..++.+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~vgL~~~~~~~p 127 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWPE----------------------------------QERKEKALELLKLVGLEEYEHRYP 127 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCchhhhCCh
Confidence 9999999999999865433210 011234677899999987776555
Q ss_pred cCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEE
Q 000524 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1444)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1444)
+ .|||||||||+|||||+.+|+++||||||+|||+.++.++.+.|+++.+..+ .+|+.++|+..++..++|+|+
T Consensus 128 ~-----~LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~-~Tii~vTHd~~ea~~~~drI~ 201 (363)
T TIGR01186 128 D-----ELSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQ-KTIVFITHDLDEAIRIGDRIV 201 (363)
T ss_pred h-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEE
Confidence 4 6999999999999999999999999999999999999999999998865334 455568899999999999999
Q ss_pred EEcCCeEEEecChhhHHH
Q 000524 397 LLSDGQIVYQGPRELVLE 414 (1444)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1444)
+|++|+++..|+++++..
T Consensus 202 vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 202 IMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEeCCEEEeeCCHHHHHh
Confidence 999999999999988753
No 91
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-36 Score=357.72 Aligned_cols=214 Identities=24% Similarity=0.376 Sum_probs=188.4
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|++..+. ++.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRFG-------------SNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKP--TEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEEC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCC--CceEEEECCEEC
Confidence 478899987763 24689999999999999999999999999999999998763 489999999876
Q ss_pred Ccc-cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 926 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 926 ~~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
... ..+|.+|||+|+..++|.+||+||+.|....+. .+.++.++.++++++.++|.+..+.. +..||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~---~~~~~~~~~v~~~l~~~gl~~~~~r~-----~~~LSgGq~ 142 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLG---VPKEERKQRVKEALELVDLAGFEDRY-----VDQISGGQQ 142 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcC---CCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 542 235779999999999999999999999865542 34456667899999999999888776 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
|||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|+++|+++ ++.+++|++++|++ |+++..|+
T Consensus 143 QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~ 220 (351)
T PRK11432 143 QRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGS 220 (351)
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999765 899999999996 78899999999996 79999998
Q ss_pred C
Q 000524 1084 L 1084 (1444)
Q Consensus 1084 ~ 1084 (1444)
.
T Consensus 221 ~ 221 (351)
T PRK11432 221 P 221 (351)
T ss_pred H
Confidence 6
No 92
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2e-36 Score=358.54 Aligned_cols=214 Identities=24% Similarity=0.335 Sum_probs=187.6
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEE--EEEEEcCc
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYIT--GNITISGY 923 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~--G~i~i~g~ 923 (1444)
.+.++|+++.+. ...+|+|+|+++++||+++|+|||||||||||++|+|...+ .+ |+|.++|.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~ 69 (362)
T TIGR03258 5 GIRIDHLRVAYG-------------ANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADR 69 (362)
T ss_pred EEEEEEEEEEEC-------------CeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCE
Confidence 478889888773 24699999999999999999999999999999999998664 36 99999998
Q ss_pred cCCcc-cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 924 PKKQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 924 ~~~~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
+.... ..++.+|||+|+..++|.+||+||+.|....+ ..+.++.++.++++++.++|.+..++.+ ..||||
T Consensus 70 ~~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~---~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgG 141 (362)
T TIGR03258 70 DLTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQ---KMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGG 141 (362)
T ss_pred ECCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHH
Confidence 76432 23567999999999999999999999986543 2344555667999999999999888774 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC--CCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~--g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
|||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++.
T Consensus 142 q~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~ 219 (362)
T TIGR03258 142 MQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAA 219 (362)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999876 799999999986 68899999999985 89999
Q ss_pred EcCC
Q 000524 1081 VGPL 1084 (1444)
Q Consensus 1081 ~G~~ 1084 (1444)
.|+.
T Consensus 220 ~g~~ 223 (362)
T TIGR03258 220 HGEP 223 (362)
T ss_pred EcCH
Confidence 9986
No 93
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.1e-36 Score=360.73 Aligned_cols=207 Identities=23% Similarity=0.344 Sum_probs=179.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCee--cEEEECCccCCCCCc-cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVS--GRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~--G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 241 (1444)
..+|+|+|+.+++|++++|+|||||||||||++|+|..+|+ + |+|.++|+++....+ ++.++||+|+..++|.+
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 35899999999999999999999999999999999999997 8 999999998876544 46799999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
||+||+.|+.+..+... .+.+.+++++++.+||++..|..+
T Consensus 95 tv~enl~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~~gL~~~~~~~~----- 135 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMPK----------------------------------ADIAERVADALKLVGLGDAAAHLP----- 135 (362)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHhcCCCchhhCCh-----
Confidence 99999999875432110 011234678899999998877655
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
+.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++++++.++|+..++..++|+|++|++|
T Consensus 136 ~~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G 215 (362)
T TIGR03258 136 AQLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDG 215 (362)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 47999999999999999999999999999999999999999999998875432456666889999999999999999999
Q ss_pred eEEEecChhhHH
Q 000524 402 QIVYQGPRELVL 413 (1444)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1444)
+++..|+++++.
T Consensus 216 ~i~~~g~~~~~~ 227 (362)
T TIGR03258 216 RLAAHGEPQALY 227 (362)
T ss_pred EEEEEcCHHHHH
Confidence 999999999884
No 94
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-36 Score=336.86 Aligned_cols=210 Identities=28% Similarity=0.403 Sum_probs=176.8
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~ 66 (213)
T cd03259 2 ELKGLSKTYG-------------SVRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTG 66 (213)
T ss_pred eeeeeEEEeC-------------CeeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCc
Confidence 4677776663 2469999999999999999999999999999999999765 358999999987643
Q ss_pred c-cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000524 928 E-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 1006 (1444)
Q Consensus 928 ~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkR 1006 (1444)
. ..++.++|++|++.+++.+|++|++.+...... ...+..++.++++++.++|.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qr 138 (213)
T cd03259 67 VPPERRNIGMVFQDYALFPHLTVAENIAFGLKLRG---VPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQR 138 (213)
T ss_pred CchhhccEEEEcCchhhccCCcHHHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHH
Confidence 2 234578999999988889999999987654321 223344456889999999988777664 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1007 l~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 139 l~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 139 VALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999764 899999999986 57788999999986 7887654
No 95
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.7e-36 Score=352.05 Aligned_cols=206 Identities=26% Similarity=0.382 Sum_probs=177.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1444)
+.+|+|||+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+|||+|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 45999999999999999999999999999999999999998 999999999876432 2467999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+||+.|.++..+... .+...+++.+++.+||.+.+++.++
T Consensus 97 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 137 (306)
T PRK13537 97 VRENLLVFGRYFGLSA----------------------------------AAARALVPPLLEFAKLENKADAKVG----- 137 (306)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchHhcCchh-----
Confidence 9999998665443110 0012245678899999988887765
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
+|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. . +++|+.++|..+++.++||+|++|++|+
T Consensus 138 ~LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~till~sH~l~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 138 ELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVIEEGR 215 (306)
T ss_pred hCCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999854 3 4556667888999999999999999999
Q ss_pred EEEecChhhHHH
Q 000524 403 IVYQGPRELVLE 414 (1444)
Q Consensus 403 iv~~G~~~~~~~ 414 (1444)
+++.|+.+++..
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999998754
No 96
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.5e-36 Score=360.84 Aligned_cols=206 Identities=27% Similarity=0.367 Sum_probs=178.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1444)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.++|.+||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999997 9999999999876544 4779999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
+||+.|+.+.++... .+.+..++++++.+||++..+..+ ..
T Consensus 104 ~eNi~~~l~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~p-----~~ 144 (375)
T PRK09452 104 FENVAFGLRMQKTPA----------------------------------AEITPRVMEALRMVQLEEFAQRKP-----HQ 144 (375)
T ss_pred HHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 999999865332110 011234677899999998777554 57
Q ss_pred cchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000524 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1444)
|||||||||+|||||+.+|++||||||+++||..++..+.+.|+++.+.. ++++|.++|+..++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tiI~vTHd~~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKL-GITFVFVTHDQEEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987644 45556688999999999999999999999
Q ss_pred EEecChhhHH
Q 000524 404 VYQGPRELVL 413 (1444)
Q Consensus 404 v~~G~~~~~~ 413 (1444)
+..|+++++.
T Consensus 224 ~~~g~~~~i~ 233 (375)
T PRK09452 224 EQDGTPREIY 233 (375)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 97
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.8e-36 Score=353.93 Aligned_cols=202 Identities=27% Similarity=0.375 Sum_probs=177.1
Q ss_pred ceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc--ccccceEEEEecCCCCCCCCc
Q 000524 871 KLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ--ETFARISGYCEQNDIHSPFVT 948 (1444)
Q Consensus 871 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~q~~~~~~~lT 948 (1444)
++.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRP--TSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 35699999999999999999999999999999999998653 48999999987643 234567999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000524 949 VYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1444)
Q Consensus 949 v~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsg 1028 (1444)
|+|++.+.+.++. ......++.++++++.++|.+..++.+ +.||||||||++||+||+.+|++|+|||||+|
T Consensus 83 v~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 154 (302)
T TIGR01188 83 GRENLEMMGRLYG---LPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTG 154 (302)
T ss_pred HHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 9999998766542 223344556899999999998877764 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1029 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1029 LD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
||+.++..+++.|++++++|+|||+++|++. ++.+.||++++|++ |++++.|+.
T Consensus 155 LD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 155 LDPRTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999999877999999999986 68889999999986 899999975
No 98
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=8e-37 Score=308.63 Aligned_cols=196 Identities=26% Similarity=0.339 Sum_probs=172.5
Q ss_pred ccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc-cccceEEEEecCCCCCCCCcHHHHHHH
Q 000524 877 GLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE-TFARISGYCEQNDIHSPFVTVYESLLY 955 (1444)
Q Consensus 877 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f 955 (1444)
..+..|.+||++||+||||||||||||+|+|...+ .+|.|+|||.+.... ...|-++.++|+..+|.++||++|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 57788999999999999999999999999998764 489999999986553 356678899999999999999999977
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000524 956 SAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1035 (1444)
Q Consensus 956 ~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~ 1035 (1444)
+.. |.-.-.++.++.++.++..+||..+.+.+. ..||||||||+++||+|+++-+||+||||.|.||+.-+.
T Consensus 95 Gl~---P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~ 166 (231)
T COG3840 95 GLS---PGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRA 166 (231)
T ss_pred cCC---cccccCHHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHH
Confidence 532 221123445567999999999999999884 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1036 IVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1036 ~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
++...+.+++++ +.|+++++|+|+ |.....|+++++++ |++.+.|+.
T Consensus 167 eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 167 EMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 999999999865 899999999997 89999999999996 899999986
No 99
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-36 Score=334.83 Aligned_cols=215 Identities=25% Similarity=0.353 Sum_probs=179.9
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
.++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 70 (220)
T cd03293 2 EVRNVSKTYGGG---------GGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERP--TSGEVLVDGEPVTG 70 (220)
T ss_pred eEEEEEEEcCCC---------CcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECcc
Confidence 467777666310 0114699999999999999999999999999999999998653 48999999987642
Q ss_pred ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHH
Q 000524 928 ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRL 1007 (1444)
Q Consensus 928 ~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl 1007 (1444)
.++.++|++|++.+++.+|++|++.+....+. ...+...+.++++++.++|.+..++.+ ..||||||||+
T Consensus 71 --~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl 140 (220)
T cd03293 71 --PGPDRGYVFQQDALLPWLTVLDNVALGLELQG---VPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRV 140 (220)
T ss_pred --ccCcEEEEecccccccCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHH
Confidence 35678999999988888999999988754431 223344556889999999988777663 57999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcceEEEEec-CcEEEEEcCC
Q 000524 1008 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKR-GGQEIYVGPL 1084 (1444)
Q Consensus 1008 ~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~t~Hqps~~i~~~fD~v~ll~~-gg~~~y~G~~ 1084 (1444)
+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|++. ++.+.+|++++|++ .|+++..++.
T Consensus 141 ~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 141 ALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999999999999999865 4899999999986 57788999999985 4899888765
No 100
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=3.9e-36 Score=355.78 Aligned_cols=216 Identities=24% Similarity=0.374 Sum_probs=186.0
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++.
T Consensus 3 L~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i~ 67 (353)
T PRK10851 3 IEIANIKKSFG-------------RTQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQ--TSGHIRFHGTDVS 67 (353)
T ss_pred EEEEEEEEEeC-------------CeEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 67788887763 24699999999999999999999999999999999998653 4899999998764
Q ss_pred cc-cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 927 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 927 ~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
.. ..++.+|||+|+..++|.+||+||+.|....+.. ...+.++.++.++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~r~i~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~ 142 (353)
T PRK10851 68 RLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQK 142 (353)
T ss_pred CCCHHHCCEEEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 32 2346799999999999999999999987654211 12344555667899999999998887763 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|+++|++. ++...+|++++|++ |++++.|+
T Consensus 143 QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~ 220 (353)
T PRK10851 143 QRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGT 220 (353)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999866 899999999996 68899999999986 89999998
Q ss_pred C
Q 000524 1084 L 1084 (1444)
Q Consensus 1084 ~ 1084 (1444)
.
T Consensus 221 ~ 221 (353)
T PRK10851 221 P 221 (353)
T ss_pred H
Confidence 6
No 101
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.5e-36 Score=335.38 Aligned_cols=208 Identities=24% Similarity=0.319 Sum_probs=175.5
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-----------~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 68 (216)
T TIGR00960 2 IRFEQVSKAYPG-----------GHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKP--TRGKIRFNGQDLT 68 (216)
T ss_pred eEEEEEEEEecC-----------CCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEehh
Confidence 567888877631 123599999999999999999999999999999999997653 4899999998753
Q ss_pred cc------cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000524 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 927 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1000 (1444)
.. .+++.++|++|++.+++.+||.|++.+....+. ...+..++.++++++.++|.+..++.+ ..||
T Consensus 69 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 140 (216)
T TIGR00960 69 RLRGREIPFLRRHIGMVFQDHRLLSDRTVYDNVAFPLRIIG---VPPRDANERVSAALEKVGLEGKAHALP-----MQLS 140 (216)
T ss_pred hcChhHHHHHHHhceEEecCccccccccHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 21 245678999999988899999999988755431 223344556899999999988777664 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 141 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 141 GGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 99999999999999999999999999999999999999999999777999999999986 57778999999986 44
No 102
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-36 Score=333.19 Aligned_cols=209 Identities=24% Similarity=0.412 Sum_probs=177.5
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (210)
T cd03269 2 EVENVTKRFG-------------RVTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI 66 (210)
T ss_pred EEEEEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH
Confidence 5677777653 2469999999999999999999999999999999999765 358999999987643
Q ss_pred ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHH
Q 000524 928 ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRL 1007 (1444)
Q Consensus 928 ~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl 1007 (1444)
..++.++|++|+..+++.+|++|++.+....+. .......+.++++++.+++.+..++. +..||||||||+
T Consensus 67 -~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl 137 (210)
T cd03269 67 -AARNRIGYLPEERGLYPKMKVIDQLVYLAQLKG---LKKEEARRRIDEWLERLELSEYANKR-----VEELSKGNQQKV 137 (210)
T ss_pred -HHHccEEEeccCCcCCcCCcHHHHHHHHHHHcC---CChHHHHHHHHHHHHHcCChHHHhCc-----HhhCCHHHHHHH
Confidence 345678999999988889999999988655432 22333445688999999998877665 357999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1008 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1008 ~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
+||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 138 ~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 138 QFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999998877899999999986 57788999999986 7877654
No 103
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.4e-36 Score=360.45 Aligned_cols=215 Identities=27% Similarity=0.434 Sum_probs=183.6
Q ss_pred CCceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcC
Q 000524 843 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG 922 (1444)
Q Consensus 843 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 922 (1444)
-...++|+||+|+|+..+ +..+|+|+||+|+|||.|||+||||+||||+.++|.+... +.+|+|.+||
T Consensus 462 ~~G~IeF~~VsFaYP~Rp----------~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG 529 (716)
T KOG0058|consen 462 LQGVIEFEDVSFAYPTRP----------DVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDG 529 (716)
T ss_pred ccceEEEEEeeeecCCCC----------CchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECC
Confidence 345799999999998653 4679999999999999999999999999999999997665 4589999999
Q ss_pred ccCCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH-------cCCccccccccc
Q 000524 923 YPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMEL-------VELKPLIQSLVG 992 (1444)
Q Consensus 923 ~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~-------l~L~~~~~~~vg 992 (1444)
.|+++ ..+++.+|+|.|+|.+|. -||+||+.|+.. ..+.++ ++++.++ .++.+-.||.||
T Consensus 530 ~~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~-----~~t~e~----i~~AAk~ANah~FI~~~p~gY~T~VG 599 (716)
T KOG0058|consen 530 VPISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD-----NATDEE----IEAAAKMANAHEFITNFPDGYNTVVG 599 (716)
T ss_pred eehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC-----CCCHHH----HHHHHHHhChHHHHHhCccccccccC
Confidence 99765 356789999999999985 699999999743 233332 2333322 356777899999
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEE
Q 000524 993 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1072 (1444)
Q Consensus 993 ~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll 1072 (1444)
..|. .||||||||++|||||++||+||||||+||.||++++..|+++|.++.+ ++|||+++|+.| ..+.+|+|+++
T Consensus 600 EkG~-qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi 675 (716)
T KOG0058|consen 600 EKGS-QLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVI 675 (716)
T ss_pred Cccc-cccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEE
Confidence 8764 7999999999999999999999999999999999999999999998865 699999999975 68899999999
Q ss_pred ecCcEEEEEcCC
Q 000524 1073 KRGGQEIYVGPL 1084 (1444)
Q Consensus 1073 ~~gg~~~y~G~~ 1084 (1444)
++ |+++..|.-
T Consensus 676 ~~-G~V~E~G~h 686 (716)
T KOG0058|consen 676 DK-GRVVEMGTH 686 (716)
T ss_pred cC-CeEEecccH
Confidence 86 899999963
No 104
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=5.5e-36 Score=349.99 Aligned_cols=214 Identities=28% Similarity=0.374 Sum_probs=183.3
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|+++.+. ++.+|+|||+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSYG-------------DKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEeC-------------CeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 377888887763 24699999999999999999999999999999999997653 489999999875
Q ss_pred Cc--ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000524 926 KQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 1003 (1444)
Q Consensus 926 ~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1003 (1444)
.. ...++.+||++|++.+++.+||+|++.+.+.... .+.+...+.++++++.++|.+..++.+ ..|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~ 140 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFG---MSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGM 140 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHH
Confidence 43 2245679999999998999999999987554321 223333456788999999998877764 5799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1004 rkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|+
T Consensus 141 ~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~ 218 (303)
T TIGR01288 141 KRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGR 218 (303)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 99999999999999999999999999999999999999999878999999999986 68889999999985 79999997
Q ss_pred C
Q 000524 1084 L 1084 (1444)
Q Consensus 1084 ~ 1084 (1444)
.
T Consensus 219 ~ 219 (303)
T TIGR01288 219 P 219 (303)
T ss_pred H
Confidence 5
No 105
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=6.1e-36 Score=332.75 Aligned_cols=210 Identities=26% Similarity=0.396 Sum_probs=177.6
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~v~~~g~~~~~ 66 (213)
T cd03301 2 ELENVTKRFG-------------NVTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEP--TSGRIYIGGRDVTD 66 (213)
T ss_pred EEEeeEEEEC-------------CeeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCc
Confidence 5677777663 23699999999999999999999999999999999998653 48999999987643
Q ss_pred c-cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000524 928 E-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 1006 (1444)
Q Consensus 928 ~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkR 1006 (1444)
. ..++.++|++|++.+++..|++|++.+....+. ...++.++.++++++.+++.+..+..+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 138 (213)
T cd03301 67 LPPKDRDIAMVFQNYALYPHMTVYDNIAFGLKLRK---VPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQR 138 (213)
T ss_pred CCcccceEEEEecChhhccCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHH
Confidence 2 224579999999988889999999988654331 223344556889999999988777764 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1007 l~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++++|
T Consensus 139 ~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 139 VALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999864 899999999985 57788999999986 7888775
No 106
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-36 Score=334.10 Aligned_cols=212 Identities=28% Similarity=0.373 Sum_probs=180.1
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
.++|+++.+. .+.+|+|+|+++++||++||+|+||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~~~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~ 66 (220)
T cd03265 2 EVENLVKKYG-------------DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKP--TSGRATVAGHDVVR 66 (220)
T ss_pred EEEEEEEEEC-------------CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecCc
Confidence 5677777663 24699999999999999999999999999999999998653 48999999986532
Q ss_pred --ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000524 928 --ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 1005 (1444)
Q Consensus 928 --~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1005 (1444)
...++.++|++|++.+++.+||+|++.+....+. ...++.++.++++++.++|.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 138 (220)
T cd03265 67 EPREVRRRIGIVFQDLSVDDELTGWENLYIHARLYG---VPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRR 138 (220)
T ss_pred ChHHHhhcEEEecCCccccccCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHH
Confidence 2234678999999998999999999988754432 223334456889999999988777764 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1006 Rl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 139 r~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 139 RLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred HHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 999999999999999999999999999999999999999876 899999999986 57788999999985 799888764
No 107
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=4.3e-37 Score=315.58 Aligned_cols=205 Identities=26% Similarity=0.349 Sum_probs=182.9
Q ss_pred CceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCccc----ccceEEEEecCCCCCC
Q 000524 870 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQET----FARISGYCEQNDIHSP 945 (1444)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~q~~~~~~ 945 (1444)
++++++++||+.+++||++||+|||||||||.+.++.|...+ .+|.|.+||.+++... -+.-+||+||+...|.
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIFr 92 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDITKLPMHKRARLGIGYLPQEASIFR 92 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCcccccCChHHHhhcCcccccccchHhh
Confidence 567899999999999999999999999999999999998764 4899999999876532 2345899999999999
Q ss_pred CCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000524 946 FVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1025 (1444)
Q Consensus 946 ~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEP 1025 (1444)
.+||+||++-....+.. +....+++..++++|+.+++.+++++.. ..||||||+|+.|||||+.+|+.++||||
T Consensus 93 ~LtV~dNi~~vlE~~~~-d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLDEP 166 (243)
T COG1137 93 KLTVEDNIMAVLEIREK-DLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLDEP 166 (243)
T ss_pred cCcHHHHHHHHHhhhhc-chhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEecCC
Confidence 99999999877666642 2233466677899999999999999873 46999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1026 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1026 TsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
.+|+||-+-..|+++++.+.+.|.-|++|-|.-+ |....|||.+++.+ |++...|.+
T Consensus 167 FAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p 223 (243)
T COG1137 167 FAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSP 223 (243)
T ss_pred ccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCH
Confidence 9999999999999999999999999999999997 79999999999996 899999986
No 108
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.7e-36 Score=309.23 Aligned_cols=199 Identities=27% Similarity=0.396 Sum_probs=175.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc------cceEEEEcCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1444)
..+|+|||+.|++||++.|+||||||||||||+|.+...|+ .|+|.+||+++..... +|.+|+|+||-.++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 56999999999999999999999999999999999999998 9999999999876532 58999999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+..||.||++|+.+..|... .+.+.++.++|+..||.+.++..
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~----------------------------------~~i~~rV~~~L~~VgL~~k~~~l--- 134 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPP----------------------------------REIRRRVSEVLDLVGLKHKARAL--- 134 (223)
T ss_pred ccchHhhhhhhhhhccCCCH----------------------------------HHHHHHHHHHHHHhccchhhhcC---
Confidence 99999999999988765321 12345678899999999988744
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
+..|||||||||+||||++.+|++|+-||||-.||+.++.+|++.+.++.+ -+|+|+..+|+..-+..+--+++.|
T Consensus 135 --P~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr--~GtTVl~ATHd~~lv~~~~~rvl~l 210 (223)
T COG2884 135 --PSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR--LGTTVLMATHDLELVNRMRHRVLAL 210 (223)
T ss_pred --ccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh--cCcEEEEEeccHHHHHhccCcEEEE
Confidence 457999999999999999999999999999999999999999999999864 3666777888888888888899999
Q ss_pred cCCeEEEec
Q 000524 399 SDGQIVYQG 407 (1444)
Q Consensus 399 ~~G~iv~~G 407 (1444)
++|+++...
T Consensus 211 ~~Grl~~d~ 219 (223)
T COG2884 211 EDGRLVRDE 219 (223)
T ss_pred eCCEEEecc
Confidence 999998754
No 109
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7e-36 Score=355.12 Aligned_cols=214 Identities=22% Similarity=0.327 Sum_probs=187.5
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|+++.+. .+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 14 ~L~l~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p--~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSFD-------------GKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETP--DSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEEC-------------CeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 478999988773 24699999999999999999999999999999999998763 489999999876
Q ss_pred Ccc-cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 926 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 926 ~~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
... ..+|.+|||+|+..++|.+||+||+.|+...+ ..+..+.++.++++++.++|.+..+..+ ..||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~ 150 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQ---KTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQ 150 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhc---CCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHH
Confidence 432 23577999999999999999999999986543 2334455667899999999998888764 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
|||+|||||+.+|++|+|||||+|||..++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 151 QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 228 (375)
T PRK09452 151 QRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGT 228 (375)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999999865 999999999986 78999999999985 89999998
Q ss_pred C
Q 000524 1084 L 1084 (1444)
Q Consensus 1084 ~ 1084 (1444)
.
T Consensus 229 ~ 229 (375)
T PRK09452 229 P 229 (375)
T ss_pred H
Confidence 5
No 110
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=7.3e-36 Score=335.03 Aligned_cols=221 Identities=37% Similarity=0.610 Sum_probs=182.0
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC-ceEEEEEEEcCccC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG-GYITGNITISGYPK 925 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~-~~~~G~i~i~g~~~ 925 (1444)
+.|+|+++.++... ..+.+|+|+|+++++||+++|+||||||||||+++|+|.... .+.+|+|.++|.+.
T Consensus 4 ~~~~~~~~~~~~~~---------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~ 74 (226)
T cd03234 4 LPWWDVGLKAKNWN---------KYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPR 74 (226)
T ss_pred ceeecceeeeecCc---------cccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEEC
Confidence 45788887764210 135799999999999999999999999999999999997641 23589999999877
Q ss_pred CcccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHH-HHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 926 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEE-VMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 926 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~-~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
.....++.++|++|++..++.+||+||+.|.+....+.....+.....+++ .++.+++.+..++. ++.||||||
T Consensus 75 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 149 (226)
T cd03234 75 KPDQFQKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGER 149 (226)
T ss_pred ChHHhcccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHH
Confidence 544556789999999999999999999998765443222222223334555 89999998776655 457999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++..++.+.||++++|++ |++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999999998777899999999985578999999999986 7888765
No 111
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-36 Score=333.00 Aligned_cols=207 Identities=28% Similarity=0.402 Sum_probs=179.7
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCC----CCCccceEEEEcCCC-CCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMG----EFVPERTAAYISQHD-NHIG 239 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~----~~~~~~~~~yv~Q~d-~~~~ 239 (1444)
..+|+|+|+.+++|+.++|+||||||||||+++|+|.+.|. +|+|.++|.+.. ....++.+|||+|+| ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 56999999999999999999999999999999999999998 899999998865 223468899999997 4567
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000524 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1444)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1444)
..||.|.++|+.+..+... .+.+.+++.+++.+||.+.++.
T Consensus 94 ~~tV~~evafg~~n~g~~~----------------------------------~e~~~rv~~~l~~vgl~~~~~r----- 134 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPR----------------------------------EEIEERVAEALELVGLEELLDR----- 134 (235)
T ss_pred cCcHHHHHhhchhhcCCCH----------------------------------HHHHHHHHHHHHHcCchhhccC-----
Confidence 7899999999987765421 0123567889999999988764
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
.+..|||||||||+||.+|+.+|++|+|||||+|||+..+.++++.++++... ++.+||.++|+...+.+++|++++|+
T Consensus 135 ~p~~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~-~~~tii~~tHd~~~~~~~ad~v~vl~ 213 (235)
T COG1122 135 PPFNLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEE-GGKTIIIVTHDLELVLEYADRVVVLD 213 (235)
T ss_pred CccccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhc-CCCeEEEEeCcHHHHHhhCCEEEEEE
Confidence 45579999999999999999999999999999999999999999999998764 44555668899999999999999999
Q ss_pred CCeEEEecChhhHHH
Q 000524 400 DGQIVYQGPRELVLE 414 (1444)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1444)
+|+++++|++.++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999877653
No 112
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=7.8e-36 Score=337.28 Aligned_cols=215 Identities=27% Similarity=0.350 Sum_probs=179.6
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
+++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (236)
T cd03219 2 EVRGLTKRFG-------------GLVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITG 66 (236)
T ss_pred eeeeeEEEEC-------------CEEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCC
Confidence 4677776653 2469999999999999999999999999999999999865 348999999987643
Q ss_pred cc----ccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCC-------CCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000524 928 ET----FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPE-------VDSETRKMFIEEVMELVELKPLIQSLVGLPGV 996 (1444)
Q Consensus 928 ~~----~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~-------~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1444)
.. .++.++|++|++.+++.+||+|++.+....+.... ...+...+.++++++.+++.+..++. +
T Consensus 67 ~~~~~~~~~~i~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 141 (236)
T cd03219 67 LPPHEIARLGIGRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRP-----A 141 (236)
T ss_pred CCHHHHHhcCEEEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCC-----h
Confidence 21 23458999999999999999999988754332110 11233455688999999998777665 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |
T Consensus 142 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G 219 (236)
T cd03219 142 GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-G 219 (236)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-C
Confidence 579999999999999999999999999999999999999999999999877999999999986 57788999999986 7
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
++++.|+.
T Consensus 220 ~i~~~~~~ 227 (236)
T cd03219 220 RVIAEGTP 227 (236)
T ss_pred EEEeecCH
Confidence 99998875
No 113
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.1e-36 Score=307.54 Aligned_cols=201 Identities=25% Similarity=0.393 Sum_probs=173.1
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 000524 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1444)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1444)
..+..|++||+++|+|||||||||||++|+|...|. +|+|.+||++.+...| +|-++.++|+.++|..+||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 467889999999999999999999999999999998 9999999999887666 578999999999999999999999
Q ss_pred HhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccchhh
Q 000524 249 FSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGE 328 (1444)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1444)
++.. ++-+ +.. +....++.++...||..+.+...+ .|||||
T Consensus 94 LGl~---P~Lk------L~a-------------------------~~r~~v~~aa~~vGl~~~~~RLP~-----~LSGGq 134 (231)
T COG3840 94 LGLS---PGLK------LNA-------------------------EQREKVEAAAAQVGLAGFLKRLPG-----ELSGGQ 134 (231)
T ss_pred ccCC---cccc------cCH-------------------------HHHHHHHHHHHHhChhhHhhhCcc-----ccCchH
Confidence 8753 1111 000 112346788999999998876554 699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEEEecC
Q 000524 329 RKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1444)
Q Consensus 329 rqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~ 408 (1444)
||||++||+|+.+.+|++||||+|+||+.-+.+....+.+++...+.|+++ ++|..+++..++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~Tllm-VTH~~~Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLM-VTHHPEDAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEE-EeCCHHHHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999998766666655 5666678999999999999999999999
Q ss_pred hhhHH
Q 000524 409 RELVL 413 (1444)
Q Consensus 409 ~~~~~ 413 (1444)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 88764
No 114
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-36 Score=333.46 Aligned_cols=214 Identities=22% Similarity=0.339 Sum_probs=187.5
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|++|.++. +..+|+|+|+.+++||.++|+|+||||||||+++|+|...+ ..|.|.++|.+..
T Consensus 4 i~~~~l~~~y~~------------~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYPG------------RKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcCC------------CceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeecc
Confidence 678899988752 24799999999999999999999999999999999998764 4799999999865
Q ss_pred ----cccccceEEEEecCCCCC-CCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000524 927 ----QETFARISGYCEQNDIHS-PFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 927 ----~~~~~~~~gyv~q~~~~~-~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1001 (1444)
...+++.+|||+|++... -.-||.|.+.|+..-. ..+.++.+++++++++.+++.+.++.. +..|||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~---g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSG 141 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENL---GLPREEIEERVAEALELVGLEELLDRP-----PFNLSG 141 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhc---CCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCC
Confidence 345788899999998664 4579999999986433 345566788899999999999998776 468999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
||||||+||.+|+.+|++|+|||||||||+.+...+++.++++.++ |.|||+++|+.. .+.+.+|++++|++ |++++
T Consensus 142 GqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~ 219 (235)
T COG1122 142 GQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILA 219 (235)
T ss_pred cceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEee
Confidence 9999999999999999999999999999999999999999999877 689999999986 57888999999996 89999
Q ss_pred EcCC
Q 000524 1081 VGPL 1084 (1444)
Q Consensus 1081 ~G~~ 1084 (1444)
.|++
T Consensus 220 ~g~p 223 (235)
T COG1122 220 DGDP 223 (235)
T ss_pred cCCH
Confidence 9985
No 115
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.2e-36 Score=338.34 Aligned_cols=207 Identities=28% Similarity=0.361 Sum_probs=172.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------PERTAAYISQHDNHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++||+|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 45999999999999999999999999999999999999987 999999999876543 245799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+.+||+||+.++.+....... .+....++.+++.+||++..++.+
T Consensus 90 ~~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (235)
T cd03261 90 DSLTVFENVAFPLREHTRLSE---------------------------------EEIREIVLEKLEAVGLRGAEDLYP-- 134 (235)
T ss_pred CCCcHHHHHHHHHhhccCCCH---------------------------------HHHHHHHHHHHHHcCCchhhcCCh--
Confidence 999999999986432100000 001123567789999987666555
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|+|++|
T Consensus 135 ---~~LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~vsH~~~~~~~~~d~v~~l 210 (235)
T cd03261 135 ---AELSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELG-LTSIMVTHDLDTAFAIADRIAVL 210 (235)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcC-cEEEEEecCHHHHHHhcCEEEEE
Confidence 46999999999999999999999999999999999999999999999865334 45555778888899999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|++++.|+.+++.
T Consensus 211 ~~G~i~~~g~~~~~~ 225 (235)
T cd03261 211 YDGKIVAEGTPEELR 225 (235)
T ss_pred ECCeEEEecCHHHHc
Confidence 999999999987653
No 116
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.2e-36 Score=353.17 Aligned_cols=217 Identities=22% Similarity=0.289 Sum_probs=184.2
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++++|++++++.. ...+.+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~~---------~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p--~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQG---------GRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERP--TSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCCC---------CCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEECC
Confidence 5688888877411 0135699999999999999999999999999999999998653 4899999998764
Q ss_pred cc------cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000524 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 927 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1000 (1444)
.. .+++.+||++|+..+++.+||+||+.+....+. .+.++.++.++++++.++|.+..++.+ ..||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS 142 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAG---TPKAEIKARVTELLELVGLSDKADRYP-----AQLS 142 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCC
Confidence 31 235679999999999999999999998755431 233444567899999999988777663 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEE
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1079 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~ 1079 (1444)
||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.||++++|++ |+++
T Consensus 143 gGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~ 220 (343)
T PRK11153 143 GGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLV 220 (343)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 57788999999985 8999
Q ss_pred EEcCC
Q 000524 1080 YVGPL 1084 (1444)
Q Consensus 1080 y~G~~ 1084 (1444)
+.|+.
T Consensus 221 ~~g~~ 225 (343)
T PRK11153 221 EQGTV 225 (343)
T ss_pred EEcCH
Confidence 99985
No 117
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=9.5e-35 Score=365.95 Aligned_cols=217 Identities=29% Similarity=0.431 Sum_probs=181.9
Q ss_pred cCCCCceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEE
Q 000524 840 LPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNIT 919 (1444)
Q Consensus 840 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~ 919 (1444)
.|.-+..++|+|++|.|.. +...+|+|+|++|+|||.+||+|+||||||||+|+|+|... +.+|+|+
T Consensus 465 ~~~~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~ 531 (709)
T COG2274 465 LPKLQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRIL 531 (709)
T ss_pred ccccCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEE
Confidence 4445568999999999863 22369999999999999999999999999999999999876 4589999
Q ss_pred EcCccCCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccc
Q 000524 920 ISGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-------LIQS 989 (1444)
Q Consensus 920 i~g~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~ 989 (1444)
+||++.++ ..+|+.+|||+||+.++ +-|++||+.++. | +.+.+ .+.++++..|..+ -.|+
T Consensus 532 ~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf-~gSI~eNi~l~~----p-~~~~e----~i~~A~~~ag~~~fI~~lP~gy~t 601 (709)
T COG2274 532 LDGVDLNDIDLASLRRQVGYVLQDPFLF-SGSIRENIALGN----P-EATDE----EIIEAAQLAGAHEFIENLPMGYDT 601 (709)
T ss_pred ECCEeHHhcCHHHHHhheeEEcccchhh-cCcHHHHHhcCC----C-CCCHH----HHHHHHHHhCcHHHHHhccccccc
Confidence 99998654 46789999999999887 479999997642 2 22222 3455555555443 4466
Q ss_pred cccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceE
Q 000524 990 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDEL 1069 (1444)
Q Consensus 990 ~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v 1069 (1444)
.+|.. ..+||||||||++|||||+++|+||+||||||+||+.+++.|++.|.++. +|+|+|+++|+++ ....+|+|
T Consensus 602 ~v~E~-G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrI 677 (709)
T COG2274 602 PVGEG-GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRI 677 (709)
T ss_pred ccccC-CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEE
Confidence 67754 46899999999999999999999999999999999999999999999985 5799999999985 78999999
Q ss_pred EEEecCcEEEEEcCC
Q 000524 1070 FLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1070 ~ll~~gg~~~y~G~~ 1084 (1444)
++|++ |+++..|+.
T Consensus 678 iVl~~-Gkiv~~gs~ 691 (709)
T COG2274 678 IVLDQ-GKIVEQGSH 691 (709)
T ss_pred EEccC-CceeccCCH
Confidence 99985 899999986
No 118
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-36 Score=321.60 Aligned_cols=216 Identities=26% Similarity=0.344 Sum_probs=178.8
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++.+|++..++... ....+|+|||+++.+||++||+|+||||||||.++|+|...+ .+|+|.++|.+..
T Consensus 4 l~v~nl~~~y~~~~---------~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~~ 72 (252)
T COG1124 4 LSVRNLSIVYGGGK---------FAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPLA 72 (252)
T ss_pred EEEeceEEEecCCc---------chhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCcccC
Confidence 67788877765321 112599999999999999999999999999999999998764 5899999998754
Q ss_pred cc----cccceEEEEecCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcC
Q 000524 927 QE----TFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLPGVSGL 999 (1444)
Q Consensus 927 ~~----~~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~l 999 (1444)
.. .+.+.+.+|+||+. +.|..||++.|.=.... ...++.++ ++.++++.+||.+. .+.. +..|
T Consensus 73 ~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~---~~~~~~~~--~i~~~L~~VgL~~~~l~R~-----P~eL 142 (252)
T COG1124 73 PKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP---HGLSKSQQ--RIAELLDQVGLPPSFLDRR-----PHEL 142 (252)
T ss_pred ccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc---CCccHHHH--HHHHHHHHcCCCHHHHhcC-----chhc
Confidence 43 36778999999986 45889999988654332 22233332 38999999999864 3333 4579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEE
Q 000524 1000 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1078 (1444)
Q Consensus 1000 SgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~ 1078 (1444)
|||||||++|||||+.+|++|+||||||.||+..++.|++.|.++.++ |-|.|+++|+.+ -+..+|||+++|++ |++
T Consensus 143 SGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~-~v~~~cdRi~Vm~~-G~i 220 (252)
T COG1124 143 SGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLA-LVEHMCDRIAVMDN-GQI 220 (252)
T ss_pred ChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHH-HHHHHhhheeeeeC-CeE
Confidence 999999999999999999999999999999999999999999999765 779999999987 48889999999996 899
Q ss_pred EEEcCCC
Q 000524 1079 IYVGPLG 1085 (1444)
Q Consensus 1079 ~y~G~~~ 1085 (1444)
+..+|.+
T Consensus 221 vE~~~~~ 227 (252)
T COG1124 221 VEIGPTE 227 (252)
T ss_pred EEeechh
Confidence 9999974
No 119
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=5.1e-36 Score=354.83 Aligned_cols=210 Identities=27% Similarity=0.401 Sum_probs=177.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1444)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++.+++.+||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 35999999999999999999999999999999999999998 9999999998865544 3679999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
+||+.|+.+....... + + ..+...+++.+++.+||++..|..+ ..
T Consensus 92 ~eni~~~~~~~~~~~~-----------------~--~-----------~~~~~~~~~~~l~~~~L~~~~~~~~-----~~ 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRER-----------------P--N-----------AAAIKAKVTQLLEMVQLAHLADRYP-----AQ 136 (353)
T ss_pred HHHHHhhhhhcccccC-----------------C--C-----------HHHHHHHHHHHHHHcCCchhhhCCh-----hh
Confidence 9999997653210000 0 0 0011234678899999987776554 57
Q ss_pred cchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000524 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1444)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~-g~tii~vTHd~~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEEL-KFTSVFVTHDQEEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987533 45566688999999999999999999999
Q ss_pred EEecChhhHH
Q 000524 404 VYQGPRELVL 413 (1444)
Q Consensus 404 v~~G~~~~~~ 413 (1444)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 120
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-36 Score=319.61 Aligned_cols=207 Identities=25% Similarity=0.382 Sum_probs=174.0
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCcc----ceEEEEcCCCCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE----RTAAYISQHDNHIG 239 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 239 (1444)
+.++|++||+.+++||+++|+||||+|||||||+|+|..++. +|+|.++|++++...+. +-++||||....|+
T Consensus 15 ~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~ 91 (237)
T COG0410 15 KIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFP 91 (237)
T ss_pred ceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchh
Confidence 467999999999999999999999999999999999999987 99999999999987664 56899999999999
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhC-CcccccccccC
Q 000524 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LEVCADTMVGD 318 (1444)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~ 318 (1444)
.|||+|||..++..+.... . . ....|.+.+.|- |.+-.+..-|
T Consensus 92 ~LTVeENL~~g~~~~~~~~-----------~------~------------------~~~~e~v~~lFP~Lker~~~~aG- 135 (237)
T COG0410 92 RLTVEENLLLGAYARRDKE-----------A------Q------------------ERDLEEVYELFPRLKERRNQRAG- 135 (237)
T ss_pred hCcHHHHHhhhhhcccccc-----------c------c------------------cccHHHHHHHChhHHHHhcCccc-
Confidence 9999999998764321100 0 0 000233344442 4444455544
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
.|||||||-++|||||+++|++|+|||||.||-|.-..+|.+.|+++.+. ++.+|+.+.|+...+.+++|+.++|
T Consensus 136 ----~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~-~g~tIlLVEQn~~~Al~iaDr~yvl 210 (237)
T COG0410 136 ----TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKE-GGMTILLVEQNARFALEIADRGYVL 210 (237)
T ss_pred ----CCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHc-CCcEEEEEeccHHHHHHhhCEEEEE
Confidence 59999999999999999999999999999999999999999999998764 3567777999999999999999999
Q ss_pred cCCeEEEecChhhHHH
Q 000524 399 SDGQIVYQGPRELVLE 414 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1444)
.+|+|++.|+.+++.+
T Consensus 211 e~Griv~~G~~~eL~~ 226 (237)
T COG0410 211 ENGRIVLSGTAAELLA 226 (237)
T ss_pred eCCEEEEecCHHHHhc
Confidence 9999999999998853
No 121
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-35 Score=336.08 Aligned_cols=216 Identities=25% Similarity=0.378 Sum_probs=180.8
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRFG-------------DFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEEC-------------CEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 67888887763 2469999999999999999999999999999999999865 35899999998764
Q ss_pred cc-cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 927 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 927 ~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
.. ..++.++|++|++.+++.+||+|++.+....+.. .........+.++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHH
Confidence 32 2245689999999888899999999886543211 00122333456789999999987777653 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 220 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVGT 220 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecC
Confidence 9999999999999999999999999999999999999999875 899999999986 57888999999985 79999987
Q ss_pred C
Q 000524 1084 L 1084 (1444)
Q Consensus 1084 ~ 1084 (1444)
.
T Consensus 221 ~ 221 (239)
T cd03296 221 P 221 (239)
T ss_pred H
Confidence 5
No 122
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=352.30 Aligned_cols=206 Identities=26% Similarity=0.364 Sum_probs=175.7
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc------cceEEEEcCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1444)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++||+|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 56999999999999999999999999999999999999997 9999999998865432 35799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+.+||+||+.++.+..+... .+....++.+++.+||++..++.+
T Consensus 95 ~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 138 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTPK----------------------------------AEIKARVTELLELVGLSDKADRYP-- 138 (343)
T ss_pred CCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh--
Confidence 99999999998754432100 001124567899999987777654
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
+.|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.++||+|++|
T Consensus 139 ---~~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tiilvtH~~~~i~~~~d~v~~l 214 (343)
T PRK11153 139 ---AQLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINREL-GLTIVLITHEMDVVKRICDRVAVI 214 (343)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999986533 445555788888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999988774
No 123
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=9.9e-36 Score=335.54 Aligned_cols=212 Identities=26% Similarity=0.348 Sum_probs=179.5
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
.++|+++.++ .+.+|+|+|+.+++||+++|+|||||||||||++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~ 66 (232)
T cd03218 2 RAENLSKRYG-------------KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKP--DSGKILLDGQDITK 66 (232)
T ss_pred eEEEEEEEeC-------------CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccc
Confidence 5677777663 24699999999999999999999999999999999998653 47999999987543
Q ss_pred c---c-ccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000524 928 E---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 1003 (1444)
Q Consensus 928 ~---~-~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1003 (1444)
. . .++.++|++|++.+++.+||+|++.+....+. ...+.....++++++.+++.+..++. +..|||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~ 138 (232)
T cd03218 67 LPMHKRARLGIGYLPQEASIFRKLTVEENILAVLEIRG---LSKKEREEKLEELLEEFHITHLRKSK-----ASSLSGGE 138 (232)
T ss_pred CCHhHHHhccEEEecCCccccccCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCC-----hhhCCHHH
Confidence 1 1 23468999999999999999999987643332 22333445688999999998877665 35799999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1004 rkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|+
T Consensus 139 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 216 (232)
T cd03218 139 RRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGT 216 (232)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeC
Confidence 99999999999999999999999999999999999999999877999999999986 68899999999985 79999887
Q ss_pred C
Q 000524 1084 L 1084 (1444)
Q Consensus 1084 ~ 1084 (1444)
.
T Consensus 217 ~ 217 (232)
T cd03218 217 P 217 (232)
T ss_pred H
Confidence 5
No 124
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=7.9e-36 Score=333.08 Aligned_cols=215 Identities=27% Similarity=0.419 Sum_probs=179.8
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++.. .....+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 70 (218)
T cd03266 2 ITADALTKRFRDV---------KKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEP--DAGFATVDGFDVV 70 (218)
T ss_pred eEEEEEEEecCCC---------CccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEEcc
Confidence 4678888776411 0112699999999999999999999999999999999998653 4899999998764
Q ss_pred c--ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 927 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 927 ~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
. ..+++.++|++|++.+++.+||+|++.+....+. ...++..+.++++++.++|.+..+..+ ..||||||
T Consensus 71 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (218)
T cd03266 71 KEPAEARRRLGFVSDSTGLYDRLTARENLEYFAGLYG---LKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMR 142 (218)
T ss_pred cCHHHHHhhEEEecCCcccCcCCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHH
Confidence 3 2345679999999988899999999987654431 233444567899999999988777653 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 143 qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 143 QKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 9999999999999999999999999999999999999999777999999999986 67888999999986 7877654
No 125
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.7e-36 Score=350.43 Aligned_cols=206 Identities=27% Similarity=0.374 Sum_probs=176.7
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1444)
+++|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999998 999999998875421 2457999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+||+.+.++..+... .+...+++.+++.+||++..++.++
T Consensus 83 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 123 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------------------------------DEAEERAEELLELFELGEAADRPVG----- 123 (302)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhCCchh-----
Confidence 9999998765432110 0011245778999999988777664
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ . +++|+.++|..+++.++||+|++|++|+
T Consensus 124 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~tvi~~sH~~~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 124 TYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-E-GVTILLTTHYMEEADKLCDRIAIIDHGR 201 (302)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999864 3 4556667888899999999999999999
Q ss_pred EEEecChhhHHH
Q 000524 403 IVYQGPRELVLE 414 (1444)
Q Consensus 403 iv~~G~~~~~~~ 414 (1444)
+++.|+.+++.+
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999988754
No 126
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=354.85 Aligned_cols=214 Identities=25% Similarity=0.363 Sum_probs=185.0
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|+++.+. ++.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+.
T Consensus 3 ~l~i~~l~~~~~-------------~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p--~~G~I~~~g~~i 67 (369)
T PRK11000 3 SVTLRNVTKAYG-------------DVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDI--TSGDLFIGEKRM 67 (369)
T ss_pred EEEEEEEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 367888887763 24699999999999999999999999999999999998653 489999999876
Q ss_pred Ccc-cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 926 KQE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 926 ~~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
... ..++.+||++|+..+++.+||+||+.|....+. .+.++.++.++++++.++|.+..++.+ ..||||||
T Consensus 68 ~~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~---~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~ 139 (369)
T PRK11000 68 NDVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG---AKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQR 139 (369)
T ss_pred CCCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcC---CCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 432 234679999999999999999999998765432 233445567899999999998777764 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++...+|++++|++ |+++..|+
T Consensus 140 QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~ 217 (369)
T PRK11000 140 QRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGK 217 (369)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcC
Confidence 9999999999999999999999999999999999999998765 899999999986 68889999999985 89999998
Q ss_pred C
Q 000524 1084 L 1084 (1444)
Q Consensus 1084 ~ 1084 (1444)
.
T Consensus 218 ~ 218 (369)
T PRK11000 218 P 218 (369)
T ss_pred H
Confidence 5
No 127
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.1e-36 Score=379.30 Aligned_cols=207 Identities=29% Similarity=0.444 Sum_probs=174.0
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1444)
.+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||+++++.++ |+.++||+|++.+|. -|
T Consensus 487 ~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gS 562 (709)
T COG2274 487 PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFS-GS 562 (709)
T ss_pred chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhhc-Cc
Confidence 5899999999999999999999999999999999999998 9999999999988765 589999999986655 69
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+||+.++. |+.+.++.+.|+...+.. | .+..++..+||.||+.+.
T Consensus 563 I~eNi~l~~-------------------------p~~~~e~i~~A~~~ag~~-----~---fI~~lP~gy~t~v~E~G~- 608 (709)
T COG2274 563 IRENIALGN-------------------------PEATDEEIIEAAQLAGAH-----E---FIENLPMGYDTPVGEGGA- 608 (709)
T ss_pred HHHHHhcCC-------------------------CCCCHHHHHHHHHHhCcH-----H---HHHhcccccccccccCCC-
Confidence 999999863 222223333333322211 1 234688999999997654
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
+||||||||++|||||+++|+||+||||||+||+.+...|.+.|.++. .++|+|+..|+ ..+.+.+|+|++|++|+
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~~T~I~IaHR--l~ti~~adrIiVl~~Gk 684 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QGRTVIIIAHR--LSTIRSADRIIVLDQGK 684 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cCCeEEEEEcc--chHhhhccEEEEccCCc
Confidence 899999999999999999999999999999999999999999999875 35676665543 45889999999999999
Q ss_pred EEEecChhhHHH
Q 000524 403 IVYQGPRELVLE 414 (1444)
Q Consensus 403 iv~~G~~~~~~~ 414 (1444)
|+.+|+++++++
T Consensus 685 iv~~gs~~ell~ 696 (709)
T COG2274 685 IVEQGSHEELLA 696 (709)
T ss_pred eeccCCHHHHHH
Confidence 999999999986
No 128
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-36 Score=356.03 Aligned_cols=206 Identities=23% Similarity=0.316 Sum_probs=178.0
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1444)
..+|+|+|+.+++|++++|+|||||||||||++|+|..+|+ +|+|.++|+++....+ ++.++||+|++.+||++||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35899999999999999999999999999999999999998 9999999998876544 4789999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
.||+.|+.+.++... .+...+++++++.+||.+..+..+ ++
T Consensus 109 ~eNi~~~l~~~~~~~----------------------------------~~~~~~v~~~l~~l~L~~~~~~~~-----~~ 149 (377)
T PRK11607 109 EQNIAFGLKQDKLPK----------------------------------AEIASRVNEMLGLVHMQEFAKRKP-----HQ 149 (377)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 999999865432110 012234678899999987766544 57
Q ss_pred cchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000524 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1444)
|||||||||+|||||+.+|++||||||+++||..++..+.+.|+++.+..+ .+++.++|+..++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g-~tii~vTHd~~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVG-VTCVMVTHDQEEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEcCCHHHHHHhCCEEEEEeCCEE
Confidence 999999999999999999999999999999999999999999988866444 5556688899999999999999999999
Q ss_pred EEecChhhHH
Q 000524 404 VYQGPRELVL 413 (1444)
Q Consensus 404 v~~G~~~~~~ 413 (1444)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 129
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-35 Score=352.44 Aligned_cols=214 Identities=23% Similarity=0.355 Sum_probs=187.0
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|++..+. +..+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 19 ~l~l~~v~~~~~-------------~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p--~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSFD-------------GQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQP--TAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 488999987763 24699999999999999999999999999999999998763 489999999876
Q ss_pred Cc-ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 926 KQ-ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 926 ~~-~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
.. ...+|.+|||+|+..++|.+||.||+.|....+ ..+..+.+++++++++.++|.+..+.. +..||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~---~~~~~~~~~~v~~~l~~l~L~~~~~~~-----~~~LSgGq~ 155 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQD---KLPKAEIASRVNEMLGLVHMQEFAKRK-----PHQLSGGQR 155 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHHHH
Confidence 43 234678999999999999999999999976543 234455566789999999999887776 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
|||+|||||+.+|++|+|||||++||..++..+.+.|+++.++ |.|+|++||++. ++..++|++++|++ |+++..|+
T Consensus 156 QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~ 233 (377)
T PRK11607 156 QRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGE 233 (377)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcC
Confidence 9999999999999999999999999999999999999988654 899999999986 78999999999985 89999998
Q ss_pred C
Q 000524 1084 L 1084 (1444)
Q Consensus 1084 ~ 1084 (1444)
.
T Consensus 234 ~ 234 (377)
T PRK11607 234 P 234 (377)
T ss_pred H
Confidence 6
No 130
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1e-35 Score=342.94 Aligned_cols=205 Identities=21% Similarity=0.252 Sum_probs=154.6
Q ss_pred CCceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcC
Q 000524 843 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG 922 (1444)
Q Consensus 843 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 922 (1444)
.|..+.+.+|.+.++. +..+++.+++..+..-+..+++|+||+||||+++++.|..+ +..|.+.+.+
T Consensus 359 ~~p~l~i~~V~f~y~p-----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~ 425 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTP-----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP 425 (582)
T ss_pred CCCeeEEEeeeccCCC-----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc
Confidence 4456888888877642 11268999999999999999999999999999999998654 2466666544
Q ss_pred ccCCcccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 923 YPKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 923 ~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
++.++|-.|..+-+-.+.|.+ +.+....+ |..+ ++.+++-+..+||..-.- ...+.+||||
T Consensus 426 --------r~ri~~f~Qhhvd~l~~~v~~-vd~~~~~~-pG~~-----~ee~r~hl~~~Gl~g~la----~~si~~LSGG 486 (582)
T KOG0062|consen 426 --------RLRIKYFAQHHVDFLDKNVNA-VDFMEKSF-PGKT-----EEEIRRHLGSFGLSGELA----LQSIASLSGG 486 (582)
T ss_pred --------cceecchhHhhhhHHHHHhHH-HHHHHHhC-CCCC-----HHHHHHHHHhcCCCchhh----hccccccCCc
Confidence 456789888766554445443 23333333 2222 223567788999975321 2225789999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
||-||++|.....+|.+|+|||||+.||..+-..+-++|++. +..||+++|+-+. |-..|+++.+.++|.-.-+.|
T Consensus 487 QKsrvafA~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ieg 562 (582)
T KOG0062|consen 487 QKSRVAFAACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIEG 562 (582)
T ss_pred chhHHHHHHHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeeec
Confidence 999999999999999999999999999999999999999887 5689999999753 777899999999754444444
Q ss_pred C
Q 000524 1083 P 1083 (1444)
Q Consensus 1083 ~ 1083 (1444)
.
T Consensus 563 ~ 563 (582)
T KOG0062|consen 563 G 563 (582)
T ss_pred c
Confidence 4
No 131
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=8.5e-36 Score=352.00 Aligned_cols=202 Identities=25% Similarity=0.297 Sum_probs=178.1
Q ss_pred ceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc---cc----cceEEEEecCCCC
Q 000524 871 KLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE---TF----ARISGYCEQNDIH 943 (1444)
Q Consensus 871 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~~----~~~~gyv~q~~~~ 943 (1444)
.+.+|+|+||+|++||+++|+|||||||||||++|+|...+ .+|+|.++|.++... .+ ++.+|||+|+..+
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p--~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEP--TAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCC--CceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 45699999999999999999999999999999999998763 589999999886532 22 5689999999999
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000524 944 SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1023 (1444)
Q Consensus 944 ~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLD 1023 (1444)
+|.+||+||+.|...+. ..+.+++.+++.++++.++|.+..++.+ ..||||||||++|||||+.+|+||+||
T Consensus 83 ~~~~TV~eNi~~~~~~~---~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 83 FPHMTILQNTSLGPELL---GWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCCCCHHHHHHHHHHHc---CCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99999999999876543 2345556678999999999988877764 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1024 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1024 EPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|||++||+.++..+++.++++.++ |+|||+++|++. ++...+|++++|++ |+++..|+.
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~ 214 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTP 214 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCH
Confidence 999999999999999999999754 899999999986 58899999999985 799999975
No 132
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.2e-35 Score=346.47 Aligned_cols=212 Identities=23% Similarity=0.357 Sum_probs=183.9
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|++.++. ++.+|+|+||++++||++||+|||||||||||++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~ 67 (301)
T TIGR03522 3 IRVSSLTKLYG-------------TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVL 67 (301)
T ss_pred EEEEEEEEEEC-------------CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 67788877763 2469999999999999999999999999999999999865 35899999998764
Q ss_pred cc--cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 927 QE--TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 927 ~~--~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
.. ..++.+||++|++.+++.+||.|++.|.+.++. ...++..+.++++++.+||.+..++.+ +.||||||
T Consensus 68 ~~~~~~~~~ig~~~q~~~l~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 139 (301)
T TIGR03522 68 QNPKEVQRNIGYLPEHNPLYLDMYVREYLQFIAGIYG---MKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYR 139 (301)
T ss_pred cChHHHHhceEEecCCCCCCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHH
Confidence 32 345679999999999999999999998776542 223344556899999999998888774 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
||++||+||+++|++|+|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 140 QRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999999864 799999999986 68899999999985 899999986
No 133
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=8.9e-36 Score=355.89 Aligned_cols=217 Identities=26% Similarity=0.362 Sum_probs=184.3
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+. ++.+|+|+||.+++||+++|+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 4 L~~~nls~~y~-------------~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p--~sG~I~l~G~~i~ 68 (402)
T PRK09536 4 IDVSDLSVEFG-------------DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTP--TAGTVLVAGDDVE 68 (402)
T ss_pred EEEeeEEEEEC-------------CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCC--CCcEEEECCEEcC
Confidence 67888887763 35699999999999999999999999999999999998653 5899999998764
Q ss_pred c---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 927 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-EVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 927 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
. ...++.+||++|+..+++.+||+|++.+........ ....+..++.++++++.+++.+..++. ++.||||
T Consensus 69 ~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~-----~~~LSgG 143 (402)
T PRK09536 69 ALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRP-----VTSLSGG 143 (402)
T ss_pred cCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCC-----hhhCCHH
Confidence 3 335677999999999888999999998754211100 111233455689999999999888776 4579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
||||+.|||+|+++|+||+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|
T Consensus 144 erQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~G 221 (402)
T PRK09536 144 ERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAAG 221 (402)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 999999999999999999999999999999999999999999877999999999986 68889999999985 8999999
Q ss_pred CCC
Q 000524 1083 PLG 1085 (1444)
Q Consensus 1083 ~~~ 1085 (1444)
+..
T Consensus 222 ~~~ 224 (402)
T PRK09536 222 PPA 224 (402)
T ss_pred CHH
Confidence 863
No 134
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=9.4e-36 Score=329.94 Aligned_cols=206 Identities=29% Similarity=0.390 Sum_probs=175.0
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
+++|+++.++ .+.+|+|+|+++++|++++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~ 66 (208)
T cd03268 2 KTNDLTKTYG-------------KKRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQK 66 (208)
T ss_pred EEEEEEEEEC-------------CeEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccc
Confidence 5677776663 2469999999999999999999999999999999999765 358999999987643
Q ss_pred -ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000524 928 -ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 1006 (1444)
Q Consensus 928 -~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkR 1006 (1444)
...++.++|++|++.+++.+||+|++.+....+. . .++.++++++.++|.+..++.+ ..||||||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~----~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 134 (208)
T cd03268 67 NIEALRRIGALIEAPGFYPNLTARENLRLLARLLG---I----RKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQR 134 (208)
T ss_pred hHHHHhhEEEecCCCccCccCcHHHHHHHHHHhcC---C----cHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHH
Confidence 2335678999999988889999999987654321 1 1335788999999988777653 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1007 l~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 135 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 135 LGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999998877899999999986 57788999999986 7887764
No 135
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.1e-35 Score=333.92 Aligned_cols=215 Identities=24% Similarity=0.298 Sum_probs=177.2
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCC---CceEEEEEEEcCcc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT---GGYITGNITISGYP 924 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~---~~~~~G~i~i~g~~ 924 (1444)
.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|... ..+.+|+|.++|.+
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~ 68 (227)
T cd03260 2 ELRDLNVYYG-------------DKHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKD 68 (227)
T ss_pred EEEEEEEEcC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEE
Confidence 5677776653 2369999999999999999999999999999999999761 02458999999987
Q ss_pred CCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000524 925 KKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGL 999 (1444)
Q Consensus 925 ~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~l 999 (1444)
... ..+++.++|++|++.++ .+||+||+.+....+. ....+..++.++++++.++|.+..+.... +..|
T Consensus 69 ~~~~~~~~~~~~~~i~~~~q~~~~~-~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~L 142 (227)
T cd03260 69 IYDLDVDVLELRRRVGMVFQKPNPF-PGSIYDNVAYGLRLHG--IKLKEELDERVEEALRKAALWDEVKDRLH---ALGL 142 (227)
T ss_pred hhhcchHHHHHHhhEEEEecCchhc-cccHHHHHHhHHHhcC--CCcHHHHHHHHHHHHHHcCCChHHhccCC---cccC
Confidence 542 22456789999998877 7999999988654431 11222234568899999999877665421 2579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEE
Q 000524 1000 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1079 (1444)
Q Consensus 1000 SgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~ 1079 (1444)
|||||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ +|||+++|++. ++.+.||++++|++ |+++
T Consensus 143 SgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~ 219 (227)
T cd03260 143 SGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GRLV 219 (227)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CEEE
Confidence 999999999999999999999999999999999999999999999876 99999999986 57788999999986 7999
Q ss_pred EEcCC
Q 000524 1080 YVGPL 1084 (1444)
Q Consensus 1080 y~G~~ 1084 (1444)
+.|+.
T Consensus 220 ~~g~~ 224 (227)
T cd03260 220 EFGPT 224 (227)
T ss_pred EecCc
Confidence 99875
No 136
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-36 Score=355.39 Aligned_cols=206 Identities=26% Similarity=0.380 Sum_probs=176.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|++.+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999997 9999999998865443 4679999999999999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
+||+.|+.+..+... .+...+++++++.+||++..+..+ ..
T Consensus 93 ~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~lgL~~~~~~~~-----~~ 133 (369)
T PRK11000 93 AENMSFGLKLAGAKK----------------------------------EEINQRVNQVAEVLQLAHLLDRKP-----KA 133 (369)
T ss_pred HHHHHhHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCCh-----hh
Confidence 999999765332100 011224677899999987777555 46
Q ss_pred cchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000524 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1444)
|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+..+ ++++.++|+..++..++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tvI~vTHd~~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLG-RTMIYVTHDQVEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhC-CEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999865434 4555678888899999999999999999
Q ss_pred EEecChhhHH
Q 000524 404 VYQGPRELVL 413 (1444)
Q Consensus 404 v~~G~~~~~~ 413 (1444)
++.|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 137
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.3e-35 Score=331.23 Aligned_cols=207 Identities=28% Similarity=0.395 Sum_probs=172.0
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
+++|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~~---------~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~ 70 (218)
T cd03255 2 ELKNLSKTYGGG---------GEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISK 70 (218)
T ss_pred eEeeeEEEecCC---------CcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhh
Confidence 567787776310 001469999999999999999999999999999999999865 348999999987543
Q ss_pred cc-------ccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000524 928 ET-------FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 928 ~~-------~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1000 (1444)
.. .++.++|++|++.+++.+||+|++.+....+. ......++.++++++.+||.+..++.+ +.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 142 (218)
T cd03255 71 LSEKELAAFRRRHIGFVFQSFNLLPDLTALENVELPLLLAG---VPKKERRERAEELLERVGLGDRLNHYP-----SELS 142 (218)
T ss_pred cchhHHHHHHhhcEEEEeeccccCCCCcHHHHHHHHHhhcC---CCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcC
Confidence 11 24578999999999999999999998765432 223334456889999999988777653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcceEEEEecC
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRG 1075 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~t~Hqps~~i~~~fD~v~ll~~g 1075 (1444)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||+++|+++ ++ +.||++++|++|
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~l~~G 216 (218)
T cd03255 143 GGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIELRDG 216 (218)
T ss_pred HHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEEeeCC
Confidence 9999999999999999999999999999999999999999999977 5899999999986 35 489999999863
No 138
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.7e-36 Score=349.27 Aligned_cols=229 Identities=24% Similarity=0.369 Sum_probs=187.6
Q ss_pred cCCCCCccEEEEeceEEEEEEecCCCcCCChhHHHHHHHHHHHhhhccCCCccccceEeeceeeEEeCCeEEEEEcCCCC
Q 000524 110 VGIDLPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLGPPAS 189 (1444)
Q Consensus 110 ~~~~~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilGp~Gs 189 (1444)
..+..|.=.++|+|++.+-. ++++||+++||+|++||-+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCC
Confidence 46777778899999987632 224599999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCCCHHHHHHHhhhhcCCCchhhHhHHH
Q 000524 190 GKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTEL 266 (1444)
Q Consensus 190 GKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 266 (1444)
||||+|++|.+..+ . +|+|.+||+++.+..+ |+.+|||||+..+|. .||.+||.++..- ..++.+.+.
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn~s----as~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGNPS----ASDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCCCC----cCHHHHHHH
Confidence 99999999999998 4 8999999999987655 578999999876555 6999999997421 223444444
Q ss_pred HHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccchhhhhHHHHHHHHhcCCccce
Q 000524 267 ARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALF 346 (1444)
Q Consensus 267 ~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vll 346 (1444)
|++.. + .| -...|++.++|.||+++. -|||||||||++|||++.+|+|++
T Consensus 461 ~k~a~---~-----------------------hd---~i~~l~~GY~T~VGerG~-~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKRAG---L-----------------------HD---VISRLPDGYQTLVGERGL-MLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHHcC---c-----------------------HH---HHHhccccchhhHhhccc-ccccchHHHHHHHHHHhcCCCeEE
Confidence 44321 0 11 134588999999999876 599999999999999999999999
Q ss_pred eecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEEEecChhhHHH
Q 000524 347 MDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLE 414 (1444)
Q Consensus 347 LDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~ 414 (1444)
+|||||.||+.|..+|++.+.... .++|+|+. .|.. .+..-||+|++|++|++...|++++++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~~--~~rTvI~I-vH~l-~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDVM--SGRTVIMI-VHRL-DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHhc--CCCeEEEE-Eecc-hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 999999999999999999998732 45666664 4543 4678899999999999999999999975
No 139
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-35 Score=334.09 Aligned_cols=217 Identities=24% Similarity=0.312 Sum_probs=181.3
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 i~~~~l~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 70 (233)
T cd03258 2 IELKNVSKVFGDT---------GGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERP--TSGSVLVDGTDLT 70 (233)
T ss_pred eEEecceEEccCC---------CCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcc
Confidence 4677887766310 0012699999999999999999999999999999999998653 4799999998764
Q ss_pred cc------cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000524 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 927 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1000 (1444)
.. ..++.++|++|++.+++.+|++|++.+....+. .......+.++++++.++|.+..+.. +..||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 142 (233)
T cd03258 71 LLSGKELRKARRRIGMIFQHFNLLSSRTVFENVALPLEIAG---VPKAEIEERVLELLELVGLEDKADAY-----PAQLS 142 (233)
T ss_pred cCCHHHHHHHHhheEEEccCcccCCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHCCChhhhhcC-----hhhCC
Confidence 31 135678999999999999999999988654332 23334455688999999998877765 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEE
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1079 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~ 1079 (1444)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 143 ~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~ 220 (233)
T cd03258 143 GGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVV 220 (233)
T ss_pred HHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 57788999999985 8999
Q ss_pred EEcCC
Q 000524 1080 YVGPL 1084 (1444)
Q Consensus 1080 y~G~~ 1084 (1444)
+.|+.
T Consensus 221 ~~~~~ 225 (233)
T cd03258 221 EEGTV 225 (233)
T ss_pred EecCH
Confidence 98874
No 140
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-36 Score=322.38 Aligned_cols=221 Identities=27% Similarity=0.380 Sum_probs=187.6
Q ss_pred ccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCcc----ceEEEEcCCCCCC
Q 000524 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE----RTAAYISQHDNHI 238 (1444)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1444)
....+++|||+.+++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...++ .-++--+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 4578999999999999999999999999999999999999998 99999999999988764 3577889999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
++|||.||+..++..+.. +...... |.. ..+..+...++..+|+.+||.+.+|+..|+
T Consensus 92 ~~lTVlENv~va~~~~~~---~~~~l~~----------~~~---------~~~e~~~~e~A~~~Le~vgL~~~a~~~A~~ 149 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LSGLLGR----------PRA---------RKEEREARERARELLEFVGLGELADRPAGN 149 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hhhhhcc----------ccc---------hhhHHHHHHHHHHHHHHcCCchhhcchhhc
Confidence 999999999998764421 0000000 000 000112334578899999999999988874
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.|+++.+ .++++|+.+-|++.-++++||+|++|
T Consensus 150 -----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~-~~g~tillIEHdM~~Vm~l~dri~Vl 223 (250)
T COG0411 150 -----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRD-RGGVTILLIEHDMKLVMGLADRIVVL 223 (250)
T ss_pred -----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHh-cCCcEEEEEEeccHHHhhhccEEEec
Confidence 999999999999999999999999999999999999999999999875 35577777999999999999999999
Q ss_pred cCCeEEEecChhhHHH
Q 000524 399 SDGQIVYQGPRELVLE 414 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1444)
+.|+++.+|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999864
No 141
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-35 Score=336.38 Aligned_cols=216 Identities=26% Similarity=0.315 Sum_probs=177.5
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
+++|+++.+. +++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 67 (241)
T cd03256 2 EVENLSKTYP------------NGKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEP--TSGSVLIDGTDINK 67 (241)
T ss_pred EEeeEEEecC------------CccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CCceEEECCEeccc
Confidence 4677776653 114699999999999999999999999999999999997653 47999999987643
Q ss_pred c------cccceEEEEecCCCCCCCCcHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000524 928 E------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRL-----PPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 996 (1444)
Q Consensus 928 ~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1444)
. ..++.++|++|++.+++.+||+|++.+...... ..........+.++++++.++|.+..++. +
T Consensus 68 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 142 (241)
T cd03256 68 LKGKALRQLRRQIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----A 142 (241)
T ss_pred cCHhHHHHHHhccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----c
Confidence 1 235678999999998899999999987532110 00111123345688899999998776665 3
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecC
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1075 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~g 1075 (1444)
..||||||||++||++|+.+|+||+|||||+|||+.+...+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 143 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~- 220 (241)
T cd03256 143 DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD- 220 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 579999999999999999999999999999999999999999999999764 899999999996 57779999999986
Q ss_pred cEEEEEcCC
Q 000524 1076 GQEIYVGPL 1084 (1444)
Q Consensus 1076 g~~~y~G~~ 1084 (1444)
|++++.|+.
T Consensus 221 G~i~~~~~~ 229 (241)
T cd03256 221 GRIVFDGPP 229 (241)
T ss_pred CEEEeecCH
Confidence 799999875
No 142
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.7e-35 Score=333.63 Aligned_cols=214 Identities=22% Similarity=0.343 Sum_probs=180.8
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 66 (240)
T PRK09493 2 IEFKNVSKHFG-------------PTQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVN 66 (240)
T ss_pred EEEEeEEEEEC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 46778877663 2469999999999999999999999999999999999765 35899999998764
Q ss_pred c-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000524 927 Q-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 927 ~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1001 (1444)
. ...++.++|++|++..++.+||+|++.+...... .......++.+.++++.+||.+..+.. ++.|||
T Consensus 67 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~ 139 (240)
T PRK09493 67 DPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGPLRVR--GASKEEAEKQARELLAKVGLAERAHHY-----PSELSG 139 (240)
T ss_pred cCChhHHHHhhceEEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCChHHHhcC-----hhhcCH
Confidence 2 2335678999999988889999999987642111 123334455688999999998777765 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1081 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~ 1081 (1444)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.
T Consensus 140 G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (240)
T PRK09493 140 GQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAED 217 (240)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999986 57788999999985 899999
Q ss_pred cCC
Q 000524 1082 GPL 1084 (1444)
Q Consensus 1082 G~~ 1084 (1444)
|+.
T Consensus 218 g~~ 220 (240)
T PRK09493 218 GDP 220 (240)
T ss_pred CCH
Confidence 885
No 143
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1e-35 Score=328.72 Aligned_cols=192 Identities=29% Similarity=0.370 Sum_probs=163.4
Q ss_pred eEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEEecCCC-CCCCCcHH
Q 000524 872 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDI-HSPFVTVY 950 (1444)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~-~~~~lTv~ 950 (1444)
+.+|+|+|+++++||+++|+|||||||||||++|+|... +.+|+|.++|.+......++.++|++|++. .+...|++
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 359999999999999999999999999999999999765 358999999987644344567999999974 33467999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCC
Q 000524 951 ESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1030 (1444)
Q Consensus 951 e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD 1030 (1444)
||+.+...... . ..+.++++++.++|.+..++.+ ..||||||||++|||+|+.+|++|+|||||+|||
T Consensus 91 e~l~~~~~~~~-----~--~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD 158 (205)
T cd03226 91 EELLLGLKELD-----A--GNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLD 158 (205)
T ss_pred HHHhhhhhhcC-----c--cHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCC
Confidence 99987543221 1 1235789999999998877764 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEE
Q 000524 1031 ARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1079 (1444)
Q Consensus 1031 ~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~ 1079 (1444)
+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 159 YKNMERVGELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 99999999999999777999999999986 57778999999986 6653
No 144
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2e-35 Score=328.79 Aligned_cols=206 Identities=25% Similarity=0.331 Sum_probs=173.9
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~ 67 (214)
T TIGR02673 2 IEFHNVSKAYP------------GGVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVN 67 (214)
T ss_pred EEEEeeeEEeC------------CCceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 46778877762 12369999999999999999999999999999999999865 34899999998764
Q ss_pred cc------cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000524 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 927 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1000 (1444)
.. .+++.++|++|++.+++.+|+.|++.+....+. ...+..++.++++++.++|.+..++.+ ..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 139 (214)
T TIGR02673 68 RLRGRQLPLLRRRIGVVFQDFRLLPDRTVYENVALPLEVRG---KKEREIQRRVGAALRQVGLEHKADAFP-----EQLS 139 (214)
T ss_pred cCCHHHHHHHHhheEEEecChhhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCC
Confidence 31 245678999999988889999999988754331 223334556889999999987766653 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecC
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1075 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~g 1075 (1444)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.||++++|++|
T Consensus 140 ~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 140 GGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 99999999999999999999999999999999999999999998777999999999986 677889999999864
No 145
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-35 Score=330.58 Aligned_cols=216 Identities=24% Similarity=0.316 Sum_probs=179.3
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++.. ...+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 6 l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i~ 74 (233)
T PRK11629 6 LQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPMS 74 (233)
T ss_pred EEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcC
Confidence 7889998877421 011469999999999999999999999999999999999865 35899999998764
Q ss_pred ccc------c-cceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000524 927 QET------F-ARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGL 999 (1444)
Q Consensus 927 ~~~------~-~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~l 999 (1444)
... . ++.++|++|+..+++.+|++|++.+....+ ....+..++.++++++.++|.+..++. +..|
T Consensus 75 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~L 146 (233)
T PRK11629 75 KLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIG---KKKPAEINSRALEMLAAVGLEHRANHR-----PSEL 146 (233)
T ss_pred cCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----hhhC
Confidence 321 1 256899999998889999999998865432 122334455688999999998776665 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcceEEEEecCcEE
Q 000524 1000 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1078 (1444)
Q Consensus 1000 SgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~ 1078 (1444)
|||||||++||++|+.+|+||+|||||+|||+.+...+.+.|+++++ +|+|||+++|++. ++ +.+|++++|++ |++
T Consensus 147 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~-~~~~~~~~l~~-G~i 223 (233)
T PRK11629 147 SGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LA-KRMSRQLEMRD-GRL 223 (233)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HH-HhhCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999875 5899999999985 34 45689999985 899
Q ss_pred EEEcCC
Q 000524 1079 IYVGPL 1084 (1444)
Q Consensus 1079 ~y~G~~ 1084 (1444)
+..|++
T Consensus 224 ~~~~~~ 229 (233)
T PRK11629 224 TAELSL 229 (233)
T ss_pred EEEecc
Confidence 998886
No 146
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3.2e-35 Score=335.15 Aligned_cols=214 Identities=27% Similarity=0.362 Sum_probs=180.6
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKFH-------------GQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQP--EAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEEC-------------CeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEcc
Confidence 67888887763 23599999999999999999999999999999999998653 4799999998753
Q ss_pred c-----------ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000524 927 Q-----------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPG 995 (1444)
Q Consensus 927 ~-----------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 995 (1444)
. ...++.++|++|++.+++..|++|++.+...... ....+...+.++++++.++|.+..++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~----- 141 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVK--GEPKEEATARARELLAKVGLAGKETSY----- 141 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhCC-----
Confidence 2 1235578999999988889999999987543211 123334455688999999998776665
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecC
Q 000524 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1075 (1444)
Q Consensus 996 ~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~g 1075 (1444)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++
T Consensus 142 ~~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~- 219 (250)
T PRK11264 142 PRRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ- 219 (250)
T ss_pred hhhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-
Confidence 4579999999999999999999999999999999999999999999999877999999999986 57788999999986
Q ss_pred cEEEEEcCC
Q 000524 1076 GQEIYVGPL 1084 (1444)
Q Consensus 1076 g~~~y~G~~ 1084 (1444)
|++++.|+.
T Consensus 220 G~i~~~~~~ 228 (250)
T PRK11264 220 GRIVEQGPA 228 (250)
T ss_pred CEEEEeCCH
Confidence 799998875
No 147
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.1e-35 Score=330.18 Aligned_cols=214 Identities=26% Similarity=0.393 Sum_probs=179.3
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++. +.+.+|+|+|+++++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~~-----------~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (220)
T cd03263 1 LQIRNLTKTYKK-----------GTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIR 67 (220)
T ss_pred CEEEeeEEEeCC-----------CCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 356777776631 11469999999999999999999999999999999999865 35899999998764
Q ss_pred c--ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 927 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 927 ~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
. ..+++.++|++|++.+++.+|++|++.+....+. ...+...+.++++++.++|.+..++.+ ..||+|||
T Consensus 68 ~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 139 (220)
T cd03263 68 TDRKAARQSLGYCPQFDALFDELTVREHLRFYARLKG---LPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMK 139 (220)
T ss_pred cchHHHhhhEEEecCcCCccccCCHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHH
Confidence 3 2345678999999988889999999988654432 223333456889999999988777653 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 140 qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 140 RKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 999999999999999999999999999999999999999875 699999999986 57788999999986 799988875
No 148
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-35 Score=341.24 Aligned_cols=218 Identities=20% Similarity=0.293 Sum_probs=180.5
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++++|+++.++... ...+.+|+|||++|++||++||+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEGT--------PFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKP--TSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCCC--------ccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CccEEEECCEECC
Confidence 67888888774210 0123699999999999999999999999999999999998653 4899999998865
Q ss_pred c-----ccccceEEEEecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc--ccccccccCCCCCc
Q 000524 927 Q-----ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK--PLIQSLVGLPGVSG 998 (1444)
Q Consensus 927 ~-----~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~--~~~~~~vg~~~~~~ 998 (1444)
. ...++.+||++|++. .....||+|++.|..... ..+.++..+.++++++.+||. +..++. ++.
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~ 144 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINL---GLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFE 144 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHC---CCCHHHHHHHHHHHHHHcCCCchhhccCC-----ccc
Confidence 3 134567999999863 233579999998865432 234455556789999999997 555554 467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 999 lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
||||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++.+.||++++|++ |+
T Consensus 145 LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~ 222 (287)
T PRK13637 145 LSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GK 222 (287)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999985 57788999999986 89
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13637 223 CELQGTP 229 (287)
T ss_pred EEEECCH
Confidence 9999975
No 149
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.5e-36 Score=311.61 Aligned_cols=210 Identities=23% Similarity=0.379 Sum_probs=181.0
Q ss_pred ccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCcc----ceEEEEcCCCCCC
Q 000524 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE----RTAAYISQHDNHI 238 (1444)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 238 (1444)
+++++++|||+.+++||+++++|||||||||...++.|+..|+ +|+|.++|.+++.+... .-+||+||++..|
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 4567999999999999999999999999999999999999998 99999999999887553 3589999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
..+||+|||.-..+.+....+ ..+.+.+.+.+|+.|+|.|+++..-
T Consensus 92 r~LtV~dNi~~vlE~~~~d~~--------------------------------~~~~~~~l~~LL~ef~i~hlr~~~a-- 137 (243)
T COG1137 92 RKLTVEDNIMAVLEIREKDLK--------------------------------KAERKEELDALLEEFHITHLRDSKA-- 137 (243)
T ss_pred hcCcHHHHHHHHHhhhhcchh--------------------------------HHHHHHHHHHHHHHhchHHHhcCcc--
Confidence 999999999876654321000 0112345788999999999998654
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
-.||||||+|+.|||||+.+|+.++||||++|+||-+..+|.+.++.+.. . +.-|+..-|+..|+.+++||.+++
T Consensus 138 ---~sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~-r-giGvLITDHNVREtL~i~dRaYIi 212 (243)
T COG1137 138 ---YSLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD-R-GIGVLITDHNVRETLDICDRAYII 212 (243)
T ss_pred ---cccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh-C-CceEEEccccHHHHHhhhheEEEE
Confidence 36999999999999999999999999999999999999999999999865 3 444555678889999999999999
Q ss_pred cCCeEEEecChhhHHH
Q 000524 399 SDGQIVYQGPRELVLE 414 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1444)
++|++..+|+++++.+
T Consensus 213 ~~G~vla~G~p~ei~~ 228 (243)
T COG1137 213 SDGKVLAEGSPEEIVN 228 (243)
T ss_pred ecCeEEecCCHHHHhc
Confidence 9999999999998864
No 150
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-35 Score=338.66 Aligned_cols=203 Identities=25% Similarity=0.299 Sum_probs=173.7
Q ss_pred CceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc---c----ccceEEEEecCCC
Q 000524 870 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE---T----FARISGYCEQNDI 942 (1444)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~q~~~ 942 (1444)
+.+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.... . .++.++|++|++.
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 446799999999999999999999999999999999998653 479999999875421 1 1356899999999
Q ss_pred CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEE
Q 000524 943 HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1022 (1444)
Q Consensus 943 ~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illL 1022 (1444)
+++.+||+|++.+...... .......+.++++++.++|.+..++.+ ..||||||||++||++|+.+|+||+|
T Consensus 113 ~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illL 184 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQG---VPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLM 184 (269)
T ss_pred cCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 8889999999988654321 223344456889999999988777764 57999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1023 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1023 DEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 185 DEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 185 DEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred cCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999998754 899999999986 57888999999985 799998875
No 151
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-35 Score=333.53 Aligned_cols=213 Identities=27% Similarity=0.372 Sum_probs=179.2
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
.++|+++.++. .+.+|+|+|+.|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 67 (242)
T cd03295 2 EFENVTKRYGG------------GKKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEP--TSGEIFIDGEDIRE 67 (242)
T ss_pred EEEEEEEEeCC------------cceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCeEcCc
Confidence 46777776631 13599999999999999999999999999999999998653 47999999987543
Q ss_pred ---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc--cccccccCCCCCcCCHH
Q 000524 928 ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP--LIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 928 ---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~--~~~~~vg~~~~~~lSgG 1002 (1444)
...++.++|++|++.+++.+||+||+.+....+. .+.+...+.+.++++.++|.+ ..++. ++.||||
T Consensus 68 ~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G 139 (242)
T cd03295 68 QDPVELRRKIGYVIQQIGLFPHMTVEENIALVPKLLK---WPKEKIRERADELLALVGLDPAEFADRY-----PHELSGG 139 (242)
T ss_pred CChHHhhcceEEEccCccccCCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHH
Confidence 2345678999999999999999999988654431 233444556889999999985 55554 4679999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEE
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1081 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~ 1081 (1444)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 140 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 217 (242)
T cd03295 140 QQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQV 217 (242)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999765 899999999986 57888999999986 799998
Q ss_pred cCC
Q 000524 1082 GPL 1084 (1444)
Q Consensus 1082 G~~ 1084 (1444)
|+.
T Consensus 218 ~~~ 220 (242)
T cd03295 218 GTP 220 (242)
T ss_pred cCH
Confidence 875
No 152
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.8e-35 Score=327.67 Aligned_cols=206 Identities=25% Similarity=0.354 Sum_probs=173.3
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
.++|+++.++ +.+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++..
T Consensus 2 ~~~~l~~~~~------------~~~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~ 67 (214)
T cd03292 2 EFINVTKTYP------------NGTAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSD 67 (214)
T ss_pred EEEEEEEEeC------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEccc
Confidence 4677777663 12369999999999999999999999999999999999765 348999999987542
Q ss_pred c------cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000524 928 E------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 928 ~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1001 (1444)
. .+++.++|++|++.+++.+|++|++.+....+. ...+..++.++++++.++|.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 139 (214)
T cd03292 68 LRGRAIPYLRRKIGVVFQDFRLLPDRNVYENVAFALEVTG---VPPREIRKRVPAALELVGLSHKHRALP-----AELSG 139 (214)
T ss_pred CCHHHHHHHHHheEEEecCchhccCCcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCH
Confidence 1 245679999999999999999999988754432 223344556889999999988777653 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
|||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |+
T Consensus 140 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 140 GEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999999999999999999999999999999777999999999985 57778999999986 44
No 153
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=2.2e-35 Score=347.64 Aligned_cols=206 Identities=25% Similarity=0.372 Sum_probs=176.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1444)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 45999999999999999999999999999999999999998 999999999876432 2467999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 131 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~~~----- 171 (340)
T PRK13536 131 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADARVS----- 171 (340)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhCCChh-----
Confidence 9999997654432100 0011234667889999988887765
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
+|||||||||+||+||+++|++++|||||+|||+.++.++.+.|+++.. . +++|+.++|..+++.++||+|++|++|+
T Consensus 172 ~LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~-g~tilisSH~l~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 172 DLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLEAGR 249 (340)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999864 3 4455567888999999999999999999
Q ss_pred EEEecChhhHHH
Q 000524 403 IVYQGPRELVLE 414 (1444)
Q Consensus 403 iv~~G~~~~~~~ 414 (1444)
++++|+.+++.+
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999998864
No 154
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.7e-35 Score=329.81 Aligned_cols=210 Identities=28% Similarity=0.405 Sum_probs=175.0
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
+++|+++.++ ++.+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 66 (222)
T cd03224 2 EVENLNAGYG-------------KSQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPP--RSGSIRFDGRDITG 66 (222)
T ss_pred EEeeEEeecC-------------CeeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEcCC
Confidence 5677776652 24699999999999999999999999999999999998653 47999999987543
Q ss_pred c---c-ccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCcCCHH
Q 000524 928 E---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELV-ELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 928 ~---~-~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
. . .++.++|++|++.+++.+|++|++.+....+. .......+.++++.+ ++.+..++. +..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G 136 (222)
T cd03224 67 LPPHERARAGIGYVPEGRRIFPELTVEENLLLGAYARR-----RAKRKARLERVYELFPRLKERRKQL-----AGTLSGG 136 (222)
T ss_pred CCHHHHHhcCeEEeccccccCCCCcHHHHHHHHhhhcC-----chhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHH
Confidence 2 1 24568999999999999999999988654331 122334567788887 576666655 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 137 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 214 (222)
T cd03224 137 EQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEG 214 (222)
T ss_pred HHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeC
Confidence 999999999999999999999999999999999999999999877899999999986 57888999999985 7999888
Q ss_pred CC
Q 000524 1083 PL 1084 (1444)
Q Consensus 1083 ~~ 1084 (1444)
+.
T Consensus 215 ~~ 216 (222)
T cd03224 215 TA 216 (222)
T ss_pred CH
Confidence 74
No 155
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-35 Score=328.08 Aligned_cols=200 Identities=29% Similarity=0.420 Sum_probs=167.3
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1444)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 45999999999999999999999999999999999999987 9999999998764332 4579999999988999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
+||+.++....+... .+....++.+++.+||++..++.+ ..
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (213)
T cd03259 90 AENIAFGLKLRGVPK----------------------------------AEIRARVRELLELVGLEGLLNRYP-----HE 130 (213)
T ss_pred HHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhcCh-----hh
Confidence 999988643221000 001123566788999987766555 46
Q ss_pred cchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000524 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1444)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|+|++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELG-ITTIYVTHDQEEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998865334 4555578888889999999999999999
Q ss_pred EEec
Q 000524 404 VYQG 407 (1444)
Q Consensus 404 v~~G 407 (1444)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 156
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-35 Score=332.65 Aligned_cols=212 Identities=26% Similarity=0.338 Sum_probs=178.8
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 66 (255)
T PRK11248 2 LQISHLYADYG-------------GKPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPY--QHGSITLDGKPVE 66 (255)
T ss_pred EEEEEEEEEeC-------------CeeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 46778877663 24699999999999999999999999999999999998653 4799999998764
Q ss_pred cccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000524 927 QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 1006 (1444)
Q Consensus 927 ~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkR 1006 (1444)
. ..+.++|++|++.+++.+||+|++.+....+. ....+..+.++++++.++|.+..++. +..||||||||
T Consensus 67 ~--~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qr 136 (255)
T PRK11248 67 G--PGAERGVVFQNEGLLPWRNVQDNVAFGLQLAG---VEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQR 136 (255)
T ss_pred C--CCCcEEEEeCCCccCCCCcHHHHHHhHHHHcC---CCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHH
Confidence 3 23457999999988888999999987644321 23334455689999999998776665 35799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcceEEEEec-CcEEEEEcCC
Q 000524 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKR-GGQEIYVGPL 1084 (1444)
Q Consensus 1007 l~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~t~Hqps~~i~~~fD~v~ll~~-gg~~~y~G~~ 1084 (1444)
++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|++. ++.+.||++++|++ +|+++..++.
T Consensus 137 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 137 VGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 9999999999999999999999999999999999999854 5899999999986 67889999999985 5899888765
No 157
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-35 Score=330.07 Aligned_cols=205 Identities=27% Similarity=0.367 Sum_probs=172.1
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc------cceEEEEcCCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHIG 239 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 239 (1444)
++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999987 9999999998765321 357999999999999
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000524 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1444)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1444)
.+|++||+.+.....+... .+....++.+++.+||++..+..+
T Consensus 96 ~~t~~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~--- 138 (233)
T cd03258 96 SRTVFENVALPLEIAGVPK----------------------------------AEIEERVLELLELVGLEDKADAYP--- 138 (233)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhcCh---
Confidence 9999999988654321100 001123567889999987766544
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|++++|+
T Consensus 139 --~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tvii~sH~~~~~~~~~d~i~~l~ 215 (233)
T cd03258 139 --AQLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELG-LTIVLITHEMEVVKRICDRVAVME 215 (233)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhCCEEEEEE
Confidence 47999999999999999999999999999999999999999999998765334 455557777888899999999999
Q ss_pred CCeEEEecChhhHH
Q 000524 400 DGQIVYQGPRELVL 413 (1444)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1444)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999887653
No 158
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.9e-35 Score=335.57 Aligned_cols=217 Identities=25% Similarity=0.281 Sum_probs=177.6
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+. .++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (243)
T TIGR02315 2 LEVENLSKVYP------------NGKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEP--SSGSILLEGTDIT 67 (243)
T ss_pred eEEEeeeeecC------------CCcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CccEEEECCEEhh
Confidence 45777776653 023599999999999999999999999999999999998653 4899999998754
Q ss_pred c------ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000524 927 Q------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRL-----PPEVDSETRKMFIEEVMELVELKPLIQSLVGLPG 995 (1444)
Q Consensus 927 ~------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~-----~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 995 (1444)
. ..+++.++|++|++.+++.+||+|++.+...... .........++.++++++.++|.+..+..
T Consensus 68 ~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~----- 142 (243)
T TIGR02315 68 KLRGKKLRKLRRRIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR----- 142 (243)
T ss_pred hCCHHHHHHHHhheEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----
Confidence 2 1245679999999988899999999976421100 00111223345688999999998776665
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 996 ~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
+..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++ |+|||+++|++. ++.+.||++++|++
T Consensus 143 ~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~ 221 (243)
T TIGR02315 143 ADQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA 221 (243)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC
Confidence 3579999999999999999999999999999999999999999999998764 899999999986 57788999999986
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|++++.|+.
T Consensus 222 -G~i~~~~~~ 230 (243)
T TIGR02315 222 -GEIVFDGAP 230 (243)
T ss_pred -CEEEecCCH
Confidence 789988875
No 159
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-35 Score=337.08 Aligned_cols=214 Identities=24% Similarity=0.326 Sum_probs=180.3
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++++|+++.++. ...+|+|+|+++++||++||+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~~------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 70 (274)
T PRK13647 5 IEVEDLHFRYKD------------GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLP--QRGRVKVMGREVN 70 (274)
T ss_pred EEEEEEEEEeCC------------CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CceEEEECCEECC
Confidence 778898887631 23599999999999999999999999999999999997653 4899999998764
Q ss_pred c---ccccceEEEEecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 927 Q---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 927 ~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
. ...++.+||++|++. .++..||.|++.|..... ....+...+.++++++.++|.+..++.+ ..||||
T Consensus 71 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgG 142 (274)
T PRK13647 71 AENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNM---GLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSYG 142 (274)
T ss_pred CCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCHH
Confidence 3 223467999999863 345689999998864322 2333444556889999999988777764 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 143 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 220 (274)
T PRK13647 143 QKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAEG 220 (274)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999999877999999999986 57788999999985 7999999
Q ss_pred CC
Q 000524 1083 PL 1084 (1444)
Q Consensus 1083 ~~ 1084 (1444)
+.
T Consensus 221 ~~ 222 (274)
T PRK13647 221 DK 222 (274)
T ss_pred CH
Confidence 85
No 160
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=6.2e-35 Score=335.72 Aligned_cols=215 Identities=20% Similarity=0.298 Sum_probs=181.3
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|+++.++ ++.+|+|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTRG-------------NRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAP--DHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEEc
Confidence 378899988763 24699999999999999999999999999999999998653 489999999875
Q ss_pred Ccc------cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000524 926 KQE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGL 999 (1444)
Q Consensus 926 ~~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~l 999 (1444)
... ..++.++|++|+..+++.+||.|++.+...... ..+.+..++.+.++++.++|.+..+..+ ..|
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 144 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHT--QLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SEL 144 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 421 134568999999988899999999987543221 1223334456788999999988777653 579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEE
Q 000524 1000 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1078 (1444)
Q Consensus 1000 SgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~ 1078 (1444)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++
T Consensus 145 SgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 222 (269)
T PRK11831 145 SGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKI 222 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999998765 899999999985 57888999999985 899
Q ss_pred EEEcCC
Q 000524 1079 IYVGPL 1084 (1444)
Q Consensus 1079 ~y~G~~ 1084 (1444)
++.|+.
T Consensus 223 ~~~g~~ 228 (269)
T PRK11831 223 VAHGSA 228 (269)
T ss_pred EEeCCH
Confidence 999875
No 161
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-35 Score=328.21 Aligned_cols=205 Identities=29% Similarity=0.370 Sum_probs=172.0
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1444)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 45999999999999999999999999999999999999987 999999998765321 2357999999998999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+||+.+..+..+... .+....++.+++.+||++..++.++
T Consensus 90 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~----- 130 (220)
T cd03265 90 GWENLYIHARLYGVPG----------------------------------AERRERIDELLDFVGLLEAADRLVK----- 130 (220)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCChh-----
Confidence 9999998654322100 0011245678999999877776554
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+..+ ++|+.++|+.+++.+.+|++++|++|+
T Consensus 131 ~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tvi~~tH~~~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 131 TYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFG-MTILLTTHYMEEAEQLCDRVAIIDHGR 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCE
Confidence 6999999999999999999999999999999999999999999999865334 455668888889999999999999999
Q ss_pred EEEecChhhH
Q 000524 403 IVYQGPRELV 412 (1444)
Q Consensus 403 iv~~G~~~~~ 412 (1444)
+++.|+.+++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03265 210 IIAEGTPEEL 219 (220)
T ss_pred EEEeCChHHc
Confidence 9999987653
No 162
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-35 Score=339.96 Aligned_cols=218 Identities=25% Similarity=0.306 Sum_probs=179.8
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++++|+++.++... .....+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQP--TSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67889988874211 0113599999999999999999999999999999999998653 4899999998763
Q ss_pred c-------ccccceEEEEecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000524 927 Q-------ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 997 (1444)
Q Consensus 927 ~-------~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1444)
. ..+++.+|||+|++. .+...||+||+.|..... ..+.++..+.++++++.++|. +..++. +.
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNF---GVSEEDAKQKAREMIELVGLPEELLARS-----PF 144 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCChhhhhCC-----cc
Confidence 2 234567999999863 233479999998875432 223444455789999999997 555654 46
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G 222 (290)
T PRK13634 145 ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-G 222 (290)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999986 68889999999985 8
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (290)
T PRK13634 223 TVFLQGTP 230 (290)
T ss_pred EEEEECCH
Confidence 99999975
No 163
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-35 Score=306.36 Aligned_cols=207 Identities=30% Similarity=0.446 Sum_probs=174.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCcc---ceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE---RTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~l 241 (1444)
+.+|++||++++||||++|+||||||||||||+|+|.+.|+ +|++++||++++++.+. +.-+..+|+..+-+..
T Consensus 14 r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpF 90 (259)
T COG4559 14 RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPF 90 (259)
T ss_pred ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccce
Confidence 45899999999999999999999999999999999999998 99999999999988764 5668999998887778
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
||+|-+.++..-.+.+.. |. +...+++..|...++.+.+. +..
T Consensus 91 tv~eVV~mGr~p~~~g~~-----------------~~---------------e~~~i~~~ala~~d~~~la~-----R~y 133 (259)
T COG4559 91 TVQEVVQMGRIPHRSGRE-----------------PE---------------EDERIAAQALAATDLSGLAG-----RDY 133 (259)
T ss_pred EHHHHHHhcccccccCCC-----------------ch---------------hhHHHHHHHHHHcChhhhhc-----cch
Confidence 999999998653321110 00 11234566777888877665 334
Q ss_pred cccchhhhhHHHHHHHHhc------CCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeE
Q 000524 322 RGISGGERKRVTTGEMMVG------PALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~------~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1444)
+.|||||||||.+||.|+. ++++||||||||+||......+++..|++++. + ..|+.++|+..-+..++|+|
T Consensus 134 ~~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g-~~V~~VLHDLNLAA~YaDri 211 (259)
T COG4559 134 RTLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-G-GAVLAVLHDLNLAAQYADRI 211 (259)
T ss_pred hhcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-C-CcEEEEEccchHHHHhhhee
Confidence 6799999999999999975 44689999999999999999999999999974 3 55666889999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000524 396 ILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1444)
++|.+||++..|++++++
T Consensus 212 vll~~Grv~a~g~p~~vl 229 (259)
T COG4559 212 VLLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeeCCeEeecCCHHHhc
Confidence 999999999999998876
No 164
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-35 Score=336.29 Aligned_cols=208 Identities=25% Similarity=0.336 Sum_probs=174.4
Q ss_pred ccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-------cceEEEEcCCC
Q 000524 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHD 235 (1444)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d 235 (1444)
..+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 35 ~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~ 111 (269)
T cd03294 35 GQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSF 111 (269)
T ss_pred CCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCc
Confidence 3457999999999999999999999999999999999999987 9999999998764321 24699999999
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccc
Q 000524 236 NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTM 315 (1444)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1444)
.+++.+||+||+.+.....+... .+....++++++.+||++..++.
T Consensus 112 ~~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~ 157 (269)
T cd03294 112 ALLPHRTVLENVAFGLEVQGVPR----------------------------------AEREERAAEALELVGLEGWEHKY 157 (269)
T ss_pred ccCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCC
Confidence 89999999999998654321100 00112356788999998777766
Q ss_pred ccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeE
Q 000524 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1444)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1444)
++ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|++
T Consensus 158 ~~-----~LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tiii~tH~~~~~~~~~d~v 231 (269)
T cd03294 158 PD-----ELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQ-KTIVFITHDLDEALRLGDRI 231 (269)
T ss_pred cc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhcCEE
Confidence 54 6999999999999999999999999999999999999999999999865334 45555778888899999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000524 396 ILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1444)
++|++|++++.|+.+++.
T Consensus 232 ~~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 232 AIMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEEECCEEEEeCCHHHHH
Confidence 999999999999988764
No 165
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-35 Score=324.56 Aligned_cols=208 Identities=32% Similarity=0.473 Sum_probs=175.0
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
.++|+++.++ +..+|+|+|+++++| +++|+||||||||||+++|+|...+ .+|+|.++|.++..
T Consensus 2 ~~~~~~~~~~-------------~~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~~ 65 (211)
T cd03264 2 QLENLTKRYG-------------KKRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPP--SSGTIRIDGQDVLK 65 (211)
T ss_pred EEEEEEEEEC-------------CEEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCCcccc
Confidence 5677776653 236999999999999 9999999999999999999997653 48999999987543
Q ss_pred c--cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000524 928 E--TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 1005 (1444)
Q Consensus 928 ~--~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1005 (1444)
. ..++.++|++|++.+++.+||.|++.+....+. ...++..+.++++++.++|.+..++.+ ..|||||||
T Consensus 66 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 137 (211)
T cd03264 66 QPQKLRRRIGYLPQEFGVYPNFTVREFLDYIAWLKG---IPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRR 137 (211)
T ss_pred chHHHHhheEEecCCCcccccCCHHHHHHHHHHHhC---CCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHH
Confidence 2 245678999999999999999999988655432 222333456889999999988777653 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1006 Rl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 138 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 138 RVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999999976 599999999986 47778999999986 7887654
No 166
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-35 Score=341.92 Aligned_cols=218 Identities=24% Similarity=0.347 Sum_probs=180.2
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|+++.++... .....+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p--~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEKQ--------ENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKS--KYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCEEc
Confidence 489999998885210 0123599999999999999999999999999999999998653 489999999775
Q ss_pred Cc-------------------ccccceEEEEecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc
Q 000524 926 KQ-------------------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK 984 (1444)
Q Consensus 926 ~~-------------------~~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~ 984 (1444)
.. ..+++.+|||+|++ .+++ .||+||+.|..... ..+.++..+++.++++.++|.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~ 166 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVAL---GVKKSEAKKLAKFYLNKMGLD 166 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCC
Confidence 32 13457799999986 3454 59999998864322 223444455788999999996
Q ss_pred -ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHH
Q 000524 985 -PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIF 1063 (1444)
Q Consensus 985 -~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~ 1063 (1444)
+..+.. +..||||||||++|||+|+.+|+||+|||||+|||+.++..+++.|+++.++|+|||+++|+++ ++.
T Consensus 167 ~~~~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~ 240 (320)
T PRK13631 167 DSYLERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVL 240 (320)
T ss_pred hhHhcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHH
Confidence 455544 4679999999999999999999999999999999999999999999999877999999999986 577
Q ss_pred HhcceEEEEecCcEEEEEcCC
Q 000524 1064 DAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1064 ~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
+.+|++++|++ |++++.|+.
T Consensus 241 ~~adri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 241 EVADEVIVMDK-GKILKTGTP 260 (320)
T ss_pred HhCCEEEEEEC-CEEEEeCCH
Confidence 88999999986 899999985
No 167
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=8.3e-35 Score=325.67 Aligned_cols=208 Identities=24% Similarity=0.316 Sum_probs=174.6
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++ +++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~ 67 (222)
T PRK10908 2 IRFEHVSKAYL------------GGRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDIT 67 (222)
T ss_pred EEEEeeEEEec------------CCCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcc
Confidence 56788877762 12369999999999999999999999999999999999865 34899999998754
Q ss_pred cc------cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000524 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 927 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1000 (1444)
.. .+++.++|++|++.+++..|++|++.+....+ ....++..+.++++++.+++.+..++. +..||
T Consensus 68 ~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 139 (222)
T PRK10908 68 RLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAIPLIIA---GASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLS 139 (222)
T ss_pred cCChhHHHHHHhheEEEecCccccccccHHHHHHhHHHhc---CCCHHHHHHHHHHHHHHcCChhhhhCC-----chhCC
Confidence 21 13567899999998888899999998865443 123334445678899999998876665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEE
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1078 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~ 1078 (1444)
||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++ |++
T Consensus 140 ~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i 215 (222)
T PRK10908 140 GGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHL 215 (222)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999777899999999986 57778999999986 564
No 168
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-35 Score=338.81 Aligned_cols=218 Identities=25% Similarity=0.388 Sum_probs=176.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC-----ccceEEEEcCCCC-CC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDN-HI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 238 (1444)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999997 999999999886532 2467999999863 44
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc--ccccccc
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE--VCADTMV 316 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~--~~~dt~v 316 (1444)
..+||+||+.|+....+.. + .+....++++++.+||+ +..|+.
T Consensus 97 ~~~tv~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gL~~~~~~~~~- 141 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS-E---------------------------------EEIENRVKRAMNIVGLDYEDYKDKS- 141 (287)
T ss_pred ccccHHHHHHhHHHHCCCC-H---------------------------------HHHHHHHHHHHHHcCCCchhhccCC-
Confidence 5689999999865332110 0 01123467789999996 445544
Q ss_pred cCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEE
Q 000524 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1444)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1444)
++.||||||||++||+||+.+|++|+|||||+|||+.++.++.+.|+++++. .+++|+.++|+..++.++||+|+
T Consensus 142 ----~~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~-~g~tvi~vtHd~~~~~~~~drv~ 216 (287)
T PRK13637 142 ----PFELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKE-YNMTIILVSHSMEDVAKLADRII 216 (287)
T ss_pred ----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHh-cCCEEEEEeCCHHHHHHhCCEEE
Confidence 4579999999999999999999999999999999999999999999998653 34556667888889999999999
Q ss_pred EEcCCeEEEecChhhHHH---HHHhcCCCCCC
Q 000524 397 LLSDGQIVYQGPRELVLE---FFESMGFKCPK 425 (1444)
Q Consensus 397 lL~~G~iv~~G~~~~~~~---~F~~~Gf~cp~ 425 (1444)
+|++|+++++|+.+++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988743 23344555443
No 169
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-35 Score=338.14 Aligned_cols=217 Identities=26% Similarity=0.351 Sum_probs=180.0
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPNS--------PFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQP--TEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCCC--------cccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 57889988874210 0113599999999999999999999999999999999998653 4899999998863
Q ss_pred c-------ccccceEEEEecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000524 927 Q-------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGV 996 (1444)
Q Consensus 927 ~-------~~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 996 (1444)
. ..+++.+||++|++ .+++ .||.|++.|..... ..+.++.++.+.++++.++|. +..+.. +
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~ 142 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLFE-ETVLKDVAFGPQNF---GIPKEKAEKIAAEKLEMVGLADEFWEKS-----P 142 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhccc-chHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCChhhccCC-----c
Confidence 1 13456799999986 3444 69999999875432 233455566789999999996 455554 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.||++++|++ |
T Consensus 143 ~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G 220 (288)
T PRK13643 143 FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-G 220 (288)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-C
Confidence 679999999999999999999999999999999999999999999999877999999999985 57788999999985 8
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
++++.|+.
T Consensus 221 ~i~~~g~~ 228 (288)
T PRK13643 221 HIISCGTP 228 (288)
T ss_pred EEEEECCH
Confidence 99999986
No 170
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-35 Score=330.59 Aligned_cols=214 Identities=27% Similarity=0.360 Sum_probs=180.6
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (241)
T PRK10895 4 LTAKNLAKAYK-------------GRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPR--DAGNIIIDDEDIS 68 (241)
T ss_pred EEEeCcEEEeC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 67788877663 24699999999999999999999999999999999998653 4899999998764
Q ss_pred cc----cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 927 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 927 ~~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
.. ..++.++|++|++..++.+||.||+.+...++. ..+.++.+..++++++.+++.+..+.. .+.||||
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 141 (241)
T PRK10895 69 LLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVLQIRD--DLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGG 141 (241)
T ss_pred CCCHHHHHHhCeEEeccCCcccccCcHHHHHhhhhhccc--ccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHH
Confidence 31 134578999999988888999999987643321 122334456688999999998766654 4579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
||||++||++|+.+|++|+|||||+|||+.++..+.+.++++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 142 ~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~ 219 (241)
T PRK10895 142 ERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHG 219 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeC
Confidence 999999999999999999999999999999999999999998877999999999985 68889999999985 7999988
Q ss_pred CC
Q 000524 1083 PL 1084 (1444)
Q Consensus 1083 ~~ 1084 (1444)
+.
T Consensus 220 ~~ 221 (241)
T PRK10895 220 TP 221 (241)
T ss_pred CH
Confidence 75
No 171
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=6.7e-35 Score=327.99 Aligned_cols=217 Identities=24% Similarity=0.294 Sum_probs=172.8
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+... .....+|+|+|+++++||++||+|||||||||||++|+|... +.+|+|.++|.++.
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (228)
T cd03257 2 LEVKNLSVSFPTG---------GGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLL 70 (228)
T ss_pred eEEEeeeEeccCC---------CcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcc
Confidence 5678887776310 001269999999999999999999999999999999999865 34899999998764
Q ss_pred c------ccccceEEEEecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000524 927 Q------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 997 (1444)
Q Consensus 927 ~------~~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1444)
. ..+++.++|++|++ .+.+.+||+||+.+......+. ...+..+..++++++.+++. +..+.. +.
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 144 (228)
T cd03257 71 KLSRRLRKIRRKEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKL-SKKEARKEAVLLLLVGVGLPEEVLNRY-----PH 144 (228)
T ss_pred ccchhhHHHhhccEEEEecCchhhcCCcCCHHHHHHHHHHhccCC-cHHHHHHHHHHHHHHHCCCChhHhhCC-----ch
Confidence 3 23456799999998 4567899999998765443211 11111122236889999995 455554 35
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G 222 (228)
T cd03257 145 ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-G 222 (228)
T ss_pred hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999876 899999999986 57778999999985 7
Q ss_pred EEEEEc
Q 000524 1077 QEIYVG 1082 (1444)
Q Consensus 1077 ~~~y~G 1082 (1444)
+++..|
T Consensus 223 ~i~~~g 228 (228)
T cd03257 223 KIVEEG 228 (228)
T ss_pred EEEecC
Confidence 877654
No 172
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-35 Score=330.72 Aligned_cols=210 Identities=29% Similarity=0.400 Sum_probs=172.3
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1444)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 35999999999999999999999999999999999999887 9999999998764432 3579999999988989999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
+||+.++....+...+ + +. .+....++.+++.+||++..++.+ ..
T Consensus 92 ~e~l~~~~~~~~~~~~-----------------~--~~-----------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (239)
T cd03296 92 FDNVAFGLRVKPRSER-----------------P--PE-----------AEIRAKVHELLKLVQLDWLADRYP-----AQ 136 (239)
T ss_pred HHHHhhhhhhcccccc-----------------C--CH-----------HHHHHHHHHHHHHcCChhhhhcCh-----hh
Confidence 9999986543211000 0 00 001123567889999987666554 46
Q ss_pred cchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000524 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1444)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++...+.| |+.++|+..++.+.+|+|++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~t-vii~sH~~~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVT-TVFVTHDQEEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHhCCEEEEEECCeE
Confidence 99999999999999999999999999999999999999999999987533444 55577777888999999999999999
Q ss_pred EEecChhhHH
Q 000524 404 VYQGPRELVL 413 (1444)
Q Consensus 404 v~~G~~~~~~ 413 (1444)
++.|+.+++.
T Consensus 216 ~~~~~~~~~~ 225 (239)
T cd03296 216 EQVGTPDEVY 225 (239)
T ss_pred EEecCHHHHh
Confidence 9999987663
No 173
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=9.4e-35 Score=330.55 Aligned_cols=214 Identities=24% Similarity=0.322 Sum_probs=178.1
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISGY 923 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 923 (1444)
+.++|+++.++ +..+|+|+|++|++||+++|+|+||||||||+++|+|...+. ..+|+|.++|.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~ 68 (247)
T TIGR00972 2 IEIENLNLFYG-------------EKEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQ 68 (247)
T ss_pred EEEEEEEEEEC-------------CeeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCE
Confidence 56788887763 235999999999999999999999999999999999976532 12799999998
Q ss_pred cCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccCC
Q 000524 924 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK----PLIQSLVGLP 994 (1444)
Q Consensus 924 ~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~~ 994 (1444)
+... ...++.++|++|+..+++ .|++||+.+....+. ....++..+.++++++.++|. +..+..
T Consensus 69 ~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~---- 141 (247)
T TIGR00972 69 DIYDKKIDVVELRRRVGMVFQKPNPFP-MSIYDNIAYGPRLHG--IKDKKELDEIVEESLKKAALWDEVKDRLHDS---- 141 (247)
T ss_pred EccccccchHHHHhheEEEecCcccCC-CCHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCCcchhhHhhCC----
Confidence 7642 234567999999988888 999999988654431 122334455688999999997 444443
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
+..||||||||++||++|+.+|++|+|||||+|||+.+...+++.|+++++ ++|||+++|++. ++.+.+|++++|++
T Consensus 142 -~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~ 218 (247)
T TIGR00972 142 -ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD 218 (247)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC
Confidence 467999999999999999999999999999999999999999999999876 489999999986 57788999999996
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|++++.|+.
T Consensus 219 -G~i~~~~~~ 227 (247)
T TIGR00972 219 -GELVEYGPT 227 (247)
T ss_pred -CEEEEeCCH
Confidence 799999875
No 174
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=331.72 Aligned_cols=214 Identities=20% Similarity=0.272 Sum_probs=180.8
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|+++.++ .+.+|+|+|+.+++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~ 69 (257)
T PRK10619 5 KLNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKP--SEGSIVVNGQTI 69 (257)
T ss_pred cEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEc
Confidence 378899988763 24699999999999999999999999999999999998653 479999999865
Q ss_pred Cc----------------ccccceEEEEecCCCCCCCCcHHHHHHHHHH-hcCCCCCCHHHHHHHHHHHHHHcCCcccc-
Q 000524 926 KQ----------------ETFARISGYCEQNDIHSPFVTVYESLLYSAW-LRLPPEVDSETRKMFIEEVMELVELKPLI- 987 (1444)
Q Consensus 926 ~~----------------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~-lr~~~~~~~~~~~~~v~~~l~~l~L~~~~- 987 (1444)
.. ..+++.++|++|++.+++.+||+||+.+... .. .......++.+.++++.+|+.+..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~ 146 (257)
T PRK10619 70 NLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVL---GLSKQEARERAVKYLAKVGIDERAQ 146 (257)
T ss_pred ccccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhC---CCCHHHHHHHHHHHHHHcCCChhhh
Confidence 31 1235678999999999999999999987542 21 123344456788999999998753
Q ss_pred cccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcc
Q 000524 988 QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFD 1067 (1444)
Q Consensus 988 ~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD 1067 (1444)
+.. ...||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.||
T Consensus 147 ~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d 220 (257)
T PRK10619 147 GKY-----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSS 220 (257)
T ss_pred hCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcC
Confidence 443 4679999999999999999999999999999999999999999999999877999999999986 5777899
Q ss_pred eEEEEecCcEEEEEcCC
Q 000524 1068 ELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1068 ~v~ll~~gg~~~y~G~~ 1084 (1444)
++++|++ |++++.|+.
T Consensus 221 ~i~~l~~-G~i~~~~~~ 236 (257)
T PRK10619 221 HVIFLHQ-GKIEEEGAP 236 (257)
T ss_pred EEEEEEC-CEEEEeCCH
Confidence 9999986 799998875
No 175
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=6.3e-35 Score=324.63 Aligned_cols=206 Identities=24% Similarity=0.355 Sum_probs=173.3
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
.++|+++.++ ++.+|+++|+.+++||+++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (213)
T cd03262 2 EIKNLHKSFG-------------DFHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEP--DSGTIIIDGLKLTD 66 (213)
T ss_pred EEEEEEEEEC-------------CeEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEECCc
Confidence 5677777663 24699999999999999999999999999999999998653 48999999987632
Q ss_pred -----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 928 -----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 928 -----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
..+++.++|++|++.+++.+|++|++.+...... ....++..+.++++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 139 (213)
T cd03262 67 DKKNINELRQKVGMVFQQFNLFPHLTVLENITLAPIKVK--GMSKAEAEERALELLEKVGLADKADAYP-----AQLSGG 139 (213)
T ss_pred cchhHHHHHhcceEEecccccCCCCcHHHHHHhHHHHhc--CCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHH
Confidence 2345679999999998999999999987643111 1223344556889999999988777653 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |+
T Consensus 140 ~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 140 QQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 999999999999999999999999999999999999999999877899999999986 57788999999986 44
No 176
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-35 Score=339.11 Aligned_cols=218 Identities=23% Similarity=0.311 Sum_probs=179.7
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++... .....+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKKL--------PTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCCC--------CccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 67889988874210 0113599999999999999999999999999999999998654 4799999986531
Q ss_pred ---------------------------cccccceEEEEecCC-CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Q 000524 927 ---------------------------QETFARISGYCEQND-IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVM 978 (1444)
Q Consensus 927 ---------------------------~~~~~~~~gyv~q~~-~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l 978 (1444)
....++.+|||+|++ ..+...||+|++.|..... ..+.++..+++.+++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l 149 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSM---GVSKEEAKKRAAKYI 149 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHc---CCCHHHHHHHHHHHH
Confidence 112456799999985 2344579999998865432 234455566789999
Q ss_pred HHcCCc-ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecC
Q 000524 979 ELVELK-PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQ 1057 (1444)
Q Consensus 979 ~~l~L~-~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hq 1057 (1444)
+.+||. +..+.. +..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|+
T Consensus 150 ~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd 224 (305)
T PRK13651 150 ELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHD 224 (305)
T ss_pred HHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeC
Confidence 999996 566655 45799999999999999999999999999999999999999999999998779999999999
Q ss_pred CCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1058 PGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1058 ps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
+. ++.+.+|++++|++ |++++.|+.
T Consensus 225 ~~-~~~~~adrv~vl~~-G~i~~~g~~ 249 (305)
T PRK13651 225 LD-NVLEWTKRTIFFKD-GKIIKDGDT 249 (305)
T ss_pred HH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 85 57889999999985 799999986
No 177
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-35 Score=336.35 Aligned_cols=215 Identities=26% Similarity=0.379 Sum_probs=181.3
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
-+.++|+++.++ +++.+|+|||++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 478999998873 12359999999999999999999999999999999999865 3589999999876
Q ss_pred Cc-----ccccceEEEEecCCCC-CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000524 926 KQ-----ETFARISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGL 999 (1444)
Q Consensus 926 ~~-----~~~~~~~gyv~q~~~~-~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~l 999 (1444)
.. ..+++.+||++|++.. ....||+|++.+..... ..+.++..+.++++++.++|.+..++. .+.|
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~-----~~~L 142 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNL---KLPEDEVRKRVDNALKRTGIEHLKDKP-----THCL 142 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhhhhCC-----cccC
Confidence 31 2345679999999742 34579999998864322 223444456689999999998877766 4679
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEE
Q 000524 1000 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1078 (1444)
Q Consensus 1000 SgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~ 1078 (1444)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.||++++|++ |++
T Consensus 143 S~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i 220 (283)
T PRK13636 143 SFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRV 220 (283)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 899999999986 46778999999986 799
Q ss_pred EEEcCC
Q 000524 1079 IYVGPL 1084 (1444)
Q Consensus 1079 ~y~G~~ 1084 (1444)
++.|+.
T Consensus 221 ~~~g~~ 226 (283)
T PRK13636 221 ILQGNP 226 (283)
T ss_pred EEeCCH
Confidence 999986
No 178
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.5e-34 Score=326.65 Aligned_cols=212 Identities=26% Similarity=0.395 Sum_probs=177.0
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++ ++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~i~ 66 (236)
T TIGR03864 2 LEVAGLSFAYG-------------ARRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVA--QEGQISVAGHDLR 66 (236)
T ss_pred EEEEeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEcc
Confidence 45777777663 24699999999999999999999999999999999998653 4899999998754
Q ss_pred cc--cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 927 QE--TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 927 ~~--~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
.. ...+.++|++|++.+++.+|++|++.+.+..+ ....+...+.++++++.+||.+..++.+ ..||||||
T Consensus 67 ~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~ 138 (236)
T TIGR03864 67 RAPRAALARLGVVFQQPTLDLDLSVRQNLRYHAALH---GLSRAEARERIAALLARLGLAERADDKV-----RELNGGHR 138 (236)
T ss_pred cCChhhhhhEEEeCCCCCCcccCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHH
Confidence 31 22356899999998888999999998765433 1223334456889999999988776653 57999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||+++|++. ++ ..+|++++|++ |++++.|+
T Consensus 139 qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~i~~l~~-G~i~~~~~ 215 (236)
T TIGR03864 139 RRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EI-EADDRLVVLHR-GRVLADGA 215 (236)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hH-hhCCEEEEEeC-CeEEEeCC
Confidence 999999999999999999999999999999999999999975 5899999999986 35 45999999985 78998887
Q ss_pred C
Q 000524 1084 L 1084 (1444)
Q Consensus 1084 ~ 1084 (1444)
.
T Consensus 216 ~ 216 (236)
T TIGR03864 216 A 216 (236)
T ss_pred H
Confidence 5
No 179
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=4.6e-35 Score=325.63 Aligned_cols=199 Identities=26% Similarity=0.420 Sum_probs=164.4
Q ss_pred eEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEEecCCCCC--CCCcH
Q 000524 872 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHS--PFVTV 949 (1444)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~--~~lTv 949 (1444)
+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.. ..++.++|++|++.+. ..+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKP--TSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 4699999999999999999999999999999999998653 4899999998654 2456789999998763 33799
Q ss_pred HHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCC
Q 000524 950 YESLLYSAWLRLPP-EVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1028 (1444)
Q Consensus 950 ~e~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsg 1028 (1444)
+||+.+....+... ....+..++.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 99998754321100 0112233456889999999987776653 57999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1029 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1029 LD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999877899999999986 57788999999975 4 56654
No 180
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=5.7e-35 Score=341.46 Aligned_cols=206 Identities=27% Similarity=0.385 Sum_probs=174.0
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1444)
.++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 45999999999999999999999999999999999999987 999999998875322 2467999999998999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+||+.+..+..+... .+....++.+++.+||++..++.++
T Consensus 94 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~l~~~~~~~~~----- 134 (303)
T TIGR01288 94 VRENLLVFGRYFGMST----------------------------------REIEAVIPSLLEFARLESKADVRVA----- 134 (303)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCchh-----
Confidence 9999987543321100 0011234567889999988777664
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ . +++|+.++|..+++.++||+|++|++|+
T Consensus 135 ~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~-g~til~~sH~~~~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 135 LLSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-R-GKTILLTTHFMEEAERLCDRLCVLESGR 212 (303)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-C-CCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999864 3 4456667888889999999999999999
Q ss_pred EEEecChhhHHH
Q 000524 403 IVYQGPRELVLE 414 (1444)
Q Consensus 403 iv~~G~~~~~~~ 414 (1444)
+++.|+.+++.+
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999988754
No 181
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-35 Score=311.18 Aligned_cols=213 Identities=26% Similarity=0.378 Sum_probs=178.9
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++++|++..| ++.++|++||+++++||+++|+|+|||||||||++|+|.... .+|+|.++|.++.
T Consensus 4 L~v~~l~~~Y-------------G~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit 68 (237)
T COG0410 4 LEVENLSAGY-------------GKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDIT 68 (237)
T ss_pred eeEEeEeecc-------------cceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecC
Confidence 5667776554 456899999999999999999999999999999999998653 3899999999876
Q ss_pred cc----cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCcCCH
Q 000524 927 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELV-ELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 927 ~~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~lSg 1001 (1444)
.. ..++-++||||....||.+||+|||..++..+.. ++..+..++++.+.+ .|.+.++...| .|||
T Consensus 69 ~~p~~~r~r~Gi~~VPegR~iF~~LTVeENL~~g~~~~~~----~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSG 139 (237)
T COG0410 69 GLPPHERARLGIAYVPEGRRIFPRLTVEENLLLGAYARRD----KEAQERDLEEVYELFPRLKERRNQRAG-----TLSG 139 (237)
T ss_pred CCCHHHHHhCCeEeCcccccchhhCcHHHHHhhhhhcccc----cccccccHHHHHHHChhHHHHhcCccc-----CCCh
Confidence 52 3456799999999999999999999987655432 112222267788777 47777777754 5999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
||||.++|||||+++|++|+|||||.||-|.-...|.++|+++.++ |.||+.+-+... ...+.+||.++|.+ |++++
T Consensus 140 GEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~ 217 (237)
T COG0410 140 GEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVL 217 (237)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999999866 779998888765 47788999999985 89999
Q ss_pred EcCCC
Q 000524 1081 VGPLG 1085 (1444)
Q Consensus 1081 ~G~~~ 1085 (1444)
.|+..
T Consensus 218 ~G~~~ 222 (237)
T COG0410 218 SGTAA 222 (237)
T ss_pred ecCHH
Confidence 99963
No 182
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-35 Score=337.38 Aligned_cols=217 Identities=21% Similarity=0.329 Sum_probs=179.5
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++... ...+.+|+|||++|++||++||+|+||||||||+++|+|...+ ..|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~i~ 72 (286)
T PRK13646 3 IRFDNVSYTYQKGT--------PYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKP--TTGTVTVDDITIT 72 (286)
T ss_pred EEEEEEEEEECCCC--------ccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67889988874210 0123599999999999999999999999999999999998653 4799999998763
Q ss_pred c-------ccccceEEEEecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000524 927 Q-------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGV 996 (1444)
Q Consensus 927 ~-------~~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 996 (1444)
. ..+++.+|||+|++ .+++ .||.|++.|..... ..+.++..+.++++++.+||. +..++. +
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~ 143 (286)
T PRK13646 73 HKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNF---KMNLDEVKNYAHRLLMDLGFSRDVMSQS-----P 143 (286)
T ss_pred cccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 13466799999986 3444 59999998865332 233444556789999999996 566654 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecC
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1075 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~g 1075 (1444)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++
T Consensus 144 ~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~- 221 (286)
T PRK13646 144 FQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE- 221 (286)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 679999999999999999999999999999999999999999999999754 899999999986 57789999999985
Q ss_pred cEEEEEcCC
Q 000524 1076 GQEIYVGPL 1084 (1444)
Q Consensus 1076 g~~~y~G~~ 1084 (1444)
|++++.|+.
T Consensus 222 G~i~~~g~~ 230 (286)
T PRK13646 222 GSIVSQTSP 230 (286)
T ss_pred CEEEEECCH
Confidence 799999875
No 183
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=6.5e-35 Score=329.79 Aligned_cols=215 Identities=25% Similarity=0.362 Sum_probs=173.4
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1444)
..+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 45999999999999999999999999999999999999987 9999999998765432 2459999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||+||+.++....+... ... .. ...+ ..+....++++++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~~-------~~~---~~---~~~~-----------~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (236)
T cd03219 90 LTVLENVMVAAQARTGSG-------LLL---AR---ARRE-----------EREARERAEELLERVGLADLADRPA---- 141 (236)
T ss_pred CCHHHHHHHHHhhccccc-------ccc---cc---cccc-----------HHHHHHHHHHHHHHcCccchhhCCh----
Confidence 999999998754321000 000 00 0000 0011234677899999987666544
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++. .+. +|+.++|+..++.+++|+|++|++
T Consensus 142 -~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~-tii~vsH~~~~~~~~~d~i~~l~~ 218 (236)
T cd03219 142 -GELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RGI-TVLLVEHDMDVVMSLADRVTVLDQ 218 (236)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCC-EEEEEecCHHHHHHhCCEEEEEeC
Confidence 47999999999999999999999999999999999999999999998865 444 455577888889999999999999
Q ss_pred CeEEEecChhhHH
Q 000524 401 GQIVYQGPRELVL 413 (1444)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1444)
|++++.|+++++.
T Consensus 219 G~i~~~~~~~~~~ 231 (236)
T cd03219 219 GRVIAEGTPDEVR 231 (236)
T ss_pred CEEEeecCHHHhc
Confidence 9999999988763
No 184
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-34 Score=368.13 Aligned_cols=215 Identities=29% Similarity=0.431 Sum_probs=181.1
Q ss_pred CCceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcC
Q 000524 843 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG 922 (1444)
Q Consensus 843 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 922 (1444)
....++|+||+|+|+..+ +..+|+|+|+.|++|+.+||+|||||||||++++|.+... +.+|+|.+||
T Consensus 347 ~~g~ief~nV~FsYPsRp----------dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~Rfyd--P~~G~V~idG 414 (1228)
T KOG0055|consen 347 IKGEIEFRNVCFSYPSRP----------DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYD--PTSGEVLIDG 414 (1228)
T ss_pred cccceEEEEEEecCCCCC----------cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCceEEEcC
Confidence 456799999999998643 3579999999999999999999999999999999998765 4689999999
Q ss_pred ccCCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-------Cccccccccc
Q 000524 923 YPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVE-------LKPLIQSLVG 992 (1444)
Q Consensus 923 ~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~-------L~~~~~~~vg 992 (1444)
.++.. ...+..+|.|.|+|.++ ..|++||+.|+- ++... +.++++.++.+ |.+-.||.+|
T Consensus 415 ~di~~~~~~~lr~~iglV~QePvlF-~~tI~eNI~~G~-----~dat~----~~i~~a~k~ana~~fi~~lp~g~~T~vg 484 (1228)
T KOG0055|consen 415 EDIRNLNLKWLRSQIGLVSQEPVLF-ATTIRENIRYGK-----PDATR----EEIEEAAKAANAHDFILKLPDGYDTLVG 484 (1228)
T ss_pred ccchhcchHHHHhhcCeeeechhhh-cccHHHHHhcCC-----CcccH----HHHHHHHHHccHHHHHHhhHHhhccccc
Confidence 98754 34677899999999877 489999998751 22222 23455555443 5556788888
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEE
Q 000524 993 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1072 (1444)
Q Consensus 993 ~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll 1072 (1444)
..++. ||||||||++|||||++||+||+||||||+||+++++.|+++|++. .+|+|.|+++|+.| ..+.+|++++|
T Consensus 485 e~g~q-LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~-~~grTTivVaHRLS--tIrnaD~I~v~ 560 (1228)
T KOG0055|consen 485 ERGVQ-LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKA-SKGRTTIVVAHRLS--TIRNADKIAVM 560 (1228)
T ss_pred CCCCC-CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHh-hcCCeEEEEeeehh--hhhccCEEEEE
Confidence 87654 9999999999999999999999999999999999999999999886 46999999999986 45559999999
Q ss_pred ecCcEEEEEcCC
Q 000524 1073 KRGGQEIYVGPL 1084 (1444)
Q Consensus 1073 ~~gg~~~y~G~~ 1084 (1444)
++ |+++..|..
T Consensus 561 ~~-G~IvE~G~h 571 (1228)
T KOG0055|consen 561 EE-GKIVEQGTH 571 (1228)
T ss_pred EC-CEEEEecCH
Confidence 96 899999985
No 185
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=7.2e-35 Score=324.17 Aligned_cols=200 Identities=30% Similarity=0.419 Sum_probs=167.9
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCH
Confidence 35899999999999999999999999999999999999887 9999999998764432 3579999999988889999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
+||+.++.+..+... .+....++.+++.+||++..+..+ +.
T Consensus 90 ~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (213)
T cd03301 90 YDNIAFGLKLRKVPK----------------------------------DEIDERVREVAELLQIEHLLDRKP-----KQ 130 (213)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhCCh-----hh
Confidence 999988654321100 001123567889999987777655 46
Q ss_pred cchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000524 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1444)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++...+. +|+.++|..+++.+++|+|++|++|++
T Consensus 131 LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~-tvi~~sH~~~~~~~~~d~i~~l~~g~~ 209 (213)
T cd03301 131 LSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGT-TTIYVTHDQVEAMTMADRIAVMNDGQI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHhcCeEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998753344 455577888889999999999999999
Q ss_pred EEec
Q 000524 404 VYQG 407 (1444)
Q Consensus 404 v~~G 407 (1444)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03301 210 QQIG 213 (213)
T ss_pred EecC
Confidence 9876
No 186
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=330.40 Aligned_cols=206 Identities=21% Similarity=0.276 Sum_probs=176.5
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|+++.+. ++.+|+|+|+.|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p--~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETP--SAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEH
Confidence 488999988874 23599999999999999999999999999999999998653 489999999765
Q ss_pred CcccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000524 926 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 1005 (1444)
Q Consensus 926 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1005 (1444)
. ..++.++|++|++.+++.+||+|++.+... . ..+..+.++++.++|.+..+.. +..|||||||
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~----~-----~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkq 140 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK----G-----QWRDAALQALAAVGLADRANEW-----PAALSGGQKQ 140 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc----c-----hHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHH
Confidence 3 235678999999988888999999987421 0 1234578899999998876665 3579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1006 Rl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ .|+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 141 rl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 141 RVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 99999999999999999999999999999999999999865 4899999999986 57788999999986 788888764
No 187
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.3e-34 Score=324.12 Aligned_cols=211 Identities=25% Similarity=0.329 Sum_probs=172.6
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++.. ...+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~v~~~~~~~---------~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 70 (221)
T TIGR02211 2 LKCENLGKRYQEG---------KLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNP--TSGEVLFNGQSLS 70 (221)
T ss_pred EEEEeeeEEccCC---------CcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEhh
Confidence 4677887776311 0124699999999999999999999999999999999998653 4899999998754
Q ss_pred cc---c---cc-ceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcC
Q 000524 927 QE---T---FA-RISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGL 999 (1444)
Q Consensus 927 ~~---~---~~-~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~l 999 (1444)
.. . ++ +.++|++|++.+++.+|++|++.+....+. .......+.+.++++.+++.+..+..+ ..|
T Consensus 71 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 142 (221)
T TIGR02211 71 KLSSNERAKLRNKKLGFIYQFHHLLPDFTALENVAMPLLIGK---KSVKEAKERAYEMLEKVGLEHRINHRP-----SEL 142 (221)
T ss_pred hcCHhHHHHHHHhcEEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 31 1 22 568999999988889999999988654331 122333456789999999987776653 579
Q ss_pred CHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEE
Q 000524 1000 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1078 (1444)
Q Consensus 1000 SgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~ 1078 (1444)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. .+ +.+|++++|++ |++
T Consensus 143 S~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~l~~-G~i 219 (221)
T TIGR02211 143 SGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLEMKD-GQL 219 (221)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEEEeC-CEe
Confidence 999999999999999999999999999999999999999999999764 899999999986 34 55899999986 665
Q ss_pred E
Q 000524 1079 I 1079 (1444)
Q Consensus 1079 ~ 1079 (1444)
+
T Consensus 220 ~ 220 (221)
T TIGR02211 220 F 220 (221)
T ss_pred c
Confidence 4
No 188
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-35 Score=325.06 Aligned_cols=201 Identities=28% Similarity=0.380 Sum_probs=168.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCCHH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1444)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++||+|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999887 9999999988763 246799999999888889999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccccc
Q 000524 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1444)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1444)
||+.++....+... .+....++.+++.+||++..+..+ ..|
T Consensus 92 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 132 (220)
T cd03293 92 DNVALGLELQGVPK----------------------------------AEARERAEELLELVGLSGFENAYP-----HQL 132 (220)
T ss_pred HHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc-----ccC
Confidence 99998654322100 001123567889999987666554 469
Q ss_pred chhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc--CCe
Q 000524 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1444)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~--~G~ 402 (1444)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++....+. +|+.++|..+++.+.+|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~-tiii~sH~~~~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGK-TVLLVTHDIDEAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCC-EEEEEecCHHHHHHhCCEEEEEECCCCE
Confidence 999999999999999999999999999999999999999999987643344 45557777888899999999999 799
Q ss_pred EEEecChh
Q 000524 403 IVYQGPRE 410 (1444)
Q Consensus 403 iv~~G~~~ 410 (1444)
++..++.+
T Consensus 212 i~~~~~~~ 219 (220)
T cd03293 212 IVAEVEVD 219 (220)
T ss_pred EEEEEEec
Confidence 99988753
No 189
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=335.56 Aligned_cols=224 Identities=26% Similarity=0.372 Sum_probs=179.5
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCC-------CccceEEEEcCCC-CC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF-------VPERTAAYISQHD-NH 237 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d-~~ 237 (1444)
.+|+|+|+.|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++... ..++.++||+|++ ..
T Consensus 20 ~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~ 96 (288)
T PRK13643 20 RALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQ 96 (288)
T ss_pred cceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcchh
Confidence 5999999999999999999999999999999999999998 99999999987521 1245799999986 24
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc-ccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTMV 316 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1444)
+...||.||+.|+.+..+... .+...+++++++.+||. ...+.
T Consensus 97 l~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~-- 140 (288)
T PRK13643 97 LFEETVLKDVAFGPQNFGIPK----------------------------------EKAEKIAAEKLEMVGLADEFWEK-- 140 (288)
T ss_pred cccchHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhccC--
Confidence 445799999998764332100 01122456788899996 34443
Q ss_pred cCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEE
Q 000524 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1444)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1444)
.++.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. . +.+|+.++|+..++.+++|+|+
T Consensus 141 ---~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~til~vtHd~~~~~~~~dri~ 215 (288)
T PRK13643 141 ---SPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-S-GQTVVLVTHLMDDVADYADYVY 215 (288)
T ss_pred ---CcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 3457999999999999999999999999999999999999999999998764 3 4456667888889999999999
Q ss_pred EEcCCeEEEecChhhHH---HHHHhcCCCCCCCCChhHHH
Q 000524 397 LLSDGQIVYQGPRELVL---EFFESMGFKCPKRKGVADFL 433 (1444)
Q Consensus 397 lL~~G~iv~~G~~~~~~---~~F~~~Gf~cp~~~~~adfl 433 (1444)
+|++|+++++|+++++. ++++..|+.+|.....++.+
T Consensus 216 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 216 LLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 99999999999998874 34556677776654444433
No 190
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.8e-34 Score=323.13 Aligned_cols=208 Identities=24% Similarity=0.327 Sum_probs=177.1
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~l~~v~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~ 66 (223)
T TIGR03740 2 ETKNLSKRFG-------------KQTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTR 66 (223)
T ss_pred EEEeEEEEEC-------------CEEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccc
Confidence 4667766553 2469999999999999999999999999999999999865 358999999987643
Q ss_pred ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHH
Q 000524 928 ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRL 1007 (1444)
Q Consensus 928 ~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl 1007 (1444)
.. .+.++|++|++.+++.+|++|++.+....+. .. +..+.++++.+++.+..+..+ ..||||||||+
T Consensus 67 ~~-~~~~~~~~q~~~~~~~~t~~~~~~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv 133 (223)
T TIGR03740 67 KD-LHKIGSLIESPPLYENLTARENLKVHTTLLG---LP----DSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRL 133 (223)
T ss_pred cc-cccEEEEcCCCCccccCCHHHHHHHHHHHcC---CC----HHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHH
Confidence 22 2568999999988888999999987654432 11 234788999999998777653 57999999999
Q ss_pred HHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCC
Q 000524 1008 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1085 (1444)
Q Consensus 1008 ~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~ 1085 (1444)
+||++++.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|+..
T Consensus 134 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 134 GIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 9999999999999999999999999999999999999877999999999986 57789999999985 7999999864
No 191
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-35 Score=303.00 Aligned_cols=216 Identities=26% Similarity=0.374 Sum_probs=181.4
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
|+.+|++|++. .+.+|++||++++|||++||+|||||||||||++|+|...+ .+|++.+||.+.+
T Consensus 2 i~a~nls~~~~-------------Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSLA-------------GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEee-------------cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 45678888874 35799999999999999999999999999999999998764 4799999999876
Q ss_pred cc---cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000524 927 QE---TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 1003 (1444)
Q Consensus 927 ~~---~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1003 (1444)
+. ...+..+..+|+..+..-.||+|-+.++..-... ....++..+.++++|+..++.+++... ...|||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~-g~~~~e~~~i~~~ala~~d~~~la~R~-----y~~LSGGE 140 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRS-GREPEEDERIAAQALAATDLSGLAGRD-----YRTLSGGE 140 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhccccccc-CCCchhhHHHHHHHHHHcChhhhhccc-----hhhcCchH
Confidence 53 3456778999998887668999999887422111 112224445688999999999887665 46799999
Q ss_pred HHHHHHHHHHhh------CCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 1004 RKRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 1004 rkRl~ia~~L~~------~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
||||.+||.|++ ++++||||||||.||...+..++++.|+++++|..|+|+.||... ....+|||++|++ ||
T Consensus 141 qQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Gr 218 (259)
T COG4559 141 QQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GR 218 (259)
T ss_pred HHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-Ce
Confidence 999999999975 356999999999999999999999999999999999999999874 6678999999985 89
Q ss_pred EEEEcCCC
Q 000524 1078 EIYVGPLG 1085 (1444)
Q Consensus 1078 ~~y~G~~~ 1085 (1444)
++..|++.
T Consensus 219 v~a~g~p~ 226 (259)
T COG4559 219 VIASGSPQ 226 (259)
T ss_pred EeecCCHH
Confidence 99999874
No 192
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-35 Score=347.13 Aligned_cols=207 Identities=24% Similarity=0.326 Sum_probs=175.7
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-------cceEEEEcCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDN 236 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1444)
...+|+|+|+.|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++||+|++.
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~ 116 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFA 116 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCc
Confidence 346899999999999999999999999999999999999997 9999999998865432 247999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1444)
+++.+||+||+.|+.+..+... .+...+++++++.+||++..+..+
T Consensus 117 l~~~~Tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~e~L~~~gL~~~~~~~~ 162 (400)
T PRK10070 117 LMPHMTVLDNTAFGMELAGINA----------------------------------EERREKALDALRQVGLENYAHSYP 162 (400)
T ss_pred CCCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhcCc
Confidence 9999999999999765432110 001123567899999987666554
Q ss_pred cCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEE
Q 000524 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1444)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1444)
+.|||||||||+|||||+.+|++|||||||+|||+.++..+.+.|+++.+..+ ++|+.++|+.+++.+++|+|+
T Consensus 163 -----~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g-~TIIivTHd~~~~~~~~Dri~ 236 (400)
T PRK10070 163 -----DELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQ-RTIVFISHDLDEAMRIGDRIA 236 (400)
T ss_pred -----ccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCC-CeEEEEECCHHHHHHhCCEEE
Confidence 47999999999999999999999999999999999999999999998865334 455557888899999999999
Q ss_pred EEcCCeEEEecChhhHH
Q 000524 397 LLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1444)
+|++|++++.|+++++.
T Consensus 237 vL~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 237 IMQNGEVVQVGTPDEIL 253 (400)
T ss_pred EEECCEEEecCCHHHHH
Confidence 99999999999988764
No 193
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=325.37 Aligned_cols=201 Identities=25% Similarity=0.335 Sum_probs=166.1
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-------cceEEEEcCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDNH 237 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999999887 9999999998865432 2469999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1444)
++.+||+||+.+.....+... .+.+.+++.+++.+||++..++.+
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~- 143 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKKP----------------------------------AEINSRALEMLAAVGLEHRANHRP- 143 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCh-
Confidence 999999999998654321100 001123567889999987666554
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1444)
+.|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.. +|++++
T Consensus 144 ----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g-~tvii~sH~~~~~~~-~~~~~~ 217 (233)
T PRK11629 144 ----SELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQG-TAFLVVTHDLQLAKR-MSRQLE 217 (233)
T ss_pred ----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCC-CEEEEEeCCHHHHHh-hCEEEE
Confidence 46999999999999999999999999999999999999999999998764334 455556777777665 589999
Q ss_pred EcCCeEEEecCh
Q 000524 398 LSDGQIVYQGPR 409 (1444)
Q Consensus 398 L~~G~iv~~G~~ 409 (1444)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998864
No 194
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.7e-34 Score=329.47 Aligned_cols=214 Identities=23% Similarity=0.311 Sum_probs=180.1
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++++|+++.+. .+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 1 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~i~ 65 (252)
T TIGR03005 1 VRFSDVTKRFG-------------ILTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPI--DEGQIQVEGEQLY 65 (252)
T ss_pred CEEEEEEEEeC-------------CeeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 35778887763 23699999999999999999999999999999999998653 4899999998753
Q ss_pred c----------------ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc
Q 000524 927 Q----------------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSL 990 (1444)
Q Consensus 927 ~----------------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~ 990 (1444)
. ..+++.++|++|++.+++..|+.||+.+..... .....+...+.++++++.+++.+..+..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~ 143 (252)
T TIGR03005 66 HMPGRNGPLVPADEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLV--LGMARAEAEKRAMELLDMVGLADKADHM 143 (252)
T ss_pred ccccccccccccchhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHcCChhHhhcC
Confidence 2 123567999999999899999999998753221 1123344455688999999998877665
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceE
Q 000524 991 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDEL 1069 (1444)
Q Consensus 991 vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v 1069 (1444)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|++. ++...+|++
T Consensus 144 -----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i 217 (252)
T TIGR03005 144 -----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRV 217 (252)
T ss_pred -----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 3579999999999999999999999999999999999999999999998765 899999999986 577889999
Q ss_pred EEEecCcEEEEEcCC
Q 000524 1070 FLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1070 ~ll~~gg~~~y~G~~ 1084 (1444)
++|++ |++++.|+.
T Consensus 218 ~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 218 CFFDK-GRIVEQGKP 231 (252)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 799998875
No 195
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=335.39 Aligned_cols=216 Identities=23% Similarity=0.303 Sum_probs=181.8
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
-++++|+++.++.. ..+.+|+|+|++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKED----------QEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEA--ESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCCC----------CcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEC
Confidence 37889998887421 123599999999999999999999999999999999998653 489999999886
Q ss_pred Cc---ccccceEEEEecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000524 926 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 926 ~~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1001 (1444)
.. ...++.+||++|++. .++..||+|++.|..... ..+.++.++.++++++.++|.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSg 143 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENK---GIPHEEMKERVNEALELVGMQDFKEREP-----ARLSG 143 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 43 234567899999973 567789999998865432 2344455567899999999998777764 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++ ..+|++++|++ |+++.
T Consensus 144 Gq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~-G~i~~ 220 (279)
T PRK13650 144 GQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN-GQVES 220 (279)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 999999999986 45 67999999985 89999
Q ss_pred EcCC
Q 000524 1081 VGPL 1084 (1444)
Q Consensus 1081 ~G~~ 1084 (1444)
.|+.
T Consensus 221 ~g~~ 224 (279)
T PRK13650 221 TSTP 224 (279)
T ss_pred ECCH
Confidence 9885
No 196
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-34 Score=327.95 Aligned_cols=211 Identities=22% Similarity=0.325 Sum_probs=177.4
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+. .+.+|+|+|+.+++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 6 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 70 (237)
T PRK11614 6 LSFDKVSAHYG-------------KIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRA--TSGRIVFDGKDIT 70 (237)
T ss_pred EEEEeEEEeeC-------------CceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCceEEECCEecC
Confidence 77889888763 23699999999999999999999999999999999998653 4899999998764
Q ss_pred cc----cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHc-CCcccccccccCCCCCcCCH
Q 000524 927 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELV-ELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 927 ~~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l-~L~~~~~~~vg~~~~~~lSg 1001 (1444)
.. ..++.++|++|+..+++.+||.||+.+..... ..+...+.++++++.+ ++.+..+.. ...|||
T Consensus 71 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~ 140 (237)
T PRK11614 71 DWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFA-----ERDQFQERIKWVYELFPRLHERRIQR-----AGTMSG 140 (237)
T ss_pred CCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhcc-----ChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCCH
Confidence 32 23567999999998899899999998754221 1122234567778887 476655544 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1081 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~ 1081 (1444)
|||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 141 G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 218 (237)
T PRK11614 141 GEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVLE 218 (237)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEee
Confidence 9999999999999999999999999999999999999999999877999999999986 68899999999986 799999
Q ss_pred cCC
Q 000524 1082 GPL 1084 (1444)
Q Consensus 1082 G~~ 1084 (1444)
|+.
T Consensus 219 ~~~ 221 (237)
T PRK11614 219 DTG 221 (237)
T ss_pred CCH
Confidence 986
No 197
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=7.5e-35 Score=323.50 Aligned_cols=193 Identities=25% Similarity=0.366 Sum_probs=163.3
Q ss_pred eEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc---ccccceEEEEecCCC-CCCCC
Q 000524 872 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDI-HSPFV 947 (1444)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~-~~~~l 947 (1444)
+.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 469999999999999999999999999999999999765 348999999987542 234567899999974 35678
Q ss_pred cHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000524 948 TVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1027 (1444)
Q Consensus 948 Tv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTs 1027 (1444)
|++|++.+....+ .......++.++++++.++|.+..++.+ ..||||||||++|||+|+.+|++|+|||||+
T Consensus 92 t~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~ 163 (211)
T cd03225 92 TVEEEVAFGLENL---GLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTA 163 (211)
T ss_pred cHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 9999998765432 1223333456889999999987766653 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecC
Q 000524 1028 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1075 (1444)
Q Consensus 1028 gLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~g 1075 (1444)
|||+.++..+.+.|++++++|+|||+++|++. ++...||++++|++|
T Consensus 164 ~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 164 GLDPAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999999877999999999986 577789999999864
No 198
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=330.81 Aligned_cols=218 Identities=22% Similarity=0.262 Sum_probs=180.2
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
-+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRFG-------------GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEEC-------------CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 377888887763 2469999999999999999999999999999999999865 3589999999876
Q ss_pred Ccc---c-ccceEEEEecCCCCCCCCcHHHHHHHHHHhcCC----------C--CCCHHHHHHHHHHHHHHcCCcccccc
Q 000524 926 KQE---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLP----------P--EVDSETRKMFIEEVMELVELKPLIQS 989 (1444)
Q Consensus 926 ~~~---~-~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~----------~--~~~~~~~~~~v~~~l~~l~L~~~~~~ 989 (1444)
... . .+..++|++|++.+++.+||+||+.+....... . .....+....++++++.+++.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 431 1 233579999999999999999999886432110 0 00111233467889999999877766
Q ss_pred cccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcce
Q 000524 990 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDE 1068 (1444)
Q Consensus 990 ~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~ 1068 (1444)
. +..||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |+|||+++|++. ++.+.||+
T Consensus 150 ~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 Q-----AGNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 5 3579999999999999999999999999999999999999999999999775 899999999986 67788999
Q ss_pred EEEEecCcEEEEEcCCC
Q 000524 1069 LFLMKRGGQEIYVGPLG 1085 (1444)
Q Consensus 1069 v~ll~~gg~~~y~G~~~ 1085 (1444)
+++|++ |++++.|+..
T Consensus 224 i~~l~~-g~i~~~~~~~ 239 (255)
T PRK11300 224 IYVVNQ-GTPLANGTPE 239 (255)
T ss_pred EEEEEC-CeEEecCCHH
Confidence 999985 7999998863
No 199
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=328.27 Aligned_cols=216 Identities=23% Similarity=0.281 Sum_probs=178.6
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISGY 923 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 923 (1444)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSFG-------------QVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEEC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 67888887763 245999999999999999999999999999999999976431 35899999998
Q ss_pred cCCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccCCCC
Q 000524 924 PKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL----IQSLVGLPGV 996 (1444)
Q Consensus 924 ~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~~~~ 996 (1444)
++.. ..+++.+||++|++.+++.+||.||+.+....+.. ....++..+.++++++.++|.+. .++. +
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~ 144 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRL-VKSKKELQERVRWALEKAQLWDEVKDRLDAP-----A 144 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccc-cCCHHHHHHHHHHHHHHcCCCcchhhhhcCC-----c
Confidence 7643 23456789999999888899999999886543211 11223344568899999998642 3333 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|++. ++.+.+|++++|++ |
T Consensus 145 ~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G 221 (250)
T PRK14247 145 GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-G 221 (250)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 67999999999999999999999999999999999999999999999864 899999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
+++..|+.
T Consensus 222 ~i~~~g~~ 229 (250)
T PRK14247 222 QIVEWGPT 229 (250)
T ss_pred eEEEECCH
Confidence 99998875
No 200
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-34 Score=333.21 Aligned_cols=205 Identities=22% Similarity=0.331 Sum_probs=170.0
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCC-CCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHD-NHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 240 (1444)
..+|+|+|+.|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35899999999999999999999999999999999999997 9999999998865332 35799999997 36778
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||+||+.|+.+..+... .+....++.+++.+||++..+..+
T Consensus 97 ~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~---- 138 (279)
T PRK13650 97 ATVEDDVAFGLENKGIPH----------------------------------EEMKERVNEALELVGMQDFKEREP---- 138 (279)
T ss_pred ccHHHHHHhhHHhCCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc----
Confidence 899999998754322100 011224577899999987666554
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.| |+.++|..+++ ..+|+|++|++
T Consensus 139 -~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~t-ilivtH~~~~~-~~~dri~~l~~ 215 (279)
T PRK13650 139 -ARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMT-VISITHDLDEV-ALSDRVLVMKN 215 (279)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHH-HhCCEEEEEEC
Confidence 4799999999999999999999999999999999999999999999986533444 55566777777 58999999999
Q ss_pred CeEEEecChhhHH
Q 000524 401 GQIVYQGPRELVL 413 (1444)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1444)
|+++..|+++++.
T Consensus 216 G~i~~~g~~~~~~ 228 (279)
T PRK13650 216 GQVESTSTPRELF 228 (279)
T ss_pred CEEEEECCHHHHH
Confidence 9999999988765
No 201
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.2e-34 Score=331.19 Aligned_cols=207 Identities=21% Similarity=0.333 Sum_probs=172.0
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc------cceEEEEcCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1444)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 35899999999999999999999999999999999999987 9999999988764321 35699999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+.+||.||+.+......... .. +....++.+++.+||++..+..+
T Consensus 97 ~~~tv~enl~~~~~~~~~~~---------~~------------------------~~~~~~~~~l~~~gl~~~~~~~~-- 141 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQLP---------AP------------------------LLHSTVMMKLEAVGLRGAAKLMP-- 141 (269)
T ss_pred CCCCHHHHHHHHHHHccCCC---------HH------------------------HHHHHHHHHHHHcCChhhhhCCh--
Confidence 99999999988643210000 00 01123466789999988777655
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.... +++|+.++|+.+++.+++|+|++|
T Consensus 142 ---~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d~v~~l 217 (269)
T PRK11831 142 ---SELSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSAL-GVTCVVVSHDVPEVLSIADHAYIV 217 (269)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhhCEEEEE
Confidence 4699999999999999999999999999999999999999999999886533 445555778888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|++++.|+.+++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 202
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.8e-34 Score=327.69 Aligned_cols=219 Identities=21% Similarity=0.256 Sum_probs=176.0
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++++|+++.++ ++.+|+|+|+.|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 1 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 67 (243)
T TIGR01978 1 LKIKDLHVSVE-------------DKEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLL 67 (243)
T ss_pred CeEeeEEEEEC-------------CEEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecC
Confidence 35677877763 24699999999999999999999999999999999997411245899999998754
Q ss_pred cc---c-ccceEEEEecCCCCCCCCcHHHHHHHHHHhcCC--C--CCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000524 927 QE---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLP--P--EVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 997 (1444)
Q Consensus 927 ~~---~-~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~--~--~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1444)
.. . .+..++|++|++..++.+|++|++.+....... . ..+.++..+.++++++.++|. +..+..++ .
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~ 143 (243)
T TIGR01978 68 ELEPDERARAGLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----E 143 (243)
T ss_pred CCCHHHhhccceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----c
Confidence 31 1 123489999999999999999999876432211 0 112233345688999999997 35554431 2
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHh-cceEEEEecCc
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDA-FDELFLMKRGG 1076 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~-fD~v~ll~~gg 1076 (1444)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++... +|++++|++ |
T Consensus 144 ~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G 221 (243)
T TIGR01978 144 GFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-G 221 (243)
T ss_pred CcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-C
Confidence 49999999999999999999999999999999999999999999999877899999999986 46666 799999985 7
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (243)
T TIGR01978 222 RIVKSGDV 229 (243)
T ss_pred EEEEecCH
Confidence 99999875
No 203
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=329.41 Aligned_cols=215 Identities=22% Similarity=0.247 Sum_probs=177.0
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 922 (1444)
-+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 478999988773 235999999999999999999999999999999999976532 2479999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc----ccccccccC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK----PLIQSLVGL 993 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~----~~~~~~vg~ 993 (1444)
.++.. ..+++.++|++|++..++ +||+||+.+....+. .......++.++++++.+++. +..++.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHG--TKDKKKLDEIVEQSLKKSALWNEVKDKLNTN--- 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHhCCchhhHHHHhCC---
Confidence 87532 234567999999988774 899999988654321 112233445688899999884 333443
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe
Q 000524 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1073 (1444)
Q Consensus 994 ~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~ 1073 (1444)
.+.||||||||++|||+|+.+|++|+|||||+|||+.+...+++.|+++. +++|||+++|+++ ++.+.+|++++|+
T Consensus 148 --~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~ 223 (254)
T PRK14273 148 --ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFL 223 (254)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEE
Confidence 46899999999999999999999999999999999999999999999996 4799999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000524 1074 RGGQEIYVGPL 1084 (1444)
Q Consensus 1074 ~gg~~~y~G~~ 1084 (1444)
+ |+++..|+.
T Consensus 224 ~-G~i~~~g~~ 233 (254)
T PRK14273 224 N-GCIEEESST 233 (254)
T ss_pred C-CEEEEeCCH
Confidence 5 899999875
No 204
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=9.5e-35 Score=327.55 Aligned_cols=205 Identities=22% Similarity=0.365 Sum_probs=171.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 45999999999999999999999999999999999999987 9999999998754332 2469999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||+||+.+.....+.. . .+....++.+++.+||++..++.+
T Consensus 90 ~tv~~~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 131 (232)
T cd03218 90 LTVEENILAVLEIRGLS-K---------------------------------KEREEKLEELLEEFHITHLRKSKA---- 131 (232)
T ss_pred CcHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHcCChhhhhCCh----
Confidence 99999998864322110 0 001123567889999987666554
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+ ++|+.++|+.+++.+++|+|++|++
T Consensus 132 -~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~ 208 (232)
T cd03218 132 -SSLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-RG-IGVLITDHNVRETLSITDRAYIIYE 208 (232)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998864 34 4555577888899999999999999
Q ss_pred CeEEEecChhhHH
Q 000524 401 GQIVYQGPRELVL 413 (1444)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1444)
|++++.|+.+++.
T Consensus 209 G~i~~~~~~~~~~ 221 (232)
T cd03218 209 GKVLAEGTPEEIA 221 (232)
T ss_pred CeEEEEeCHHHhh
Confidence 9999999987653
No 205
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.7e-35 Score=346.15 Aligned_cols=206 Identities=28% Similarity=0.448 Sum_probs=165.9
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1444)
++++|+|+++++|+.++|+|+||||||||+++|+|+++|+ +|+|.+||++..+..+ ++.++||+|+|.+++ -|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-cc
Confidence 6899999999999999999999999999999999999987 9999999999887754 589999999996666 59
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
+||||.++..-. +. ++..+++.. ..+.+.+.-+...||.+|+.+ +
T Consensus 411 ireNi~l~~~~~---s~----------------------e~i~~al~~---------a~l~~~v~~p~GLdt~ige~G-~ 455 (559)
T COG4988 411 IRENILLARPDA---SD----------------------EEIIAALDQ---------AGLLEFVPKPDGLDTVIGEGG-A 455 (559)
T ss_pred HHHHhhccCCcC---CH----------------------HHHHHHHHH---------hcHHHhhcCCCcccchhccCC-C
Confidence 999999864210 00 000001000 011222222557789999754 5
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
+|||||+|||++||||+.+++++++||||++||.+|...|.+.|.++++ ++|+++ ++|.. +...-+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~-itHrl-~~~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLV-ITHRL-EDAADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEE-EEcCh-HHHhcCCEEEEecCCc
Confidence 8999999999999999999999999999999999999999999999874 355555 55543 4566789999999999
Q ss_pred EEEecChhhHHH
Q 000524 403 IVYQGPRELVLE 414 (1444)
Q Consensus 403 iv~~G~~~~~~~ 414 (1444)
++++|.++++.+
T Consensus 532 l~~~g~~~~L~~ 543 (559)
T COG4988 532 LVEQGTHEELSE 543 (559)
T ss_pred eeccCCHHHHhh
Confidence 999999999854
No 206
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=9.3e-35 Score=339.12 Aligned_cols=205 Identities=27% Similarity=0.383 Sum_probs=176.3
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 45999999999999999999999999999999999999998 999999999875432 2467999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+||+.+.+++.+... .+....++.+++.+||++..++.++
T Consensus 92 v~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 132 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------------------------------QLLKQRVEEMIELVGLRPEQHKKIG----- 132 (301)
T ss_pred HHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCchHhcCchh-----
Confidence 9999998765432110 0011235678999999988876654
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.|||||||||+||+||+++|++++|||||+|||+.++..+.+.|+++. .+ ++|+.++|..+++.++||+|++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~--~~-~tiii~sH~l~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 133 QLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIG--KD-KTIILSTHIMQEVEAICDRVIIINKGK 209 (301)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhc--CC-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 699999999999999999999999999999999999999999999874 24 556667888899999999999999999
Q ss_pred EEEecChhhHHH
Q 000524 403 IVYQGPRELVLE 414 (1444)
Q Consensus 403 iv~~G~~~~~~~ 414 (1444)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998754
No 207
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-35 Score=337.34 Aligned_cols=206 Identities=22% Similarity=0.323 Sum_probs=170.2
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCC-------CccceEEEEcCCCC-
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF-------VPERTAAYISQHDN- 236 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~- 236 (1444)
.++|+|||+.|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 45999999999999999999999999999999999999987 99999999987531 11357999999862
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc-cccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTM 315 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1444)
.+...||+||+.|+.+..+... .+...+++.+++.+||. +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVSE----------------------------------EDAKQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCChhhhhCC
Confidence 3445799999998754322100 01122467789999997 455554
Q ss_pred ccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeE
Q 000524 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1444)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1444)
+ +.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++... +++|+.++|+.+++.+++|+|
T Consensus 143 ~-----~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~-g~tviiitHd~~~~~~~~drv 216 (290)
T PRK13634 143 P-----FELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEK-GLTTVLVTHSMEDAARYADQI 216 (290)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEE
Confidence 4 5799999999999999999999999999999999999999999999986533 455666888888999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000524 396 ILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1444)
++|++|++++.|+.+++.
T Consensus 217 ~~l~~G~i~~~g~~~~~~ 234 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIF 234 (290)
T ss_pred EEEECCEEEEECCHHHHh
Confidence 999999999999988764
No 208
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.5e-35 Score=309.97 Aligned_cols=202 Identities=24% Similarity=0.388 Sum_probs=185.4
Q ss_pred CceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEEecCCCCCCCCcH
Q 000524 870 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTV 949 (1444)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv 949 (1444)
+++.+++|+||.++||++++++|+|||||||++++|.|... +.+|.|.++|.|.++.. +.++||.|.+.-++|.+||
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~tv 89 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQEI-KNRIGYLPEERGLYPKMTV 89 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhhh-hhhcccChhhhccCccCcH
Confidence 45789999999999999999999999999999999999876 35899999999987643 4568999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000524 950 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1444)
Q Consensus 950 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgL 1029 (1444)
.|.|.|-|.++ .++.++....++..|+.+++....... ++.||-|++|++.+-.+++++|.+++||||.|||
T Consensus 90 ~dql~yla~Lk---Gm~~~e~~~~~~~wLer~~i~~~~~~k-----Ik~LSKGnqQKIQfisaviHePeLlILDEPFSGL 161 (300)
T COG4152 90 EDQLKYLAELK---GMPKAEIQKKLQAWLERLEIVGKKTKK-----IKELSKGNQQKIQFISAVIHEPELLILDEPFSGL 161 (300)
T ss_pred HHHHHHHHHhc---CCcHHHHHHHHHHHHHhccccccccch-----HHHhhhhhhHHHHHHHHHhcCCCEEEecCCccCC
Confidence 99999999987 456677777899999999999888776 4689999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1030 D~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
||.+.+.+-+.+.++.++|.|||+++|+.+ .+-++||++++|++ |+.|..|+.
T Consensus 162 DPVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v 214 (300)
T COG4152 162 DPVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTV 214 (300)
T ss_pred ChhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccH
Confidence 999999999999999999999999999997 69999999999986 799999986
No 209
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=6.5e-35 Score=327.73 Aligned_cols=204 Identities=24% Similarity=0.348 Sum_probs=168.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCC-----CCCCCeecEEEECCccCCCCC-----ccceEEEEcCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKL-----DSSLKVSGRVTYNGHDMGEFV-----PERTAAYISQH 234 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l-----~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~ 234 (1444)
+++|+|+|+.+++|++++|+||||||||||+++|+|.+ +|. +|+|.++|+++.... .++.++|++|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 35999999999999999999999999999999999999 776 999999999875432 24579999999
Q ss_pred CCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccc
Q 000524 235 DNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1444)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1444)
+.++ .+||+||+.++.+..+.... .+....++++++.+||.+..+.
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~ 135 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGIKLK---------------------------------EELDERVEEALRKAALWDEVKD 135 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCChHHhc
Confidence 8877 79999999986543211000 0011235678899999876655
Q ss_pred cccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCe
Q 000524 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1444)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1444)
.+. +..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|+.+++.+++|+
T Consensus 136 ~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~ 209 (227)
T cd03260 136 RLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKK--E-YTIVIVTHNMQQAARVADR 209 (227)
T ss_pred cCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhh--C-cEEEEEeccHHHHHHhCCE
Confidence 431 357999999999999999999999999999999999999999999999864 2 5566678888889999999
Q ss_pred EEEEcCCeEEEecChhh
Q 000524 395 IILLSDGQIVYQGPREL 411 (1444)
Q Consensus 395 vilL~~G~iv~~G~~~~ 411 (1444)
+++|++|++++.|+.++
T Consensus 210 i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 210 TAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEEeCCEEEEecCccc
Confidence 99999999999998764
No 210
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=333.24 Aligned_cols=213 Identities=22% Similarity=0.304 Sum_probs=178.8
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++++|+++.++ +++.+|+|||++|++||++||+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 67 (274)
T PRK13644 2 IRLENVSYSYP------------DGTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTG 67 (274)
T ss_pred EEEEEEEEEcC------------CCCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECC
Confidence 56778877663 12359999999999999999999999999999999999865 35899999998764
Q ss_pred c----ccccceEEEEecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000524 927 Q----ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 927 ~----~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1001 (1444)
. ...++.+||++|++. .+...|+.||+.|..... ..+....++.++++++.++|.+..++.+ ..|||
T Consensus 68 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~ 139 (274)
T PRK13644 68 DFSKLQGIRKLVGIVFQNPETQFVGRTVEEDLAFGPENL---CLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSG 139 (274)
T ss_pred ccccHHHHHhheEEEEEChhhhcccchHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCH
Confidence 3 234567999999975 356689999998765432 1234444566889999999988777663 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1081 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~ 1081 (1444)
|||||++||+||+.+|+||+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++ ..+|++++|++ |++++.
T Consensus 140 G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~ 216 (274)
T PRK13644 140 GQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLE 216 (274)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEE
Confidence 9999999999999999999999999999999999999999999877999999999986 45 67999999986 799999
Q ss_pred cCC
Q 000524 1082 GPL 1084 (1444)
Q Consensus 1082 G~~ 1084 (1444)
|+.
T Consensus 217 g~~ 219 (274)
T PRK13644 217 GEP 219 (274)
T ss_pred CCH
Confidence 985
No 211
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-34 Score=328.96 Aligned_cols=220 Identities=23% Similarity=0.253 Sum_probs=178.6
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISGY 923 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 923 (1444)
++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.
T Consensus 5 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~ 71 (253)
T PRK14267 5 IETVNLRVYYG-------------SNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGR 71 (253)
T ss_pred EEEEeEEEEeC-------------CeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCE
Confidence 67889888763 235999999999999999999999999999999999986532 34899999998
Q ss_pred cCC--c---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000524 924 PKK--Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 998 (1444)
Q Consensus 924 ~~~--~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1444)
++. . ..+++.++|++|++.+++.+||.||+.+....+.. ....+..++.++++++.+++.+...... ......
T Consensus 72 ~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~ 149 (253)
T PRK14267 72 NIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGL-VKSKKELDERVEWALKKAALWDEVKDRL-NDYPSN 149 (253)
T ss_pred EccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCc-cCCHHHHHHHHHHHHHHcCCccchhhhh-ccChhh
Confidence 764 1 23456799999999999999999999886543311 1123334456788999999853211111 112467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEE
Q 000524 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1078 (1444)
Q Consensus 999 lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~ 1078 (1444)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 150 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i 226 (253)
T PRK14267 150 LSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLYL-GKL 226 (253)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 699999999986 57888999999986 799
Q ss_pred EEEcCC
Q 000524 1079 IYVGPL 1084 (1444)
Q Consensus 1079 ~y~G~~ 1084 (1444)
++.|+.
T Consensus 227 ~~~~~~ 232 (253)
T PRK14267 227 IEVGPT 232 (253)
T ss_pred EEeCCH
Confidence 999885
No 212
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=326.85 Aligned_cols=213 Identities=24% Similarity=0.329 Sum_probs=179.1
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFYG-------------AHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMP--RSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEEC-------------CeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEecc
Confidence 67888887763 23599999999999999999999999999999999998653 5899999998652
Q ss_pred ------c---ccccceEEEEecCCCCCCCCcHHHHHHHH-HHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000524 927 ------Q---ETFARISGYCEQNDIHSPFVTVYESLLYS-AWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 996 (1444)
Q Consensus 927 ------~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~-a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1444)
. ...++.++|++|++.+++.+||.|++.+. .... ....++....+.++++.+|+.+..++.+
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~---~~~~~~~~~~~~~~l~~~gl~~~~~~~~----- 139 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVL---GLSKDQALARAEKLLERLRLKPYADRFP----- 139 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCChhhhhCCh-----
Confidence 0 12345789999999999999999999653 2221 1223334456889999999988777653
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 140 ~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g 217 (242)
T PRK11124 140 LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-G 217 (242)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999777999999999986 57788999999985 8
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (242)
T PRK11124 218 HIVEQGDA 225 (242)
T ss_pred EEEEeCCH
Confidence 99999875
No 213
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.5e-34 Score=337.91 Aligned_cols=229 Identities=21% Similarity=0.244 Sum_probs=184.4
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
-+.++|++.+++............+...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 478899887775321000000001235799999999999999999999999999999999998653 489999999876
Q ss_pred Ccc------cccceEEEEecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000524 926 KQE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGV 996 (1444)
Q Consensus 926 ~~~------~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 996 (1444)
... .+++.++||+|++ .++|.+||.|++.+......+ ..+.++.++.+.++++.++|. +..++. +
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~-~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p 159 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHP-KLSRQEVKDRVKAMMLKVGLLPNLINRY-----P 159 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhcc-CCCHHHHHHHHHHHHHHcCCChHHhcCC-----c
Confidence 431 2456799999997 578899999999886543221 234455666788999999995 344554 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecC
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1075 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~g 1075 (1444)
..||||||||++||+||+.+|++|++||||+|||..++..|++.|+++.++ |.|||+++|++. .+.+.+|++++|.+
T Consensus 160 ~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~- 237 (331)
T PRK15079 160 HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL- 237 (331)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 679999999999999999999999999999999999999999999999765 899999999986 57778999999985
Q ss_pred cEEEEEcCC
Q 000524 1076 GQEIYVGPL 1084 (1444)
Q Consensus 1076 g~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 238 G~ive~g~~ 246 (331)
T PRK15079 238 GHAVELGTY 246 (331)
T ss_pred CEEEEEcCH
Confidence 899999985
No 214
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=329.12 Aligned_cols=214 Identities=24% Similarity=0.297 Sum_probs=177.4
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 922 (1444)
.++++|+++.++ ++.+|+|+|++|++||++||+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWYG-------------EKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 588899987763 235999999999999999999999999999999999976431 2589999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 993 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1444)
.++.. ..+++.++|++|++.+++ +|++||+.+....+ ....+..++.++++++.+++.+ ..++.
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 151 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIH---GANKKDLDGVVENALRSAALWDETSDRLKSP--- 151 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCCcchhhhhcCC---
Confidence 87532 124567999999988887 89999998875432 1233334456888999999853 23333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe
Q 000524 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1073 (1444)
Q Consensus 994 ~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~ 1073 (1444)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|++. ++.+.+|++++|+
T Consensus 152 --~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~ 227 (258)
T PRK14268 152 --ALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFL 227 (258)
T ss_pred --hhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999864 899999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000524 1074 RGGQEIYVGPL 1084 (1444)
Q Consensus 1074 ~gg~~~y~G~~ 1084 (1444)
+ |++++.|+.
T Consensus 228 ~-G~i~~~~~~ 237 (258)
T PRK14268 228 M-GELIEFGQT 237 (258)
T ss_pred C-CEEEEeCCH
Confidence 5 899999875
No 215
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.5e-35 Score=312.12 Aligned_cols=206 Identities=27% Similarity=0.379 Sum_probs=179.5
Q ss_pred CceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCccc----ccceEEEEecCCCCCC
Q 000524 870 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQET----FARISGYCEQNDIHSP 945 (1444)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~----~~~~~gyv~q~~~~~~ 945 (1444)
+...+++|||+++++||++||+||||||||||+|+|+|...+ .+|+|.++|.++.... .+.-++--+|...+|+
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF~ 92 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDITGLPPHRIARLGIARTFQITRLFP 92 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccCCCCHHHHHhccceeecccccccC
Confidence 456899999999999999999999999999999999998764 4899999999876432 3445788899999999
Q ss_pred CCcHHHHHHHHHHhcC--------CCC-CCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhC
Q 000524 946 FVTVYESLLYSAWLRL--------PPE-VDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVAN 1016 (1444)
Q Consensus 946 ~lTv~e~l~f~a~lr~--------~~~-~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~ 1016 (1444)
.+||.||+..++..+. +.. ...++..++..++|+.+||.+.+|...| +||+||||||.|||||+.+
T Consensus 93 ~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa~~ 167 (250)
T COG0411 93 GLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALATQ 167 (250)
T ss_pred CCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHhcC
Confidence 9999999998755331 111 1234455678899999999999999865 6999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1017 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1017 p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|++|+||||.+||.+.....+.+.|+++.++ |.||+++-|+.+ -++.+||||++|+. |+++..|++
T Consensus 168 P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~-~Vm~l~dri~Vl~~-G~~IAeG~P 234 (250)
T COG0411 168 PKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMK-LVMGLADRIVVLNY-GEVIAEGTP 234 (250)
T ss_pred CCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccH-HHhhhccEEEeccC-CcCcccCCH
Confidence 9999999999999999999999999999874 799999999997 49999999999996 899999987
No 216
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=9.7e-35 Score=371.23 Aligned_cols=207 Identities=26% Similarity=0.390 Sum_probs=167.4
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
+++|+|+|++++||+.++|+||||||||||+++|+|.+ |. +|+|.+||+++.+..+ ++.++||+|++.+|. .
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~ 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-G 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-c
Confidence 35899999999999999999999999999999999999 76 8999999999987754 478999999987765 5
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
|++|||.++.. +.+.++..+++...+ .++.++ .|++..||.||+.+
T Consensus 438 TI~eNI~~g~~-------------------------~~~~eei~~al~~a~------l~~~i~--~lp~G~dT~vge~G- 483 (588)
T PRK11174 438 TLRDNVLLGNP-------------------------DASDEQLQQALENAW------VSEFLP--LLPQGLDTPIGDQA- 483 (588)
T ss_pred CHHHHhhcCCC-------------------------CCCHHHHHHHHHHhC------HHHHHH--hcccccccccccCC-
Confidence 99999998631 111111222211111 122222 46777899999875
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
..||||||||++||||++++|++|+||||||+||+.++..|.+.|+++. .++|+|+..|++ ++.+.+|+|++|++|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~TvIiItHrl--~~i~~aD~Iivl~~G 559 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTTLMVTHQL--EDLAQWDQIWVMQDG 559 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEEEEEecCh--HHHHhCCEEEEEeCC
Confidence 4699999999999999999999999999999999999999999998864 356666644443 566789999999999
Q ss_pred eEEEecChhhHHH
Q 000524 402 QIVYQGPRELVLE 414 (1444)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1444)
+++++|+++++.+
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999999864
No 217
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.5e-35 Score=341.13 Aligned_cols=212 Identities=27% Similarity=0.421 Sum_probs=179.9
Q ss_pred CCceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcC
Q 000524 843 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG 922 (1444)
Q Consensus 843 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 922 (1444)
.+..++|+||.+++. +++++|+++||+|++||.+||+|+|||||||++++|.+... .+|+|.|||
T Consensus 348 ~~~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG 412 (591)
T KOG0057|consen 348 FGGSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDG 412 (591)
T ss_pred CCCcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECC
Confidence 345699999999985 23459999999999999999999999999999999998654 379999999
Q ss_pred ccCCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------ccccccc
Q 000524 923 YPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-------LIQSLVG 992 (1444)
Q Consensus 923 ~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg 992 (1444)
+++++ +..|+.+||||||..++ +-||.+|+.|+. .+.+.+ .|-++.+..++.+ -.+|.||
T Consensus 413 ~dik~~~~~SlR~~Ig~VPQd~~LF-ndTIl~NI~YGn-----~sas~e----eV~e~~k~a~~hd~i~~l~~GY~T~VG 482 (591)
T KOG0057|consen 413 QDIKEVSLESLRQSIGVVPQDSVLF-NDTILYNIKYGN-----PSASDE----EVVEACKRAGLHDVISRLPDGYQTLVG 482 (591)
T ss_pred eeHhhhChHHhhhheeEeCCccccc-chhHHHHhhcCC-----CCcCHH----HHHHHHHHcCcHHHHHhccccchhhHh
Confidence 98654 46788999999998887 479999999862 233333 3667777777655 4456677
Q ss_pred CCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEE
Q 000524 993 LPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1072 (1444)
Q Consensus 993 ~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll 1072 (1444)
..| .-|||||||||+||||++++|+|+++|||||.||++|+..+++.+++. ..|+|+|++.|+. ++...||+|++|
T Consensus 483 erG-~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l 558 (591)
T KOG0057|consen 483 ERG-LMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVL 558 (591)
T ss_pred hcc-cccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEE
Confidence 765 469999999999999999999999999999999999999999999994 4589999999995 588999999999
Q ss_pred ecCcEEEEEcCC
Q 000524 1073 KRGGQEIYVGPL 1084 (1444)
Q Consensus 1073 ~~gg~~~y~G~~ 1084 (1444)
++ |++...|+-
T Consensus 559 ~n-G~v~e~gth 569 (591)
T KOG0057|consen 559 DN-GTVKEYGTH 569 (591)
T ss_pred EC-CeeEEeccH
Confidence 96 789999885
No 218
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=332.71 Aligned_cols=214 Identities=24% Similarity=0.352 Sum_probs=180.2
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++. ...+|+|||+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 4 l~~~~l~~~~~~------------~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYSG------------SKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeCC------------CCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 678888877631 2349999999999999999999999999999999999865 35899999998764
Q ss_pred c---ccccceEEEEecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 927 Q---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 927 ~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
. ...++.+||++|++. .+...||.|++.+..... ..+.+...+.++++++.++|.+..++.+ +.||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINL---GLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGG 141 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHH
Confidence 3 234567899999974 334579999998765432 2334444566899999999988777764 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEE
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1081 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~ 1081 (1444)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.
T Consensus 142 q~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~ 219 (277)
T PRK13652 142 EKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAY 219 (277)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999875 899999999986 67889999999986 799999
Q ss_pred cCC
Q 000524 1082 GPL 1084 (1444)
Q Consensus 1082 G~~ 1084 (1444)
|+.
T Consensus 220 g~~ 222 (277)
T PRK13652 220 GTV 222 (277)
T ss_pred CCH
Confidence 985
No 219
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=334.33 Aligned_cols=218 Identities=24% Similarity=0.305 Sum_probs=179.2
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+.... ...+.+|+|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~~~~--------~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 72 (287)
T PRK13641 3 IKFENVDYIYSPGT--------PMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKP--SSGTITIAGYHIT 72 (287)
T ss_pred EEEEEEEEEcCCCC--------CccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEECc
Confidence 67888887764110 0013599999999999999999999999999999999998653 5899999998753
Q ss_pred c-------ccccceEEEEecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000524 927 Q-------ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 997 (1444)
Q Consensus 927 ~-------~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1444)
. ...++.+||++|++. .+..+||.|++.|..... ....++..+.++++++.++|. +..++. ++
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~ 144 (287)
T PRK13641 73 PETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNF---GFSEDEAKEKALKWLKKVGLSEDLISKS-----PF 144 (287)
T ss_pred cccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhhCC-----cc
Confidence 2 123457899999963 233589999998765432 223444556789999999997 566665 45
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|.|||+++|++. ++.+.||++++|++ |+
T Consensus 145 ~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G~ 222 (287)
T PRK13641 145 ELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-GK 222 (287)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999777999999999986 57889999999986 89
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
+++.|+.
T Consensus 223 i~~~g~~ 229 (287)
T PRK13641 223 LIKHASP 229 (287)
T ss_pred EEEeCCH
Confidence 9999875
No 220
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.4e-34 Score=342.93 Aligned_cols=208 Identities=25% Similarity=0.308 Sum_probs=175.6
Q ss_pred ccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCc----cCCCCCc-------cceEEEE
Q 000524 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGH----DMGEFVP-------ERTAAYI 231 (1444)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~----~~~~~~~-------~~~~~yv 231 (1444)
....+|+|+|+.|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+ ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 4567999999999999999999999999999999999999997 999999996 3433221 2469999
Q ss_pred cCCCCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccc
Q 000524 232 SQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVC 311 (1444)
Q Consensus 232 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~ 311 (1444)
+|++.+++.+||+||+.++....+... .+.+..++++++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------------------------------~~~~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------------------------------AERRKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchh
Confidence 999999999999999999865432110 0012245778999999887
Q ss_pred ccccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhh
Q 000524 312 ADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDL 391 (1444)
Q Consensus 312 ~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~ 391 (1444)
.|..++ .|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+..+ ++|+.++|+.+++.++
T Consensus 158 ~~~~~~-----~LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~-~TII~iTHdl~e~~~l 231 (382)
T TIGR03415 158 ADKKPG-----ELSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLN-KTIIFVSHDLDEALKI 231 (382)
T ss_pred hcCChh-----hCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHh
Confidence 776554 6999999999999999999999999999999999999999999998865334 5555588889999999
Q ss_pred cCeEEEEcCCeEEEecChhhHH
Q 000524 392 FDDIILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 392 fD~vilL~~G~iv~~G~~~~~~ 413 (1444)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999998875
No 221
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-34 Score=318.11 Aligned_cols=180 Identities=46% Similarity=0.787 Sum_probs=156.2
Q ss_pred ccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCeecEEEECCccCCCCC--ccceEEEEcCCCCC
Q 000524 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD---SSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNH 237 (1444)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~---~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~ 237 (1444)
.++.+|+|+|+.+++|++++|+|||||||||||++|+|.++ |+ +|+|.++|+++.... .++.++|++|++.+
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~ 94 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVH 94 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEeccccc
Confidence 34579999999999999999999999999999999999998 55 999999999876532 24679999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1444)
++.+||+||+.++.+.. .
T Consensus 95 ~~~~tv~~~l~~~~~~~--------------------------------------------------------------~ 112 (202)
T cd03233 95 FPTLTVRETLDFALRCK--------------------------------------------------------------G 112 (202)
T ss_pred CCCCcHHHHHhhhhhhc--------------------------------------------------------------c
Confidence 99999999998753210 1
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1444)
+..+..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+..+.++|++.||+.+++.+.+|++++
T Consensus 113 ~~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~ 192 (202)
T cd03233 113 NEFVRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLV 192 (202)
T ss_pred ccchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEE
Confidence 12234699999999999999999999999999999999999999999999986544567788788888899999999999
Q ss_pred EcCCeEEEec
Q 000524 398 LSDGQIVYQG 407 (1444)
Q Consensus 398 L~~G~iv~~G 407 (1444)
|++|++++.|
T Consensus 193 l~~G~i~~~g 202 (202)
T cd03233 193 LYEGRQIYYG 202 (202)
T ss_pred EECCEEEecC
Confidence 9999998765
No 222
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.6e-34 Score=337.86 Aligned_cols=214 Identities=22% Similarity=0.250 Sum_probs=175.9
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-------cceEEEEcCCC--
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHD-- 235 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d-- 235 (1444)
..+|+|||+.|++||+++|+|+||||||||+++|+|.++|+...+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 569999999999999999999999999999999999998742348999999999865432 14799999998
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccc
Q 000524 236 NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTM 315 (1444)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1444)
.+.+.+||.+++.+.......... .+...++.++++.+||++..+.
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~~~~---------------------------------~~~~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKGMSK---------------------------------AEAFEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCCH---------------------------------HHHHHHHHHHHHHcCCCChHHH-
Confidence 688999999999876433210000 0112345677889999764332
Q ss_pred ccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeE
Q 000524 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1444)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1444)
. +..++.|||||||||+||+||+.+|++|++||||+|||..++.+|.+.|+++.+. .+++++.++|+...+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~-~g~til~iTHdl~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKRE-FNTAIIMITHDLGVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHH-cCCEEEEEECCHHHHHHhCCEE
Confidence 2 3566789999999999999999999999999999999999999999999998754 3556666889999999999999
Q ss_pred EEEcCCeEEEecChhhHHH
Q 000524 396 ILLSDGQIVYQGPRELVLE 414 (1444)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1444)
++|++|+|++.|+.+++.+
T Consensus 233 ~vm~~G~ive~g~~~~i~~ 251 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVFY 251 (330)
T ss_pred EEEECCEEEEECCHHHHHh
Confidence 9999999999999988853
No 223
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-34 Score=316.56 Aligned_cols=196 Identities=30% Similarity=0.575 Sum_probs=164.6
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYP 924 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 924 (1444)
.+.|+|++|.++.+. +++.+|+|+|+.+++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~~---------~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKGR---------SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccCC---------CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 578999999987431 3457999999999999999999999999999999999986522 468999999987
Q ss_pred CCc--ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 925 KKQ--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 925 ~~~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
... ...++.++|++|++.+++.+||+|++.+.+..+ .+.. ...||+|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~--------------------------~~~~-----~~~LS~G 122 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK--------------------------GNEF-----VRGISGG 122 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc--------------------------cccc-----hhhCCHH
Confidence 643 234567899999999999999999998753211 1222 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEE
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1081 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~ 1081 (1444)
||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++ ++|+|+++|+...++.+.+|++++|++ |++++.
T Consensus 123 e~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~ 201 (202)
T cd03233 123 ERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYY 201 (202)
T ss_pred HHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 678787777654578899999999986 788876
Q ss_pred c
Q 000524 1082 G 1082 (1444)
Q Consensus 1082 G 1082 (1444)
|
T Consensus 202 g 202 (202)
T cd03233 202 G 202 (202)
T ss_pred C
Confidence 5
No 224
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1e-34 Score=324.53 Aligned_cols=203 Identities=29% Similarity=0.410 Sum_probs=170.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1444)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 45999999999999999999999999999999999999987 999999999875421 2356999999998888999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+||+.+..+..+.... +....++++++.+||++..++.++
T Consensus 92 v~~~l~~~~~~~~~~~~----------------------------------~~~~~~~~~l~~~~l~~~~~~~~~----- 132 (220)
T cd03263 92 VREHLRFYARLKGLPKS----------------------------------EIKEEVELLLRVLGLTDKANKRAR----- 132 (220)
T ss_pred HHHHHHHHHHHcCCCHH----------------------------------HHHHHHHHHHHHcCCHHHHhChhh-----
Confidence 99999886543321000 011235677889999877776554
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|++++. + .+|+.++|+.+++.+.+|++++|++|+
T Consensus 133 ~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 133 TLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--G-RSIILTTHSMDEAEALCDRIAIMSDGK 209 (220)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--C-CEEEEEcCCHHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998753 3 556667788888889999999999999
Q ss_pred EEEecChhhH
Q 000524 403 IVYQGPRELV 412 (1444)
Q Consensus 403 iv~~G~~~~~ 412 (1444)
+++.|+.+++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988754
No 225
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.4e-34 Score=323.98 Aligned_cols=203 Identities=24% Similarity=0.397 Sum_probs=167.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 35999999999999999999999999999999999999987 9999999988765432 3569999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHh-CCcccccccccCc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLEVCADTMVGDE 319 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 319 (1444)
+|++||+.++....+ . .+ ....++.+++.+ ++++..++.+
T Consensus 90 ~t~~~~l~~~~~~~~--~-----~~-----------------------------~~~~~~~~l~~~~~l~~~~~~~~--- 130 (222)
T cd03224 90 LTVEENLLLGAYARR--R-----AK-----------------------------RKARLERVYELFPRLKERRKQLA--- 130 (222)
T ss_pred CcHHHHHHHHhhhcC--c-----hh-----------------------------HHHHHHHHHHHHHhhhhhhhCch---
Confidence 999999988653221 0 00 011234456666 4665555444
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++. . +++|+.++|+..++.+++|+|++|+
T Consensus 131 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l~ 206 (222)
T cd03224 131 --GTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-E-GVTILLVEQNARFALEIADRAYVLE 206 (222)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhccEEEEee
Confidence 46999999999999999999999999999999999999999999998864 3 4455557788888999999999999
Q ss_pred CCeEEEecChhhHH
Q 000524 400 DGQIVYQGPRELVL 413 (1444)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1444)
+|++++.|+.+++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (222)
T cd03224 207 RGRVVLEGTAAELL 220 (222)
T ss_pred CCeEEEeCCHHHHh
Confidence 99999999987653
No 226
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.6e-34 Score=322.63 Aligned_cols=198 Identities=30% Similarity=0.432 Sum_probs=166.2
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC--ccceEEEEcCCCCCCCCCCH
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 243 (1444)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999999987 999999999876421 24679999999988999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
+||+.+..+..+... .+....++++++.+||++..+..+ +.
T Consensus 96 ~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 136 (218)
T cd03266 96 RENLEYFAGLYGLKG----------------------------------DELTARLEELADRLGMEELLDRRV-----GG 136 (218)
T ss_pred HHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHHhhhh-----hh
Confidence 999987643321100 001224567889999987776554 46
Q ss_pred cchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000524 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1444)
||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.. .+ .+|+.++|+.+++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-LG-KCILFSTHIMQEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998754 34 4555577888889999999999999999
Q ss_pred EEec
Q 000524 404 VYQG 407 (1444)
Q Consensus 404 v~~G 407 (1444)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 227
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-34 Score=327.72 Aligned_cols=214 Identities=29% Similarity=0.401 Sum_probs=172.1
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------PERTAAYISQHDNHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 45999999999999999999999999999999999999887 999999999876543 135799999999899
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+.+||+||+.++..... .. .... .+..+ ......++.+++.+||.+..++.+
T Consensus 91 ~~~tv~~~l~~~~~~~~--~~---~~~~------~~~~~---------------~~~~~~~~~~l~~~~l~~~~~~~~-- 142 (241)
T cd03256 91 ERLSVLENVLSGRLGRR--ST---WRSL------FGLFP---------------KEEKQRALAALERVGLLDKAYQRA-- 142 (241)
T ss_pred ccCcHHHHHHhhhcccc--hh---hhhh------cccCc---------------HHHHHHHHHHHHHcCChhhhCCCc--
Confidence 99999999987542110 00 0000 00000 001223567789999987666544
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|++++|
T Consensus 143 ---~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tii~~tH~~~~~~~~~d~v~~l 218 (241)
T cd03256 143 ---DQLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEG-ITVIVSLHQVDLAREYADRIVGL 218 (241)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 47999999999999999999999999999999999999999999999865334 45555778888899999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|++++.|+.+++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (241)
T cd03256 219 KDGRIVFDGPPAELT 233 (241)
T ss_pred ECCEEEeecCHHHhh
Confidence 999999999988753
No 228
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=7.7e-35 Score=324.57 Aligned_cols=195 Identities=25% Similarity=0.371 Sum_probs=163.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------PERTAAYISQHDNHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999999987 999999999875432 235799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+.+||+||+.++.+..+... .+....++.+++.+||++..+..+
T Consensus 93 ~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 136 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVPP----------------------------------RDANERVSAALEKVGLEGKAHALP-- 136 (216)
T ss_pred ccccHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh--
Confidence 99999999998754322100 001123567889999987766554
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ .+ ++|+.++|+.+++.+++|+|++|
T Consensus 137 ---~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~vsH~~~~~~~~~d~i~~l 211 (216)
T TIGR00960 137 ---MQLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-RG-TTVLVATHDINLVETYRHRTLTL 211 (216)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999998854 34 45566788888899999999999
Q ss_pred cCCeE
Q 000524 399 SDGQI 403 (1444)
Q Consensus 399 ~~G~i 403 (1444)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99975
No 229
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=328.77 Aligned_cols=213 Identities=25% Similarity=0.353 Sum_probs=178.5
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++ ++.+|+|+|+++++|++++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~ 67 (258)
T PRK13548 3 LEARNLSVRLG-------------GRTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLA 67 (258)
T ss_pred EEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcc
Confidence 56788887763 2469999999999999999999999999999999999865 35899999998754
Q ss_pred c---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000524 927 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 1003 (1444)
Q Consensus 927 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1003 (1444)
. ...++.++|++|++.+++.+||+|++.+..... ....+..++.++++++.++|.+..++.+ ..|||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe 139 (258)
T PRK13548 68 DWSPAELARRRAVLPQHSSLSFPFTVEEVVAMGRAPH---GLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGE 139 (258)
T ss_pred cCCHHHhhhheEEEccCCcCCCCCCHHHHHHhhhccc---CCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHH
Confidence 2 223456899999988878899999998754321 1112233456789999999988777764 5799999
Q ss_pred HHHHHHHHHHh------hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHH-hCCCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 1004 RKRLTIAVELV------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 1004 rkRl~ia~~L~------~~p~illLDEPTsgLD~~s~~~i~~~l~~~~-~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
|||++||++|+ .+|++|+|||||+|||+.++..+.+.|++++ ++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 140 ~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G 217 (258)
T PRK13548 140 QQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-G 217 (258)
T ss_pred HHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-C
Confidence 99999999999 5999999999999999999999999999997 56899999999986 57789999999986 7
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
++++.|+.
T Consensus 218 ~i~~~~~~ 225 (258)
T PRK13548 218 RLVADGTP 225 (258)
T ss_pred EEEeeCCH
Confidence 99998875
No 230
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-34 Score=319.95 Aligned_cols=194 Identities=25% Similarity=0.329 Sum_probs=164.4
Q ss_pred ccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc-cccceEEEEecCCCCCCCCcHHHHHHH
Q 000524 877 GLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE-TFARISGYCEQNDIHSPFVTVYESLLY 955 (1444)
Q Consensus 877 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f 955 (1444)
|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++... ..++.++|++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999865 3489999999876432 234678999999998899999999987
Q ss_pred HHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHH
Q 000524 956 SAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1035 (1444)
Q Consensus 956 ~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~ 1035 (1444)
....+.. . .+..++.++++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||..++.
T Consensus 94 ~~~~~~~--~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~ 165 (211)
T cd03298 94 GLSPGLK--L-TAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRA 165 (211)
T ss_pred ccccccC--c-cHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHH
Confidence 5432211 1 1233456889999999988777763 579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1036 IVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1036 ~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
.+++.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 166 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 166 EMLDLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 999999998754 899999999986 57788999999986 7877653
No 231
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.2e-34 Score=325.36 Aligned_cols=215 Identities=26% Similarity=0.317 Sum_probs=178.2
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++ .+.+|+|+|+++++||+++|+|+|||||||||++|+|...+ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 67 (242)
T TIGR03411 3 LYLEGLSVSFD-------------GFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRP--DEGSVLFGGTDLT 67 (242)
T ss_pred EEEEeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEECCeecC
Confidence 56788877663 24699999999999999999999999999999999998653 4799999998754
Q ss_pred cc----cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCC--C---CCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 927 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP--P---EVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 927 ~~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~--~---~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
.. ..++.++|++|++.+++.+||+||+.+....... . ....+..+..++++++.+++.+..+.. ++
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~ 142 (242)
T TIGR03411 68 GLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRL-----AG 142 (242)
T ss_pred CCCHHHHHhcCeeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCC-----hh
Confidence 31 1234699999999999999999999876432110 0 011223445689999999998877665 35
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.||++++|++ |+
T Consensus 143 ~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~ 219 (242)
T TIGR03411 143 LLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GS 219 (242)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-Ce
Confidence 7999999999999999999999999999999999999999999999875 799999999986 57788999999986 78
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
++..|+.
T Consensus 220 ~~~~~~~ 226 (242)
T TIGR03411 220 VLAEGSL 226 (242)
T ss_pred EEeeCCH
Confidence 9988875
No 232
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-34 Score=321.38 Aligned_cols=198 Identities=25% Similarity=0.383 Sum_probs=166.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCCHH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 45999999999999999999999999999999999999887 9999999988754 2356799999999889999999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccccc
Q 000524 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1444)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1444)
||+.+..+..+... .+....++++++.+||++..++.+ +.|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~L 129 (210)
T cd03269 89 DQLVYLAQLKGLKK----------------------------------EEARRRIDEWLERLELSEYANKRV-----EEL 129 (210)
T ss_pred HHHHHHHHHcCCCh----------------------------------HHHHHHHHHHHHHcCChHHHhCcH-----hhC
Confidence 99988654322100 001123567889999987776554 469
Q ss_pred chhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000524 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1444)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv 404 (1444)
||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+ .+ .+|+.++|+..++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~~-~tii~~sH~~~~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-AG-KTVILSTHQMELVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CC-CEEEEECCCHHHHHHhhhEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998764 34 45566788888899999999999999998
Q ss_pred Eec
Q 000524 405 YQG 407 (1444)
Q Consensus 405 ~~G 407 (1444)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 765
No 233
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-34 Score=326.80 Aligned_cols=206 Identities=26% Similarity=0.387 Sum_probs=171.2
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 45999999999999999999999999999999999999987 9999999998765332 35789999999999999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcc--cccccccCc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV--CADTMVGDE 319 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~--~~dt~vg~~ 319 (1444)
||+||+.++.+..+... .+....++++++.+||++ ..++
T Consensus 91 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~l~l~~~~~~~~----- 131 (242)
T cd03295 91 TVEENIALVPKLLKWPK----------------------------------EKIRERADELLALVGLDPAEFADR----- 131 (242)
T ss_pred cHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCCcHHHHhc-----
Confidence 99999998654321100 001123567789999985 4444
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
.++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ ++|+.++|+.+++.+++|+|++|+
T Consensus 132 ~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g-~tvii~sH~~~~~~~~~d~i~~l~ 210 (242)
T cd03295 132 YPHELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELG-KTIVFVTHDIDEAFRLADRIAIMK 210 (242)
T ss_pred ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEecCHHHHHHhCCEEEEEE
Confidence 3457999999999999999999999999999999999999999999999865334 455557777888899999999999
Q ss_pred CCeEEEecChhhHH
Q 000524 400 DGQIVYQGPRELVL 413 (1444)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1444)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999887663
No 234
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=8.2e-33 Score=358.93 Aligned_cols=209 Identities=27% Similarity=0.386 Sum_probs=178.8
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++|+||+|+|+. +++.+|+|+|++|+|||++||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 450 ~~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 516 (686)
T TIGR03797 450 GAIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETP--ESGSVFYDGQD 516 (686)
T ss_pred ceEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEE
Confidence 36999999999852 124699999999999999999999999999999999998763 48999999998
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 994 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 994 (1444)
+++ ..+++.+|||+|++.+++ -|++||+.++. + .+ ++.++++++..++.+.. |+.+|..
T Consensus 517 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~----~--~~----~e~i~~al~~a~l~~~i~~lp~G~dt~ige~ 585 (686)
T TIGR03797 517 LAGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGA----P--LT----LDEAWEAARMAGLAEDIRAMPMGMHTVISEG 585 (686)
T ss_pred cCcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCC----C--CC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 754 457788999999998886 69999997641 1 22 23478888888887644 5667654
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
..+||||||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|+|++|++
T Consensus 586 -G~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~ 659 (686)
T TIGR03797 586 -GGTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA 659 (686)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999886 689999999985 5678999999986
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 660 -G~iv~~G~~ 668 (686)
T TIGR03797 660 -GRVVQQGTY 668 (686)
T ss_pred -CEEEEECCH
Confidence 899999985
No 235
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-34 Score=325.76 Aligned_cols=219 Identities=21% Similarity=0.297 Sum_probs=176.4
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCC---CCceEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRK---TGGYITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~---~~~~~~G~i~i~g 922 (1444)
.++++|+++.+. .+.+|+|+|+++++||+++|+|+||||||||+++|+|.. .+.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWYG-------------DFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEEC-------------CEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 467888887763 246999999999999999999999999999999999952 2112479999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
.++.. ...++.++|++|++.+++ .|+.||+.+....+.. ...+...+.++++++.++|.+....... ..+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 145 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGV--KDNAFIRQRVEETLKGAALWDEVKDKLK-ESAF 145 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCC--CcHHHHHHHHHHHHHHcCCCcchhhhhh-CCcc
Confidence 87642 134567999999988776 6999999886544311 1223344568899999998653222111 1246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.||++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14245 146 ALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GE 222 (250)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 5899999999986 57789999999985 79
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
+++.|+.
T Consensus 223 ~~~~~~~ 229 (250)
T PRK14245 223 MVEYDDT 229 (250)
T ss_pred EEEECCH
Confidence 9999975
No 236
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=331.98 Aligned_cols=214 Identities=26% Similarity=0.327 Sum_probs=180.6
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 6 l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i~ 72 (279)
T PRK13635 6 IRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVLS 72 (279)
T ss_pred EEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECC
Confidence 788999887631 123599999999999999999999999999999999998653 4899999998764
Q ss_pred cc---cccceEEEEecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 927 QE---TFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 927 ~~---~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
.. ..++.+||++|++. .++..||.||+.+..... ....++..+.++++++.++|.+..++.+ ..||||
T Consensus 73 ~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G 144 (279)
T PRK13635 73 EETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENI---GVPREEMVERVDQALRQVGMEDFLNREP-----HRLSGG 144 (279)
T ss_pred cCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhC---CCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHH
Confidence 32 24567999999973 566789999998865433 1233444566899999999998877764 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEE
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1081 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~ 1081 (1444)
||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||+++|++. ++ ..+|++++|++ |++++.
T Consensus 145 ~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~-~~~d~i~~l~~-G~i~~~ 221 (279)
T PRK13635 145 QKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EA-AQADRVIVMNK-GEILEE 221 (279)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HH-HcCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999999876 899999999986 35 46999999985 799999
Q ss_pred cCC
Q 000524 1082 GPL 1084 (1444)
Q Consensus 1082 G~~ 1084 (1444)
|+.
T Consensus 222 g~~ 224 (279)
T PRK13635 222 GTP 224 (279)
T ss_pred CCH
Confidence 985
No 237
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-34 Score=313.94 Aligned_cols=190 Identities=57% Similarity=0.936 Sum_probs=162.2
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|+++.++... .++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~~~~---------~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~ 73 (192)
T cd03232 3 VLTWKNLNYTVPVKG---------GKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPL 73 (192)
T ss_pred EEEEeeeEEEecCCC---------CceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEeh
Confidence 467889988874210 12469999999999999999999999999999999999743224589999999876
Q ss_pred CcccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000524 926 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 1005 (1444)
Q Consensus 926 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1005 (1444)
. ..+++.++|++|++.+++.+|++|++.+...++ .|||||||
T Consensus 74 ~-~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------------------------~LSgGe~q 115 (192)
T cd03232 74 D-KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR-------------------------------------GLSVEQRK 115 (192)
T ss_pred H-HHhhhceEEecccCccccCCcHHHHHHHHHHHh-------------------------------------cCCHHHhH
Confidence 5 344567899999998889999999998643110 49999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1006 Rl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
|++||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++.++.+.+|++++|+++|++++.|
T Consensus 116 rv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 116 RLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred HHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 99999999999999999999999999999999999999887799999999998744778899999998658998875
No 238
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-34 Score=327.21 Aligned_cols=217 Identities=18% Similarity=0.250 Sum_probs=179.1
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 922 (1444)
.+.++|+++.++ .+.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~i~~v~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g 70 (258)
T PRK14241 4 RIDVKDLNIYYG-------------SFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDG 70 (258)
T ss_pred cEEEeeEEEEEC-------------CEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECC
Confidence 377889888773 236999999999999999999999999999999999976432 2589999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 993 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1444)
.++.. ..+++.++|++|+..+++.+||+||+.+....+. ....+..++.++++++.+++.+ ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 145 (258)
T PRK14241 71 EDLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNG--VRNKKDLDELVEKSLRGANLWNEVKDRLDKP--- 145 (258)
T ss_pred EeccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhHhhCC---
Confidence 87531 2345679999999999999999999988654331 1123344556889999999853 23332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe
Q 000524 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1073 (1444)
Q Consensus 994 ~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~ 1073 (1444)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~ 221 (258)
T PRK14241 146 --GGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFN 221 (258)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 467999999999999999999999999999999999999999999999864 689999999986 5778999999997
Q ss_pred c-----CcEEEEEcCC
Q 000524 1074 R-----GGQEIYVGPL 1084 (1444)
Q Consensus 1074 ~-----gg~~~y~G~~ 1084 (1444)
+ .|++++.|+.
T Consensus 222 ~~~~~~~g~i~~~~~~ 237 (258)
T PRK14241 222 LEATGKPGRLVEIDDT 237 (258)
T ss_pred cccCCCCceEEecCCH
Confidence 2 4899999875
No 239
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-34 Score=326.11 Aligned_cols=220 Identities=23% Similarity=0.307 Sum_probs=177.5
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCC--C-ceEEEEEEEc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNITIS 921 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~ 921 (1444)
..+.++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+.+|+|.++
T Consensus 5 ~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 71 (253)
T PRK14242 5 PKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLD 71 (253)
T ss_pred cEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEEC
Confidence 3588999988773 2359999999999999999999999999999999999642 1 1358999999
Q ss_pred CccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000524 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 996 (1444)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1444)
|.++.. ...++.++|++|++.+++ .||+||+.+....+. ....+...+.++++++.+++.+....... ...
T Consensus 72 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~ 147 (253)
T PRK14242 72 GENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNG--VKDKAYLAERVERSLRHAALWDEVKDRLH-ESA 147 (253)
T ss_pred CEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCc
Confidence 987642 123567999999988887 599999988754331 11223334568889999998643222221 124
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |
T Consensus 148 ~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~tH~~~-~~~~~~d~v~~l~~-G 224 (253)
T PRK14242 148 LGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK-ARYTIIIVTHNMQ-QAARVSDVTAFFYM-G 224 (253)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCeEEEEEecHH-HHHHhCCEEEEEEC-C
Confidence 6799999999999999999999999999999999999999999999985 4799999999986 57788999999986 7
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
+++..|+.
T Consensus 225 ~i~~~g~~ 232 (253)
T PRK14242 225 KLIEVGPT 232 (253)
T ss_pred EEEEeCCH
Confidence 89988875
No 240
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.2e-34 Score=323.46 Aligned_cols=195 Identities=26% Similarity=0.377 Sum_probs=161.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-------cceEEEEcCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDNH 237 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999987 9999999998765431 3579999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1444)
++.+||+||+.++....+... .+....++.+++.+||++..++.+
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 138 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------------------------------KERRERAEELLERVGLGDRLNHYP- 138 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhcCh-
Confidence 999999999998754322100 001123567889999987666554
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1444)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+. +|+.++|+.+++. .+|++++
T Consensus 139 ----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~-tii~~sH~~~~~~-~~d~v~~ 212 (218)
T cd03255 139 ----SELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGT-TIVVVTHDPELAE-YADRIIE 212 (218)
T ss_pred ----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCC-eEEEEECCHHHHh-hhcEEEE
Confidence 469999999999999999999999999999999999999999999998653344 4555677777775 9999999
Q ss_pred EcCCeE
Q 000524 398 LSDGQI 403 (1444)
Q Consensus 398 L~~G~i 403 (1444)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 241
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-34 Score=327.17 Aligned_cols=225 Identities=22% Similarity=0.265 Sum_probs=182.7
Q ss_pred cCCCCceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC---ceEEE
Q 000524 840 LPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITG 916 (1444)
Q Consensus 840 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G 916 (1444)
+|..+..+.++|+++.++ .+.+|+|+|+++++||++||+|+|||||||||++|+|...+ .+.+|
T Consensus 14 ~~~~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G 80 (267)
T PRK14237 14 FPEEEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTG 80 (267)
T ss_pred cCCCCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcce
Confidence 344445789999998773 24699999999999999999999999999999999997642 13589
Q ss_pred EEEEcCccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc
Q 000524 917 NITISGYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLV 991 (1444)
Q Consensus 917 ~i~i~g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~v 991 (1444)
+|.++|.+... ...++.++|++|++.+++ .||+||+.+..... .....+..++.++++++.++|.+..+...
T Consensus 81 ~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~--~~~~~~~~~~~~~~~l~~~~l~~~i~~~~ 157 (267)
T PRK14237 81 QILYRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERA--GVKDKKVLDEIVETSLKQAALWDQVKDDL 157 (267)
T ss_pred EEEECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhc--CCCCHHHHHHHHHHHHHHcCCCchhhhhh
Confidence 99999987642 123567899999988877 69999998864322 11223344566889999999964322222
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEE
Q 000524 992 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFL 1071 (1444)
Q Consensus 992 g~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~l 1071 (1444)
.. ....||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++. ++.|||+++|+++ ++.+.||++++
T Consensus 158 ~~-~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~ 234 (267)
T PRK14237 158 HK-SALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAF 234 (267)
T ss_pred cC-CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEE
Confidence 22 256899999999999999999999999999999999999999999999985 4799999999986 58889999999
Q ss_pred EecCcEEEEEcCC
Q 000524 1072 MKRGGQEIYVGPL 1084 (1444)
Q Consensus 1072 l~~gg~~~y~G~~ 1084 (1444)
|++ |++++.|+.
T Consensus 235 l~~-G~i~~~g~~ 246 (267)
T PRK14237 235 FYL-GDLIEYDKT 246 (267)
T ss_pred EEC-CEEEEeCCH
Confidence 985 899999986
No 242
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.7e-34 Score=322.35 Aligned_cols=204 Identities=34% Similarity=0.536 Sum_probs=165.0
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC---CCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD---SSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGE 240 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~---~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 240 (1444)
.+++|+|+|+.+++||+++|+||||||||||+++|+|.++ |+ +|+|.++|+++.....++.++|++|++.+++.
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 95 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPG 95 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcC
Confidence 3569999999999999999999999999999999999998 66 99999999887643345779999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHH-HHHHhCCcccccccccCc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDY-YLKVLGLEVCADTMVGDE 319 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~-~l~~lgL~~~~dt~vg~~ 319 (1444)
+||+||+.|+......... ... ......+. .++.+++++..++.
T Consensus 96 ~tv~enl~~~~~~~~~~~~---~~~----------------------------~~~~~~~~~~l~~~~l~~~~~~~---- 140 (226)
T cd03234 96 LTVRETLTYTAILRLPRKS---SDA----------------------------IRKKRVEDVLLRDLALTRIGGNL---- 140 (226)
T ss_pred CcHHHHHHHHHHhhccccc---chH----------------------------HHHHHHHHHHHHhhcchhhhccc----
Confidence 9999999987543211000 000 00011233 68888887665544
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++.|++..++.+.+|++++|+
T Consensus 141 -~~~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~~tiii~sh~~~~~~~~~~d~i~~l~ 218 (226)
T cd03234 141 -VKGISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RNRIVILTIHQPRSDLFRLFDRILLLS 218 (226)
T ss_pred -ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEecCCCHHHHHhCCEEEEEe
Confidence 457999999999999999999999999999999999999999999998764 355666654444468999999999999
Q ss_pred CCeEEEec
Q 000524 400 DGQIVYQG 407 (1444)
Q Consensus 400 ~G~iv~~G 407 (1444)
+|+++++|
T Consensus 219 ~G~i~~~g 226 (226)
T cd03234 219 SGEIVYSG 226 (226)
T ss_pred CCEEEecC
Confidence 99999876
No 243
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-34 Score=332.06 Aligned_cols=205 Identities=20% Similarity=0.286 Sum_probs=169.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC-------ccceEEEEcCCC--
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHD-- 235 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d-- 235 (1444)
+++|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 45999999999999999999999999999999999999998 999999999875421 245799999986
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc-ccccc
Q 000524 236 NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADT 314 (1444)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1444)
.+++ .||.||+.|+....+... .+....++++++.+||+ +..++
T Consensus 97 ~l~~-~tv~e~i~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~ 141 (286)
T PRK13646 97 QLFE-DTVEREIIFGPKNFKMNL----------------------------------DEVKNYAHRLLMDLGFSRDVMSQ 141 (286)
T ss_pred ccch-hhHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhC
Confidence 3444 699999998653221100 01122456788999996 55554
Q ss_pred cccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCe
Q 000524 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1444)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1444)
. ++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++... .+++|+.++|..+++.+.+|+
T Consensus 142 ~-----~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~-~g~tvl~vtH~~~~~~~~~dr 215 (286)
T PRK13646 142 S-----PFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTD-ENKTIILVSHDMNEVARYADE 215 (286)
T ss_pred C-----cccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCHHHHHHhCCE
Confidence 4 4579999999999999999999999999999999999999999999998653 345666678888899999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 000524 395 IILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1444)
|++|++|++++.|+++++.
T Consensus 216 i~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 216 VIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999988764
No 244
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.9e-34 Score=321.41 Aligned_cols=212 Identities=26% Similarity=0.389 Sum_probs=180.0
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
.++|+++.+. .+.+|+|+|++++|||+++|+|+||||||||+++|+|...+ ..|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~~ 66 (232)
T cd03300 2 ELENVSKFYG-------------GFVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDITN 66 (232)
T ss_pred EEEeEEEEeC-------------CeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCc
Confidence 5677777663 24699999999999999999999999999999999998653 47999999987643
Q ss_pred c-cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000524 928 E-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 1006 (1444)
Q Consensus 928 ~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkR 1006 (1444)
. ..++.++|++|++..++.+|+.|++.+....+. .......+.++++++.+++.+..++.+ ..||+|||||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~~nl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (232)
T cd03300 67 LPPHKRPVNTVFQNYALFPHLTVFENIAFGLRLKK---LPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQR 138 (232)
T ss_pred CChhhcceEEEecccccCCCCcHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHH
Confidence 2 234678999999998888999999987654431 223334456789999999988777663 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1007 l~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 139 VAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999999999999999999999765 899999999986 57889999999986 799888864
No 245
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.3e-34 Score=328.91 Aligned_cols=220 Identities=27% Similarity=0.353 Sum_probs=181.0
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYP 924 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 924 (1444)
-+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTFN-------------QHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEeC-------------CeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 377888887763 246999999999999999999999999999999999986543 236999999987
Q ss_pred CCc--------ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHcCCcccccccc
Q 000524 925 KKQ--------ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-----PEVDSETRKMFIEEVMELVELKPLIQSLV 991 (1444)
Q Consensus 925 ~~~--------~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-----~~~~~~~~~~~v~~~l~~l~L~~~~~~~v 991 (1444)
... ...++.++|++|++.+++.+||.|++.+......+ .....+..+..++++++.+++.+..+..+
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 12345689999999989999999999875321100 01112334456899999999987777653
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEE
Q 000524 992 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELF 1070 (1444)
Q Consensus 992 g~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ 1070 (1444)
..||||||||++|||+|+.+|++|+|||||+|||..++..+.+.|++++++ |+|||+++|++. ++.+.+|+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 579999999999999999999999999999999999999999999999764 899999999986 5788999999
Q ss_pred EEecCcEEEEEcCCC
Q 000524 1071 LMKRGGQEIYVGPLG 1085 (1444)
Q Consensus 1071 ll~~gg~~~y~G~~~ 1085 (1444)
+|++ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9985 7899998864
No 246
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-34 Score=327.63 Aligned_cols=217 Identities=25% Similarity=0.337 Sum_probs=179.7
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+. ++.+|+|+|+.+++||+++|+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (255)
T PRK11231 3 LRTENLTVGYG-------------TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPIS 67 (255)
T ss_pred EEEEeEEEEEC-------------CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhH
Confidence 56788887663 2469999999999999999999999999999999999765 34799999998753
Q ss_pred c---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 927 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 927 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
. ...++.++|++|+...++.+|+.|++.++...... .....+...+.++++++.++|.+..++. +..||||
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G 142 (255)
T PRK11231 68 MLSSRQLARRLALLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRR-----LTDLSGG 142 (255)
T ss_pred HCCHHHHhhheEEecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCC-----cccCCHH
Confidence 2 23345689999998888889999999875211000 0111123345678999999998877765 3579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 143 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 220 (255)
T PRK11231 143 QRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQG 220 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEc
Confidence 999999999999999999999999999999999999999998777999999999986 68889999999986 7899998
Q ss_pred CCC
Q 000524 1083 PLG 1085 (1444)
Q Consensus 1083 ~~~ 1085 (1444)
+..
T Consensus 221 ~~~ 223 (255)
T PRK11231 221 TPE 223 (255)
T ss_pred CHH
Confidence 864
No 247
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.9e-35 Score=318.07 Aligned_cols=222 Identities=26% Similarity=0.347 Sum_probs=192.5
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-------cceEEEEcCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDN 236 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1444)
...-++|+|+.++.||+..|||-||||||||+++|.++.+|+ .|+|.++|.++...+. ++.++.|+|+-.
T Consensus 40 ~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~Fa 116 (386)
T COG4175 40 LVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFA 116 (386)
T ss_pred cEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhc
Confidence 345689999999999999999999999999999999999998 9999999999876543 367999999999
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1444)
++|..||.||..|+.+.+|+... +.+.+..+.|+..||+..++.++
T Consensus 117 LlPhrtVl~Nv~fGLev~Gv~~~----------------------------------er~~~a~~~l~~VgL~~~~~~yp 162 (386)
T COG4175 117 LLPHRTVLENVAFGLEVQGVPKA----------------------------------EREERALEALELVGLEGYADKYP 162 (386)
T ss_pred cccchhHhhhhhcceeecCCCHH----------------------------------HHHHHHHHHHHHcCchhhhhcCc
Confidence 99999999999999999886421 12335677899999999888655
Q ss_pred cCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEE
Q 000524 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1444)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1444)
++||||+||||.|||||+.+|+|||||||+|+|||--+.++.+-|.++-+..++| |+.++|+.+|.+++-|||.
T Consensus 163 -----~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KT-IvFitHDLdEAlriG~rIa 236 (386)
T COG4175 163 -----NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKT-IVFITHDLDEALRIGDRIA 236 (386)
T ss_pred -----ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCe-EEEEecCHHHHHhccceEE
Confidence 4799999999999999999999999999999999999999999887776655555 5568999999999999999
Q ss_pred EEcCCeEEEecChhhHHHHHHhcCCCCCCCCChhHHHHhh
Q 000524 397 LLSDGQIVYQGPRELVLEFFESMGFKCPKRKGVADFLQEV 436 (1444)
Q Consensus 397 lL~~G~iv~~G~~~~~~~~F~~~Gf~cp~~~~~adfl~~v 436 (1444)
+|.+|+||..|+++|++. .|...-+++|..++
T Consensus 237 imkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 237 IMKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred EecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 999999999999999974 45555566676654
No 248
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-34 Score=326.87 Aligned_cols=218 Identities=21% Similarity=0.267 Sum_probs=178.9
Q ss_pred CCceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCC--C-ceEEEEEE
Q 000524 843 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNIT 919 (1444)
Q Consensus 843 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~ 919 (1444)
....+.++|+++.++ ...+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.
T Consensus 10 ~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~ 76 (260)
T PRK10744 10 APSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEIL 76 (260)
T ss_pred CCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEE
Confidence 345688999988774 2359999999999999999999999999999999999753 1 13589999
Q ss_pred EcCccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----ccccc
Q 000524 920 ISGYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSL 990 (1444)
Q Consensus 920 i~g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~ 990 (1444)
++|.++.. ..+++.++|++|+..+++ .|++||+.+....+. ..+.+..++.++++++.+++.+ ..+..
T Consensus 77 ~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 153 (260)
T PRK10744 77 LDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFE--KLSRAEMDERVEWALTKAALWNEVKDKLHQS 153 (260)
T ss_pred ECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcC--CCCHHHHHHHHHHHHHHcCCChhhHHHHhcC
Confidence 99987632 234567999999988777 899999987654321 1233344456889999999853 23332
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEE
Q 000524 991 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELF 1070 (1444)
Q Consensus 991 vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ 1070 (1444)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||+++|++. ++.+.+|+++
T Consensus 154 -----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~ 226 (260)
T PRK10744 154 -----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTA 226 (260)
T ss_pred -----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEE
Confidence 46799999999999999999999999999999999999999999999985 4789999999986 5778899999
Q ss_pred EEecCcEEEEEcCC
Q 000524 1071 LMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1071 ll~~gg~~~y~G~~ 1084 (1444)
+|++ |+++..|+.
T Consensus 227 ~l~~-G~i~~~g~~ 239 (260)
T PRK10744 227 FMYL-GELIEFGNT 239 (260)
T ss_pred EEEC-CEEEEeCCH
Confidence 9985 899999875
No 249
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-34 Score=328.85 Aligned_cols=219 Identities=23% Similarity=0.290 Sum_probs=181.9
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..+.++|+++.++ .+.+|+|+|+.+++||+++|+||||||||||+++|+|...+ .+|+|.++|.+
T Consensus 6 ~~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~ 70 (265)
T PRK10253 6 ARLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTP--AHGHVWLDGEH 70 (265)
T ss_pred cEEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEE
Confidence 3588899988874 24699999999999999999999999999999999998653 47999999987
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1000 (1444)
+.. ...++.++|++|++..++..|++|++.+...-..+ .....+..++.++++++.++|.+..++. +..||
T Consensus 71 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 145 (265)
T PRK10253 71 IQHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLS 145 (265)
T ss_pred hhhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCC
Confidence 543 22345689999999888889999999765211100 0001123345688999999998777765 45799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEE
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1079 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~ 1079 (1444)
||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. ++.+.+|++++|++ |+++
T Consensus 146 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~ 223 (265)
T PRK10253 146 GGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIV 223 (265)
T ss_pred hHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999764 899999999986 58899999999985 7999
Q ss_pred EEcCCC
Q 000524 1080 YVGPLG 1085 (1444)
Q Consensus 1080 y~G~~~ 1085 (1444)
+.|+..
T Consensus 224 ~~g~~~ 229 (265)
T PRK10253 224 AQGAPK 229 (265)
T ss_pred EeCCHH
Confidence 999863
No 250
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.1e-34 Score=337.08 Aligned_cols=208 Identities=22% Similarity=0.256 Sum_probs=173.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc------cceEEEEcCCC--C
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHD--N 236 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1444)
..+|+|||+.|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|+++.+... ++.++||+|++ .
T Consensus 34 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~ 110 (331)
T PRK15079 34 LKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLAS 110 (331)
T ss_pred eEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchhh
Confidence 56999999999999999999999999999999999999987 9999999998865432 35799999997 5
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc-cccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTM 315 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1444)
++|.+||.||+.+..+....+. .+ .+....++++++.+||. +..++
T Consensus 111 l~p~~tv~~~i~~~l~~~~~~~--------~~------------------------~~~~~~~~~~l~~vgl~~~~~~~- 157 (331)
T PRK15079 111 LNPRMTIGEIIAEPLRTYHPKL--------SR------------------------QEVKDRVKAMMLKVGLLPNLINR- 157 (331)
T ss_pred cCCCCCHHHHHHHHHHHhccCC--------CH------------------------HHHHHHHHHHHHHcCCChHHhcC-
Confidence 7889999999998654321000 00 01123456788999994 34444
Q ss_pred ccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeE
Q 000524 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1444)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1444)
.+..|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+.. +++++.++|+...+.+++|+|
T Consensus 158 ----~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-~~til~iTHdl~~~~~~~dri 232 (331)
T PRK15079 158 ----YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREM-GLSLIFIAHDLAVVKHISDRV 232 (331)
T ss_pred ----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEE
Confidence 455799999999999999999999999999999999999999999999986533 456666899999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000524 396 ILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1444)
++|++|++++.|+.+++.
T Consensus 233 ~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 233 LVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEECCEEEEEcCHHHHH
Confidence 999999999999998875
No 251
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-34 Score=329.70 Aligned_cols=213 Identities=24% Similarity=0.360 Sum_probs=177.0
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i~ 66 (271)
T PRK13638 2 LATSDLWFRYQ-------------DEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRP--QKGAVLWQGKPLD 66 (271)
T ss_pred eEEEEEEEEcC-------------CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCC--CccEEEECCEEcc
Confidence 46788887763 23599999999999999999999999999999999997653 4899999998763
Q ss_pred c-----ccccceEEEEecCCCC-CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000524 927 Q-----ETFARISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 927 ~-----~~~~~~~gyv~q~~~~-~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1000 (1444)
. ...++.++|++|++.. ....|+.|++.+....+ ....++..+.++++++.++|.+..++. +..||
T Consensus 67 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS 138 (271)
T PRK13638 67 YSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNL---GVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLS 138 (271)
T ss_pred cccCCHHHHHhheEEEeeChhhccccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCC
Confidence 1 1234678999999753 34568999998764332 123334445688999999998877665 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. ++.+.+|++++|++ |++++
T Consensus 139 gG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 216 (271)
T PRK13638 139 HGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILT 216 (271)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 57788999999986 79999
Q ss_pred EcCC
Q 000524 1081 VGPL 1084 (1444)
Q Consensus 1081 ~G~~ 1084 (1444)
.|+.
T Consensus 217 ~g~~ 220 (271)
T PRK13638 217 HGAP 220 (271)
T ss_pred eCCH
Confidence 9875
No 252
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-34 Score=330.07 Aligned_cols=203 Identities=25% Similarity=0.332 Sum_probs=169.7
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCC-CCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGEM 241 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1444)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++..
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 4899999999999999999999999999999999999987 9999999998765432 357999999863 45678
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
||+||+.|+.+..+... .+....++.+++.+||.+..+..+
T Consensus 96 tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~L~~~~~~~~----- 136 (274)
T PRK13647 96 TVWDDVAFGPVNMGLDK----------------------------------DEVERRVEEALKAVRMWDFRDKPP----- 136 (274)
T ss_pred cHHHHHHhhHHHcCCCH----------------------------------HHHHHHHHHHHHHCCCHHHhcCCh-----
Confidence 99999998643221100 001224567899999987776655
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|++++. . +.+|+.++|..+++.+.+|+|++|++|
T Consensus 137 ~~LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-g~tili~tH~~~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 137 YHLSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-Q-GKTVIVATHDVDLAAEWADQVIVLKEG 214 (274)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 46999999999999999999999999999999999999999999999864 3 445566788888899999999999999
Q ss_pred eEEEecChhhH
Q 000524 402 QIVYQGPRELV 412 (1444)
Q Consensus 402 ~iv~~G~~~~~ 412 (1444)
++++.|+.+++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998654
No 253
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.2e-34 Score=343.92 Aligned_cols=209 Identities=25% Similarity=0.417 Sum_probs=175.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
+++|+|+|+.+++||+++|+||||||||||||+|+|.++|. +|+|.++|+++..... ++.++||+|++.+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 46999999999999999999999999999999999999997 9999999998876432 46799999999888999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
||+||+.++..-.. + +... . . .+.+.+++++++.+||.+..++.+
T Consensus 93 tv~e~v~~~~~~~~-~-~~~~-------------~--~-------------~~~~~~v~~~le~vgl~~~~~~~~----- 137 (402)
T PRK09536 93 DVRQVVEMGRTPHR-S-RFDT-------------W--T-------------ETDRAAVERAMERTGVAQFADRPV----- 137 (402)
T ss_pred CHHHHHHhccchhc-c-cccC-------------C--C-------------HHHHHHHHHHHHHcCCchhhcCCh-----
Confidence 99999998642110 0 0000 0 0 011235678899999988777654
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
+.|||||||||.|||||+.+|++|+|||||+|||+.++.++.+.|+++++ .+ ++|+.++|+.+++.+++|++++|++|
T Consensus 138 ~~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g-~TIIivsHdl~~~~~~adrii~l~~G 215 (402)
T PRK09536 138 TSLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DG-KTAVAAIHDLDLAARYCDELVLLADG 215 (402)
T ss_pred hhCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cC-CEEEEEECCHHHHHHhCCEEEEEECC
Confidence 47999999999999999999999999999999999999999999999875 44 45666788899999999999999999
Q ss_pred eEEEecChhhHH
Q 000524 402 QIVYQGPRELVL 413 (1444)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1444)
++++.|++++++
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999998764
No 254
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.7e-34 Score=327.78 Aligned_cols=213 Identities=26% Similarity=0.351 Sum_probs=170.9
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------PERTAAYISQHDNHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1444)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 45999999999999999999999999999999999999987 999999998876432 245699999999899
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+.+||+||+.++..... ... .... +.. ..+...+++++++.+||.+..+..+
T Consensus 92 ~~~tv~~~l~~~~~~~~--~~~---~~~~------~~~---------------~~~~~~~~~~~l~~~~l~~~~~~~~-- 143 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYK--PTW---RSLL------GRF---------------SEEDKERALSALERVGLADKAYQRA-- 143 (243)
T ss_pred ccccHHHHHhhcccccc--cch---hhhh------ccc---------------cHHHHHHHHHHHHHcCcHhhhcCCc--
Confidence 99999999987532110 000 0000 000 0001234567889999987666544
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
..|||||||||+||+||+.+|++++|||||+|||+.+...+.+.|+++.+..+ ++|+.++|+.+++.+++|++++|
T Consensus 144 ---~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~tH~~~~~~~~~d~v~~l 219 (243)
T TIGR02315 144 ---DQLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDG-ITVIINLHQVDLAKKYADRIVGL 219 (243)
T ss_pred ---ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHhcCeEEEE
Confidence 47999999999999999999999999999999999999999999998865334 45555778888888999999999
Q ss_pred cCCeEEEecChhhH
Q 000524 399 SDGQIVYQGPRELV 412 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~ 412 (1444)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999988765
No 255
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-34 Score=335.37 Aligned_cols=213 Identities=21% Similarity=0.242 Sum_probs=172.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CeecEEEECCccCCCCCc-------cceEEEEcCCC-
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL-KVSGRVTYNGHDMGEFVP-------ERTAAYISQHD- 235 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~-~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 235 (1444)
.++|+|||+.|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|+++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999987422 138999999998865432 13699999997
Q ss_pred -CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccc
Q 000524 236 -NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1444)
Q Consensus 236 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1444)
.+.|.+||.+++....+...... ..+...+++++++.+||++..+
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~~~---------------------------------~~~~~~~~~~~L~~~gL~~~~~- 145 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQGGN---------------------------------KKTRRQRAIDLLNQVGIPDPAS- 145 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcCCC---------------------------------HHHHHHHHHHHHHHCCCCChHH-
Confidence 47899999999876543211000 0011234677899999975221
Q ss_pred cccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCe
Q 000524 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1444)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1444)
+-+...+.|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+.. +++++.++|+...+.+++|+
T Consensus 146 -~l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~-g~til~iTHdl~~~~~~adr 223 (326)
T PRK11022 146 -RLDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKE-NMALVLITHDLALVAEAAHK 223 (326)
T ss_pred -HHhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCE
Confidence 1124456899999999999999999999999999999999999999999999987543 45666688999999999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 000524 395 IILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1444)
|++|++|++++.|+.+++.
T Consensus 224 i~vm~~G~ive~g~~~~~~ 242 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIF 242 (326)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999998875
No 256
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-34 Score=328.02 Aligned_cols=218 Identities=28% Similarity=0.373 Sum_probs=180.6
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|+++.++ ++.+|+|+||.+++||+++|+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 11 ~l~i~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRVP-------------GRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEEC-------------CEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 478999987763 2469999999999999999999999999999999999765 3479999999875
Q ss_pred Cc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000524 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 926 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1001 (1444)
.. ..+++.++|++|+..+++.+|+.|++.+....... ........++.++++++.+++.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 32 23456789999998888889999999875321110 00111223456889999999987777664 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
|||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 899999999986 57789999999985 78999
Q ss_pred EcCCC
Q 000524 1081 VGPLG 1085 (1444)
Q Consensus 1081 ~G~~~ 1085 (1444)
.|+..
T Consensus 229 ~~~~~ 233 (265)
T PRK10575 229 QGTPA 233 (265)
T ss_pred ecCHH
Confidence 98753
No 257
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-34 Score=333.53 Aligned_cols=205 Identities=23% Similarity=0.351 Sum_probs=168.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCC----------------------
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF---------------------- 222 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~---------------------- 222 (1444)
..+|+|+|+.|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.+....
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35899999999999999999999999999999999999997 89999998764210
Q ss_pred -----CccceEEEEcCCC-CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhh
Q 000524 223 -----VPERTAAYISQHD-NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEAN 296 (1444)
Q Consensus 223 -----~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~ 296 (1444)
..++.++||+|++ ..+...||+|||.|+....+... .+..
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~----------------------------------~~~~ 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSK----------------------------------EEAK 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCH----------------------------------HHHH
Confidence 1245799999985 34556799999998754322100 0112
Q ss_pred HHHHHHHHHhCCc-ccccccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCC
Q 000524 297 VITDYYLKVLGLE-VCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSG 375 (1444)
Q Consensus 297 ~~~~~~l~~lgL~-~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~ 375 (1444)
.+++.+++.+||+ +..+.. +..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~-g 215 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-Q-G 215 (305)
T ss_pred HHHHHHHHHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-C-C
Confidence 3467789999996 455544 457999999999999999999999999999999999999999999998863 3 4
Q ss_pred EEEEEEecCchhHHhhcCeEEEEcCCeEEEecChhhHH
Q 000524 376 TAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 376 t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~ 413 (1444)
++|+.++|+.+++.+.+|+|++|++|++++.|+++++.
T Consensus 216 ~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 216 KTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred CEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 55666888889999999999999999999999998864
No 258
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.2e-34 Score=319.00 Aligned_cols=195 Identities=25% Similarity=0.369 Sum_probs=165.0
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCC-CccceEEEEcCCCCCCCCCCH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF-VPERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-~~~~~~~yv~Q~d~~~~~lTV 243 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 46999999999999999999999999999999999999887 99999999887542 124579999999988999999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
+||+.+.....+. .+..++.+++.+||++..++.+ +.
T Consensus 90 ~e~l~~~~~~~~~--------------------------------------~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (208)
T cd03268 90 RENLRLLARLLGI--------------------------------------RKKRIDEVLDVVGLKDSAKKKV-----KG 126 (208)
T ss_pred HHHHHHHHHhcCC--------------------------------------cHHHHHHHHHHcCCHHHHhhhH-----hh
Confidence 9999886432110 0113466788999987766554 46
Q ss_pred cchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000524 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1444)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++.+ .+. +++.++|+.+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~-tii~~tH~~~~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QGI-TVLISSHLLSEIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCC-EEEEEcCCHHHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998764 344 455577888888899999999999999
Q ss_pred EEec
Q 000524 404 VYQG 407 (1444)
Q Consensus 404 v~~G 407 (1444)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 259
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=6.1e-34 Score=326.92 Aligned_cols=223 Identities=23% Similarity=0.295 Sum_probs=179.0
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++.....+ ..+.+.+|+|+|+++++||++||+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~~~~----~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 76 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFG----AKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLY 76 (265)
T ss_pred EEEEeEEEEeccCcccc----ccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcc
Confidence 67888887774210000 0113569999999999999999999999999999999999865 35899999998764
Q ss_pred cc------cccceEEEEecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000524 927 QE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 997 (1444)
Q Consensus 927 ~~------~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1444)
.. ..++.++|++|++ .+.+.+||+|++.+...... .......++.++++++.+++. ...+.. +.
T Consensus 77 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 149 (265)
T TIGR02769 77 QLDRKQRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLT--SLDESEQKARIAELLDMVGLRSEDADKL-----PR 149 (265)
T ss_pred ccCHHHHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCChhhhhCC-----hh
Confidence 31 1345799999996 45678999999976543211 122333455688999999996 555554 35
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. .+.+.+|++++|++ |
T Consensus 150 ~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G 227 (265)
T TIGR02769 150 QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-G 227 (265)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999986 57778999999985 8
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
++++.|+.
T Consensus 228 ~i~~~g~~ 235 (265)
T TIGR02769 228 QIVEECDV 235 (265)
T ss_pred EEEEECCH
Confidence 99999886
No 260
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-34 Score=320.31 Aligned_cols=215 Identities=26% Similarity=0.332 Sum_probs=180.3
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC-C-CCCeecEEEECCccCCCCCc-------cceEEEEcCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD-S-SLKVSGRVTYNGHDMGEFVP-------ERTAAYISQH 234 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~-~-~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~ 234 (1444)
...+++|||+.+++||+++|+|.|||||||+.++|.|+++ + ....+|+|.++|.++-.+.. .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999998 4 33567899999998765543 2579999999
Q ss_pred C--CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccc
Q 000524 235 D--NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCA 312 (1444)
Q Consensus 235 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1444)
+ .+.|.+||.+.+.-..+.+.... ...+...++.++|+.+||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------------------------------~~~ea~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------------------------------SKKEAKERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------------------------------hhHHHHHHHHHHHHHcCCCCHH
Confidence 6 67899999998876554321100 0112334567789999998642
Q ss_pred cccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhc
Q 000524 313 DTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLF 392 (1444)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~f 392 (1444)
. +-+....+|||||||||.||.||+.+|++|+.|||||+||..++.+|++.|+++.+ ..++.++.|+|+..-+.+++
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~-e~~~aiilITHDl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQR-EKGTALILITHDLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHH-hcCCEEEEEeCCHHHHHHhc
Confidence 2 33567789999999999999999999999999999999999999999999999987 45778888999999999999
Q ss_pred CeEEEEcCCeEEEecChhhHH
Q 000524 393 DDIILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 393 D~vilL~~G~iv~~G~~~~~~ 413 (1444)
|+|+||+.|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999999874
No 261
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=8e-34 Score=319.11 Aligned_cols=213 Identities=24% Similarity=0.361 Sum_probs=175.7
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
-+.++|+++.++... ....+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~~---------~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQGE---------HELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDG--SSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCCC---------cceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CCeeEEECCEEc
Confidence 478899988764210 113599999999999999999999999999999999998653 489999999876
Q ss_pred Cccc------c-cceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000524 926 KQET------F-ARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 998 (1444)
Q Consensus 926 ~~~~------~-~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1444)
.... . ++.++|++|++.+++.+|+.|++.+....+. .......+.++++++.+++.+..+..+ ..
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 146 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRG---ESSRQSRNGAKALLEQLGLGKRLDHLP-----AQ 146 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 4311 1 2568999999988899999999987654331 223344567899999999988777653 57
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 999 lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++ |.|||+++|++. .+ +.+|++++|++ |+
T Consensus 147 LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~ 223 (228)
T PRK10584 147 LSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQ 223 (228)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999765 899999999986 34 56999999986 67
Q ss_pred EEE
Q 000524 1078 EIY 1080 (1444)
Q Consensus 1078 ~~y 1080 (1444)
++.
T Consensus 224 i~~ 226 (228)
T PRK10584 224 LQE 226 (228)
T ss_pred EEe
Confidence 754
No 262
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-34 Score=341.73 Aligned_cols=202 Identities=24% Similarity=0.295 Sum_probs=174.8
Q ss_pred ceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc---c----ccceEEEEecCCCC
Q 000524 871 KLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE---T----FARISGYCEQNDIH 943 (1444)
Q Consensus 871 ~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~---~----~~~~~gyv~q~~~~ 943 (1444)
...+|+|+||+|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++... . .++.+||++|+..+
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p--~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEP--TRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCC--CCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 34689999999999999999999999999999999998653 479999999876431 1 13568999999999
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEe
Q 000524 944 SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMD 1023 (1444)
Q Consensus 944 ~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLD 1023 (1444)
++.+||+||+.|....+. ...++..+.++++++.++|.+..++.+ +.||||||||++|||+|+.+|++|+||
T Consensus 118 ~~~~Tv~enl~~~~~~~~---~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLLD 189 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAG---INAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLMD 189 (400)
T ss_pred CCCCCHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 999999999998765432 233444567889999999998877763 579999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1024 EPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1024 EPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|||+|||+.++..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~ 249 (400)
T PRK10070 190 EAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTP 249 (400)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCH
Confidence 99999999999999999999875 4899999999986 67889999999986 799998875
No 263
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-34 Score=343.49 Aligned_cols=213 Identities=26% Similarity=0.434 Sum_probs=180.4
Q ss_pred CCceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcC
Q 000524 843 EPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISG 922 (1444)
Q Consensus 843 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g 922 (1444)
.+..+..+|++|.++. .+++++|+|++++||+.+||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~~------------g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYPD------------GKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecCC------------CCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 3456677799988852 23799999999999999999999999999999999998764 589999999
Q ss_pred ccCC---cccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccc------ccccC
Q 000524 923 YPKK---QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQ------SLVGL 993 (1444)
Q Consensus 923 ~~~~---~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~------~~vg~ 993 (1444)
.+.. ...+++.++||+|++.+++ -|++||+.++. + +.+ ++.+.++++..+|.+..+ +.+|.
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~-gTireNi~l~~----~-~~s----~e~i~~al~~a~l~~~v~~p~GLdt~ige 452 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFA-GTIRENILLAR----P-DAS----DEEIIAALDQAGLLEFVPKPDGLDTVIGE 452 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCcccc-ccHHHHhhccC----C-cCC----HHHHHHHHHHhcHHHhhcCCCcccchhcc
Confidence 8754 3568899999999998876 69999998752 1 122 334788899988877654 44554
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe
Q 000524 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1073 (1444)
Q Consensus 994 ~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~ 1073 (1444)
+.++|||||+|||++||||+++++++++||||++||.++++.|++.|.++++ ++||++++|++. ....+|+|++|+
T Consensus 453 -~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld 528 (559)
T COG4988 453 -GGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLD 528 (559)
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEec
Confidence 4579999999999999999999999999999999999999999999999986 599999999974 567789999998
Q ss_pred cCcEEEEEcCC
Q 000524 1074 RGGQEIYVGPL 1084 (1444)
Q Consensus 1074 ~gg~~~y~G~~ 1084 (1444)
+ |+++..|..
T Consensus 529 ~-G~l~~~g~~ 538 (559)
T COG4988 529 N-GRLVEQGTH 538 (559)
T ss_pred C-CceeccCCH
Confidence 5 899999875
No 264
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=7e-34 Score=321.12 Aligned_cols=212 Identities=25% Similarity=0.375 Sum_probs=179.9
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
+++|+++.++ .+.+|+|+|+++.+||+++|+||||||||||+++|+|...+ ..|+|.++|.++..
T Consensus 2 ~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~i~g~~~~~ 66 (237)
T TIGR00968 2 EIANISKRFG-------------SFQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQP--DSGRIRLNGQDATR 66 (237)
T ss_pred EEEEEEEEEC-------------CeeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCc
Confidence 5677777663 24699999999999999999999999999999999998653 48999999987653
Q ss_pred c-cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000524 928 E-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 1006 (1444)
Q Consensus 928 ~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkR 1006 (1444)
. ..++.++|++|++..++..|+.||+.+....+. .......+.++++++.+++.+..++.+ +.||+||+||
T Consensus 67 ~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr 138 (237)
T TIGR00968 67 VHARDRKIGFVFQHYALFKHLTVRDNIAFGLEIRK---HPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQR 138 (237)
T ss_pred CChhhcCEEEEecChhhccCCcHHHHHHhHHHhcC---CCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHH
Confidence 2 234678999999988889999999987654331 223333456789999999987777653 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1007 l~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
++||++|+.+|++++|||||+|||..++..+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 139 l~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 139 VALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999999999999998775 899999999986 57888999999985 799999885
No 265
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=5e-34 Score=322.36 Aligned_cols=206 Identities=26% Similarity=0.364 Sum_probs=169.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc--cceEEEEcCCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP--ERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lT 242 (1444)
+.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 45999999999999999999999999999999999999987 9999999988754322 257999999988888999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+||+.+.....+... .+....++.+++.+||++..++.++
T Consensus 91 ~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~----- 131 (236)
T TIGR03864 91 VRQNLRYHAALHGLSR----------------------------------AEARERIAALLARLGLAERADDKVR----- 131 (236)
T ss_pred HHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhcCChh-----
Confidence 9999987643321100 0011235667889999877776554
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++++..+.| |+.++|..+++. .+|++++|++|+
T Consensus 132 ~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~t-iii~sH~~~~~~-~~d~i~~l~~G~ 209 (236)
T TIGR03864 132 ELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLS-VLWATHLVDEIE-ADDRLVVLHRGR 209 (236)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCE-EEEEecChhhHh-hCCEEEEEeCCe
Confidence 699999999999999999999999999999999999999999999986533444 555677777775 499999999999
Q ss_pred EEEecChhhHHH
Q 000524 403 IVYQGPRELVLE 414 (1444)
Q Consensus 403 iv~~G~~~~~~~ 414 (1444)
+++.|+.+++.+
T Consensus 210 i~~~~~~~~~~~ 221 (236)
T TIGR03864 210 VLADGAAAELRG 221 (236)
T ss_pred EEEeCCHHHHHH
Confidence 999999877653
No 266
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-34 Score=330.01 Aligned_cols=217 Identities=23% Similarity=0.334 Sum_probs=176.7
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++... ...+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 3 l~~~~l~~~~~~~~--------~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~ 72 (280)
T PRK13649 3 INLQNVSYTYQAGT--------PFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVP--TQGSVRVDDTLIT 72 (280)
T ss_pred EEEEEEEEEcCCCC--------ccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEcc
Confidence 67888888774210 0013599999999999999999999999999999999998653 5899999998754
Q ss_pred c-------ccccceEEEEecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000524 927 Q-------ETFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGV 996 (1444)
Q Consensus 927 ~-------~~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 996 (1444)
. ..+++.++|++|++ .+++ .||+|++.+..... ....+...+.++++++.++|.+ ..+.. +
T Consensus 73 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~-~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~ 143 (280)
T PRK13649 73 STSKNKDIKQIRKKVGLVFQFPESQLFE-ETVLKDVAFGPQNF---GVSQEEAEALAREKLALVGISESLFEKN-----P 143 (280)
T ss_pred ccccccCHHHHHhheEEEeeChhhhhcc-ccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhhhhCC-----c
Confidence 2 22456789999996 3444 69999998764332 1223344456789999999973 44554 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |
T Consensus 144 ~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G 221 (280)
T PRK13649 144 FELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-G 221 (280)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-C
Confidence 579999999999999999999999999999999999999999999999777899999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
++++.|+.
T Consensus 222 ~i~~~g~~ 229 (280)
T PRK13649 222 KLVLSGKP 229 (280)
T ss_pred EEEEeCCH
Confidence 99988875
No 267
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=6.4e-34 Score=320.01 Aligned_cols=201 Identities=27% Similarity=0.330 Sum_probs=162.2
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC------ccceEEEEcCCC--CC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------PERTAAYISQHD--NH 237 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 237 (1444)
++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 5999999999999999999999999999999999999987 999999999876543 235799999998 46
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc-ccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTMV 316 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~v 316 (1444)
++.+||+||+.+.....+..... + ......+.+++.+||. ...+..+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~~---------~-----------------------~~~~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSKK---------E-----------------------ARKEAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcHH---------H-----------------------HHHHHHHHHHHHCCCChhHhhCCc
Confidence 67899999998865432110000 0 0001124567888885 4445443
Q ss_pred cCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEE
Q 000524 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1444)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1444)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++...+. +|+.++|+.+++.+++|+|+
T Consensus 144 -----~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~-tii~~sH~~~~~~~~~d~i~ 217 (228)
T cd03257 144 -----HELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGL-TLLFITHDLGVVAKIADRVA 217 (228)
T ss_pred -----hhcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHhcCeEE
Confidence 469999999999999999999999999999999999999999999998653244 55557777888888999999
Q ss_pred EEcCCeEEEec
Q 000524 397 LLSDGQIVYQG 407 (1444)
Q Consensus 397 lL~~G~iv~~G 407 (1444)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 268
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-33 Score=322.14 Aligned_cols=220 Identities=20% Similarity=0.287 Sum_probs=178.5
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 922 (1444)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 4 ~l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (252)
T PRK14256 4 KVKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDD 70 (252)
T ss_pred EEEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECC
Confidence 478889988763 2359999999999999999999999999999999999753 21 2479999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
.++.. ..+++.++|++|+..+++.+|++||+.+...... .....+.++.++++++.+++......... ..+.
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14256 71 TDIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNG--RVNRSEADEIVESSLKRVALWDEVKDRLK-SNAM 147 (252)
T ss_pred EEcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCcC
Confidence 87632 2346679999999998999999999987543321 11223334567899999998642211111 1246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.||++++|++ |+
T Consensus 148 ~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14256 148 ELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999975 689999999986 57789999999985 89
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14256 225 LVECGET 231 (252)
T ss_pred EEEeCCH
Confidence 9999985
No 269
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-34 Score=328.21 Aligned_cols=214 Identities=28% Similarity=0.351 Sum_probs=178.3
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+. +++.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.
T Consensus 2 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~~ 67 (275)
T PRK13639 2 LETRDLKYSYP------------DGTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKP--TSGEVLIKGEPIK 67 (275)
T ss_pred EEEEEEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEECc
Confidence 56788887763 123599999999999999999999999999999999997653 4899999998763
Q ss_pred c-----ccccceEEEEecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000524 927 Q-----ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 927 ~-----~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1000 (1444)
. ...++.++|++|++. .+...||.|++.+..... ....++..+.+.++++.++|.+..++.+ +.||
T Consensus 68 ~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~i~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS 139 (275)
T PRK13639 68 YDKKSLLEVRKTVGIVFQNPDDQLFAPTVEEDVAFGPLNL---GLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLS 139 (275)
T ss_pred cccchHHHHHhheEEEeeChhhhhccccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCC
Confidence 1 123567999999963 333479999998764321 1233444556889999999988877764 5799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
||||||+.||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||+++|++. ++.+.||++++|++ |++++
T Consensus 140 ~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~ 217 (275)
T PRK13639 140 GGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIK 217 (275)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 99999999999999999999999999999999999999999999877999999999986 57788999999986 79999
Q ss_pred EcCC
Q 000524 1081 VGPL 1084 (1444)
Q Consensus 1081 ~G~~ 1084 (1444)
.|+.
T Consensus 218 ~g~~ 221 (275)
T PRK13639 218 EGTP 221 (275)
T ss_pred eCCH
Confidence 9875
No 270
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4.4e-34 Score=321.65 Aligned_cols=210 Identities=25% Similarity=0.317 Sum_probs=173.7
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~ 66 (230)
T TIGR03410 2 EVSNLNVYYG-------------QSHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITK 66 (230)
T ss_pred EEEeEEEEeC-------------CeEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCC
Confidence 5677777663 2469999999999999999999999999999999999865 348999999987543
Q ss_pred c----cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcC-CcccccccccCCCCCcCCHH
Q 000524 928 E----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVE-LKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 928 ~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~-L~~~~~~~vg~~~~~~lSgG 1002 (1444)
. ..++.++|++|+..+++.+|+.|++.+....+. .. ..+.++++++.++ +.+..++. +..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~---~~---~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G 135 (230)
T TIGR03410 67 LPPHERARAGIAYVPQGREIFPRLTVEENLLTGLAALP---RR---SRKIPDEIYELFPVLKEMLGRR-----GGDLSGG 135 (230)
T ss_pred CCHHHHHHhCeEEeccCCcccCCCcHHHHHHHHHHhcC---cc---hHHHHHHHHHHHHhHHHHhhCC-----hhhCCHH
Confidence 1 124568999999999999999999987654321 11 1223567788776 55555554 4579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEE
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1081 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~ 1081 (1444)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..
T Consensus 136 ~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~ 213 (230)
T TIGR03410 136 QQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVAS 213 (230)
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEE
Confidence 999999999999999999999999999999999999999998864 899999999986 57778999999985 799999
Q ss_pred cCCC
Q 000524 1082 GPLG 1085 (1444)
Q Consensus 1082 G~~~ 1085 (1444)
|+..
T Consensus 214 ~~~~ 217 (230)
T TIGR03410 214 GAGD 217 (230)
T ss_pred CCHH
Confidence 8863
No 271
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=3.4e-34 Score=322.03 Aligned_cols=198 Identities=24% Similarity=0.375 Sum_probs=167.3
Q ss_pred eeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEEecCCCCCCCCcHHHHHH
Q 000524 875 LNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYESLL 954 (1444)
Q Consensus 875 L~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~ 954 (1444)
|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.... ...+|++|++.+++.+||.|++.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999865 35899999998764322 12489999999999999999998
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000524 955 YSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1034 (1444)
Q Consensus 955 f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~ 1034 (1444)
+......+ ....++.++.+.++++.++|.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 77 ~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~ 150 (230)
T TIGR01184 77 LAVDRVLP-DLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTR 150 (230)
T ss_pred HHHHhccc-CCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 75321111 2233344556889999999988777653 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1035 AIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1035 ~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 151 ~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 151 GNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 9999999998765 899999999986 57888999999986 788888764
No 272
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=5.1e-34 Score=326.15 Aligned_cols=217 Identities=27% Similarity=0.389 Sum_probs=178.7
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++ ++.+|+|+|+.+++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 66 (256)
T TIGR03873 2 LRLSRVSWSAG-------------GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRP--DAGTVDLAGVDLH 66 (256)
T ss_pred ceEEeEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCCEEEECCEEcc
Confidence 56778877663 24699999999999999999999999999999999997653 4799999998754
Q ss_pred c---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 927 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 927 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
. ...++.++|++|++..++.+||+|++.+....... ......+..+.++++++.+++.+..++.+ ..||||
T Consensus 67 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G 141 (256)
T TIGR03873 67 GLSRRARARRVALVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGG 141 (256)
T ss_pred cCCHHHHhhheEEecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHH
Confidence 3 22345689999998777889999999875211000 00111223456889999999987777653 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
||||++||++|+.+|++++|||||+|||+.+...+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 142 ~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 219 (256)
T TIGR03873 142 ERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAG 219 (256)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEec
Confidence 999999999999999999999999999999999999999999877899999999997 67789999999986 7899998
Q ss_pred CCC
Q 000524 1083 PLG 1085 (1444)
Q Consensus 1083 ~~~ 1085 (1444)
+..
T Consensus 220 ~~~ 222 (256)
T TIGR03873 220 PPR 222 (256)
T ss_pred CHH
Confidence 863
No 273
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-34 Score=326.15 Aligned_cols=220 Identities=23% Similarity=0.269 Sum_probs=177.9
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 922 (1444)
.+.++|+++.+. .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 588999988873 24699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
.++.. ..+++.++|++|++..++. ||.||+.+....+.. ........+.++++++.+++.+....... ..+.
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~-~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 162 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGL-ARSKAELDEIVETSLRKAGLWEEVKDRLH-EPGT 162 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHcCCchhhhHHhh-CCcc
Confidence 87642 2345678999999887774 999999887543321 11223334567899999999642211111 1246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ .+.+.+|++++|++ |+
T Consensus 163 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~~-G~ 239 (267)
T PRK14235 163 GLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFHL-GN 239 (267)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 789999999986 57788999999985 79
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
++..|+.
T Consensus 240 i~~~g~~ 246 (267)
T PRK14235 240 LVEVGDT 246 (267)
T ss_pred EEEeCCH
Confidence 9999875
No 274
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-34 Score=293.20 Aligned_cols=201 Identities=25% Similarity=0.388 Sum_probs=178.2
Q ss_pred eEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEEecCCCCCCCCcHHH
Q 000524 872 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYE 951 (1444)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e 951 (1444)
..+|+|||+.|.+||.++++||||||||||||+++|..++ ..|+|.+||.+++...- ..|.|+|++.+.|.+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P--~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTP--SRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCc--ccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 3589999999999999999999999999999999998774 58999999998764322 2489999999999999999
Q ss_pred HHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCH
Q 000524 952 SLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1031 (1444)
Q Consensus 952 ~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~ 1031 (1444)
|+.|+..++ .+++.+|.+.+.+.+..+||.+..+.. +-.||||||||+.|||||+.+|+.|+||||.+.||+
T Consensus 94 NvafgL~l~---Gi~k~~R~~~a~q~l~~VgL~~~~~~~-----i~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa 165 (259)
T COG4525 94 NVAFGLQLR---GIEKAQRREIAHQMLALVGLEGAEHKY-----IWQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDA 165 (259)
T ss_pred HHHHHHHhc---CCCHHHHHHHHHHHHHHhCcccccccc-----eEeecchHHHHHHHHHHhhcCcceEeecCchhhHHH
Confidence 999998887 467888999999999999999988776 457999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcceEEEEecC-cEEEEEcCCC
Q 000524 1032 RAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRG-GQEIYVGPLG 1085 (1444)
Q Consensus 1032 ~s~~~i~~~l~~~~~-~g~tvi~t~Hqps~~i~~~fD~v~ll~~g-g~~~y~G~~~ 1085 (1444)
-+++.++++|-++.+ +|+.++++||+.. |..-+++++++|+.| ||++..=|++
T Consensus 166 ~tRe~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 166 LTREQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCCC
Confidence 999999999999875 4999999999986 455577999999865 6888777763
No 275
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=6.5e-34 Score=318.35 Aligned_cols=196 Identities=24% Similarity=0.347 Sum_probs=160.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-------cceEEEEcCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDNH 237 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 237 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999987 9999999998765432 1469999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1444)
++.+||+||+.+......... .+....++++++.+||++..+..+
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 139 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKSV----------------------------------KEAKERAYEMLEKVGLEHRINHRP- 139 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh-
Confidence 889999999998643221000 001123466888999987666544
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1444)
+.|||||||||+||++|+.+|++++|||||+|||..++..+.+.|+++++..+.|+ +.++|+..++. .+|+|++
T Consensus 140 ----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~ti-i~~tH~~~~~~-~~d~v~~ 213 (221)
T TIGR02211 140 ----SELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSF-LVVTHDLELAK-KLDRVLE 213 (221)
T ss_pred ----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEE-EEEeCCHHHHh-hcCEEEE
Confidence 46999999999999999999999999999999999999999999998865334454 55667666664 4799999
Q ss_pred EcCCeEE
Q 000524 398 LSDGQIV 404 (1444)
Q Consensus 398 L~~G~iv 404 (1444)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 276
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=332.18 Aligned_cols=223 Identities=18% Similarity=0.227 Sum_probs=179.9
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC-c-eEEEEEEEcCcc
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG-G-YITGNITISGYP 924 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~-~-~~~G~i~i~g~~ 924 (1444)
++++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|...+ + +.+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 6788888777421 1125699999999999999999999999999999999997642 2 358999999987
Q ss_pred CCcc---c----ccceEEEEecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000524 925 KKQE---T----FARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPG 995 (1444)
Q Consensus 925 ~~~~---~----~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 995 (1444)
+... . .++.++|++|++ .+.|.+|+.+++........ ....++.++.+.++++.+||.+..+.+ ...
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~--~~~~~~~~~~~~~~L~~~gL~~~~~~l--~~~ 150 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQ--GGNKKTRRQRAIDLLNQVGIPDPASRL--DVY 150 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHCCCCChHHHH--hCC
Confidence 6431 1 123689999998 46788999988766543321 123445566789999999997532211 112
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 996 ~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
...||||||||++||+||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|+|++||+.+ .+.+.+|++++|+.
T Consensus 151 p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~vm~~ 229 (326)
T PRK11022 151 PHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIVMYA 229 (326)
T ss_pred chhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC
Confidence 468999999999999999999999999999999999999999999999976 4899999999986 47788999999985
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 230 -G~ive~g~~ 238 (326)
T PRK11022 230 -GQVVETGKA 238 (326)
T ss_pred -CEEEEECCH
Confidence 899999985
No 277
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=7.1e-34 Score=315.99 Aligned_cols=198 Identities=22% Similarity=0.293 Sum_probs=167.4
Q ss_pred EeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc-ccccceEEEEecCCCCCCCCcHHHH
Q 000524 874 LLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-ETFARISGYCEQNDIHSPFVTVYES 952 (1444)
Q Consensus 874 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-~~~~~~~gyv~q~~~~~~~lTv~e~ 952 (1444)
+++|+|+.+++||+++|+||||||||||+++|+|...+ .+|+|.++|.++.. ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEP--ASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 45799999999999999999999999999999998653 48999999987643 2345679999999999999999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000524 953 LLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1032 (1444)
Q Consensus 953 l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~ 1032 (1444)
+.+....+. . .....++.++++++.++|.+..++. ++.||||||||++||++|+.+|++++|||||+|||..
T Consensus 91 ~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~ 162 (213)
T TIGR01277 91 IGLGLHPGL--K-LNAEQQEKVVDAAQQVGIADYLDRL-----PEQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPL 162 (213)
T ss_pred HHhHhhccC--C-ccHHHHHHHHHHHHHcCcHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHH
Confidence 986532211 1 1122344578899999998877776 3579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcC
Q 000524 1033 AAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGP 1083 (1444)
Q Consensus 1033 s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~ 1083 (1444)
++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |+++..|.
T Consensus 163 ~~~~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 163 LREEMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999998765 899999999986 57788999999985 79888764
No 278
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-34 Score=322.42 Aligned_cols=219 Identities=21% Similarity=0.271 Sum_probs=176.5
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC-ceEEEEEEEcCccC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG-GYITGNITISGYPK 925 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~-~~~~G~i~i~g~~~ 925 (1444)
+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|.++
T Consensus 3 ~~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i 69 (246)
T PRK14269 3 AKTTNLNLFYG-------------KKQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDV 69 (246)
T ss_pred eeeeeeEEEEC-------------CEeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEec
Confidence 56778887763 24699999999999999999999999999999999997532 24589999999876
Q ss_pred Cc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 926 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
.. ..+++.++|++|++.+++ .|++||+.+....+... ......++.++++++.++|.+....... ...+.||||
T Consensus 70 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~eni~~~~~~~~~~-~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G 146 (246)
T PRK14269 70 KNQDVVALRKNVGMVFQQPNVFV-KSIYENISYAPKLHGMI-KNKDEEEALVVDCLQKVGLFEEVKDKLK-QNALALSGG 146 (246)
T ss_pred ccCCHHHHhhhEEEEecCCcccc-ccHHHHhhhHHhhcCcc-cChHHHHHHHHHHHHHcCCChhhhHHhc-CCcccCCHH
Confidence 43 234567899999988887 69999998865443210 1122334557899999999543211111 124679999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |++++.|
T Consensus 147 ~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g 223 (246)
T PRK14269 147 QQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFG 223 (246)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEEC
Confidence 99999999999999999999999999999999999999999864 899999999986 57789999999985 8999998
Q ss_pred CC
Q 000524 1083 PL 1084 (1444)
Q Consensus 1083 ~~ 1084 (1444)
+.
T Consensus 224 ~~ 225 (246)
T PRK14269 224 ES 225 (246)
T ss_pred CH
Confidence 75
No 279
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.3e-34 Score=317.99 Aligned_cols=192 Identities=26% Similarity=0.352 Sum_probs=160.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCC-CCCCCCH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDN-HIGEMTV 243 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 243 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 45999999999999999999999999999999999999987 9999999988754333467999999974 3556899
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
+||+.++....+ + ....++++++.+||++..++.+ ..
T Consensus 90 ~e~l~~~~~~~~------------------------~--------------~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (205)
T cd03226 90 REELLLGLKELD------------------------A--------------GNEQAETVLKDLDLYALKERHP-----LS 126 (205)
T ss_pred HHHHhhhhhhcC------------------------c--------------cHHHHHHHHHHcCCchhcCCCc-----hh
Confidence 999987543210 0 0113466789999987777655 46
Q ss_pred cchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000524 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1444)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+. +|+.++|..+++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~-tii~~sH~~~~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-QGK-AVIVITHDYEFLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-CCC-EEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999998864 344 455577888888899999999999997
Q ss_pred E
Q 000524 404 V 404 (1444)
Q Consensus 404 v 404 (1444)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 280
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-34 Score=326.71 Aligned_cols=215 Identities=23% Similarity=0.319 Sum_probs=179.9
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|+++.++. +.+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 7 ~l~~~nl~~~~~~-----------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYPN-----------SENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKP--QSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcCC-----------CCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEec
Confidence 4789999887631 124599999999999999999999999999999999998653 489999999886
Q ss_pred Cc---ccccceEEEEecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000524 926 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 926 ~~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1001 (1444)
.. ..+++.++|++|++. .++.+||+||+.+..... ....+.....++++++.++|.+..++.+ +.|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 145 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENK---KVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSG 145 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHc---CCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCH
Confidence 43 234567899999974 567789999998764322 1233444556889999999988777764 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
|||||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|++. ++ ..+|++++|++ |+++.
T Consensus 146 G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~i~~ 222 (271)
T PRK13632 146 GQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE-GKLIA 222 (271)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999766 589999999986 34 57999999985 79998
Q ss_pred EcCC
Q 000524 1081 VGPL 1084 (1444)
Q Consensus 1081 ~G~~ 1084 (1444)
.|+.
T Consensus 223 ~g~~ 226 (271)
T PRK13632 223 QGKP 226 (271)
T ss_pred ecCH
Confidence 8875
No 281
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.2e-33 Score=332.27 Aligned_cols=224 Identities=20% Similarity=0.288 Sum_probs=182.6
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc-eEEEEEEEcCcc
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-YITGNITISGYP 924 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~~~G~i~i~g~~ 924 (1444)
-+.++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|...+. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 47899998777431 12356999999999999999999999999999999999976532 238999999987
Q ss_pred CCcc---c---cc-ceEEEEecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCC
Q 000524 925 KKQE---T---FA-RISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPG 995 (1444)
Q Consensus 925 ~~~~---~---~~-~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~ 995 (1444)
+... . ++ +.++|++|++ .+.|.+|+.+++.+...... ....++..+++.++++.++|.+..+.. + ..
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~--~~~~~~~~~~~~~~L~~vgL~~~~~~~-~-~~ 158 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHK--GMSKAEAFEESVRMLDAVKMPEARKRM-K-MY 158 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCCChHHHh-c-CC
Confidence 6431 1 22 4799999998 57899999999876544332 234445556788999999997543221 1 23
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 996 ~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
...||||||||++||+||+.+|++|++||||+|||..++..|++.|+++.++ |.|+|+++|+++ .+.+.+|++++|+.
T Consensus 159 p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~ 237 (330)
T PRK09473 159 PHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA 237 (330)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC
Confidence 5689999999999999999999999999999999999999999999999765 899999999986 56778999999985
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 238 -G~ive~g~~ 246 (330)
T PRK09473 238 -GRTMEYGNA 246 (330)
T ss_pred -CEEEEECCH
Confidence 899999986
No 282
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.9e-34 Score=334.20 Aligned_cols=217 Identities=21% Similarity=0.416 Sum_probs=173.1
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCC-------------------Ccc
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF-------------------VPE 225 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-------------------~~~ 225 (1444)
.++|+|+|+.|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 35999999999999999999999999999999999999997 99999999887542 124
Q ss_pred ceEEEEcCCCC-CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHH
Q 000524 226 RTAAYISQHDN-HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLK 304 (1444)
Q Consensus 226 ~~~~yv~Q~d~-~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~ 304 (1444)
+.++||+|++. .+...||+||+.|+....+.. . .+...+++++++
T Consensus 116 ~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~ 161 (320)
T PRK13631 116 RRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVK-K---------------------------------SEAKKLAKFYLN 161 (320)
T ss_pred hcEEEEEECchhccccchHHHHHHhhHHhcCCC-H---------------------------------HHHHHHHHHHHH
Confidence 67999999862 333469999998864322110 0 001124567889
Q ss_pred HhCCc-ccccccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEec
Q 000524 305 VLGLE-VCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQ 383 (1444)
Q Consensus 305 ~lgL~-~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q 383 (1444)
.+||+ ...+. .+..|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|
T Consensus 162 ~~gL~~~~~~~-----~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~-g~TiiivtH 234 (320)
T PRK13631 162 KMGLDDSYLER-----SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-N-NKTVFVITH 234 (320)
T ss_pred HcCCChhHhcC-----CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-C-CCEEEEEec
Confidence 99996 34443 3457999999999999999999999999999999999999999999998764 3 445666788
Q ss_pred CchhHHhhcCeEEEEcCCeEEEecChhhHHH---HHHhcCCCCCC
Q 000524 384 PAPETYDLFDDIILLSDGQIVYQGPRELVLE---FFESMGFKCPK 425 (1444)
Q Consensus 384 ~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~---~F~~~Gf~cp~ 425 (1444)
+.+++.+.+|+|++|++|++++.|+++++.+ .++..|..+|.
T Consensus 235 d~~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 235 TMEHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred CHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 8888899999999999999999999987742 34445555544
No 283
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=1.6e-32 Score=366.10 Aligned_cols=134 Identities=22% Similarity=0.247 Sum_probs=107.4
Q ss_pred CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHHHHHHHHHHHHHh---hCCC
Q 000524 943 HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLPGVSGLSTEQRKRLTIAVELV---ANPS 1018 (1444)
Q Consensus 943 ~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~lSgGqrkRl~ia~~L~---~~p~ 1018 (1444)
.+...||.|+|.++..-......+.++..+.+ ++++.+||.+. .+.. ...||||||||+.||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 44567999999876542211111223344455 58899999875 4554 3579999999999999998 5999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe-----cCcEEEEEcCC
Q 000524 1019 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK-----RGGQEIYVGPL 1084 (1444)
Q Consensus 1019 illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~-----~gg~~~y~G~~ 1084 (1444)
+++|||||+|||..+...+++.|++++++|.|||+++|++. .+ +.+|++++|. .||+++..|+.
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~-~i-~~aDrVi~L~p~gg~~~G~iv~~Gtp 901 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH-VV-KVADYVLELGPEGGNLGGYLLASCSP 901 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-HhCCEEEEEccCCCCCCCEEEEeCCH
Confidence 99999999999999999999999999888999999999985 34 8999999996 36899999976
No 284
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=6.5e-34 Score=324.46 Aligned_cols=204 Identities=23% Similarity=0.359 Sum_probs=170.0
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCC-----------CccceEEEEcCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF-----------VPERTAAYISQH 234 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-----------~~~~~~~yv~Q~ 234 (1444)
++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++... ..++.++||+|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 5899999999999999999999999999999999999887 99999999887532 123579999999
Q ss_pred CCCCCCCCHHHHHHHhhhh-cCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccc
Q 000524 235 DNHIGEMTVRETLAFSARC-QGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCAD 313 (1444)
Q Consensus 235 d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1444)
+.+++.+||+||+.++... ++. .. .+....++.+++.+||++..|
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~~~-~~---------------------------------~~~~~~~~~~l~~~gl~~~~~ 139 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVKGE-PK---------------------------------EEATARARELLAKVGLAGKET 139 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhcCC-CH---------------------------------HHHHHHHHHHHHHcCCcchhh
Confidence 9889999999999875321 110 00 001123566788999987666
Q ss_pred ccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcC
Q 000524 314 TMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFD 393 (1444)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD 393 (1444)
+.+ +.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+. +|+.++|+.+++.+++|
T Consensus 140 ~~~-----~~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~-tvi~~tH~~~~~~~~~d 212 (250)
T PRK11264 140 SYP-----RRLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-EKR-TMVIVTHEMSFARDVAD 212 (250)
T ss_pred CCh-----hhCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-cCC-EEEEEeCCHHHHHHhcC
Confidence 544 47999999999999999999999999999999999999999999998864 344 45557888888999999
Q ss_pred eEEEEcCCeEEEecChhhHH
Q 000524 394 DIILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1444)
+|++|++|++++.|+.+++.
T Consensus 213 ~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 213 RAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999987763
No 285
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-34 Score=356.62 Aligned_cols=220 Identities=21% Similarity=0.294 Sum_probs=184.8
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+. ++.+|+|||+++++||+++|+||||||||||+++|+|...+++.+|+|.++|.++.
T Consensus 6 l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 72 (506)
T PRK13549 6 LEMKNITKTFG-------------GVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQ 72 (506)
T ss_pred EEEeeeEEEeC-------------CeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 78889888763 24699999999999999999999999999999999998654335899999998764
Q ss_pred ccc----ccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 927 QET----FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 927 ~~~----~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
... .++.+||++|++.+++.+||+|++.+....+.....+.+...+.++++++.+++.+..+..+ ..||||
T Consensus 73 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 147 (506)
T PRK13549 73 ASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGLG 147 (506)
T ss_pred CCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCHH
Confidence 321 24568999999988899999999988654321111223334456889999999987777664 579999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
||||++||++|+.+|+||||||||+|||+.++..+++.|++++++|.|||+++|++. ++.+.||++++|++ |++++.|
T Consensus 148 qkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~ 225 (506)
T PRK13549 148 QQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGTR 225 (506)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeeec
Confidence 999999999999999999999999999999999999999999877999999999986 57788999999985 7999999
Q ss_pred CCCc
Q 000524 1083 PLGR 1086 (1444)
Q Consensus 1083 ~~~~ 1086 (1444)
+..+
T Consensus 226 ~~~~ 229 (506)
T PRK13549 226 PAAG 229 (506)
T ss_pred cccc
Confidence 8753
No 286
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=7.8e-34 Score=320.40 Aligned_cols=201 Identities=29% Similarity=0.405 Sum_probs=169.2
Q ss_pred CceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc--ccccceEEEEe-cCCCCCCC
Q 000524 870 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ--ETFARISGYCE-QNDIHSPF 946 (1444)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~--~~~~~~~gyv~-q~~~~~~~ 946 (1444)
+.+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQP--TSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 345799999999999999999999999999999999997653 48999999986432 23456789997 55667788
Q ss_pred CcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCC
Q 000524 947 VTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPT 1026 (1444)
Q Consensus 947 lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPT 1026 (1444)
+|++|++.+...++. ...++..+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||
T Consensus 110 ~tv~e~l~~~~~~~~---~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 110 LPVIDSFYLLAAIYD---LPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred CcHHHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 999999988654431 223334456788999999988877764 579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1027 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1027 sgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999999765 899999999986 57788999999985 7887654
No 287
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-33 Score=331.68 Aligned_cols=225 Identities=23% Similarity=0.252 Sum_probs=183.2
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
-++.+|+++.+....... ...+...+|+|||++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~~---~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLF---KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCcc---ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 478899988775321100 001135699999999999999999999999999999999998653 479999999876
Q ss_pred Ccc------cccceEEEEecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCC
Q 000524 926 KQE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGV 996 (1444)
Q Consensus 926 ~~~------~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~ 996 (1444)
... .+++.++|++|++ .+.|.+|+.+++........ .....+.++.+.++++.+||.+ ..++. +
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p 152 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINT--SLSAAERREKALAMMAKVGLRPEHYDRY-----P 152 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHcc--CCCHHHHHHHHHHHHHHCCCChHHhcCC-----C
Confidence 431 2456799999997 57889999999876544321 2334455667899999999964 44554 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecC
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1075 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~g 1075 (1444)
..||||||||++||+||+.+|++|++||||++||..++..|++.|+++.++ |.|||++||+.+ .+.+.+|++++|+.
T Consensus 153 ~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~- 230 (327)
T PRK11308 153 HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL- 230 (327)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 679999999999999999999999999999999999999999999999765 999999999986 46678999999985
Q ss_pred cEEEEEcCC
Q 000524 1076 GQEIYVGPL 1084 (1444)
Q Consensus 1076 g~~~y~G~~ 1084 (1444)
|++++.|+.
T Consensus 231 G~ive~g~~ 239 (327)
T PRK11308 231 GRCVEKGTK 239 (327)
T ss_pred CEEEEECCH
Confidence 899999985
No 288
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=7.1e-34 Score=326.17 Aligned_cols=219 Identities=26% Similarity=0.360 Sum_probs=177.7
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc------eEEEEEEE
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG------YITGNITI 920 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~------~~~G~i~i 920 (1444)
++++|+++.+. ++.+|+|+|+.|++||+++|+||||||||||+++|+|...+. ..+|+|.+
T Consensus 2 l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~ 68 (272)
T PRK13547 2 LTADHLHVARR-------------HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTL 68 (272)
T ss_pred eEEEEEEEEEC-------------CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEE
Confidence 56778877663 246999999999999999999999999999999999976532 12799999
Q ss_pred cCccCCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000524 921 SGYPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 996 (1444)
Q Consensus 921 ~g~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1444)
+|.+... ..+++.++|++|++..++.+||+|++.+....... .....+...+.++++++.++|.+..++. +
T Consensus 69 ~g~~~~~~~~~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~ 143 (272)
T PRK13547 69 NGEPLAAIDAPRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----V 143 (272)
T ss_pred CCEEcccCCHHHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----c
Confidence 9987643 23455689999998766679999999875321110 0111123345688999999998776654 3
Q ss_pred CcCCHHHHHHHHHHHHHh---------hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhc
Q 000524 997 SGLSTEQRKRLTIAVELV---------ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAF 1066 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~---------~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~f 1066 (1444)
..||||||||++||++|+ .+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|++. ++.+.+
T Consensus 144 ~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~ 222 (272)
T PRK13547 144 TTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHA 222 (272)
T ss_pred ccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhC
Confidence 579999999999999999 599999999999999999999999999999776 899999999986 577889
Q ss_pred ceEEEEecCcEEEEEcCCC
Q 000524 1067 DELFLMKRGGQEIYVGPLG 1085 (1444)
Q Consensus 1067 D~v~ll~~gg~~~y~G~~~ 1085 (1444)
|++++|++ |++++.|+..
T Consensus 223 d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 223 DRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred CEEEEEEC-CeEEEecCHH
Confidence 99999985 7999999863
No 289
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=8.4e-34 Score=320.12 Aligned_cols=202 Identities=25% Similarity=0.301 Sum_probs=166.5
Q ss_pred ccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCC--CccceEEEEc-CCCCCCC
Q 000524 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF--VPERTAAYIS-QHDNHIG 239 (1444)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~-Q~d~~~~ 239 (1444)
..+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++ |++.+++
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 3467999999999999999999999999999999999999987 99999999875432 1245789997 5567778
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000524 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1444)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1444)
.+||+||+.+.....+... .+....++.+++.+||++..|+.++
T Consensus 109 ~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~~-- 152 (236)
T cd03267 109 DLPVIDSFYLLAAIYDLPP----------------------------------ARFKKRLDELSELLDLEELLDTPVR-- 152 (236)
T ss_pred CCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhcCChh--
Confidence 9999999988654322100 0011234667888999988887664
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ .+|+.++|+.+++.+++|++++|.
T Consensus 153 ---~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiiivsH~~~~~~~~~d~i~~l~ 228 (236)
T cd03267 153 ---QLSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRERG-TTVLLTSHYMKDIEALARRVLVID 228 (236)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCC-CEEEEEecCHHHHHHhCCEEEEEe
Confidence 6999999999999999999999999999999999999999999999865334 455557788888899999999999
Q ss_pred CCeEEEec
Q 000524 400 DGQIVYQG 407 (1444)
Q Consensus 400 ~G~iv~~G 407 (1444)
+|++++.|
T Consensus 229 ~G~i~~~g 236 (236)
T cd03267 229 KGRLLYDG 236 (236)
T ss_pred CCEEEecC
Confidence 99998765
No 290
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=6.8e-34 Score=322.15 Aligned_cols=205 Identities=19% Similarity=0.339 Sum_probs=170.7
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC-----ccceEEEEcCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDNHIG 239 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~~~ 239 (1444)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 45999999999999999999999999999999999999987 999999999876421 2457999999998899
Q ss_pred CCCHHHHHHHhhh-hcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 240 EMTVRETLAFSAR-CQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 240 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
.+||+||+.++.. ..+.. . .+....++++++.+||++..+..+
T Consensus 91 ~~tv~~~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~~-- 134 (240)
T PRK09493 91 HLTALENVMFGPLRVRGAS----------K------------------------EEAEKQARELLAKVGLAERAHHYP-- 134 (240)
T ss_pred CCcHHHHHHhHHHHhcCCC----------H------------------------HHHHHHHHHHHHHcCChHHHhcCh--
Confidence 9999999987532 11100 0 001123567889999987666544
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
+.|||||||||+||+|++.+|++++|||||+|||..++..+.+.|++++. .+ ++|+.++|+.+++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l 209 (240)
T PRK09493 135 ---SELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-EG-MTMVIVTHEIGFAEKVASRLIFI 209 (240)
T ss_pred ---hhcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 47999999999999999999999999999999999999999999998764 34 45555778888899999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999988764
No 291
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=325.18 Aligned_cols=216 Identities=23% Similarity=0.282 Sum_probs=180.2
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|+++.+.. ..+.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~--~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKV--KSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEC
Confidence 4789999887741 113589999999999999999999999999999999998653 489999999876
Q ss_pred Cc---ccccceEEEEecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000524 926 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 926 ~~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1001 (1444)
.. ...++.++|++|++. +++..|+.+++.+..... ....+...+.++++++.+++.+..+.. ++.||+
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 145 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENH---AVPYDEMHRRVSEALKQVDMLERADYE-----PNALSG 145 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhc---CCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCH
Confidence 43 234567899999974 677789999998864322 123344455688999999998877765 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++. .+|++++|++ |++++
T Consensus 146 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~-~~d~i~~l~~-G~i~~ 222 (269)
T PRK13648 146 GQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAM-EADHVIVMNK-GTVYK 222 (269)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999998765 899999999986 455 4999999985 89999
Q ss_pred EcCCC
Q 000524 1081 VGPLG 1085 (1444)
Q Consensus 1081 ~G~~~ 1085 (1444)
.|+..
T Consensus 223 ~g~~~ 227 (269)
T PRK13648 223 EGTPT 227 (269)
T ss_pred ecCHH
Confidence 99863
No 292
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=8e-34 Score=336.51 Aligned_cols=203 Identities=21% Similarity=0.306 Sum_probs=175.7
Q ss_pred CceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCc----cCCc---cc---c-cceEEEEe
Q 000524 870 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGY----PKKQ---ET---F-ARISGYCE 938 (1444)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~----~~~~---~~---~-~~~~gyv~ 938 (1444)
+...+|+|+||+|++||+++|+|+||||||||+++|+|...+ ..|+|.++|. ++.. .. + ++.++|++
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p--~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPV--SRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 456799999999999999999999999999999999998653 4899999995 2211 11 1 24699999
Q ss_pred cCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCC
Q 000524 939 QNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPS 1018 (1444)
Q Consensus 939 q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~ 1018 (1444)
|+..++|.+||+||+.|....+ ..+.+++.+.++++++.+||.+..+..+ ..||||||||++|||+|+.+|+
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~---g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~ 184 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQ---GMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDAD 184 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999876543 2344556677899999999998877764 5799999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1019 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1019 illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
||+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 185 ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~ 249 (382)
T TIGR03415 185 ILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTP 249 (382)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 99999999999999999999999999765 899999999986 67899999999985 899999986
No 293
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-34 Score=327.97 Aligned_cols=218 Identities=20% Similarity=0.285 Sum_probs=179.7
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++.... ...+.+|+|||++|++||+++|+|+||||||||+++|+|... +.+|+|.++|.++.
T Consensus 5 l~~~~l~~~~~~~~~-------~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i~ 75 (280)
T PRK13633 5 IKCKNVSYKYESNEE-------STEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDTS 75 (280)
T ss_pred EEEeeeEEEcCCCCC-------CCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecc
Confidence 778999888742100 012469999999999999999999999999999999999865 34899999998764
Q ss_pred c----ccccceEEEEecCCCC-CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000524 927 Q----ETFARISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 927 ~----~~~~~~~gyv~q~~~~-~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1001 (1444)
. ...++.+||++|++.. ....||.|++.|..... .....+.++.++++++.+||.+..++.+ ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~ 147 (280)
T PRK13633 76 DEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL---GIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLSG 147 (280)
T ss_pred ccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc---CCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCH
Confidence 3 2245679999999742 23468999998875432 2234444567899999999998887764 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++. .+|++++|++ |++++
T Consensus 148 G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~~-G~i~~ 224 (280)
T PRK13633 148 GQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMDS-GKVVM 224 (280)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999764 999999999987 454 4999999986 79999
Q ss_pred EcCC
Q 000524 1081 VGPL 1084 (1444)
Q Consensus 1081 ~G~~ 1084 (1444)
.|+.
T Consensus 225 ~g~~ 228 (280)
T PRK13633 225 EGTP 228 (280)
T ss_pred ecCH
Confidence 9885
No 294
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.1e-32 Score=356.35 Aligned_cols=211 Identities=24% Similarity=0.367 Sum_probs=177.9
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++++|++|+++. ++.+|+|+|++|+|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 472 ~~I~~~~vsf~y~~------------~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p--~~G~I~idg~~ 537 (708)
T TIGR01193 472 GDIVINDVSYSYGY------------GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQA--RSGEILLNGFS 537 (708)
T ss_pred CcEEEEEEEEEcCC------------CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCC--CCcEEEECCEE
Confidence 46999999999851 23599999999999999999999999999999999998764 58999999988
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 994 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1444)
+.+ ..+++.+|||+|++.+++ .|++||+.++.. .+.+. +.++++++..++.+. .|+.+|..
T Consensus 538 i~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~l~~~----~~~~~----~~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 538 LKDIDRHTLRQFINYLPQEPYIFS-GSILENLLLGAK----ENVSQ----DEIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred HHHcCHHHHHHheEEEecCceehh-HHHHHHHhccCC----CCCCH----HHHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 654 456788999999998886 599999976421 12222 336777887777553 36677764
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++ +|+|+|+++|+++ ..+.+|++++|++
T Consensus 609 -G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~ 683 (708)
T TIGR01193 609 -GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH 683 (708)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC
Confidence 4689999999999999999999999999999999999999999999985 4899999999985 5688999999986
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 684 -G~i~~~G~~ 692 (708)
T TIGR01193 684 -GKIIEQGSH 692 (708)
T ss_pred -CEEEEECCH
Confidence 899999984
No 295
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-34 Score=317.32 Aligned_cols=197 Identities=31% Similarity=0.436 Sum_probs=165.9
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC--ccceEEEEcCCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--PERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 242 (1444)
.++|+|+|+.+++| +++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 88 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFT 88 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCC
Confidence 35999999999999 99999999999999999999999987 999999998875432 2467999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+||+.+..+..+... .+....++.+++.+||++..++.+ .
T Consensus 89 v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 129 (211)
T cd03264 89 VREFLDYIAWLKGIPS----------------------------------KEVKARVDEVLELVNLGDRAKKKI-----G 129 (211)
T ss_pred HHHHHHHHHHHhCCCH----------------------------------HHHHHHHHHHHHHCCCHHHHhCch-----h
Confidence 9999998654321100 001123567889999987777655 4
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++. + ++|+.++|+.+++.+++|++++|++|+
T Consensus 130 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~l~~g~ 206 (211)
T cd03264 130 SLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--D-RIVILSTHIVEDVESLCNQVAVLNKGK 206 (211)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--C-CEEEEEcCCHHHHHHhCCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999998763 3 556667888888889999999999999
Q ss_pred EEEec
Q 000524 403 IVYQG 407 (1444)
Q Consensus 403 iv~~G 407 (1444)
+++.|
T Consensus 207 i~~~g 211 (211)
T cd03264 207 LVFEG 211 (211)
T ss_pred EEecC
Confidence 98765
No 296
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=7.7e-34 Score=314.24 Aligned_cols=189 Identities=23% Similarity=0.373 Sum_probs=161.8
Q ss_pred eEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC---c----ccccceEEEEecCCCCC
Q 000524 872 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK---Q----ETFARISGYCEQNDIHS 944 (1444)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~---~----~~~~~~~gyv~q~~~~~ 944 (1444)
+.+|+|+|+.+++||+++|+||||||||||+++|+|... +.+|+|.++|.+.. . ...++.++|++|++.++
T Consensus 11 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 88 (206)
T TIGR03608 11 KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFALI 88 (206)
T ss_pred EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhhc
Confidence 469999999999999999999999999999999999865 34899999998742 1 12356799999999988
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeC
Q 000524 945 PFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDE 1024 (1444)
Q Consensus 945 ~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDE 1024 (1444)
+.+|++||+.+....+ ........+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||
T Consensus 89 ~~~t~~e~~~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDE 160 (206)
T TIGR03608 89 ENETVEENLDLGLKYK---KLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADE 160 (206)
T ss_pred cCCcHHHHHHHHHHhc---CCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 9999999998865432 1233344556889999999988777663 5799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEE
Q 000524 1025 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1072 (1444)
Q Consensus 1025 PTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll 1072 (1444)
||+|||+.+...+.+.|+++.++|.|||+++|++. +.+.+|++++|
T Consensus 161 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 161 PTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 99999999999999999998877999999999985 45789999875
No 297
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2e-34 Score=368.32 Aligned_cols=210 Identities=25% Similarity=0.394 Sum_probs=177.0
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++|+|+++.+. +++.+|+|+|++++||+++||+|+||||||||+++|+|.. + .+|+|.+||.+
T Consensus 348 ~~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~ 412 (588)
T PRK11174 348 VTIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIE 412 (588)
T ss_pred ceEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEe
Confidence 3699999986542 1246999999999999999999999999999999999976 4 48999999988
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-------cccccccCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-------LIQSLVGLP 994 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-------~~~~~vg~~ 994 (1444)
+.+ ..+++.++||+|++.++. -|++||+.++. ++.+. +.++++++..++.+ -.||.+|..
T Consensus 413 i~~~~~~~lr~~i~~v~Q~~~LF~-~TI~eNI~~g~-----~~~~~----eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 413 LRELDPESWRKHLSWVGQNPQLPH-GTLRDNVLLGN-----PDASD----EQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred cccCCHHHHHhheEEecCCCcCCC-cCHHHHhhcCC-----CCCCH----HHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 654 456788999999998886 59999998751 12232 34677788777765 346777765
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
| .+||||||||++|||||+++|+||+||||||+||+++++.|++.|+++. +++|+|+++|+++ ..+.+|+|++|++
T Consensus 483 G-~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~ 558 (588)
T PRK11174 483 A-AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD 558 (588)
T ss_pred C-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC
Confidence 4 5799999999999999999999999999999999999999999999885 5899999999985 5678999999985
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 559 -G~i~e~G~~ 567 (588)
T PRK11174 559 -GQIVQQGDY 567 (588)
T ss_pred -CeEeecCCH
Confidence 899998874
No 298
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-34 Score=328.00 Aligned_cols=217 Identities=24% Similarity=0.313 Sum_probs=180.5
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCce-EEEEEEEcCcc
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGY-ITGNITISGYP 924 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~-~~G~i~i~g~~ 924 (1444)
-++++|+++.++. ..+.+|+|||++|++||++||+||||||||||+++|+|...+.. ..|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4788999887631 12359999999999999999999999999999999999765321 13899999988
Q ss_pred CCcc---cccceEEEEecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000524 925 KKQE---TFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 925 ~~~~---~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1000 (1444)
.... ..++.+||++|++. .++..||.|++.|....+ ....++.++.++++++.++|.+..++. ++.||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~LS 145 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENR---AVPRPEMIKIVRDVLADVGMLDYIDSE-----PANLS 145 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhC---CCCHHHHHHHHHHHHHHCCChhHhcCC-----cccCC
Confidence 6532 24567899999974 566789999998764322 233445556789999999999877766 46899
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEE
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1079 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~ 1079 (1444)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++ ..||++++|++ |+++
T Consensus 146 ~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~~-G~i~ 222 (282)
T PRK13640 146 GGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLDD-GKLL 222 (282)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 34 57999999985 7999
Q ss_pred EEcCC
Q 000524 1080 YVGPL 1084 (1444)
Q Consensus 1080 y~G~~ 1084 (1444)
+.|+.
T Consensus 223 ~~g~~ 227 (282)
T PRK13640 223 AQGSP 227 (282)
T ss_pred EeCCH
Confidence 99985
No 299
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-33 Score=318.23 Aligned_cols=199 Identities=27% Similarity=0.397 Sum_probs=171.6
Q ss_pred EeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc-cccceEEEEecCCCCCCCCcHHHH
Q 000524 874 LLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE-TFARISGYCEQNDIHSPFVTVYES 952 (1444)
Q Consensus 874 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-~~~~~~gyv~q~~~~~~~lTv~e~ 952 (1444)
+|+|+|++|+|||+++|+|+||||||||+++|+|... +.+|+|.++|.+.... ..++.++|++|++.+++.+|+.|+
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999765 3589999999876542 234578999999999999999999
Q ss_pred HHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHH
Q 000524 953 LLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1032 (1444)
Q Consensus 953 l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~ 1032 (1444)
+.+..... ........+.+.++++.++|.+..++.+ ..||||||||++||++|+.+|++++|||||+|||+.
T Consensus 92 l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~ 163 (235)
T cd03299 92 IAYGLKKR---KVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVR 163 (235)
T ss_pred HHHHHHHc---CCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHH
Confidence 98764332 1223334456788999999988777764 579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1033 AAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1033 s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 164 ~~~~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 164 TKEKLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999998765 999999999985 57788999999986 799998875
No 300
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-34 Score=319.80 Aligned_cols=211 Identities=21% Similarity=0.293 Sum_probs=176.3
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++++|+++.++. + ..|||+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~-------------~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 64 (232)
T PRK10771 2 LKLTDITWLYHH-------------L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHT 64 (232)
T ss_pred eEEEEEEEEECC-------------c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecC
Confidence 567888887741 1 238999999999999999999999999999999865 34799999998764
Q ss_pred cc-cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000524 927 QE-TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 1005 (1444)
Q Consensus 927 ~~-~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1005 (1444)
.. ..++.++|++|++.+++.+|+.||+.+..... ... .+..++.++++++.++|.+..++.+ ..|||||||
T Consensus 65 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~--~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 136 (232)
T PRK10771 65 TTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPG--LKL-NAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQ 136 (232)
T ss_pred cCChhhccEEEEecccccccCCcHHHHHhcccccc--cCC-CHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHH
Confidence 32 12456899999999999999999998753211 111 1233556899999999998877764 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1006 Rl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 137 rv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 137 RVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999999999999998764 899999999986 57788999999986 799999885
No 301
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-34 Score=327.32 Aligned_cols=205 Identities=25% Similarity=0.353 Sum_probs=169.9
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCC-CCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 240 (1444)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 34899999999999999999999999999999999999997 9999999998865432 357999999973 6777
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||.|||.++.+..+... .+....++++++.+||++..++.++
T Consensus 97 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~~--- 139 (279)
T PRK13635 97 ATVQDDVAFGLENIGVPR----------------------------------EEMVERVDQALRQVGMEDFLNREPH--- 139 (279)
T ss_pred ccHHHHHhhhHhhCCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCcc---
Confidence 899999998654321100 0112246778999999877776554
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|++++... +++|+.++|..+++. .+|+|++|++
T Consensus 140 --~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~-~~tilivsH~~~~~~-~~d~i~~l~~ 215 (279)
T PRK13635 140 --RLSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQK-GITVLSITHDLDEAA-QADRVIVMNK 215 (279)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcC-CCEEEEEecCHHHHH-cCCEEEEEEC
Confidence 699999999999999999999999999999999999999999999986533 444555667777775 5999999999
Q ss_pred CeEEEecChhhHH
Q 000524 401 GQIVYQGPRELVL 413 (1444)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1444)
|++++.|+.+++.
T Consensus 216 G~i~~~g~~~~~~ 228 (279)
T PRK13635 216 GEILEEGTPEEIF 228 (279)
T ss_pred CEEEEECCHHHHh
Confidence 9999999988765
No 302
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=328.83 Aligned_cols=219 Identities=20% Similarity=0.312 Sum_probs=177.2
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|+++.++... .....+|+|+|+++++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 6 ~l~i~nl~~~~~~~~--------~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKKT--------PFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIIS--ETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCCC--------ccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEEc
Confidence 478999988774210 0013599999999999999999999999999999999998653 479999999875
Q ss_pred Cc--------ccccceEEEEecCCCC-CCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCC
Q 000524 926 KQ--------ETFARISGYCEQNDIH-SPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPG 995 (1444)
Q Consensus 926 ~~--------~~~~~~~gyv~q~~~~-~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~ 995 (1444)
.. ..+++.++|++|++.. ....|++||+.|..... ....+...+.++++++.++|. +..++.
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~---~~~~~~~~~~~~~ll~~~~L~~~~~~~~----- 147 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNL---GENKQEAYKKVPELLKLVQLPEDYVKRS----- 147 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCChhHhcCC-----
Confidence 31 2345678999999742 22369999998864322 123334445678899999994 555554
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 996 ~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
++.||||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||+++|+++ ++.+.||++++|++
T Consensus 148 ~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~ 226 (289)
T PRK13645 148 PFELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE 226 (289)
T ss_pred hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 3579999999999999999999999999999999999999999999998764 899999999986 57889999999985
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|++++.|+.
T Consensus 227 -G~i~~~g~~ 235 (289)
T PRK13645 227 -GKVISIGSP 235 (289)
T ss_pred -CEEEEeCCH
Confidence 799998875
No 303
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-34 Score=320.83 Aligned_cols=209 Identities=26% Similarity=0.348 Sum_probs=174.6
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 67 (241)
T PRK14250 3 EIEFKEVSYSSF-------------GKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDI 67 (241)
T ss_pred eEEEEeEEEEeC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEh
Confidence 367888887763 2359999999999999999999999999999999999765 3489999999875
Q ss_pred Cc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCH
Q 000524 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 926 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSg 1001 (1444)
.. ...++.++|++|++.+++ .|++|++.+....+ . . ....++++++.++|. +..++. ...|||
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~---~-~---~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 134 (241)
T PRK14250 68 KTIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLK---G-E---KNVDVEYYLSIVGLNKEYATRD-----VKNLSG 134 (241)
T ss_pred hhcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhc---C-c---HHHHHHHHHHHcCCCHHHhhCC-----cccCCH
Confidence 42 234567899999988776 69999997653322 1 1 123578899999996 455543 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||+++|++. ++.+.+|++++|++ |+++.
T Consensus 135 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~ 212 (241)
T PRK14250 135 GEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVE 212 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEE
Confidence 9999999999999999999999999999999999999999998764 899999999986 57788999999986 78988
Q ss_pred EcCC
Q 000524 1081 VGPL 1084 (1444)
Q Consensus 1081 ~G~~ 1084 (1444)
.|+.
T Consensus 213 ~~~~ 216 (241)
T PRK14250 213 YAKT 216 (241)
T ss_pred eCCH
Confidence 8875
No 304
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=321.56 Aligned_cols=219 Identities=26% Similarity=0.307 Sum_probs=175.7
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 922 (1444)
-+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 378899988773 2359999999999999999999999999999999999632 21 2479999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
.+... ..+++.++|++|+..+++ .||+||+.+....+. ....+..++.++++++.+++.+....... ..+.
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 147 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKG--IKDKQVLDEAVEKSLKGASIWDEVKDRLH-DSAL 147 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCchhHHHHHh-cCcc
Confidence 87632 134567999999988877 899999987654321 11223334567889999988532111111 1246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 148 ~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14239 148 GLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFLD-GD 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 699999999986 57889999999986 79
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
+++.|+.
T Consensus 225 i~~~g~~ 231 (252)
T PRK14239 225 LIEYNDT 231 (252)
T ss_pred EEEeCCH
Confidence 9999875
No 305
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-33 Score=330.93 Aligned_cols=222 Identities=19% Similarity=0.235 Sum_probs=181.0
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC---ceEEEEEEEc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITIS 921 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 921 (1444)
..+.++|+++.+.. +.+.+|+|+|++|++||++||+|+||||||||+++|+|.... .+.+|+|.+|
T Consensus 79 ~~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~id 147 (329)
T PRK14257 79 NVFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFL 147 (329)
T ss_pred ceEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 35899999988742 123599999999999999999999999999999999997532 2357999999
Q ss_pred CccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000524 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 996 (1444)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1444)
|.++.. ...++.++||+|++.+++ .|++||+.|..... ...+.+..++.++++++.++|.+..++.++.. .
T Consensus 148 G~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~--~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~-~ 223 (329)
T PRK14257 148 GTNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNN--GINDRKILEKIVEKSLKSAALWDEVKDDLDKA-G 223 (329)
T ss_pred CEEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhc--CCChHHHHHHHHHHHHHHcCCcchhhhhhhCC-c
Confidence 998752 234667999999998875 79999999864322 11122233445788899999865444444433 5
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
..||||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. .+.+.+|++++|++ |
T Consensus 224 ~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G 300 (329)
T PRK14257 224 NALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-G 300 (329)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 68999999999999999999999999999999999999999999999875 799999999986 46777999999985 8
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
+++..|+.
T Consensus 301 ~i~e~g~~ 308 (329)
T PRK14257 301 WIEEAGET 308 (329)
T ss_pred EEEEeCCH
Confidence 99999986
No 306
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=332.08 Aligned_cols=208 Identities=20% Similarity=0.240 Sum_probs=174.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc------cceEEEEcCCC--C
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHD--N 236 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1444)
..+|+|||+.|++||+++|+|+||||||||+++|+|.++|+ +|+|.++|+++..... ++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 56999999999999999999999999999999999999887 9999999998865432 35799999997 5
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcc-ccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV-CADTM 315 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1444)
+.+.+||.+++....+...... + .+...++.++++.+||+. ..++.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 151 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTSLS---------A------------------------AERREKALAMMAKVGLRPEHYDRY 151 (327)
T ss_pred cCCccCHHHHHHHHHHHccCCC---------H------------------------HHHHHHHHHHHHHCCCChHHhcCC
Confidence 8899999999987654321000 0 011234677899999963 45544
Q ss_pred ccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeE
Q 000524 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1444)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1444)
++.|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+.. +++++.++|+...+.+++|+|
T Consensus 152 -----p~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~-g~til~iTHdl~~~~~~adrv 225 (327)
T PRK11308 152 -----PHMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQEL-GLSYVFISHDLSVVEHIADEV 225 (327)
T ss_pred -----CccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHhCCEE
Confidence 45799999999999999999999999999999999999999999999986543 456666899999999999999
Q ss_pred EEEcCCeEEEecChhhHHH
Q 000524 396 ILLSDGQIVYQGPRELVLE 414 (1444)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1444)
++|++|++++.|+.+++.+
T Consensus 226 ~vm~~G~ive~g~~~~~~~ 244 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIFN 244 (327)
T ss_pred EEEECCEEEEECCHHHHhc
Confidence 9999999999999988753
No 307
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-33 Score=324.31 Aligned_cols=219 Identities=21% Similarity=0.249 Sum_probs=176.1
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC---ceEEEEEEEc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITIS 921 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 921 (1444)
..+.++|+++.++ .+.+|+|+|++|++||+++|+||||||||||+++|+|.... .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 3588999988773 24699999999999999999999999999999999997542 1358999999
Q ss_pred CccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000524 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 996 (1444)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1444)
|.++.. ...++.++|++|++.+++ .||+||+.+.+..+. ... ..++.++++++.+++....+... ...+
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~-~~~~ 152 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARING---YTG-DMDELVERSLRKAAVWDECKDKL-NESG 152 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcC---CcH-HHHHHHHHHHHHhCCcchhhhhh-CCCc
Confidence 987531 234567899999998887 499999988764431 111 22345778888888753211111 1124
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec--
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR-- 1074 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~-- 1074 (1444)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.||++++|++
T Consensus 153 ~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~~~ 230 (269)
T PRK14259 153 YSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFFNAEE 230 (269)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEeccc
Confidence 67999999999999999999999999999999999999999999999854 799999999986 68889999999985
Q ss_pred --------CcEEEEEcCC
Q 000524 1075 --------GGQEIYVGPL 1084 (1444)
Q Consensus 1075 --------gg~~~y~G~~ 1084 (1444)
+|++++.|+.
T Consensus 231 ~~~~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 231 VEGGSGGKVGYLVEFNET 248 (269)
T ss_pred cccccccccceEEEeCCH
Confidence 3678999886
No 308
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-34 Score=338.51 Aligned_cols=195 Identities=24% Similarity=0.362 Sum_probs=168.7
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCC-------CccceEEEEcCCCCCCCCCC
Q 000524 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF-------VPERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~~~~~lT 242 (1444)
|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++||+|++.+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999987 99999999887531 12467999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+||+.|+.+.. ....++.+++.+||++..+..+ +
T Consensus 93 v~enl~~~~~~~----------------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~ 127 (352)
T PRK11144 93 VRGNLRYGMAKS----------------------------------------MVAQFDKIVALLGIEPLLDRYP-----G 127 (352)
T ss_pred HHHHHHhhhhhh----------------------------------------hHHHHHHHHHHcCCchhhhCCc-----c
Confidence 999998853200 0113567889999987776554 4
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++++.++|+..++..++|+|++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~-g~tii~vTHd~~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREI-NIPILYVSHSLDEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CCeEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 799999999999999999999999999999999999999999999987543 4455668888899999999999999999
Q ss_pred EEEecChhhHH
Q 000524 403 IVYQGPRELVL 413 (1444)
Q Consensus 403 iv~~G~~~~~~ 413 (1444)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999998874
No 309
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=321.17 Aligned_cols=219 Identities=19% Similarity=0.250 Sum_probs=174.9
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC--c-eEEEEEEEcCc
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--G-YITGNITISGY 923 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g~ 923 (1444)
-+++|+++.++ .+.+|+|+||++++||+++|+|+||||||||+++|+|.... . +.+|+|.++|.
T Consensus 6 ~~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 72 (251)
T PRK14244 6 ASVKNLNLWYG-------------SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGI 72 (251)
T ss_pred EEeeeEEEEEC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCE
Confidence 35677776653 24699999999999999999999999999999999997541 1 35899999998
Q ss_pred cCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000524 924 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 998 (1444)
Q Consensus 924 ~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1444)
++.. ...++.++|++|++.+++. |++||+.+....+. .....+..++.++++++.++|.+...+.... .+..
T Consensus 73 ~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~~ni~~~~~~~~-~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~ 149 (251)
T PRK14244 73 DVYSVDTNVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGPKLHG-LAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFE 149 (251)
T ss_pred ehHhcccchHHHhhhEEEEecCcccccC-CHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-Chhh
Confidence 7532 1245678999999888875 99999987643331 1112233445678999999997532222111 2467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEE
Q 000524 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1078 (1444)
Q Consensus 999 lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~ 1078 (1444)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|++. ++.+.+|++++|++ |++
T Consensus 150 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i 226 (251)
T PRK14244 150 LSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRI 226 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999985 4899999999986 57788999999986 799
Q ss_pred EEEcCC
Q 000524 1079 IYVGPL 1084 (1444)
Q Consensus 1079 ~y~G~~ 1084 (1444)
++.|+.
T Consensus 227 ~~~~~~ 232 (251)
T PRK14244 227 VEYNTT 232 (251)
T ss_pred EEeCCH
Confidence 998875
No 310
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.5e-32 Score=353.69 Aligned_cols=210 Identities=26% Similarity=0.388 Sum_probs=177.4
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++++|++|+++. ..+.+|+|+|++|+|||.+||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP--WSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEe
Confidence 46999999999862 124599999999999999999999999999999999998764 48999999998
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 994 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1444)
+++ ..+++.+|||+|++.+++ .|++||+.++. + +.+ ++.++++++..++.+. .|+.+|..
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~----~-~~~----~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~ 612 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD----P-TIP----DADLVRACKDAAIHDVITSRPGGYDAELAEG 612 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC----C-CCC----HHHHHHHHHHhCCHHHHHhCcCcccceeccC
Confidence 654 356889999999998885 69999997531 1 222 2346778888887654 35667654
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|++ .++|+|+++|+++ ....+|++++|++
T Consensus 613 -G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~ 686 (710)
T TIGR03796 613 -GANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER 686 (710)
T ss_pred -CCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 468999999999999999999999999999999999999999999986 4899999999985 5677999999985
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 687 -G~i~~~G~~ 695 (710)
T TIGR03796 687 -GKVVQRGTH 695 (710)
T ss_pred -CEEEEecCH
Confidence 899999985
No 311
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=3.6e-34 Score=330.05 Aligned_cols=238 Identities=28% Similarity=0.440 Sum_probs=191.1
Q ss_pred HHhhcCCCCCccEEEEeceEEEEEEecCCCcCCChhHHHHHHHHHHHhhhccCCCccccceEeeceeeEEeCCeEEEEEc
Q 000524 106 RIDRVGIDLPKVEVRYEHLNVEGEAYLASKALPSFTKFYTTVFEDIFNYLGILPSRKKHLTILKDVSGIIKPGRMTLLLG 185 (1444)
Q Consensus 106 ~~~~~~~~~p~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G~~~~ilG 185 (1444)
+-+++.++-|+-.+..|++++-. | ..++++|+|+||.+.+|+-++|+|
T Consensus 322 ~~~~m~LP~P~g~L~Ve~l~~~P------------------------------P--g~~~pil~~isF~l~~G~~lgIIG 369 (580)
T COG4618 322 AAERMPLPAPQGALSVERLTAAP------------------------------P--GQKKPILKGISFALQAGEALGIIG 369 (580)
T ss_pred ccCCCCCCCCCceeeEeeeeecC------------------------------C--CCCCcceecceeEecCCceEEEEC
Confidence 33356666677778888887621 1 123679999999999999999999
Q ss_pred CCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCcc---ceEEEEcCCCCCCCCCCHHHHHHHhhhhcCCCchhhH
Q 000524 186 PPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPE---RTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYEL 262 (1444)
Q Consensus 186 p~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~ 262 (1444)
|||||||||.++|.|..+|. +|.|.+||.+++.+++. +.+||.||+-.+|+ -||.|||. |+.
T Consensus 370 PSgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIa---Rf~-------- 434 (580)
T COG4618 370 PSGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIA---RFG-------- 434 (580)
T ss_pred CCCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHH---hcc--------
Confidence 99999999999999999997 99999999999988764 78999999877776 59999995 221
Q ss_pred hHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccchhhhhHHHHHHHHhcCC
Q 000524 263 LTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPA 342 (1444)
Q Consensus 263 ~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p 342 (1444)
++.|.+...+|+...+ -| | -++.|++.+||.||+.+. +||||||||+++||||+++|
T Consensus 435 --------------~~~d~~kIieAA~lAg-vH----e---lIl~lP~GYdT~iG~~G~-~LSgGQRQRIaLARAlYG~P 491 (580)
T COG4618 435 --------------EEADPEKVIEAARLAG-VH----E---LILRLPQGYDTRIGEGGA-TLSGGQRQRIALARALYGDP 491 (580)
T ss_pred --------------ccCCHHHHHHHHHHcC-hH----H---HHHhCcCCccCccCCCCC-CCCchHHHHHHHHHHHcCCC
Confidence 1223333333322211 11 1 146799999999998654 89999999999999999999
Q ss_pred ccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEEEecChhhHHHHH
Q 000524 343 LALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGPRELVLEFF 416 (1444)
Q Consensus 343 ~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~~~~~~~~F 416 (1444)
.+++||||-|.||+.....+.+.|.+.. ..|+|+|+.. | .|.+...+|+|++|++|++-.+|+++|++...
T Consensus 492 ~lvVLDEPNsNLD~~GE~AL~~Ai~~~k-~rG~~vvvia-H-RPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 492 FLVVLDEPNSNLDSEGEAALAAAILAAK-ARGGTVVVIA-H-RPSALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred cEEEecCCCCCcchhHHHHHHHHHHHHH-HcCCEEEEEe-c-CHHHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 9999999999999999999999998865 3566666644 3 45688999999999999999999999998743
No 312
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=322.57 Aligned_cols=201 Identities=25% Similarity=0.360 Sum_probs=167.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCCHH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... .+.++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHH
Confidence 35999999999999999999999999999999999999987 99999999987542 34589999999889999999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccccc
Q 000524 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1444)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1444)
||+.+..+..+... .+....++.+++.+||++..++.+ ..|
T Consensus 89 e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 129 (255)
T PRK11248 89 DNVAFGLQLAGVEK----------------------------------MQRLEIAHQMLKKVGLEGAEKRYI-----WQL 129 (255)
T ss_pred HHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHhhCCh-----hhC
Confidence 99988643221100 001123567889999987666544 469
Q ss_pred chhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc--CCe
Q 000524 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1444)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~--~G~ 402 (1444)
||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|++++...+ ++|+.++|+..++.+++|+|++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g-~tviivsH~~~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETG-KQVLLITHDIEEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEeCCCcE
Confidence 99999999999999999999999999999999999999999998754334 445557788889999999999998 599
Q ss_pred EEEecChh
Q 000524 403 IVYQGPRE 410 (1444)
Q Consensus 403 iv~~G~~~ 410 (1444)
++..++.+
T Consensus 209 i~~~~~~~ 216 (255)
T PRK11248 209 VVERLPLN 216 (255)
T ss_pred EEEEecCC
Confidence 99988654
No 313
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-34 Score=321.63 Aligned_cols=206 Identities=21% Similarity=0.341 Sum_probs=170.7
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 46999999999999999999999999999999999999987 9999999998765432 3569999999988999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||+||+.+..+....... .+....++.+++.+||++..+..
T Consensus 93 ~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~----- 134 (241)
T PRK10895 93 LSVYDNLMAVLQIRDDLSA---------------------------------EQREDRANELMEEFHIEHLRDSM----- 134 (241)
T ss_pred CcHHHHHhhhhhcccccCH---------------------------------HHHHHHHHHHHHHcCCHHHhhcc-----
Confidence 9999999876432110000 00122456788999998665544
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
.+.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. .+. +|+.++|+..++.+++|++++|++
T Consensus 135 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g~-tiii~sH~~~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 135 GQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGL-GVLITDHNVRETLAVCERAYIVSQ 212 (241)
T ss_pred hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cCC-EEEEEEcCHHHHHHhcCEEEEEeC
Confidence 457999999999999999999999999999999999999999999998754 344 455567777889999999999999
Q ss_pred CeEEEecChhhHH
Q 000524 401 GQIVYQGPRELVL 413 (1444)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1444)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999988764
No 314
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=320.76 Aligned_cols=219 Identities=21% Similarity=0.243 Sum_probs=176.6
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 922 (1444)
-+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWYG-------------EKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEEC-------------CeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 367888887763 246999999999999999999999999999999999975421 2579999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
.++.. ...++.++|++|++.+++ .|++||+.|....... ...+...+.++++++.+++.+....... ....
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~ 146 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGI--KDKKELDKIVEWALKKAALWDEVKDDLK-KSAL 146 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHcCCchhhhhHhh-CCcc
Confidence 87632 123567899999998887 8999999886543211 1223344567889999988532111111 1246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||+|||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 147 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~~-G~ 223 (251)
T PRK14270 147 KLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFLM-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEEC-Ce
Confidence 8999999999999999999999999999999999999999999999876 689999999986 67888999999985 79
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14270 224 LIEFNKT 230 (251)
T ss_pred EEEeCCH
Confidence 9999886
No 315
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.5e-32 Score=354.64 Aligned_cols=122 Identities=24% Similarity=0.294 Sum_probs=102.2
Q ss_pred CcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccccCCCCCcCCHHHHHHHHHHHHHhhCC---CEEEE
Q 000524 947 VTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLVGLPGVSGLSTEQRKRLTIAVELVANP---SIIFM 1022 (1444)
Q Consensus 947 lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p---~illL 1022 (1444)
+||.|++.|...+.. .....+.++.+||.. ..+.. ...||||||||+.||++|+.+| ++++|
T Consensus 792 ltv~E~l~~f~~~~~---------i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llIL 857 (943)
T PRK00349 792 MTVEEALEFFEAIPK---------IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYIL 857 (943)
T ss_pred CcHHHHHHHHHhchh---------hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 788999888654321 112467899999975 34443 3579999999999999999999 99999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe-----cCcEEEEEcCC
Q 000524 1023 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK-----RGGQEIYVGPL 1084 (1444)
Q Consensus 1023 DEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~-----~gg~~~y~G~~ 1084 (1444)
||||+|||..+...+++.|+++.++|.|||+++|++. ..+.+|+++.|. +||++++.|+.
T Consensus 858 DEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 858 DEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 9999999999999999999999888999999999985 457899999995 57999999985
No 316
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=322.14 Aligned_cols=219 Identities=20% Similarity=0.263 Sum_probs=176.8
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 922 (1444)
-+.++|+++.+. .+.+|+|+|++|++||+++|+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 478999988763 2369999999999999999999999999999999999754 21 1479999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
.+... ...++.+||++|++.+++. ||+||+.+....+. ....++..+.++++++.+++.+....... ....
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~ 154 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHG--TKNKKKLQEIVEKSLKDVALWDEVKDRLH-TQAL 154 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhhhhhh-CCcc
Confidence 87632 2345678999999888875 99999987644321 11233344567889999998642111111 1246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 155 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 231 (259)
T PRK14274 155 SLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM-GE 231 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999865 799999999986 57889999999985 89
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
++..|+.
T Consensus 232 i~~~g~~ 238 (259)
T PRK14274 232 LVECNDT 238 (259)
T ss_pred EEEECCH
Confidence 9999875
No 317
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-34 Score=328.29 Aligned_cols=207 Identities=25% Similarity=0.332 Sum_probs=170.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCC--C---CccceEEEEcCCCC-CC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGE--F---VPERTAAYISQHDN-HI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~--~---~~~~~~~yv~Q~d~-~~ 238 (1444)
+.+|+|+|+.|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. . ..++.++|++|++. .+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 35999999999999999999999999999999999999987 9999999998741 1 12357999999863 34
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
...||+||+.++....+... .+....++++++.+||.+..++.+
T Consensus 96 ~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~-- 139 (283)
T PRK13636 96 FSASVYQDVSFGAVNLKLPE----------------------------------DEVRKRVDNALKRTGIEHLKDKPT-- 139 (283)
T ss_pred ccccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhhhhCCc--
Confidence 56899999988643221100 001124577889999987766554
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
+.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++..+ ++|+.++|..+++.+++|++++|
T Consensus 140 ---~~LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g-~tillvsH~~~~~~~~~dri~~l 215 (283)
T PRK13636 140 ---HCLSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELG-LTIIIATHDIDIVPLYCDNVFVM 215 (283)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCC-CEEEEEecCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999875334 45555788888888999999999
Q ss_pred cCCeEEEecChhhHHH
Q 000524 399 SDGQIVYQGPRELVLE 414 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~~ 414 (1444)
++|++++.|+.+++..
T Consensus 216 ~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 216 KEGRVILQGNPKEVFA 231 (283)
T ss_pred ECCEEEEeCCHHHHhc
Confidence 9999999999988753
No 318
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-34 Score=323.85 Aligned_cols=194 Identities=21% Similarity=0.284 Sum_probs=164.7
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCCHHH
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRE 245 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 245 (1444)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. .++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAE--AREDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHH--hhCceEEEecCccCCCCCcHHH
Confidence 4899999999999999999999999999999999999987 9999999977643 2467999999998889899999
Q ss_pred HHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccc
Q 000524 246 TLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGIS 325 (1444)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1444)
|+.++... . ....++.+++.+||.+..+..+ ..||
T Consensus 101 nl~~~~~~-----~-----------------------------------~~~~~~~~l~~~gl~~~~~~~~-----~~LS 135 (257)
T PRK11247 101 NVGLGLKG-----Q-----------------------------------WRDAALQALAAVGLADRANEWP-----AALS 135 (257)
T ss_pred HHHhcccc-----h-----------------------------------HHHHHHHHHHHcCChhHhcCCh-----hhCC
Confidence 99874210 0 0012456788899987666544 4799
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEEE
Q 000524 326 GGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1444)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~ 405 (1444)
|||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+..+.| |+.++|+..++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~t-viivsHd~~~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFT-VLLVTHDVSEAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999999999999999999999999876543444 5557788888889999999999999999
Q ss_pred ecChh
Q 000524 406 QGPRE 410 (1444)
Q Consensus 406 ~G~~~ 410 (1444)
+|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88754
No 319
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.4e-33 Score=308.45 Aligned_cols=190 Identities=47% Similarity=0.833 Sum_probs=162.3
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCC--CCceEEEEEEEcCc
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRK--TGGYITGNITISGY 923 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~--~~~~~~G~i~i~g~ 923 (1444)
.+.++|+++.++... ....+.+|+|+|+++++||+++|+||||||||||+++|+|.. . +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 478899988874210 001246999999999999999999999999999999999976 4 45899999998
Q ss_pred cCCcccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000524 924 PKKQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 1003 (1444)
Q Consensus 924 ~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1003 (1444)
+......++.++|++|++.+++.+|++|++.+...++ .|||||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~-------------------------------------~LS~G~ 116 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR-------------------------------------GLSGGE 116 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc-------------------------------------cCCHHH
Confidence 8754445677999999998888999999997642110 499999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1004 rkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
|||++||++|+.+|++++|||||+|||..++..+.+.|+++.++|+|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 117 ~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 117 RKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 99999999999999999999999999999999999999999777999999999997568889999999986 7887764
No 320
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.5e-33 Score=312.91 Aligned_cols=211 Identities=23% Similarity=0.219 Sum_probs=153.9
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCC---CCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKL---DSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l---~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~l 241 (1444)
+.++.|.|+.|-.|+.++++||||-||||||+-|+.+- +|+ -.+-||.|+- .-.+-
T Consensus 277 k~LFvnA~L~Iv~GRRYGLVGPNG~GKTTLLkHIa~RalaIPpn--------------------IDvLlCEQEv-vad~t 335 (807)
T KOG0066|consen 277 KLLFVNASLTIVYGRRYGLVGPNGMGKTTLLKHIAARALAIPPN--------------------IDVLLCEQEV-VADST 335 (807)
T ss_pred ceeeeccceEEEecceecccCCCCCchHHHHHHHHhhhccCCCC--------------------CceEeeeeee-eecCc
Confidence 45788999999999999999999999999999999873 332 2345777763 33344
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHH--H-----HHHHHHhhhhhhhHHHHHHHHHhCCcccccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDID--V-----YMKAIATEGQEANVITDYYLKVLGLEVCADT 314 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~--~-----~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt 314 (1444)
|..+++.-+- ..|.+++.+..+++.+.. .+|.. + +.+..+.....++.+...+|.-||.+.-..
T Consensus 336 ~Ai~tvl~aD-----~kRl~lLeee~~L~~q~e---~Gd~taaErl~~v~~ELraiGA~sAEarARRILAGLGFskEMQ- 406 (807)
T KOG0066|consen 336 SAIDTVLKAD-----KKRLALLEEEAKLMSQIE---EGDTTAAERLKEVADELRAIGADSAEARARRILAGLGFSKEMQ- 406 (807)
T ss_pred HHHHHHHHhh-----HHHHHHHHHHHHHHHHHH---cCchHHHHHHHHHHHHHHHhccccchhHHHHHHhhcCCChhHh-
Confidence 5666665432 234455555555554432 23321 1 222233344455667788999999986443
Q ss_pred cccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCe
Q 000524 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1444)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1444)
++.....|||.|-||++||||+..|-+|.|||||++||-....++-+.|+.+. +| +++++|+....-+.|.+
T Consensus 407 ---~rPt~kFSGGWRMRvSLARALflEPTLLMLDEPTNHLDLNAVIWLdNYLQgWk----KT-LLIVSHDQgFLD~VCtd 478 (807)
T KOG0066|consen 407 ---ERPTTKFSGGWRMRVSLARALFLEPTLLMLDEPTNHLDLNAVIWLDNYLQGWK----KT-LLIVSHDQGFLDSVCTD 478 (807)
T ss_pred ---cCCccccCCceeeehhHHHHHhcCceeeeecCCccccccceeeehhhHHhhhh----he-eEEEecccchHHHHHHH
Confidence 34455799999999999999999999999999999999999999999998763 34 44477888899999999
Q ss_pred EEEEcCCeEE-EecChhhHH
Q 000524 395 IILLSDGQIV-YQGPRELVL 413 (1444)
Q Consensus 395 vilL~~G~iv-~~G~~~~~~ 413 (1444)
||-|++-++- |.|++.-..
T Consensus 479 IIHLD~qkLhyYrGNY~~FK 498 (807)
T KOG0066|consen 479 IIHLDNQKLHYYRGNYTLFK 498 (807)
T ss_pred HhhhhhhhhhhhcchHHHHH
Confidence 9999988775 557665443
No 321
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=8.3e-34 Score=319.42 Aligned_cols=202 Identities=25% Similarity=0.339 Sum_probs=166.3
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 46999999999999999999999999999999999999987 9999999988765432 3569999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhC-CcccccccccCc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-LEVCADTMVGDE 319 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-L~~~~dt~vg~~ 319 (1444)
+||+||+.++.+..+.. . ....+.+++.++ +++..++.
T Consensus 90 ~tv~~~l~~~~~~~~~~----------~---------------------------~~~~~~~l~~~~~l~~~~~~~---- 128 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR----------S---------------------------RKIPDEIYELFPVLKEMLGRR---- 128 (230)
T ss_pred CcHHHHHHHHHHhcCcc----------h---------------------------HHHHHHHHHHHHhHHHHhhCC----
Confidence 99999998865422100 0 001234555565 44444443
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
++.||||||||++||++|+.+|++++|||||+|||+.++.++.+.|+++++.. +++|+.++|+.+++.+++|+|++|+
T Consensus 129 -~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~~sH~~~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 129 -GGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEG-GMAILLVEQYLDFARELADRYYVME 206 (230)
T ss_pred -hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcC-CcEEEEEeCCHHHHHHhCCEEEEEE
Confidence 45799999999999999999999999999999999999999999999876533 4455557788888999999999999
Q ss_pred CCeEEEecChhhH
Q 000524 400 DGQIVYQGPRELV 412 (1444)
Q Consensus 400 ~G~iv~~G~~~~~ 412 (1444)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998776
No 322
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=319.97 Aligned_cols=219 Identities=21% Similarity=0.295 Sum_probs=175.7
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 922 (1444)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|..... +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 69 (250)
T PRK14240 3 KISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDG 69 (250)
T ss_pred eEEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 367889888763 235999999999999999999999999999999999964321 2479999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
.++.. ...++.++|++|++.+++ .|++||+.+....+. ....+..++.++++++.+++.+....... ..+.
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 145 (250)
T PRK14240 70 QDIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHG--IKDKKKLDEIVEKSLKGAALWDEVKDRLK-KSAL 145 (250)
T ss_pred EEccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCchhhHHHHh-cCCC
Confidence 87642 124567899999988877 899999988654331 11223345568888999987532111111 1246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +++|||+++|++. ++.+.+|++++|++ |+
T Consensus 146 ~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~~~~~d~v~~l~~-G~ 222 (250)
T PRK14240 146 GLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK-KDYTIVIVTHNMQ-QASRISDKTAFFLN-GE 222 (250)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEEeCHH-HHHhhCCEEEEEEC-CE
Confidence 799999999999999999999999999999999999999999999985 4899999999985 57888999999986 79
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
++..|+.
T Consensus 223 i~~~~~~ 229 (250)
T PRK14240 223 IVEFGDT 229 (250)
T ss_pred EEEeCCH
Confidence 9998874
No 323
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=320.09 Aligned_cols=218 Identities=23% Similarity=0.327 Sum_probs=176.4
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc---eEEEEEEEcCc
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISGY 923 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g~ 923 (1444)
++++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYYG-------------EKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEeC-------------CceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 67888887763 235999999999999999999999999999999999975421 25899999998
Q ss_pred cCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000524 924 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 998 (1444)
Q Consensus 924 ~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1444)
++.. ...++.++|++|++.+++ .|++|++.+...... ....+..++.++++++.+++.+..+... ...+..
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~ 146 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHG--VKSKHKLDRIVEESLKKAALWDEVKSEL-NKPGTR 146 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcC--CCcHHHHHHHHHHHHHHcCCCchhHHHH-hCChhh
Confidence 7642 124567999999998887 899999987654321 1122334455788999999864321111 122468
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEE
Q 000524 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1078 (1444)
Q Consensus 999 lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~ 1078 (1444)
||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |++
T Consensus 147 LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i 223 (250)
T PRK14262 147 LSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GEL 223 (250)
T ss_pred cCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 799999999986 57888999999986 799
Q ss_pred EEEcCC
Q 000524 1079 IYVGPL 1084 (1444)
Q Consensus 1079 ~y~G~~ 1084 (1444)
+..|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14262 224 IEYGPT 229 (250)
T ss_pred EEecCH
Confidence 988875
No 324
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=331.01 Aligned_cols=222 Identities=17% Similarity=0.200 Sum_probs=178.4
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC--ceEEEEEEEcCcc
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--GYITGNITISGYP 924 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~~~~G~i~i~g~~ 924 (1444)
+.++|++..+... .+...+|+|||++|++||++||+|+||||||||+++|+|.... .+.+|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 6788888777432 1235699999999999999999999999999999999997642 2357999999987
Q ss_pred CCcc---c----ccceEEEEecCCC--CCCCCcHHHHHHHHHHhcCC-CC--CCHHHHHHHHHHHHHHcCCcccc---cc
Q 000524 925 KKQE---T----FARISGYCEQNDI--HSPFVTVYESLLYSAWLRLP-PE--VDSETRKMFIEEVMELVELKPLI---QS 989 (1444)
Q Consensus 925 ~~~~---~----~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~-~~--~~~~~~~~~v~~~l~~l~L~~~~---~~ 989 (1444)
+... . .++.++||+|++. +.|.+||.+++.+....... .. ....+.++.+.++++.+||.+.. +.
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~ 154 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS 154 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC
Confidence 6431 1 1346899999976 56889999999754221110 00 11123445688999999997532 33
Q ss_pred cccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcce
Q 000524 990 LVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDE 1068 (1444)
Q Consensus 990 ~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~ 1068 (1444)
. +..||||||||++||+||+.+|+||+|||||+|||+.++..+++.|+++.++ |.|||+++|+++ .+.+.+|+
T Consensus 155 ~-----p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dr 228 (330)
T PRK15093 155 F-----PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADK 228 (330)
T ss_pred C-----chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCE
Confidence 3 4689999999999999999999999999999999999999999999999875 899999999986 57788999
Q ss_pred EEEEecCcEEEEEcCC
Q 000524 1069 LFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1069 v~ll~~gg~~~y~G~~ 1084 (1444)
+++|.+ |++++.|+.
T Consensus 229 i~vm~~-G~ive~g~~ 243 (330)
T PRK15093 229 INVLYC-GQTVETAPS 243 (330)
T ss_pred EEEEEC-CEEEEECCH
Confidence 999985 899999985
No 325
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=321.40 Aligned_cols=220 Identities=21% Similarity=0.290 Sum_probs=178.0
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc-e--EEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG-Y--ITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~-~--~~G~i~i~g 922 (1444)
.+.++|+++.+. .+.+|+|+|+++++||+++|+|+||||||||+++|+|..... + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 478899988763 235999999999999999999999999999999999975432 1 479999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
.++.. ...++.++|++|++.+++ .|++||+.+....+. ..+....++.++++++.+++.+...... ...+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~-~~~~~ 149 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISA--KLPQADLDEIVESALKGAALWQEVKDKL-NKSAL 149 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhc--CCCHHHHHHHHHHHHHHcCCcchhhhHh-cCCcc
Confidence 87532 234567899999998887 899999987654432 1122333456788999998853211111 11246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec---
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR--- 1074 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~--- 1074 (1444)
.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+.
T Consensus 150 ~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~~~~~ 227 (259)
T PRK14260 150 GLSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFSTDES 227 (259)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEeccCC
Confidence 8999999999999999999999999999999999999999999999865 699999999996 68889999999983
Q ss_pred -CcEEEEEcCC
Q 000524 1075 -GGQEIYVGPL 1084 (1444)
Q Consensus 1075 -gg~~~y~G~~ 1084 (1444)
.|++++.|+.
T Consensus 228 ~~G~i~~~~~~ 238 (259)
T PRK14260 228 RIGQMVEFGVT 238 (259)
T ss_pred CCceEEEeCCH
Confidence 4899999986
No 326
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=324.86 Aligned_cols=205 Identities=25% Similarity=0.357 Sum_probs=167.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC---ccceEEEEcCCCC-CCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV---PERTAAYISQHDN-HIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999999987 999999999886432 2467999999974 6778
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||+||+.++....+... .+....++++++.+||++..++.+
T Consensus 99 ~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 140 (271)
T PRK13632 99 ATVEDDIAFGLENKKVPP----------------------------------KKMKDIIDDLAKKVGMEDYLDKEP---- 140 (271)
T ss_pred ccHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHHHhhCCc----
Confidence 999999988643211100 001124577889999987777655
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|++++.. ++++|+.++|..+++. .+|++++|++
T Consensus 141 -~~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~-~~~tiii~sH~~~~~~-~~d~v~~l~~ 217 (271)
T PRK13632 141 -QNLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKT-RKKTLISITHDMDEAI-LADKVIVFSE 217 (271)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHh-cCcEEEEEEechhHHh-hCCEEEEEEC
Confidence 479999999999999999999999999999999999999999999998653 3344444566666664 7999999999
Q ss_pred CeEEEecChhhHH
Q 000524 401 GQIVYQGPRELVL 413 (1444)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1444)
|++++.|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999987764
No 327
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=319.91 Aligned_cols=219 Identities=23% Similarity=0.260 Sum_probs=176.0
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 922 (1444)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 69 (249)
T PRK14253 3 KFNIENLDLFYG-------------ENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDG 69 (249)
T ss_pred eEEEeccEEEEC-------------CeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 367888887763 246999999999999999999999999999999999975431 3579999999
Q ss_pred ccCCc----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000524 923 YPKKQ----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 998 (1444)
Q Consensus 923 ~~~~~----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1444)
.++.. ...++.++|++|++.+++ .||.||+.+...... ....+...+.+.++++.+++.+....... .....
T Consensus 70 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~ 145 (249)
T PRK14253 70 EDIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQG--IKDKKVLDEVVERSLRGAALWDEVKDRLK-SHAFG 145 (249)
T ss_pred EEcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcC--CCchHHHHHHHHHHHHHcCCchhhhHHhh-cCccc
Confidence 87531 234567999999998887 899999987643321 11223334567888888888542211111 12467
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEE
Q 000524 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1078 (1444)
Q Consensus 999 lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~ 1078 (1444)
||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 146 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i 222 (249)
T PRK14253 146 LSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GEL 222 (249)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999875 689999999986 67888999999986 799
Q ss_pred EEEcCC
Q 000524 1079 IYVGPL 1084 (1444)
Q Consensus 1079 ~y~G~~ 1084 (1444)
+..|+.
T Consensus 223 ~~~g~~ 228 (249)
T PRK14253 223 VEHDDT 228 (249)
T ss_pred EEeCCH
Confidence 998875
No 328
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-34 Score=328.95 Aligned_cols=205 Identities=23% Similarity=0.337 Sum_probs=169.2
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC-------ccceEEEEcCCCC-
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHDN- 236 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~- 236 (1444)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 45999999999999999999999999999999999999997 999999999875321 1357999999863
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc-cccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTM 315 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1444)
.+..+||+||+.|+.+..+.. . .+...+++.+++.+||+ ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS-E---------------------------------DEAKEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHcCCChhHhhCC
Confidence 344689999998865322110 0 00112456789999996 455554
Q ss_pred ccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeE
Q 000524 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1444)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1444)
+ +.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.. . +++|+.++|+.+++.+++|+|
T Consensus 143 ~-----~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~-g~tvlivsH~~~~~~~~~d~v 215 (287)
T PRK13641 143 P-----FELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-A-GHTVILVTHNMDDVAEYADDV 215 (287)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-C-CCEEEEEeCCHHHHHHhCCEE
Confidence 4 46999999999999999999999999999999999999999999998753 3 555666888999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000524 396 ILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1444)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 329
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=2.4e-33 Score=315.19 Aligned_cols=197 Identities=27% Similarity=0.346 Sum_probs=162.2
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-------cceEEEEcCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYISQHDNHI 238 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~~ 238 (1444)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.++
T Consensus 24 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l~ 100 (228)
T PRK10584 24 SILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFMLI 100 (228)
T ss_pred EEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEcccccC
Confidence 5899999999999999999999999999999999999987 9999999998765432 24699999999899
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+.+||.||+.+.....+... .+....++.+++.+||.+..+..+
T Consensus 101 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 144 (228)
T PRK10584 101 PTLNALENVELPALLRGESS----------------------------------RQSRNGAKALLEQLGLGKRLDHLP-- 144 (228)
T ss_pred CCcCHHHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCh--
Confidence 99999999988643221100 001123567889999987666554
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|++++...+.|+|+ ++|+.+++ +.+|++++|
T Consensus 145 ---~~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~-~sH~~~~~-~~~d~i~~l 219 (228)
T PRK10584 145 ---AQLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIL-VTHDLQLA-ARCDRRLRL 219 (228)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEE-EecCHHHH-HhCCEEEEE
Confidence 4699999999999999999999999999999999999999999999986533445444 66666666 559999999
Q ss_pred cCCeEEEe
Q 000524 399 SDGQIVYQ 406 (1444)
Q Consensus 399 ~~G~iv~~ 406 (1444)
++|++++.
T Consensus 220 ~~g~i~~~ 227 (228)
T PRK10584 220 VNGQLQEE 227 (228)
T ss_pred ECCEEEec
Confidence 99999753
No 330
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=322.09 Aligned_cols=220 Identities=22% Similarity=0.262 Sum_probs=178.3
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC---ceEEEEEEEc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITIS 921 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 921 (1444)
..++++|+++.+. ++.+|+|+|+.|++||+++|+|+||||||||+++|+|.... .+.+|+|.++
T Consensus 24 ~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~ 90 (272)
T PRK14236 24 TALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLD 90 (272)
T ss_pred cEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEEC
Confidence 3588999998873 23599999999999999999999999999999999998542 1358999999
Q ss_pred CccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000524 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 996 (1444)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1444)
|.+... ..+++.++|++|++.+++. |++||+.+....+. ....+..++.++++++.+++.+......+ ...
T Consensus 91 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~ 166 (272)
T PRK14236 91 GQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQG--INNRRVLDEAVERSLRGAALWDEVKDRLH-ENA 166 (272)
T ss_pred CEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCChhHHHHhh-CCc
Confidence 987642 1345679999999888875 99999987654321 11222334568889999998642111111 124
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |
T Consensus 167 ~~LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G 243 (272)
T PRK14236 167 FGLSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMYM-G 243 (272)
T ss_pred ccCCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEEC-C
Confidence 67999999999999999999999999999999999999999999999975 799999999986 57788999999986 7
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
+++..|+.
T Consensus 244 ~i~~~g~~ 251 (272)
T PRK14236 244 KLVEYGDT 251 (272)
T ss_pred EEEecCCH
Confidence 99999875
No 331
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=6.6e-34 Score=284.34 Aligned_cols=197 Identities=25% Similarity=0.384 Sum_probs=170.0
Q ss_pred CceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc-------cccceEEEEecCCC
Q 000524 870 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE-------TFARISGYCEQNDI 942 (1444)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~-------~~~~~~gyv~q~~~ 942 (1444)
....||++|++.|++||.+||+|||||||||||-+|+|...+ .+|+|.+.|++.... ...+.+|+|+|...
T Consensus 21 ~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~--ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF~ 98 (228)
T COG4181 21 GELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDP--SSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSFH 98 (228)
T ss_pred cceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCC--CCceEEEcCcchhhcCHHHHHHhhccceeEEEEeee
Confidence 457899999999999999999999999999999999998764 489999999986431 13467999999999
Q ss_pred CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEE
Q 000524 943 HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFM 1022 (1444)
Q Consensus 943 ~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illL 1022 (1444)
+.|++|..||+.....++.....+ ......+.|+.+||.+..+.. +..|||||+|||+||||++..|+|||.
T Consensus 99 Lip~ltAlENV~lPleL~ge~~~~---~~~~A~~lL~~vGLg~Rl~Hy-----P~qLSGGEQQRVAiARAfa~~P~vLfA 170 (228)
T COG4181 99 LIPNLTALENVALPLELRGESSAD---SRAGAKALLEAVGLGKRLTHY-----PAQLSGGEQQRVALARAFAGRPDVLFA 170 (228)
T ss_pred ccccchhhhhccchhhhcCCcccc---HHHHHHHHHHHhCcccccccC-----ccccCchHHHHHHHHHHhcCCCCEEec
Confidence 999999999999888887532222 223467889999999877766 357999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEE
Q 000524 1023 DEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1079 (1444)
Q Consensus 1023 DEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~ 1079 (1444)
||||-+||..+...|.+.+-.+.++ |.|.|+++|+|+ +...|||.+-|.. |+++
T Consensus 171 DEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~ 225 (228)
T COG4181 171 DEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLV 225 (228)
T ss_pred cCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceec
Confidence 9999999999999999999888654 999999999985 6888999999986 6765
No 332
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=320.64 Aligned_cols=221 Identities=22% Similarity=0.270 Sum_probs=179.1
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 922 (1444)
.++++|+++.+. ...+|+|+|+++++||+++|+|+||||||||+++|+|...+. ...|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 478999988773 235999999999999999999999999999999999975432 2369999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
.++.. ...++.++|++|+..+++ .|+.||+.+....... ....+..+.+.++++.+++.+..+...+. .+.
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~ 149 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGW--RPKLEIDDIVESALKDADLWDEIKHKIHK-SAL 149 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCC--CcHHHHHHHHHHHHHHcCCcchhhhHhcC-Ccc
Confidence 87531 234567899999988887 8999999876433211 12223345688999999986532222221 246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcceEEEEecC-
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRG- 1075 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~t~Hqps~~i~~~fD~v~ll~~g- 1075 (1444)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ .|+|||+++|++. ++.+.||++++|++|
T Consensus 150 ~LSgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~ 228 (261)
T PRK14258 150 DLSGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNE 228 (261)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCC
Confidence 7999999999999999999999999999999999999999999999865 4899999999986 688899999999864
Q ss_pred ---cEEEEEcCC
Q 000524 1076 ---GQEIYVGPL 1084 (1444)
Q Consensus 1076 ---g~~~y~G~~ 1084 (1444)
|++++.|+.
T Consensus 229 ~~~G~i~~~~~~ 240 (261)
T PRK14258 229 NRIGQLVEFGLT 240 (261)
T ss_pred CcCceEEEeCCH
Confidence 899999986
No 333
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=8e-34 Score=316.03 Aligned_cols=195 Identities=26% Similarity=0.374 Sum_probs=163.1
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------PERTAAYISQHDNHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 35999999999999999999999999999999999999987 999999999876532 235799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+.+||+||+.+.....+.. . .+....++++++.+||++..++.+
T Consensus 91 ~~~t~~~~l~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP-P---------------------------------REIRKRVPAALELVGLSHKHRALP-- 134 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC-H---------------------------------HHHHHHHHHHHHHcCCHHHhhCCh--
Confidence 9999999999875432110 0 001123567888999987766554
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+ ++|+.++|+.+++.+++|++++|
T Consensus 135 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~-~tiiivtH~~~~~~~~~d~i~~l 209 (214)
T cd03292 135 ---AELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-AG-TTVVVATHAKELVDTTRHRVIAL 209 (214)
T ss_pred ---hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999998754 34 45555778888888999999999
Q ss_pred cCCeE
Q 000524 399 SDGQI 403 (1444)
Q Consensus 399 ~~G~i 403 (1444)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 334
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=7.7e-34 Score=360.96 Aligned_cols=208 Identities=28% Similarity=0.434 Sum_probs=169.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
+++|+|+|+.++|||.+||+||||||||||+++|.|.++|+ +|+|.+||+++++... ++.++||+|++.+|. .
T Consensus 342 ~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~-~ 417 (567)
T COG1132 342 KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS-G 417 (567)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-c
Confidence 56999999999999999999999999999999999999997 9999999999987754 578999999987777 7
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
||+|||.++..- .+.++..+++... ..++.+. .|+++.||.||+.+.
T Consensus 418 TI~~NI~~g~~~-------------------------at~eei~~a~k~a------~~~d~I~--~lp~g~dt~vge~G~ 464 (567)
T COG1132 418 TIRENIALGRPD-------------------------ATDEEIEEALKLA------NAHEFIA--NLPDGYDTIVGERGV 464 (567)
T ss_pred cHHHHHhcCCCC-------------------------CCHHHHHHHHHHh------ChHHHHH--hCcccccceecCCCc
Confidence 999999997421 0111111111111 0122222 357788999996544
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
.||||||||++||||++.+|++|+||||||+||+.+...|.+.++++. .++|+++ +.|..+.+.+ +|+|++|++|
T Consensus 465 -~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~--~~rT~ii-IaHRlsti~~-aD~IiVl~~G 539 (567)
T COG1132 465 -NLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL--KGRTTLI-IAHRLSTIKN-ADRIIVLDNG 539 (567)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh--cCCEEEE-EeccHhHHHh-CCEEEEEECC
Confidence 799999999999999999999999999999999999999999999765 3467777 6665555544 9999999999
Q ss_pred eEEEecChhhHHH
Q 000524 402 QIVYQGPRELVLE 414 (1444)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1444)
++++.|++++++.
T Consensus 540 ~i~e~G~h~eLl~ 552 (567)
T COG1132 540 RIVERGTHEELLA 552 (567)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999975
No 335
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3.7e-32 Score=353.34 Aligned_cols=212 Identities=26% Similarity=0.432 Sum_probs=179.5
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++|+|++|+|+. .++.+|+|+|++|+|||++||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 462 ~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 528 (694)
T TIGR03375 462 GEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQP--TEGSVLLDGVD 528 (694)
T ss_pred ceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 46999999999852 124599999999999999999999999999999999998764 48999999998
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 994 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1444)
+++ ..+++.++||+|++.+++ .|++||+.+.. + +.+ ++.++++++..++.+. .||.+|..
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~----~-~~~----~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~ 598 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGA----P-YAD----DEEILRAAELAGVTEFVRRHPDGLDMQIGER 598 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCC----C-CCC----HHHHHHHHHHcChHHHHHhCcccccceecCC
Confidence 654 356788999999998886 59999997641 1 222 2346778888877654 46667654
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.||+|++|++
T Consensus 599 -G~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~ 674 (694)
T TIGR03375 599 -GRSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN 674 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC
Confidence 46799999999999999999999999999999999999999999999885 4899999999985 5688999999985
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 675 -G~i~e~G~~ 683 (694)
T TIGR03375 675 -GRIVADGPK 683 (694)
T ss_pred -CEEEeeCCH
Confidence 899999974
No 336
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.1e-33 Score=322.76 Aligned_cols=223 Identities=20% Similarity=0.267 Sum_probs=179.4
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++++..+.. +...+.+.+|+|+|+.+++||+++|+|||||||||||++|+|...+ .+|+|.++|.++.
T Consensus 5 l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEP--TSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCCEEEECCEECC
Confidence 788999887742110 0000124699999999999999999999999999999999998653 4899999998764
Q ss_pred cc---cccceEEEEecCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCC
Q 000524 927 QE---TFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 927 ~~---~~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lS 1000 (1444)
.. ..++.++|++|++. +.+.+|+.|++.+....+. ........+.++++++.++|. +..+.. +..||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 151 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNT--DLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLA 151 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcC
Confidence 31 22356899999975 5678899999987654432 123334445688999999994 555554 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEE
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEI 1079 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~ 1079 (1444)
||||||++||++|+.+|+||+|||||+|||+.+...+.+.|++++++ |+|||+++|+++ ++...||++++|++ |+++
T Consensus 152 ~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~ 229 (267)
T PRK15112 152 PGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVV 229 (267)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999986 57778999999985 8999
Q ss_pred EEcCC
Q 000524 1080 YVGPL 1084 (1444)
Q Consensus 1080 y~G~~ 1084 (1444)
+.|+.
T Consensus 230 ~~~~~ 234 (267)
T PRK15112 230 ERGST 234 (267)
T ss_pred ecCCH
Confidence 88875
No 337
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1e-33 Score=318.16 Aligned_cols=202 Identities=26% Similarity=0.314 Sum_probs=165.8
Q ss_pred eeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCCHHHHH
Q 000524 168 LKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVRETL 247 (1444)
Q Consensus 168 L~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 247 (1444)
|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999987 9999999998765432 248999999999999999999
Q ss_pred HHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccchh
Q 000524 248 AFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGG 327 (1444)
Q Consensus 248 ~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGG 327 (1444)
.++.+...... .. .+....++.+++.+||++..++.+ +.||||
T Consensus 76 ~~~~~~~~~~~--------~~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPDL--------SK------------------------SERRAIVEEHIALVGLTEAADKRP-----GQLSGG 118 (230)
T ss_pred HHHHHhcccCC--------CH------------------------HHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHH
Confidence 88632100000 00 001123567889999987776655 469999
Q ss_pred hhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEEEec
Q 000524 328 ERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1444)
Q Consensus 328 qrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G 407 (1444)
|||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+ .+|+.++|+.+++.+.+|+|++|++|++++.|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHR-VTVLMVTHDVDEALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhcCEEEEEeCCcEeccc
Confidence 99999999999999999999999999999999999999998865434 45555778888899999999999999999988
Q ss_pred ChhhH
Q 000524 408 PRELV 412 (1444)
Q Consensus 408 ~~~~~ 412 (1444)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65543
No 338
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-33 Score=312.53 Aligned_cols=191 Identities=23% Similarity=0.381 Sum_probs=163.1
Q ss_pred ccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc-------ccccceEEEEecCCCCCCCCcH
Q 000524 877 GLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 949 (1444)
Q Consensus 877 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~lTv 949 (1444)
|||+++++ |+++|+||||||||||+++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+|+
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 92 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKP--DGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLNV 92 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCC--CCceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCCH
Confidence 99999999 99999999999999999999998653 48999999987531 1235678999999988889999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000524 950 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1444)
Q Consensus 950 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgL 1029 (1444)
+|++.+..... .....++.++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 ~~~l~~~~~~~-----~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~~L 162 (214)
T cd03297 93 RENLAFGLKRK-----RNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLDEPFSAL 162 (214)
T ss_pred HHHHHHHHhhC-----CHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99998764321 1233345688999999998766665 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1030 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1030 D~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
|+.++..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |+++..|
T Consensus 163 D~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 163 DRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 999999999999999775 899999999986 57788999999986 7887765
No 339
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=322.13 Aligned_cols=206 Identities=33% Similarity=0.500 Sum_probs=170.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 35999999999999999999999999999999999999887 9999999988764332 35689999998888889
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
||+||+.++....+. .. .+....++.+++.+||++..++.+
T Consensus 92 tv~e~l~~~~~~~~~-~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 132 (258)
T PRK13548 92 TVEEVVAMGRAPHGL-SR---------------------------------AEDDALVAAALAQVDLAHLAGRDY----- 132 (258)
T ss_pred CHHHHHHhhhcccCC-Cc---------------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----
Confidence 999999885421110 00 001123567888999987666655
Q ss_pred cccchhhhhHHHHHHHHh------cCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeE
Q 000524 322 RGISGGERKRVTTGEMMV------GPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~------~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1444)
..|||||||||+||+||+ .+|++++|||||+|||+.++..+.+.|+++++..+ .+|+.++|+..++.+++|+|
T Consensus 133 ~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i 211 (258)
T PRK13548 133 PQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERG-LAVIVVLHDLNLAARYADRI 211 (258)
T ss_pred ccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHHHHHhcCEE
Confidence 469999999999999999 59999999999999999999999999999863344 45555778888899999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000524 396 ILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1444)
++|++|++++.|+.+++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999987764
No 340
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.5e-33 Score=335.72 Aligned_cols=199 Identities=24% Similarity=0.391 Sum_probs=169.4
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC-------ccceEEEEcCCCCCCCCCC
Q 000524 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1444)
|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 899999999999999999999999999999999987 999999998875321 2467999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+||+.|+.+... . . +....++++++.+||++..+..+ +
T Consensus 92 v~enl~~~~~~~~--~----------~------------------------~~~~~~~~~l~~~gL~~~~~~~~-----~ 130 (354)
T TIGR02142 92 VRGNLRYGMKRAR--P----------S------------------------ERRISFERVIELLGIGHLLGRLP-----G 130 (354)
T ss_pred HHHHHHHHhhccC--h----------h------------------------HHHHHHHHHHHHcCChhHhcCCh-----h
Confidence 9999998653210 0 0 01123567899999988777554 4
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+ ++++.++|+.+++..++|+|++|++|+
T Consensus 131 ~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g-~tiiivtH~~~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 131 RLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFG-IPILYVSHSLQEVLRLADRVVVLEDGR 209 (354)
T ss_pred hCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHHhCCEEEEEeCCE
Confidence 6999999999999999999999999999999999999999999999875434 455557888889999999999999999
Q ss_pred EEEecChhhHH
Q 000524 403 IVYQGPRELVL 413 (1444)
Q Consensus 403 iv~~G~~~~~~ 413 (1444)
+++.|+.+++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999988774
No 341
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=2.1e-33 Score=334.39 Aligned_cols=194 Identities=24% Similarity=0.384 Sum_probs=169.1
Q ss_pred ccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc-------ccccceEEEEecCCCCCCCCcH
Q 000524 877 GLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 949 (1444)
Q Consensus 877 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~lTv 949 (1444)
|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRP--DEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 99999999999999999999999999999998653 48999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000524 950 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1444)
Q Consensus 950 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgL 1029 (1444)
+||+.|+.... .....++.++++++.++|.+..++.+ ..||||||||++|||||+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~-----~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~L 162 (354)
T TIGR02142 93 RGNLRYGMKRA-----RPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAAL 162 (354)
T ss_pred HHHHHHHhhcc-----ChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCC
Confidence 99998865321 12234456899999999998877763 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1030 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1030 D~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|+.++..+.+.|++++++ |+|||+++|++. ++...+|++++|++ |+++..|+.
T Consensus 163 D~~~~~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 163 DDPRKYEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 999999999999999875 899999999986 68888999999986 799999875
No 342
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.1e-33 Score=315.03 Aligned_cols=194 Identities=30% Similarity=0.410 Sum_probs=162.0
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------PERTAAYISQHDNHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1444)
+.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 35999999999999999999999999999999999999887 999999999876542 235799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+.+||+||+.++....+... ......++++++.+||++..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKKE----------------------------------REIQRRVGAALRQVGLEHKADAFP-- 135 (214)
T ss_pred cCCcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCh--
Confidence 99999999998754321100 001123567888999987666554
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ ++|+.++|..+++.+++|++++|
T Consensus 136 ---~~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~tH~~~~~~~~~d~i~~l 210 (214)
T TIGR02673 136 ---EQLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RG-TTVIVATHDLSLVDRVAHRVIIL 210 (214)
T ss_pred ---hhCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCEEEEe
Confidence 46999999999999999999999999999999999999999999998754 34 45555778888999999999999
Q ss_pred cCCe
Q 000524 399 SDGQ 402 (1444)
Q Consensus 399 ~~G~ 402 (1444)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 343
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=333.86 Aligned_cols=190 Identities=24% Similarity=0.390 Sum_probs=167.2
Q ss_pred ccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc-------ccccceEEEEecCCCCCCCCcH
Q 000524 877 GLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-------ETFARISGYCEQNDIHSPFVTV 949 (1444)
Q Consensus 877 ~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-------~~~~~~~gyv~q~~~~~~~lTv 949 (1444)
|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.+... ...++.++|++|+..++|.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p--~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRP--QKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 89999999999999999999999999999998653 48999999987532 1235679999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000524 950 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1444)
Q Consensus 950 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgL 1029 (1444)
+||+.|... ...++.++++++.++|.+..+..+ ..||||||||++|||+|+.+|++|+|||||+||
T Consensus 94 ~enl~~~~~---------~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~L 159 (352)
T PRK11144 94 RGNLRYGMA---------KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASL 159 (352)
T ss_pred HHHHHhhhh---------hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccC
Confidence 999987532 112345889999999988777764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1030 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1030 D~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|+.++..+++.|+++.++ |+|||+++|++. ++...+|++++|++ |+++..|+.
T Consensus 160 D~~~~~~l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 213 (352)
T PRK11144 160 DLPRKRELLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPL 213 (352)
T ss_pred CHHHHHHHHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCH
Confidence 999999999999999765 899999999986 68899999999986 899999986
No 344
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2e-33 Score=322.74 Aligned_cols=207 Identities=24% Similarity=0.321 Sum_probs=170.3
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc------cceEEEEcCCC--
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHD-- 235 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d-- 235 (1444)
.+.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 356999999999999999999999999999999999999987 9999999998765422 35699999986
Q ss_pred CCCCCCCHHHHHHHhhhhc-CCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc-cccc
Q 000524 236 NHIGEMTVRETLAFSARCQ-GVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCAD 313 (1444)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~d 313 (1444)
.+++.+||+||+.+..... ... . .+....++.+++.+||+ ...+
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~~~~---------------------~-------------~~~~~~~~~~l~~~gl~~~~~~ 145 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLTSLD---------------------E-------------SEQKARIAELLDMVGLRSEDAD 145 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhcCCC---------------------H-------------HHHHHHHHHHHHHcCCChhhhh
Confidence 4667899999998754311 000 0 00112356788999996 5555
Q ss_pred ccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcC
Q 000524 314 TMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFD 393 (1444)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD 393 (1444)
.. ++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|+...+.+++|
T Consensus 146 ~~-----~~~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tiiivsH~~~~~~~~~d 219 (265)
T TIGR02769 146 KL-----PRQLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAF-GTAYLFITHDLRLVQSFCQ 219 (265)
T ss_pred CC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHHHHhc
Confidence 44 45799999999999999999999999999999999999999999999886533 4456667888888999999
Q ss_pred eEEEEcCCeEEEecChhhHH
Q 000524 394 DIILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1444)
++++|++|++++.|+.+++.
T Consensus 220 ~i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 220 RVAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEEeCCEEEEECCHHHHc
Confidence 99999999999999988764
No 345
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=319.62 Aligned_cols=203 Identities=26% Similarity=0.393 Sum_probs=166.1
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1444)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 35999999999999999999999999999999999999987 9999999998765432 3569999999989999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHh-CCcccccccccCc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL-GLEVCADTMVGDE 319 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l-gL~~~~dt~vg~~ 319 (1444)
+||+||+.++..... . + + ....++.+++.+ +|.+..++.
T Consensus 95 ~tv~~~l~~~~~~~~---~-~---~-----------------------------~~~~~~~~l~~~~~l~~~~~~~---- 134 (237)
T PRK11614 95 MTVEENLAMGGFFAE---R-D---Q-----------------------------FQERIKWVYELFPRLHERRIQR---- 134 (237)
T ss_pred CcHHHHHHHhhhccC---h-h---H-----------------------------HHHHHHHHHHHHHHHHHHHhCc----
Confidence 999999987542110 0 0 0 001123445555 355444443
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+.| |+.++|+.+++.+.+|++++|+
T Consensus 135 -~~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~t-iii~sH~~~~~~~~~d~i~~l~ 211 (237)
T PRK11614 135 -AGTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QGMT-IFLVEQNANQALKLADRGYVLE 211 (237)
T ss_pred -hhhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-CCCE-EEEEeCcHHHHHhhCCEEEEEe
Confidence 347999999999999999999999999999999999999999999998764 3445 5557788888999999999999
Q ss_pred CCeEEEecChhhHH
Q 000524 400 DGQIVYQGPRELVL 413 (1444)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1444)
+|++++.|+.+++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999988764
No 346
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.4e-33 Score=317.22 Aligned_cols=207 Identities=23% Similarity=0.291 Sum_probs=167.0
Q ss_pred EeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC----CCCeecEEEECCccCCCCCc-cceEEEEcCCCC--CCC
Q 000524 167 ILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDS----SLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDN--HIG 239 (1444)
Q Consensus 167 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~----~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 239 (1444)
+|+|+|+.+++|++++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57899999999999999999999999999999999987 6 9999999998765433 257999999974 556
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000524 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1444)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1444)
.+|+.|++.+.....+... .+....++.+++.+||++.. ...+.
T Consensus 78 ~~t~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~--~~~~~ 121 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKLS----------------------------------KQARALILEALEAVGLPDPE--EVLKK 121 (230)
T ss_pred ccCHHHHHHHHHHHcCccH----------------------------------HHHHHHHHHHHHHcCCCchH--HHHhC
Confidence 7899999987543211000 00112356789999997320 11123
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
.+..|||||||||+||++++.+|++++|||||+|||..+...+.+.|+++++.. +++|+.++|..+++..++|+|++|+
T Consensus 122 ~~~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiii~sH~~~~~~~~~d~i~~l~ 200 (230)
T TIGR02770 122 YPFQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLF-GTGILLITHDLGVVARIADEVAVMD 200 (230)
T ss_pred ChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEE
Confidence 445799999999999999999999999999999999999999999999886533 4455557788889999999999999
Q ss_pred CCeEEEecChhhHH
Q 000524 400 DGQIVYQGPRELVL 413 (1444)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1444)
+|+++..|+.+++.
T Consensus 201 ~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 201 DGRIVERGTVKEIF 214 (230)
T ss_pred CCEEEEeCCHHHHH
Confidence 99999999988764
No 347
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-33 Score=319.10 Aligned_cols=206 Identities=21% Similarity=0.296 Sum_probs=165.0
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CeecEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHDMGEF-----VPERTAAYISQHDNHI 238 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1444)
.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+. ..+|+|.++|+++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 48999999999999999999999999999999999998621 1389999999886421 1246799999998777
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc----ccccc
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE----VCADT 314 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1444)
+ +||+||+.++....+.... .+....++..++.+|+. +..++
T Consensus 101 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 L-MSIYDNISYGPKIHGTKDK---------------------------------KKLDEIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred c-CcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHhCCchhhHHHHhC
Confidence 4 8999999986533211000 00112345567777763 33444
Q ss_pred cccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCe
Q 000524 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1444)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1444)
. ++.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. .+ ++|+.++|+.+++.+++|+
T Consensus 147 ~-----~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~sH~~~~~~~~~d~ 218 (254)
T PRK14273 147 N-----ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK--ES-YTIIIVTHNMQQAGRISDR 218 (254)
T ss_pred C-----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhCCE
Confidence 3 45799999999999999999999999999999999999999999999984 24 4555578888889999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 000524 395 IILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1444)
|++|++|+++.+|+.+++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 348
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.1e-33 Score=319.43 Aligned_cols=206 Identities=24% Similarity=0.390 Sum_probs=168.7
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCeecEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNHI 238 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1444)
.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|+++... ..++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 5899999999999999999999999999999999999763 22389999999987642 1246799999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc----ccccc
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE----VCADT 314 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~dt 314 (1444)
+ +||+||+.+..+..+.... .+....++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKDK---------------------------------KELDEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCcchhhHhhC
Confidence 8 9999999986543210000 00112356778899997 44444
Q ss_pred cccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCe
Q 000524 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1444)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1444)
. ++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++++ + .+|+.++|+..++.+++|+
T Consensus 141 ~-----~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~ 212 (247)
T TIGR00972 141 S-----ALGLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--K-YTIVIVTHNMQQAARISDR 212 (247)
T ss_pred C-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--c-CeEEEEecCHHHHHHhCCE
Confidence 3 457999999999999999999999999999999999999999999998764 3 4556678888889999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 000524 395 IILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1444)
|++|++|+++++|+.+++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988763
No 349
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=6.6e-34 Score=369.12 Aligned_cols=205 Identities=26% Similarity=0.371 Sum_probs=165.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
+++|+|+|++++|||.++|+||||||||||+|+|+|.++|+ +|+|.+||+++.+..+ ++.++||+|++.+|+ .
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS-G 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-c
Confidence 45899999999999999999999999999999999999998 9999999999987764 578999999987765 5
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
|++|||.++.. . .. +... +++...+ .++.+ -.|++..||.+|+.+
T Consensus 542 TI~eNi~~~~~-~---~~-e~i~---------------------~al~~a~------l~~~i--~~lp~G~dt~ige~G- 586 (686)
T TIGR03797 542 SIFENIAGGAP-L---TL-DEAW---------------------EAARMAG------LAEDI--RAMPMGMHTVISEGG- 586 (686)
T ss_pred cHHHHHhcCCC-C---CH-HHHH---------------------HHHHHcC------cHHHH--HhccccccccccCCC-
Confidence 99999998632 0 00 1111 1111000 11112 235677899999765
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
.+||||||||++|||||+++|++++||||||+||+.+..+|.+.|+++ ++|+|+ ++|.. ++.+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~Ii-ItHr~-~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIV-IAHRL-STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEE-EecCh-HHHHcCCEEEEEECC
Confidence 579999999999999999999999999999999999999999999874 356555 55544 556779999999999
Q ss_pred eEEEecChhhHHH
Q 000524 402 QIVYQGPRELVLE 414 (1444)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1444)
+++++|+++++++
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999998864
No 350
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-33 Score=329.76 Aligned_cols=217 Identities=18% Similarity=0.199 Sum_probs=171.4
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CeecEEEECCccCCCCCc-------cceEEEEcCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL-KVSGRVTYNGHDMGEFVP-------ERTAAYISQHDN 236 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~-~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 236 (1444)
..+|+|||+.|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|+++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 569999999999999999999999999999999999986421 238999999998865432 246999999975
Q ss_pred --CCCCCCHHHHHHHhhhhcCC-CchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccc
Q 000524 237 --HIGEMTVRETLAFSARCQGV-GSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCAD 313 (1444)
Q Consensus 237 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~d 313 (1444)
+.+.+||.+++.+....... +..+ .. ..+.+..+.++|+.+||++..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~----------------~~-------------~~~~~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW----------------QR-------------FGWRKRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc----------------cc-------------HHHHHHHHHHHHHHCCCCChHH
Confidence 57889999999764321100 0000 00 0001234577899999975321
Q ss_pred ccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcC
Q 000524 314 TMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFD 393 (1444)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD 393 (1444)
+-+..+..|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++.+.. +++|+.++|+...+.+++|
T Consensus 151 --~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~-g~tii~itHdl~~v~~~~d 227 (330)
T PRK15093 151 --AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNN-NTTILLISHDLQMLSQWAD 227 (330)
T ss_pred --HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhc-CCEEEEEECCHHHHHHhCC
Confidence 1134456799999999999999999999999999999999999999999999986533 4566668999999999999
Q ss_pred eEEEEcCCeEEEecChhhHH
Q 000524 394 DIILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1444)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999988774
No 351
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.1e-33 Score=318.67 Aligned_cols=211 Identities=22% Similarity=0.328 Sum_probs=171.3
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1444)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 35999999999999999999999999999999999999987 9999999988765432 2469999999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||+||+.++..... ..+...... . ..+....++++++.+||++..++.+
T Consensus 92 ~tv~~nl~~~~~~~~--~~~~~~~~~-------------~-----------~~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (242)
T TIGR03411 92 LTVFENLELALPRDK--SVFASLFFR-------------L-----------SAEEKDRIEEVLETIGLADEADRLA---- 141 (242)
T ss_pred CCHHHHHHHhhhccc--ccccccccc-------------c-----------HHHHHHHHHHHHHHcCCchhhcCCh----
Confidence 999999998643110 000000000 0 0011234677899999987766554
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
+.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ +. +|+.++|..+++.++||+|++|++
T Consensus 142 -~~LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~~-tii~~sH~~~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 142 -GLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--KH-SVVVVEHDMEFVRSIADKVTVLHQ 217 (242)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--CC-EEEEEECCHHHHHHhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998753 34 555577888899999999999999
Q ss_pred CeEEEecChhhH
Q 000524 401 GQIVYQGPRELV 412 (1444)
Q Consensus 401 G~iv~~G~~~~~ 412 (1444)
|+++++|+.+++
T Consensus 218 g~~~~~~~~~~~ 229 (242)
T TIGR03411 218 GSVLAEGSLDQV 229 (242)
T ss_pred CeEEeeCCHHHH
Confidence 999999998765
No 352
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-33 Score=317.55 Aligned_cols=216 Identities=24% Similarity=0.283 Sum_probs=175.6
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCce---EEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGY---ITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~---~~G~i~i~g 922 (1444)
-+.++|+++.++ ++.+|+|+|+.|++||+++|+|+||||||||+++|+|...+.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYYG-------------DKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEEC-------------CEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 367788887763 2469999999999999999999999999999999999764322 379999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 993 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1444)
.++.. ..+++.++|++|++.+++.+|+.||+.+...... ....+...+.++++++.+++.. ..++.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 145 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAG--IRDRDHLMEVAERSLRGAALWDEVKDRLKTP--- 145 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCcchhhhhhhcCC---
Confidence 87642 1345678999999999999999999987643321 1122333455677777777643 23333
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe
Q 000524 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1073 (1444)
Q Consensus 994 ~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~ 1073 (1444)
+..||||||||++||++|+.+|++|+|||||+|||..++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|+
T Consensus 146 --~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~ 221 (252)
T PRK14272 146 --ATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFL 221 (252)
T ss_pred --cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999864 799999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000524 1074 RGGQEIYVGPL 1084 (1444)
Q Consensus 1074 ~gg~~~y~G~~ 1084 (1444)
+ |++++.|+.
T Consensus 222 ~-G~i~~~~~~ 231 (252)
T PRK14272 222 V-GDLVEHGPT 231 (252)
T ss_pred C-CEEEEeCCH
Confidence 6 799999875
No 353
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.1e-34 Score=363.49 Aligned_cols=211 Identities=28% Similarity=0.437 Sum_probs=178.5
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++|+|++|.++. ++.+|+|+|+.++|||++||+||||||||||++.|.|..++ .+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCEe
Confidence 46999999999862 34699999999999999999999999999999999997663 58999999988
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-------ccccccccCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-------PLIQSLVGLP 994 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-------~~~~~~vg~~ 994 (1444)
+++ ..+++.++||+|+..++. -||+||+.++. + +.++ +.++++++..++. +..||.+|.
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~----~-~at~----eei~~a~k~a~~~d~I~~lp~g~dt~vge- 461 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGR----P-DATD----EEIEEALKLANAHEFIANLPDGYDTIVGE- 461 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCC----C-CCCH----HHHHHHHHHhChHHHHHhCcccccceecC-
Confidence 664 456788999999999987 89999998762 1 1222 2355566555443 356888884
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
+...||||||||++||||++++|+||+||||||+||+.++..|++.++++. +++|+++++|+++ ....+|+|++|++
T Consensus 462 ~G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~ 538 (567)
T COG1132 462 RGVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN 538 (567)
T ss_pred CCccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC
Confidence 456899999999999999999999999999999999999999999999886 5789999999986 4455999999996
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++..|..
T Consensus 539 -G~i~e~G~h 547 (567)
T COG1132 539 -GRIVERGTH 547 (567)
T ss_pred -CEEEEecCH
Confidence 789999985
No 354
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.2e-33 Score=320.29 Aligned_cols=206 Identities=22% Similarity=0.328 Sum_probs=170.9
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC----------------ccceE
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV----------------PERTA 228 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~----------------~~~~~ 228 (1444)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 35999999999999999999999999999999999999987 999999998875321 14579
Q ss_pred EEEcCCCCCCCCCCHHHHHHHhhhh-cCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhC
Q 000524 229 AYISQHDNHIGEMTVRETLAFSARC-QGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG 307 (1444)
Q Consensus 229 ~yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg 307 (1444)
+|++|++.+++.+||.||+.++... .+.. . .+....++++++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMA-R---------------------------------AEAEKRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCC-H---------------------------------HHHHHHHHHHHHHcC
Confidence 9999999899999999999875321 1000 0 001123566789999
Q ss_pred CcccccccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchh
Q 000524 308 LEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPE 387 (1444)
Q Consensus 308 L~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~ 387 (1444)
|++..+.. ++.||||||||++||++|+.+|++++|||||+|||+.+...+.+.|+++++.. +++++.++|..++
T Consensus 136 l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~-~~tiiivsH~~~~ 209 (252)
T TIGR03005 136 LADKADHM-----PAQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEH-DLTMLLVTHEMGF 209 (252)
T ss_pred ChhHhhcC-----hhhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHH
Confidence 98766644 35799999999999999999999999999999999999999999999886533 4555567788888
Q ss_pred HHhhcCeEEEEcCCeEEEecChhhHH
Q 000524 388 TYDLFDDIILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 388 ~~~~fD~vilL~~G~iv~~G~~~~~~ 413 (1444)
+.+++|++++|++|++++.|+.+++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999987763
No 355
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-33 Score=322.92 Aligned_cols=216 Identities=23% Similarity=0.289 Sum_probs=179.9
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
-+.++|+++.++.. ....+|+|+|+++++||+++|+|+||||||||+++|+|... +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~----------~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEKE----------SDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCCC----------CcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 37889998887411 12359999999999999999999999999999999999875 3589999999876
Q ss_pred Cc---ccccceEEEEecCCC-CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000524 926 KQ---ETFARISGYCEQNDI-HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 926 ~~---~~~~~~~gyv~q~~~-~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1001 (1444)
.. ...++.+||++|++. .++..||.||+.+..... ....+...+.++++++.++|.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 143 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQ---GIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSG 143 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHc---CCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCH
Confidence 43 234567999999974 566789999998765432 123334445688999999998877765 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|++.. + ..+|++++|++ |+++.
T Consensus 144 G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~ 220 (277)
T PRK13642 144 GQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIK 220 (277)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999875 9999999999863 4 46999999986 78999
Q ss_pred EcCC
Q 000524 1081 VGPL 1084 (1444)
Q Consensus 1081 ~G~~ 1084 (1444)
.|+.
T Consensus 221 ~g~~ 224 (277)
T PRK13642 221 EAAP 224 (277)
T ss_pred eCCH
Confidence 8875
No 356
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-33 Score=320.89 Aligned_cols=221 Identities=21% Similarity=0.278 Sum_probs=172.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 240 (1444)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... +..++|++|++.++++
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 45999999999999999999999999999999999999987 9999999998765432 2358899999999999
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||+||+.++....... +...... + .+..+ ....+....++.+++.+||++..+..+
T Consensus 95 ~tv~enl~~~~~~~~~~---~~~~~~~------~-~~~~~---------~~~~~~~~~~~~~l~~~gl~~~~~~~~---- 151 (255)
T PRK11300 95 MTVIENLLVAQHQQLKT---GLFSGLL------K-TPAFR---------RAESEALDRAATWLERVGLLEHANRQA---- 151 (255)
T ss_pred CcHHHHHHHhhhccccc---hhhhhhc------c-ccccc---------cchhHHHHHHHHHHHhCChhhhhhCCh----
Confidence 99999999864311000 0000000 0 00000 000011234567889999987666554
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+.. +++|+.++|+.+++.+++|++++|++
T Consensus 152 -~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~-~~tii~~sH~~~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 152 -GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEH-NVTVLLIEHDMKLVMGISDRIYVVNQ 229 (255)
T ss_pred -hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhc-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4699999999999999999999999999999999999999999999876532 45555577888899999999999999
Q ss_pred CeEEEecChhhHH
Q 000524 401 GQIVYQGPRELVL 413 (1444)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1444)
|++++.|+.+++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999987763
No 357
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2e-33 Score=316.10 Aligned_cols=201 Identities=25% Similarity=0.340 Sum_probs=166.9
Q ss_pred EeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc--eEEEEEEEcCccCCcccc-cceEEEEecCCC--CCCCCc
Q 000524 874 LLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG--YITGNITISGYPKKQETF-ARISGYCEQNDI--HSPFVT 948 (1444)
Q Consensus 874 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~--~~~G~i~i~g~~~~~~~~-~~~~gyv~q~~~--~~~~lT 948 (1444)
+|+|+|+++++||+++|+||||||||||+++|+|...+. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 478999999999999999999999999999999986531 158999999988654322 357899999984 557789
Q ss_pred HHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc---ccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000524 949 VYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK---PLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1025 (1444)
Q Consensus 949 v~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~---~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEP 1025 (1444)
+.|++.+...... . ..+..++.++++++.+++. +..+.. +..||||||||++||++|+.+|+||+||||
T Consensus 81 ~~~~~~~~~~~~~--~-~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEP 152 (230)
T TIGR02770 81 MGNHAIETLRSLG--K-LSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEP 152 (230)
T ss_pred HHHHHHHHHHHcC--c-cHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 9999977543321 1 1233345689999999997 344444 457999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1026 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1026 TsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|+|||..+...+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 153 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 153 TTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred ccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999764 899999999986 67788999999986 899988875
No 358
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=4.5e-33 Score=317.87 Aligned_cols=214 Identities=21% Similarity=0.296 Sum_probs=175.1
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc--eEEEEEEEcC
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG--YITGNITISG 922 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~--~~~G~i~i~g 922 (1444)
..++++|+++.++ +.+|+|+|+.+++||+++|+|+||||||||+++|+|...+. +.+|+|.++|
T Consensus 3 ~~l~~~~l~~~~~--------------~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g 68 (254)
T PRK10418 3 QQIELRNIALQAA--------------QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDG 68 (254)
T ss_pred cEEEEeCeEEEec--------------cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECC
Confidence 3578899987762 24899999999999999999999999999999999986531 1579999999
Q ss_pred ccCCcccc-cceEEEEecCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc---cccccccCCCC
Q 000524 923 YPKKQETF-ARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP---LIQSLVGLPGV 996 (1444)
Q Consensus 923 ~~~~~~~~-~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~---~~~~~vg~~~~ 996 (1444)
.++..... ++.++|++|++. +.+..|+.+++.+.+.... ... .++.++++++.++|.+ ..++. .
T Consensus 69 ~~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~l~~~~l~~~~~~~~~~-----~ 138 (254)
T PRK10418 69 KPVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALG---KPA--DDATLTAALEAVGLENAARVLKLY-----P 138 (254)
T ss_pred eeccccccccceEEEEecCCccccCccccHHHHHHHHHHHcC---CCh--HHHHHHHHHHHcCCCChhhhhhcC-----C
Confidence 87653222 356899999974 4466899998866433221 111 2245889999999976 23443 4
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecC
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1075 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~g 1075 (1444)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++
T Consensus 139 ~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~- 216 (254)
T PRK10418 139 FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH- 216 (254)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 679999999999999999999999999999999999999999999998764 899999999986 57788999999985
Q ss_pred cEEEEEcCC
Q 000524 1076 GQEIYVGPL 1084 (1444)
Q Consensus 1076 g~~~y~G~~ 1084 (1444)
|++++.|+.
T Consensus 217 G~i~~~~~~ 225 (254)
T PRK10418 217 GRIVEQGDV 225 (254)
T ss_pred CEEEEecCH
Confidence 799998875
No 359
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=3.7e-32 Score=308.07 Aligned_cols=173 Identities=24% Similarity=0.305 Sum_probs=135.7
Q ss_pred eeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEEecCCCCCCCCcHHHHHH
Q 000524 875 LNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTVYESLL 954 (1444)
Q Consensus 875 L~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv~e~l~ 954 (1444)
|.==.+.|..||+++++||||-||||+.++|+|..++. +|+ .. .-.++|=||--.-....||++-|.
T Consensus 357 L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPd--eg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~ 423 (591)
T COG1245 357 LEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPD--EGS----EE-------DLKVSYKPQYISPDYDGTVEDLLR 423 (591)
T ss_pred EEecCCeeecceEEEEECCCCcchHHHHHHHhccccCC--CCC----Cc-------cceEeecceeecCCCCCcHHHHHH
Confidence 44456788999999999999999999999999976543 454 11 123577777655556789999775
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHH
Q 000524 955 YSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1034 (1444)
Q Consensus 955 f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~ 1034 (1444)
-...-+.. ..-+..++++-++|++..+..+ .+|||||.|||+||.+|.+++++.+||||++.||++.+
T Consensus 424 ~~~~~~~~-------~s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR 491 (591)
T COG1245 424 SAIRSAFG-------SSYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQR 491 (591)
T ss_pred Hhhhhhcc-------cchhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHH
Confidence 43222111 1123467888999999988874 57999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEe
Q 000524 1035 AIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMK 1073 (1444)
Q Consensus 1035 ~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~ 1073 (1444)
..+-++||+...+ +.|.+++-|+... +--..||+++..
T Consensus 492 ~~vakvIRR~~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 492 IIVAKVIRRFIENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HHHHHHHHHHHhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 9999999998754 7899999999652 334578888875
No 360
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-33 Score=324.33 Aligned_cols=203 Identities=27% Similarity=0.391 Sum_probs=168.3
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc----cceEEEEcCCCC-CCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDN-HIGE 240 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~-~~~~ 240 (1444)
.+|+|+|++|++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 16 PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 4899999999999999999999999999999999999987 9999999998865322 357999999975 4677
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
.||+||+.|+.+..+.. . .+....++.+++.+||++..++.+
T Consensus 93 ~tv~enl~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~gl~~~~~~~~---- 134 (274)
T PRK13644 93 RTVEEDLAFGPENLCLP-P---------------------------------IEIRKRVDRALAEIGLEKYRHRSP---- 134 (274)
T ss_pred chHHHHHHhhHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCHHHhcCCc----
Confidence 89999998865322110 0 001123567889999988777655
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.. .+ ++|+.++|+..++ ..+|+|++|++
T Consensus 135 -~~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g-~til~~tH~~~~~-~~~d~v~~l~~ 210 (274)
T PRK13644 135 -KTLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-KG-KTIVYITHNLEEL-HDADRIIVMDR 210 (274)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CC-CEEEEEecCHHHH-hhCCEEEEEEC
Confidence 46999999999999999999999999999999999999999999998764 34 4555567777777 56999999999
Q ss_pred CeEEEecChhhHH
Q 000524 401 GQIVYQGPRELVL 413 (1444)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1444)
|++++.|+.+++.
T Consensus 211 G~i~~~g~~~~~~ 223 (274)
T PRK13644 211 GKIVLEGEPENVL 223 (274)
T ss_pred CEEEEECCHHHHh
Confidence 9999999988764
No 361
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-33 Score=317.87 Aligned_cols=219 Identities=25% Similarity=0.266 Sum_probs=176.3
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 922 (1444)
-+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..... ..+|+|.++|
T Consensus 6 ~i~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWYG-------------EKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEEC-------------CeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 378899988763 246999999999999999999999999999999999964321 1379999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
.++.. ...++.++|++|++.+++. ||+||+.|....+.. ......++.+.++++.+++.+....... ....
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 148 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGE--KNKKTLDTIVEKSLKGAALWDEVKDRLH-DSAL 148 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCC--CCHHHHHHHHHHHHHHhcCchhhHHHhh-cChh
Confidence 87642 2335678999999988874 999999987554321 1223334567888999888542111111 1246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |+
T Consensus 149 ~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G~ 225 (253)
T PRK14261 149 SLSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-GK 225 (253)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999875 689999999986 57788999999986 79
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
++..|+.
T Consensus 226 i~~~g~~ 232 (253)
T PRK14261 226 LIEFDKT 232 (253)
T ss_pred EEEcCCH
Confidence 9998885
No 362
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-33 Score=287.22 Aligned_cols=206 Identities=27% Similarity=0.385 Sum_probs=177.4
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCCHH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1444)
..+|+|+|+.|.+||.+.++||||||||||||+++|..+|+ .|+|++||.+++- |...-|.|+|++.++|=+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~g--PgaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEG--PGAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccC--CCccceeEeccCccchhhHHH
Confidence 55899999999999999999999999999999999999998 9999999998864 344568999999999999999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccccc
Q 000524 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1444)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1444)
||++|+.+++|.++. . ...++...+...||++..+.. +-.|
T Consensus 93 dNvafgL~l~Gi~k~-------~---------------------------R~~~a~q~l~~VgL~~~~~~~-----i~qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKA-------Q---------------------------RREIAHQMLALVGLEGAEHKY-----IWQL 133 (259)
T ss_pred HHHHHHHHhcCCCHH-------H---------------------------HHHHHHHHHHHhCcccccccc-----eEee
Confidence 999999999886432 1 123456788999999876644 4579
Q ss_pred chhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc--CCe
Q 000524 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS--DGQ 402 (1444)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~--~G~ 402 (1444)
||||||||.|||||..+|+.|+||||+.+||.-|+.++...|-++.+..++ -+..++|..+|..-+++++++|+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk-~~lliTH~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGK-QVLLITHDIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCC-eEEEEeccHHHHHhhhheeEEecCCCce
Confidence 999999999999999999999999999999999999999988887765554 45558899999999999999998 589
Q ss_pred EEEecChhhHHHH
Q 000524 403 IVYQGPRELVLEF 415 (1444)
Q Consensus 403 iv~~G~~~~~~~~ 415 (1444)
|+..=+.+-...|
T Consensus 213 vv~~~~~df~rR~ 225 (259)
T COG4525 213 VVERLPLDFARRY 225 (259)
T ss_pred eeEecCCCHHHHh
Confidence 9988777644444
No 363
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-33 Score=323.68 Aligned_cols=205 Identities=25% Similarity=0.353 Sum_probs=170.7
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCC-CCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN-HIGEM 241 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 241 (1444)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++||+|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4899999999999999999999999999999999999987 9999999998764322 356899999963 34468
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
||.||+.++....+... .+....++.+++.+||.+..++.+
T Consensus 95 tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 135 (277)
T PRK13652 95 TVEQDIAFGPINLGLDE----------------------------------ETVAHRVSSALHMLGLEELRDRVP----- 135 (277)
T ss_pred cHHHHHHhHHHHcCCCH----------------------------------HHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 99999987653221100 001124567899999987777655
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
+.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.... +++|+.++|..+++.+.+|+|++|++|
T Consensus 136 ~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~-g~tvli~tH~~~~~~~~~drv~~l~~G 214 (277)
T PRK13652 136 HHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETY-GMTVIFSTHQLDLVPEMADYIYVMDKG 214 (277)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 4699999999999999999999999999999999999999999999986533 455566778888999999999999999
Q ss_pred eEEEecChhhHH
Q 000524 402 QIVYQGPRELVL 413 (1444)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1444)
++++.|+.+++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998874
No 364
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=3.9e-33 Score=311.67 Aligned_cols=211 Identities=23% Similarity=0.345 Sum_probs=175.3
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+... .+.+.+|+|+||++++|+++||+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~~~---------~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~ 70 (220)
T TIGR02982 2 ISIRNLNHYYGHG---------SLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELY 70 (220)
T ss_pred EEEEEEEEEccCC---------CcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhH
Confidence 5678888776310 012569999999999999999999999999999999999765 35899999998764
Q ss_pred cc------cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCC
Q 000524 927 QE------TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLS 1000 (1444)
Q Consensus 927 ~~------~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lS 1000 (1444)
.. .+++.++|++|++.+++.+|+.||+.+...... ....++..+.++++++.++|.+..++. ++.||
T Consensus 71 ~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~lS 143 (220)
T TIGR02982 71 GASEKELVQLRRNIGYIFQAHNLLGFLTARQNVQMALELQP--NLSYQEARERARAMLEAVGLGDHLDYY-----PHNLS 143 (220)
T ss_pred hcCHhHHHHHHhheEEEcCChhhcCCCCHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCChhhhhcC-----hhhCC
Confidence 21 245679999999988888999999988654321 123344455689999999998877766 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcceEEEEecCcEE
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1078 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~ 1078 (1444)
+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||+++|+++ +.+.+|++++|++ |++
T Consensus 144 ~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 144 GGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999999999999999999999999999999876 4899999999985 5689999999986 553
No 365
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-33 Score=324.37 Aligned_cols=205 Identities=25% Similarity=0.344 Sum_probs=169.0
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC----ccceEEEEcCCCC-CCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV----PERTAAYISQHDN-HIG 239 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 239 (1444)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 45999999999999999999999999999999999999987 999999999876422 2467999999974 344
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000524 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1444)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1444)
..||.||+.|+....+... .+....++++++.+||++..++.+
T Consensus 100 ~~~v~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gL~~~~~~~~--- 142 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIPP----------------------------------EEIRERVDESLKKVGMYEYRRHAP--- 142 (280)
T ss_pred cccHHHHHHhhHhhcCCCH----------------------------------HHHHHHHHHHHHHCCCHhHhhCCc---
Confidence 5799999998754321100 001224577899999988777665
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.| |+.++|...++.. +|++++|+
T Consensus 143 --~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~t-illvtH~~~~~~~-~d~v~~l~ 218 (280)
T PRK13633 143 --HLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGIT-IILITHYMEEAVE-ADRIIVMD 218 (280)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecChHHHhc-CCEEEEEE
Confidence 4699999999999999999999999999999999999999999999986533444 5556777777765 99999999
Q ss_pred CCeEEEecChhhHH
Q 000524 400 DGQIVYQGPRELVL 413 (1444)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1444)
+|+++++|+.+++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999998875
No 366
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-33 Score=316.90 Aligned_cols=219 Identities=20% Similarity=0.242 Sum_probs=175.6
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc---eEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~g 922 (1444)
.+.++|+++.+. ++.+|+|+|++|++|++++|+||||||||||+++|+|...+. +..|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g 70 (251)
T PRK14249 4 KIKIRGVNFFYH-------------KHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDN 70 (251)
T ss_pred eEEEEEEEEEEC-------------CeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECC
Confidence 367888887763 235999999999999999999999999999999999976532 2369999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
.++.. ...++.++|++|++.+++. |++||+.+....+.. ...+..++.++++++.+++.+....... ....
T Consensus 71 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 146 (251)
T PRK14249 71 ENIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGT--TAQSRLDEVVEKSLRQAALWDEVKDNLH-KSGL 146 (251)
T ss_pred EEccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCC--ChhhHHHHHHHHHHHHhCCchhhhhHhh-CCcc
Confidence 87532 1345679999999988875 999999887543311 1122234457788888887642222211 2246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 147 ~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~ 223 (251)
T PRK14249 147 ALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GD 223 (251)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-Ce
Confidence 899999999999999999999999999999999999999999999984 5899999999986 57788999999985 79
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
+++.|+.
T Consensus 224 i~~~~~~ 230 (251)
T PRK14249 224 LVEYGRT 230 (251)
T ss_pred EEEeCCH
Confidence 9999875
No 367
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=5e-33 Score=318.41 Aligned_cols=215 Identities=25% Similarity=0.265 Sum_probs=175.2
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc-
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP- 924 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~- 924 (1444)
-+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAP--DAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCccc
Confidence 378899988763 23599999999999999999999999999999999998653 47999999987
Q ss_pred ----CCcc---c----ccceEEEEecCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-ccccc
Q 000524 925 ----KKQE---T----FARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSL 990 (1444)
Q Consensus 925 ----~~~~---~----~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~ 990 (1444)
+... . .++.++|++|+.. +.+.+|+.|++.+...... ..........+.++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVG--ARHYGDIRATAGDWLERVEIDAARIDDL 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhc--cCcHHHHHHHHHHHHHHcCCChhHHhCC
Confidence 4321 1 2346899999974 5677899999876432111 1122234456789999999974 45544
Q ss_pred ccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceE
Q 000524 991 VGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDEL 1069 (1444)
Q Consensus 991 vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v 1069 (1444)
+..||||||||++|||+|+.+|+||+|||||+|||+.+...+.+.|++++++ |.|||+++|++. .+.+.+|++
T Consensus 149 -----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i 222 (258)
T PRK11701 149 -----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRL 222 (258)
T ss_pred -----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEE
Confidence 4579999999999999999999999999999999999999999999998765 899999999986 566789999
Q ss_pred EEEecCcEEEEEcCC
Q 000524 1070 FLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1070 ~ll~~gg~~~y~G~~ 1084 (1444)
++|++ |++++.|+.
T Consensus 223 ~~l~~-g~i~~~~~~ 236 (258)
T PRK11701 223 LVMKQ-GRVVESGLT 236 (258)
T ss_pred EEEEC-CEEEEeCCH
Confidence 99986 899999875
No 368
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-33 Score=321.93 Aligned_cols=204 Identities=22% Similarity=0.301 Sum_probs=167.7
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC---ccceEEEEcCCCC-CCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV---PERTAAYISQHDN-HIGEM 241 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1444)
.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 4899999999999999999999999999999999999987 999999999876432 2457999999974 67888
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
|+++|+.|.....+... .+....++.+++.+||.+..++.+
T Consensus 100 ~v~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~----- 140 (269)
T PRK13648 100 IVKYDVAFGLENHAVPY----------------------------------DEMHRRVSEALKQVDMLERADYEP----- 140 (269)
T ss_pred cHHHHHHhhHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhhCCc-----
Confidence 99999988654321100 001123567789999987666544
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
+.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++....+.|+ +.++|...++.. +|+|++|++|
T Consensus 141 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~ti-iivtH~~~~~~~-~d~i~~l~~G 218 (269)
T PRK13648 141 NALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITI-ISITHDLSEAME-ADHVIVMNKG 218 (269)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEE-EEEecCchHHhc-CCEEEEEECC
Confidence 47999999999999999999999999999999999999999999998764334454 446666677765 9999999999
Q ss_pred eEEEecChhhHH
Q 000524 402 QIVYQGPRELVL 413 (1444)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1444)
++++.|+.+++.
T Consensus 219 ~i~~~g~~~~~~ 230 (269)
T PRK13648 219 TVYKEGTPTEIF 230 (269)
T ss_pred EEEEecCHHHHh
Confidence 999999988764
No 369
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=3.1e-33 Score=349.77 Aligned_cols=218 Identities=25% Similarity=0.321 Sum_probs=183.2
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++++|++++++ ++.+|+|+|+++++||++||+|||||||||||++|+|...+ .+|+|.++|.+..
T Consensus 5 i~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAFP-------------GVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEeC-------------CeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 77888887763 24699999999999999999999999999999999998653 4899999998754
Q ss_pred cc----cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000524 927 QE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 927 ~~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1001 (1444)
.. ..++.++|++|++.+++.+||+|++.|....+.. ...+.+..++.++++++.++|.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 21 1245689999999888999999999886432211 11223334456889999999988777664 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1081 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~ 1081 (1444)
|||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|.|||+++|++. ++.+.||++++|++ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999986 57789999999986 799999
Q ss_pred cCCCc
Q 000524 1082 GPLGR 1086 (1444)
Q Consensus 1082 G~~~~ 1086 (1444)
|+..+
T Consensus 223 ~~~~~ 227 (501)
T PRK10762 223 REVAD 227 (501)
T ss_pred cCcCc
Confidence 98754
No 370
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-32 Score=317.94 Aligned_cols=219 Identities=22% Similarity=0.290 Sum_probs=178.5
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 922 (1444)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 478999998874 24699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCc----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000524 923 YPKKQ----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 998 (1444)
Q Consensus 923 ~~~~~----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1444)
.++.. ...++.++|++|++.+++ .|++||+.+...... ....++....+.++++.+++.+..++... ..+..
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~ 163 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHK--LVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFR 163 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhcc--CCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCccc
Confidence 87642 134567899999988887 899999987643221 12333334456788999998753322211 12468
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEE
Q 000524 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1078 (1444)
Q Consensus 999 lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~ 1078 (1444)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 164 LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i 240 (276)
T PRK14271 164 LSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRL 240 (276)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999876 589999999986 57889999999986 799
Q ss_pred EEEcCC
Q 000524 1079 IYVGPL 1084 (1444)
Q Consensus 1079 ~y~G~~ 1084 (1444)
+..|+.
T Consensus 241 ~~~g~~ 246 (276)
T PRK14271 241 VEEGPT 246 (276)
T ss_pred EEeCCH
Confidence 999885
No 371
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=2.2e-33 Score=314.11 Aligned_cols=196 Identities=24% Similarity=0.337 Sum_probs=163.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC------ccceEEEEcCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------PERTAAYISQHDNHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d~~~ 238 (1444)
+.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 35999999999999999999999999999999999999987 999999999876432 135799999999888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+.+||+||+.+.....+... .+....++.+++.+||.+..++.+
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 135 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGASG----------------------------------DDIRRRVSAALDKVGLLDKAKNFP-- 135 (222)
T ss_pred ccccHHHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCCc--
Confidence 99999999988654321100 001123456788899987666544
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
..|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.+ . +++++.++|+.+++...+|+|++|
T Consensus 136 ---~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tiii~sH~~~~~~~~~d~i~~l 210 (222)
T PRK10908 136 ---IQLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-V-GVTVLMATHDIGLISRRSYRMLTL 210 (222)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-C-CCEEEEEeCCHHHHHHhCCEEEEE
Confidence 47999999999999999999999999999999999999999999998754 3 455666788888999999999999
Q ss_pred cCCeEE
Q 000524 399 SDGQIV 404 (1444)
Q Consensus 399 ~~G~iv 404 (1444)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999985
No 372
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-33 Score=316.91 Aligned_cols=219 Identities=18% Similarity=0.226 Sum_probs=177.5
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC--c-eEEEEEEEc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--G-YITGNITIS 921 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i~ 921 (1444)
..+..+++++.+. ++.+|+|+|+.++|||+++|+|+||||||||+++|+|...+ + +.+|+|.++
T Consensus 7 ~~~~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~ 73 (261)
T PRK14263 7 IVMDCKLDKIFYG-------------NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFL 73 (261)
T ss_pred ceEEEEeEEEEeC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEEC
Confidence 3466677666552 35699999999999999999999999999999999997643 1 258999999
Q ss_pred CccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000524 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 996 (1444)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1444)
|.++.. ..+++.++|++|++.++ .+|+.||+.+....+. . .....+.++++++.++|.+..+...+ ...
T Consensus 74 g~~i~~~~~~~~~~~~~i~~v~q~~~~~-~~tv~enl~~~~~~~~---~-~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~ 147 (261)
T PRK14263 74 GQDVYGKGVDPVVVRRYIGMVFQQPNPF-SMSIFDNVAFGLRLNR---Y-KGDLGDRVKHALQGAALWDEVKDKLK-VSG 147 (261)
T ss_pred CEeccccccchHhhhhceEEEecCCccc-cccHHHHHHHHHhhcC---c-hHHHHHHHHHHHHHcCCchhhhhhhh-CCc
Confidence 987632 13456799999998877 5999999988755432 1 12234568899999998654332222 234
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe---
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK--- 1073 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~--- 1073 (1444)
+.||||||||++|||||+++|++|+|||||+|||+.++..+.+.|+++. +++|||+++|++. ++.+.+|++++|+
T Consensus 148 ~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~ 225 (261)
T PRK14263 148 LSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDI 225 (261)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 6899999999999999999999999999999999999999999999985 4799999999986 5788999999996
Q ss_pred ----cCcEEEEEcCC
Q 000524 1074 ----RGGQEIYVGPL 1084 (1444)
Q Consensus 1074 ----~gg~~~y~G~~ 1084 (1444)
++|+++..|+.
T Consensus 226 ~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 226 SQGTRTGYLVEMGPT 240 (261)
T ss_pred ccccCCceEEEeCCH
Confidence 46899999985
No 373
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-33 Score=327.02 Aligned_cols=211 Identities=20% Similarity=0.284 Sum_probs=168.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCeecEEEECCccCCCC-----CccceEEEEcCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1444)
..+|+|+|+.|++|++++|+|||||||||||++|+|..++. ...+|+|.++|+++... ..++.++||+|++.+
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35899999999999999999999999999999999998631 02389999999998632 235679999999877
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1444)
+ +.||+||+.|+....+... .+ ..+..++.+++.++|.+..++.++
T Consensus 175 ~-~~ti~eNi~~~~~~~~~~~-~~--------------------------------~~~~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 F-EMSIFDNVAYGPRNNGIND-RK--------------------------------ILEKIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred C-CCcHHHHHHhHHHhcCCCh-HH--------------------------------HHHHHHHHHHHHcCCcchhhhhhh
Confidence 7 4899999998643321100 00 001123456677777654455665
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1444)
. ....|||||||||+||||++.+|+|++|||||+|||+.+...+.++|+++.+ + .+|+.++|....+.+.+|+|++
T Consensus 221 ~-~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~-~Tii~iTH~l~~i~~~~Driiv 296 (329)
T PRK14257 221 K-AGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--K-YSIIIVTHSMAQAQRISDETVF 296 (329)
T ss_pred C-CcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEE
Confidence 4 4558999999999999999999999999999999999999999999998753 3 4566678888888999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000524 398 LSDGQIVYQGPRELVL 413 (1444)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1444)
|++|++++.|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999874
No 374
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-33 Score=317.52 Aligned_cols=200 Identities=24% Similarity=0.375 Sum_probs=166.2
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC---ccceEEEEcCCCCCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV---PERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~lT 242 (1444)
.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 5899999999999999999999999999999999999987 999999998875432 2457999999987776 69
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc-ccccccccCccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTMVGDEMI 321 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~~~~ 321 (1444)
|+||+.++....+ . ....++.+++.+||+ +..++ ..
T Consensus 93 v~e~l~~~~~~~~--~------------------------------------~~~~~~~~l~~~~l~~~~~~~-----~~ 129 (241)
T PRK14250 93 VKDNIEYGPMLKG--E------------------------------------KNVDVEYYLSIVGLNKEYATR-----DV 129 (241)
T ss_pred HHHHHhcchhhcC--c------------------------------------HHHHHHHHHHHcCCCHHHhhC-----Cc
Confidence 9999987532110 0 001245678889996 34443 34
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
..|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++....+. +|+.++|+.+++.+++|+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~-tii~~sH~~~~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNL-TVIWITHNMEQAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCC-EEEEEeccHHHHHHhCCEEEEEeCC
Confidence 579999999999999999999999999999999999999999999987653344 5555788888899999999999999
Q ss_pred eEEEecChhhHH
Q 000524 402 QIVYQGPRELVL 413 (1444)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1444)
+++..|+.+++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999988763
No 375
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.9e-33 Score=312.31 Aligned_cols=194 Identities=30% Similarity=0.444 Sum_probs=160.1
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC---ccceEEEEcCCCC-CCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV---PERTAAYISQHDN-HIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 46999999999999999999999999999999999999987 999999998876432 2357999999874 4678
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
+||+||+.++....+... .+....++.+++.+||++..+..+
T Consensus 91 ~t~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 132 (211)
T cd03225 91 PTVEEEVAFGLENLGLPE----------------------------------EEIEERVEEALELVGLEGLRDRSP---- 132 (211)
T ss_pred CcHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCcHhhhcCCc----
Confidence 999999988643221000 001123566788999987666544
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++. . +++|+.++|+.+++..++|+|++|++
T Consensus 133 -~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~ 209 (211)
T cd03225 133 -FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKA-E-GKTIIIVTHDLDLLLELADRVIVLED 209 (211)
T ss_pred -ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-c-CCEEEEEeCCHHHHHHhCCEEEEEeC
Confidence 46999999999999999999999999999999999999999999998865 3 45566678888899999999999999
Q ss_pred Ce
Q 000524 401 GQ 402 (1444)
Q Consensus 401 G~ 402 (1444)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 376
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-33 Score=321.91 Aligned_cols=215 Identities=20% Similarity=0.277 Sum_probs=175.2
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 922 (1444)
.+.++|+++.++ ...+|+|+|+.|++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 588999988773 2359999999999999999999999999999999999642 1 12589999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 993 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1444)
.++.. ...++.++|++|++.+++. ||.||+.+....+.. .+....++.+.++++.+++.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~--- 179 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGI--NDKKQLEEIVEKSLRKAALWDEVSDRLDKN--- 179 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCC--CcHHHHHHHHHHHHHHhCCccchhhHhhCC---
Confidence 87532 1245679999999988874 999999986543211 122233456788899988742 23332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe
Q 000524 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1073 (1444)
Q Consensus 994 ~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~ 1073 (1444)
+..||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 180 --~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~ 255 (286)
T PRK14275 180 --ALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFY 255 (286)
T ss_pred --hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 689999999986 5778899999998
Q ss_pred cCcEEEEEcCC
Q 000524 1074 RGGQEIYVGPL 1084 (1444)
Q Consensus 1074 ~gg~~~y~G~~ 1084 (1444)
+ |+++..|+.
T Consensus 256 ~-G~i~~~g~~ 265 (286)
T PRK14275 256 E-GVLVEHAPT 265 (286)
T ss_pred C-CEEEEeCCH
Confidence 6 799999875
No 377
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-33 Score=320.09 Aligned_cols=215 Identities=20% Similarity=0.256 Sum_probs=174.9
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 922 (1444)
-+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 478999988774 2359999999999999999999999999999999999632 1 13579999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 993 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1444)
.++.. ..+++.++|++|++.+++. |++||+.+...... .......++.++++++.+++.+ ..+..
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--- 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAG--ERRKSVLDEIVEESLTKAALWDEVKDRLHSS--- 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCCcchHHHHhcC---
Confidence 87642 1245679999999888874 99999987643221 1112233455788899998853 22332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe
Q 000524 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1073 (1444)
Q Consensus 994 ~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~ 1073 (1444)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 162 --~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~ 237 (268)
T PRK14248 162 --ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFL 237 (268)
T ss_pred --cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEE
Confidence 467999999999999999999999999999999999999999999999865 689999999986 5788999999998
Q ss_pred cCcEEEEEcCC
Q 000524 1074 RGGQEIYVGPL 1084 (1444)
Q Consensus 1074 ~gg~~~y~G~~ 1084 (1444)
+ |++++.|+.
T Consensus 238 ~-G~i~~~~~~ 247 (268)
T PRK14248 238 N-GDLVEYDQT 247 (268)
T ss_pred C-CEEEEeCCH
Confidence 5 799999875
No 378
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=8.8e-32 Score=349.48 Aligned_cols=212 Identities=27% Similarity=0.414 Sum_probs=178.0
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++++|++|.++. +.+.+|+|+|+.++|||++||+|+||||||||+++|+|...+ .+|+|.+||.+
T Consensus 454 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p--~~G~I~idg~~ 520 (694)
T TIGR01846 454 GAITFENIRFRYAP-----------DSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTP--QHGQVLVDGVD 520 (694)
T ss_pred CeEEEEEEEEEcCC-----------CCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEe
Confidence 46999999999852 124599999999999999999999999999999999998664 48999999998
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 994 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1444)
+++ ..+++.++||+|++.+++ .|++||+.+.. + +.+ ++.++++++..++.+. .|+.+|..
T Consensus 521 i~~~~~~~~r~~i~~v~q~~~lf~-~ti~eNi~~~~----~-~~~----~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~ 590 (694)
T TIGR01846 521 LAIADPAWLRRQMGVVLQENVLFS-RSIRDNIALCN----P-GAP----FEHVIHAAKLAGAHDFISELPQGYNTEVGEK 590 (694)
T ss_pred hhhCCHHHHHHhCeEEccCCeehh-hhHHHHHhcCC----C-CCC----HHHHHHHHHHcChHHHHHhCcCccCcEecCC
Confidence 654 356778999999988876 69999997631 1 222 2346677777776554 46666654
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
..+||||||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ....||++++|++
T Consensus 591 -g~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~-~~~t~i~itH~~~--~~~~~d~ii~l~~ 666 (694)
T TIGR01846 591 -GANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC-RGRTVIIIAHRLS--TVRACDRIIVLEK 666 (694)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEeCChH--HHHhCCEEEEEeC
Confidence 46899999999999999999999999999999999999999999999984 5899999999985 4567999999986
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|++++.|+.
T Consensus 667 -G~i~~~g~~ 675 (694)
T TIGR01846 667 -GQIAESGRH 675 (694)
T ss_pred -CEEEEeCCH
Confidence 899999985
No 379
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-33 Score=319.56 Aligned_cols=206 Identities=19% Similarity=0.304 Sum_probs=165.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CeecEEEECCccCCCCC-----ccceEEEEcCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHDMGEFV-----PERTAAYISQHDNH 237 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~--~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1444)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|.. ..+|+|.++|+++.... .++.++|++|++.+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 104 (258)
T PRK14268 25 KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNP 104 (258)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCcc
Confidence 358999999999999999999999999999999999987510 13899999998875321 24569999999887
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc----cccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE----VCAD 313 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1444)
++ +||+||+.|+.+..+... . +....++.+++.+|+. +..+
T Consensus 105 ~~-~tv~enl~~~~~~~~~~~----------~------------------------~~~~~~~~~l~~~~l~~~~~~~~~ 149 (258)
T PRK14268 105 FP-MSIYDNVAYGPRIHGANK----------K------------------------DLDGVVENALRSAALWDETSDRLK 149 (258)
T ss_pred Cc-ccHHHHHHHHHHHcCCCH----------H------------------------HHHHHHHHHHHHcCCCcchhhhhc
Confidence 77 899999998654321100 0 0012356678888874 2334
Q ss_pred ccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcC
Q 000524 314 TMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFD 393 (1444)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD 393 (1444)
+ .++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+++|
T Consensus 150 ~-----~~~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~-~tiiivsH~~~~~~~~~d 221 (258)
T PRK14268 150 S-----PALSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK--D-YTIVIVTHNMQQAARISD 221 (258)
T ss_pred C-----ChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHHhCC
Confidence 3 3457999999999999999999999999999999999999999999998742 4 555667888888999999
Q ss_pred eEEEEcCCeEEEecChhhHH
Q 000524 394 DIILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1444)
+|++|++|++++.|+.+++.
T Consensus 222 ~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 222 YTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999988763
No 380
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-33 Score=314.28 Aligned_cols=204 Identities=27% Similarity=0.414 Sum_probs=171.2
Q ss_pred EeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCHHH
Q 000524 167 ILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTVRE 245 (1444)
Q Consensus 167 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 245 (1444)
+|+|+|+.++|||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|++|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999997 9999999998765432 467999999998999999999
Q ss_pred HHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccc
Q 000524 246 TLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGIS 325 (1444)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1444)
|+.++....+... .+....++++++.+||.+..++.+ +.||
T Consensus 91 ~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 131 (235)
T cd03299 91 NIAYGLKKRKVDK----------------------------------KEIERKVLEIAEMLGIDHLLNRKP-----ETLS 131 (235)
T ss_pred HHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhHHhcCc-----ccCC
Confidence 9988643221000 001123456788999987777655 4699
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEEE
Q 000524 326 GGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1444)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~ 405 (1444)
|||||||+||+|++.+|++++|||||+|||+.++..+.+.|++++...+.| ++.++|..+++.+.+|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~t-ili~tH~~~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVT-VLHVTHDFEEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHHHHhCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999986533445 5556777788899999999999999999
Q ss_pred ecChhhHH
Q 000524 406 QGPRELVL 413 (1444)
Q Consensus 406 ~G~~~~~~ 413 (1444)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987664
No 381
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-33 Score=316.41 Aligned_cols=215 Identities=25% Similarity=0.337 Sum_probs=175.1
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC--c-eEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--G-YITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g 922 (1444)
.+.++|+++.+. .+.+|+|+|++|++||+++|+|+||||||||+++|+|...+ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 378899988773 24699999999999999999999999999999999997641 1 2589999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 993 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1444)
.+... ...++.++|++|++.+++ .||+||+.+....+. ....+..++.++++++.+++.. ..+.
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 143 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAG--VKDKELIDQRVEESLKQAAIWKETKDNLDR---- 143 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcC--CCCHHHHHHHHHHHHHHcCCCcchHHHhcc----
Confidence 87532 124567899999988776 799999987643321 1122333456788999999853 2232
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe
Q 000524 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1073 (1444)
Q Consensus 994 ~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~ 1073 (1444)
....||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|++. ++.+.+|++++|+
T Consensus 144 -~~~~LS~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~ 220 (251)
T PRK14251 144 -NAQAFSGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLM 220 (251)
T ss_pred -ChhhCCHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEE
Confidence 2468999999999999999999999999999999999999999999999854 799999999986 5788899999998
Q ss_pred cCcEEEEEcCC
Q 000524 1074 RGGQEIYVGPL 1084 (1444)
Q Consensus 1074 ~gg~~~y~G~~ 1084 (1444)
+ |+++..|+.
T Consensus 221 ~-G~i~~~~~~ 230 (251)
T PRK14251 221 N-GDLIEAGPT 230 (251)
T ss_pred C-CEEEEeCCH
Confidence 5 799988875
No 382
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-33 Score=311.36 Aligned_cols=195 Identities=25% Similarity=0.371 Sum_probs=163.0
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 000524 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1444)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1444)
|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999987 9999999998765432 367999999999999999999998
Q ss_pred HhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccchhh
Q 000524 249 FSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGE 328 (1444)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1444)
++..... ... + +.+..++++++.+||++..++.+ ..|||||
T Consensus 93 ~~~~~~~-~~~--------~-------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~ 133 (211)
T cd03298 93 LGLSPGL-KLT--------A-------------------------EDRQAIEVALARVGLAGLEKRLP-----GELSGGE 133 (211)
T ss_pred ccccccc-Ccc--------H-------------------------HHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHH
Confidence 7542110 000 0 01123567889999987776654 4799999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEEEec
Q 000524 329 RKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQG 407 (1444)
Q Consensus 329 rqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G 407 (1444)
|||++||++++.+|++++|||||+|||..++..+.+.|+++++..+ .+|+.++|+..++.+++|++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~-~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETK-MTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999999999998865334 45555788888999999999999999998764
No 383
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-33 Score=322.55 Aligned_cols=205 Identities=21% Similarity=0.310 Sum_probs=166.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC-------ccceEEEEcCCCC-
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHDN- 236 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~- 236 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35899999999999999999999999999999999999987 999999999875421 2356999999862
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcc-ccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV-CADTM 315 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~ 315 (1444)
.+...||+||+.+.....+... .+....++.+++.+||.. ..+..
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 142 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVSQ----------------------------------EEAEALAREKLALVGISESLFEKN 142 (280)
T ss_pred hhccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhhhhCC
Confidence 3334799999988643221100 001123566788899963 44443
Q ss_pred ccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeE
Q 000524 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1444)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1444)
++.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ .+ ++|+.++|...++.+++|++
T Consensus 143 -----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiiivsH~~~~~~~~~d~i 215 (280)
T PRK13649 143 -----PFELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-SG-MTIVLVTHLMDDVANYADFV 215 (280)
T ss_pred -----cccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeccHHHHHHhCCEE
Confidence 457999999999999999999999999999999999999999999998864 34 45555778888888999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000524 396 ILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1444)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 384
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-33 Score=313.50 Aligned_cols=206 Identities=28% Similarity=0.333 Sum_probs=172.3
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC-ccceEEEEcCCCCCCCCCCH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-PERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV 243 (1444)
+++|+|+|+.++||++++|+||||||||||+++|+|.++|+ +|+|+++|+++.+.. .++.++|++|++..++.+|+
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 35999999999999999999999999999999999999987 999999999876533 24679999999988889999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
+||+.+.....+... ......++.+++.+||++..++.+ ..
T Consensus 90 ~~nl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (232)
T cd03300 90 FENIAFGLRLKKLPK----------------------------------AEIKERVAEALDLVQLEGYANRKP-----SQ 130 (232)
T ss_pred HHHHHHHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCchhhcCCh-----hh
Confidence 999988654321100 001123567889999987776554 47
Q ss_pred cchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000524 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1444)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++....+.|+|+ ++|...++.+.+|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii-~sh~~~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVF-VTHDQEEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEE-EeCCHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999886533445554 67777888999999999999999
Q ss_pred EEecChhhHH
Q 000524 404 VYQGPRELVL 413 (1444)
Q Consensus 404 v~~G~~~~~~ 413 (1444)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999877663
No 385
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=3.5e-33 Score=312.76 Aligned_cols=197 Identities=23% Similarity=0.318 Sum_probs=166.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCCHH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMTVR 244 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 244 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .+.++|++|++.+++.+|++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 46999999999999999999999999999999999999987 999999998775422 35799999999889999999
Q ss_pred HHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccccc
Q 000524 245 ETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGI 324 (1444)
Q Consensus 245 E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~L 324 (1444)
||+.+.....+.. +..+..+++.+||++..|..+ ..|
T Consensus 89 ~~~~~~~~~~~~~--------------------------------------~~~~~~~l~~~~l~~~~~~~~-----~~L 125 (223)
T TIGR03740 89 ENLKVHTTLLGLP--------------------------------------DSRIDEVLNIVDLTNTGKKKA-----KQF 125 (223)
T ss_pred HHHHHHHHHcCCC--------------------------------------HHHHHHHHHHcCCcHHHhhhH-----hhC
Confidence 9998764322100 012456788899987666544 469
Q ss_pred chhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEE
Q 000524 325 SGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIV 404 (1444)
Q Consensus 325 SGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv 404 (1444)
|||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++.. .+.| |+.++|+..++.+.+|+|++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~~t-iii~sH~~~~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QGIT-VILSSHILSEVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CCCE-EEEEcCCHHHHHHhcCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999998754 3444 555677778889999999999999999
Q ss_pred EecChh
Q 000524 405 YQGPRE 410 (1444)
Q Consensus 405 ~~G~~~ 410 (1444)
+.|+..
T Consensus 204 ~~~~~~ 209 (223)
T TIGR03740 204 YQGKIN 209 (223)
T ss_pred EecChh
Confidence 999864
No 386
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.8e-33 Score=308.71 Aligned_cols=202 Identities=23% Similarity=0.276 Sum_probs=172.4
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
-+.++|+++.++ ++.+|+++|+.+++||+++|+|+||||||||+++|+|...+ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSRN-------------EEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEecC-------------CceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 478899987763 23599999999999999999999999999999999998653 479999999876
Q ss_pred CcccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000524 926 KQETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 1005 (1444)
Q Consensus 926 ~~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1005 (1444)
.....++.++|++|++.+++.+|+.|++.+....+. .. .++.++++++.++|.+..++.+ ..||+||||
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~---~~---~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 144 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHG---RR---AKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKK 144 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcC---Cc---HHHHHHHHHHHcCChhhccCCh-----hhCCHHHHH
Confidence 543344568999999988888999999987654321 11 2234678899999987777664 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 1006 Rl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
|++||++++.+|++|+|||||+|||+.+...+.+.|+++.++|+|||+++|++. ++.+.+|+++++..
T Consensus 145 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~~ 212 (214)
T PRK13543 145 RLALARLWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLEA 212 (214)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEee
Confidence 999999999999999999999999999999999999998888999999999996 68899999999863
No 387
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-33 Score=310.24 Aligned_cols=224 Identities=22% Similarity=0.310 Sum_probs=180.7
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCC-C-c-eEEEEEEEcCc
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT-G-G-YITGNITISGY 923 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~-~-~-~~~G~i~i~g~ 923 (1444)
++.+|++.++.... +...+++||||++++||++||+|.|||||||+.++|.|... + + ..+|+|.++|.
T Consensus 2 L~v~nL~v~f~~~~---------g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~ 72 (316)
T COG0444 2 LEVKNLSVSFPTDA---------GVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGK 72 (316)
T ss_pred ceEeeeEEEEecCC---------ccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCc
Confidence 45677776665321 24579999999999999999999999999999999999765 2 2 46789999998
Q ss_pred cCCc---c---c-ccceEEEEecCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000524 924 PKKQ---E---T-FARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLP 994 (1444)
Q Consensus 924 ~~~~---~---~-~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 994 (1444)
++-. + . +-+.+++++|++. +.|.+||.+-+.=......... ..++..+.+.++|+.+|+.+....+ +.
T Consensus 73 ~l~~l~~~~~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~-~~~ea~~~a~~~L~~Vgi~~~~~~~--~~ 149 (316)
T COG0444 73 DLLSLSEKELRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGL-SKKEAKERAIELLELVGIPDPERRL--KS 149 (316)
T ss_pred ccccCCHHHHHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcch-hhHHHHHHHHHHHHHcCCCCHHHHH--hh
Confidence 6432 2 1 2357899999975 5688999887765444322111 3445566789999999998753322 22
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhcceEEEEe
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPGIDIFDAFDELFLMK 1073 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~-~g~tvi~t~Hqps~~i~~~fD~v~ll~ 1073 (1444)
....|||||||||.||.||+.+|++|+.||||++||...+++|++.|+++.+ .|.|+|++|||.. -+.+.||||.||.
T Consensus 150 YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~-vva~~aDri~VMY 228 (316)
T COG0444 150 YPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLG-VVAEIADRVAVMY 228 (316)
T ss_pred CCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceEEEEE
Confidence 3568999999999999999999999999999999999999999999999986 5999999999997 4889999999998
Q ss_pred cCcEEEEEcCC
Q 000524 1074 RGGQEIYVGPL 1084 (1444)
Q Consensus 1074 ~gg~~~y~G~~ 1084 (1444)
. |++|+.|+.
T Consensus 229 a-G~iVE~g~~ 238 (316)
T COG0444 229 A-GRIVEEGPV 238 (316)
T ss_pred C-cEEEEeCCH
Confidence 5 899999996
No 388
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.2e-33 Score=315.29 Aligned_cols=219 Identities=24% Similarity=0.319 Sum_probs=174.2
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCC--Cc-eEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--GG-YITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~~-~~~G~i~i~g 922 (1444)
-+.++|+++.++ .+.+|+|+|+++++||+++|+|+||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 378899988763 2469999999999999999999999999999999999643 11 2479999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
.++.. ...++.++|++|++.+++ .|++|++.+....+.. ...+..++.+.+.++.+++......... ..+.
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~--~~~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~ 147 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGV--KDKAVLDEAVETSLKQAAIWDEVKDHLH-ESAL 147 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCC--CCHHHHHHHHHHHHHHcCCccchhhHHh-cCcc
Confidence 87632 234567999999988887 6999999886543321 1222223456778888887432111111 1246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||+++|++. ++.+.+|++++|++ |+
T Consensus 148 ~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 224 (252)
T PRK14255 148 SLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFLT-GN 224 (252)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEEC-CE
Confidence 7999999999999999999999999999999999999999999999865 589999999986 57788999999985 79
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
++..|+.
T Consensus 225 i~~~~~~ 231 (252)
T PRK14255 225 LIEFADT 231 (252)
T ss_pred EEEeCCH
Confidence 9998875
No 389
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-33 Score=320.51 Aligned_cols=204 Identities=27% Similarity=0.384 Sum_probs=168.8
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCC--C---ccceEEEEcCCCC-CCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF--V---PERTAAYISQHDN-HIG 239 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~--~---~~~~~~yv~Q~d~-~~~ 239 (1444)
.+|+|+|+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++... . .++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 5899999999999999999999999999999999999987 99999999987421 1 2457999999863 344
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000524 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1444)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1444)
.+||+||+.++....+. .+ .+....+..+++.+||++..++.++
T Consensus 93 ~~tv~e~i~~~~~~~~~-~~---------------------------------~~~~~~~~~~l~~~~L~~~~~~~~~-- 136 (275)
T PRK13639 93 APTVEEDVAFGPLNLGL-SK---------------------------------EEVEKRVKEALKAVGMEGFENKPPH-- 136 (275)
T ss_pred cccHHHHHHHHHHHcCC-CH---------------------------------HHHHHHHHHHHHHCCCchhhcCChh--
Confidence 57999999875322110 00 0011235678899999877776554
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+ . +++|+.++|+..++.+++|++++|+
T Consensus 137 ---~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~-~~til~vtH~~~~~~~~~d~i~~l~ 211 (275)
T PRK13639 137 ---HLSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-E-GITIIISTHDVDLVPVYADKVYVMS 211 (275)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-C-CCEEEEEecCHHHHHHhCCEEEEEE
Confidence 6999999999999999999999999999999999999999999999864 3 4556667888888999999999999
Q ss_pred CCeEEEecChhhHH
Q 000524 400 DGQIVYQGPRELVL 413 (1444)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1444)
+|++++.|+.+++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999998874
No 390
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-33 Score=350.14 Aligned_cols=219 Identities=26% Similarity=0.308 Sum_probs=182.5
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
-++++|+++.+. ++.+|+|+||++++||++||+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSFG-------------PVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEP--TKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEcC-------------CeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCC--CccEEEECCEEC
Confidence 378889888763 24699999999999999999999999999999999998653 489999999876
Q ss_pred Ccc----cccceEEEEecCCCCCCCCcHHHHHHHHHHhc----CCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 926 KQE----TFARISGYCEQNDIHSPFVTVYESLLYSAWLR----LPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 926 ~~~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr----~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
... ..++.++|++|++.+++.+||+|++.+..... .....+.++.++.++++++.+||.+..++.+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 432 12346899999998899999999998753211 0000122334456889999999988777764 5
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++||++|+.+|+||+|||||+|||+.++..+++.|++++++|.|||+++|++. ++.+.||++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999878999999999986 57788999999985 79
Q ss_pred EEEEcCCCc
Q 000524 1078 EIYVGPLGR 1086 (1444)
Q Consensus 1078 ~~y~G~~~~ 1086 (1444)
+++.|+..+
T Consensus 223 i~~~g~~~~ 231 (510)
T PRK09700 223 SVCSGMVSD 231 (510)
T ss_pred Eeeecchhh
Confidence 999998743
No 391
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-33 Score=320.82 Aligned_cols=205 Identities=25% Similarity=0.335 Sum_probs=168.2
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCC--CC---ccceEEEEcCCCC-CC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGE--FV---PERTAAYISQHDN-HI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~--~~---~~~~~~yv~Q~d~-~~ 238 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.. .. .++.++|++|++. .+
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 35899999999999999999999999999999999999987 9999999998742 11 1357999999875 34
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
...|+.||+.+..+..+... .+....++.+++.+||++..++.+
T Consensus 91 ~~~~~~~~l~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 134 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVPE----------------------------------AEITRRVDEALTLVDAQHFRHQPI-- 134 (271)
T ss_pred ccccHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhcCCc--
Confidence 55689999988643221100 001123566788999987766554
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ ++|+.++|+..++.+++|++++|
T Consensus 135 ---~~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g-~tii~vtH~~~~~~~~~d~i~~l 209 (271)
T PRK13638 135 ---QCLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QG-NHVIISSHDIDLIYEISDAVYVL 209 (271)
T ss_pred ---hhCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 46999999999999999999999999999999999999999999999764 34 45566788888899999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 210 RQGQILTHGAPGEVF 224 (271)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988764
No 392
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-33 Score=317.50 Aligned_cols=213 Identities=23% Similarity=0.306 Sum_probs=169.2
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCeecEEEECCccCCCCC---ccceEEEEcCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFV---PERTAAYISQHDNHIG 239 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 239 (1444)
.++|+|+|+.+++|++++|+||||||||||+++|+|.++|. ...+|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 35899999999999999999999999999999999998741 123899999999876432 2457999999998899
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCc
Q 000524 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDE 319 (1444)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~ 319 (1444)
.+||+||+.++.+..+.... . .+....++++++.+||.+..+... +.
T Consensus 96 ~~tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~~ 142 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVKS--------K------------------------KELQERVRWALEKAQLWDEVKDRL-DA 142 (250)
T ss_pred CCcHHHHHHHHHHhccccCC--------H------------------------HHHHHHHHHHHHHcCCCcchhhhh-cC
Confidence 99999999986543210000 0 001123566788899864211111 23
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
.+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ ++++.++|+..++.+.+|+|++|+
T Consensus 143 ~~~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l~ 219 (250)
T PRK14247 143 PAGKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELK--KD-MTIVLVTHFPQQAARISDYVAFLY 219 (250)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHHhcCEEEEEE
Confidence 445799999999999999999999999999999999999999999999874 24 455667788888899999999999
Q ss_pred CCeEEEecChhhHH
Q 000524 400 DGQIVYQGPRELVL 413 (1444)
Q Consensus 400 ~G~iv~~G~~~~~~ 413 (1444)
+|++++.|+.+++.
T Consensus 220 ~G~i~~~g~~~~~~ 233 (250)
T PRK14247 220 KGQIVEWGPTREVF 233 (250)
T ss_pred CCeEEEECCHHHHH
Confidence 99999999988764
No 393
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.6e-33 Score=319.36 Aligned_cols=205 Identities=23% Similarity=0.330 Sum_probs=169.2
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCC----------------CccceE
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF----------------VPERTA 228 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~----------------~~~~~~ 228 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 45999999999999999999999999999999999999987 99999999877421 113579
Q ss_pred EEEcCCCCCCCCCCHHHHHHHhhh-hcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhC
Q 000524 229 AYISQHDNHIGEMTVRETLAFSAR-CQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG 307 (1444)
Q Consensus 229 ~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg 307 (1444)
+|++|++.+++.+||+||+.++.. ..... . .+....+.++++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS-K---------------------------------QEARERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC-H---------------------------------HHHHHHHHHHHHHcC
Confidence 999999999999999999987532 11100 0 001223567889999
Q ss_pred Ccccc-cccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCch
Q 000524 308 LEVCA-DTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAP 386 (1444)
Q Consensus 308 L~~~~-dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~ 386 (1444)
|.+.. +. ..+.||||||||++||+||+.+|++++|||||+|||+.+...+.+.|++++. . +.+|+.++|+..
T Consensus 141 l~~~~~~~-----~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~-g~tiiivsH~~~ 213 (257)
T PRK10619 141 IDERAQGK-----YPVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-E-GKTMVVVTHEMG 213 (257)
T ss_pred CChhhhhC-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHH
Confidence 97643 43 3457999999999999999999999999999999999999999999998864 3 455555778888
Q ss_pred hHHhhcCeEEEEcCCeEEEecChhhHH
Q 000524 387 ETYDLFDDIILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 387 ~~~~~fD~vilL~~G~iv~~G~~~~~~ 413 (1444)
++.+++|+|++|++|++++.|+.+++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 888999999999999999999988764
No 394
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-33 Score=320.74 Aligned_cols=210 Identities=24% Similarity=0.360 Sum_probs=170.9
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 35999999999999999999999999999999999999987 9999999988754322 35699999998888999
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
||.||+.++..... .. .+ .. . ......++.+++.+||++..++.++
T Consensus 101 tv~e~l~~~~~~~~-~~--------------~~-~~-~-------------~~~~~~~~~~l~~~~l~~~~~~~~~---- 146 (265)
T PRK10575 101 TVRELVAIGRYPWH-GA--------------LG-RF-G-------------AADREKVEEAISLVGLKPLAHRLVD---- 146 (265)
T ss_pred cHHHHHHhCccccc-cc--------------cc-CC-C-------------HHHHHHHHHHHHHcCCHHHhcCCcc----
Confidence 99999987532100 00 00 00 0 0011235678899999876666554
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|++++...+ ++|+.++|..+++.+.+|+|++|++|
T Consensus 147 -~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~-~tiii~sH~~~~i~~~~d~i~~l~~G 224 (265)
T PRK10575 147 -SLSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERG-LTVIAVLHDINMAARYCDYLVALRGG 224 (265)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 6999999999999999999999999999999999999999999999865334 45555778888999999999999999
Q ss_pred eEEEecChhhHH
Q 000524 402 QIVYQGPRELVL 413 (1444)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1444)
++++.|+.+++.
T Consensus 225 ~i~~~~~~~~~~ 236 (265)
T PRK10575 225 EMIAQGTPAELM 236 (265)
T ss_pred eEEEecCHHHhc
Confidence 999999887653
No 395
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.8e-33 Score=357.90 Aligned_cols=206 Identities=21% Similarity=0.276 Sum_probs=166.7
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1444)
++|+|+|++++|||.++|+|+||||||||+++|+|.++|+ +|+|.+||+++++..+ ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 4899999999999999999999999999999999999998 9999999999887654 5789999999988875 9
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
++|||.++.. . . .+...+.+ ...+ .++.++. |++..||.+|+.+ .
T Consensus 431 i~~NI~~~~~---~-~-d~~i~~a~---------------------~~~g------l~~~i~~--lp~Gldt~i~e~g-~ 475 (592)
T PRK10790 431 FLANVTLGRD---I-S-EEQVWQAL---------------------ETVQ------LAELARS--LPDGLYTPLGEQG-N 475 (592)
T ss_pred HHHHHHhCCC---C-C-HHHHHHHH---------------------HHcC------cHHHHHh--ccccccccccCCC-C
Confidence 9999998631 0 0 01111111 0000 1112222 5667899999854 4
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.||||||||++|||||+++|++++||||||+||+.++..|.+.|+++. .++|+|+..|++ +....+|+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~--~~~tvIivtHr~--~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVR--EHTTLVVIAHRL--STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--CCCEEEEEecch--HHHHhCCEEEEEECCE
Confidence 799999999999999999999999999999999999999999998864 346666654443 5567799999999999
Q ss_pred EEEecChhhHHH
Q 000524 403 IVYQGPRELVLE 414 (1444)
Q Consensus 403 iv~~G~~~~~~~ 414 (1444)
++..|+++++++
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999999864
No 396
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2.4e-33 Score=358.42 Aligned_cols=210 Identities=21% Similarity=0.337 Sum_probs=179.5
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++++|++|.++. ++.+|+|+|++++|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 339 ~~i~~~~v~f~y~~------------~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 404 (592)
T PRK10790 339 GRIDIDNVSFAYRD------------DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRP 404 (592)
T ss_pred CeEEEEEEEEEeCC------------CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEE
Confidence 46999999999851 13599999999999999999999999999999999998764 47999999998
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc-------cccccCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI-------QSLVGLP 994 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~-------~~~vg~~ 994 (1444)
+++ ..+++.++||+|++.+++. |++||+.++. +.+ ++.++++++.+|+.+.. |+.+|..
T Consensus 405 i~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~------~~~----d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~ 473 (592)
T PRK10790 405 LSSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR------DIS----EEQVWQALETVQLAELARSLPDGLYTPLGEQ 473 (592)
T ss_pred hhhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC------CCC----HHHHHHHHHHcCcHHHHHhccccccccccCC
Confidence 654 3567889999999999875 9999998752 122 23478889998877644 5566653
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
..+||||||||++|||||+++|+||+||||||+||+.+++.|.+.|+++.+ ++|+|+++|+++ ....||+|++|++
T Consensus 474 -g~~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~ 549 (592)
T PRK10790 474 -GNNLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR 549 (592)
T ss_pred -CCCCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC
Confidence 467999999999999999999999999999999999999999999998854 699999999984 5778999999985
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 550 -G~i~~~G~~ 558 (592)
T PRK10790 550 -GQAVEQGTH 558 (592)
T ss_pred -CEEEEEcCH
Confidence 899999985
No 397
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=4.6e-33 Score=319.91 Aligned_cols=207 Identities=20% Similarity=0.247 Sum_probs=169.2
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCC--CCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN--HIG 239 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 239 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999997 9999999988753221 246999999874 567
Q ss_pred CCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc-ccccccccC
Q 000524 240 EMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTMVGD 318 (1444)
Q Consensus 240 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~vg~ 318 (1444)
.+||.|++.+..+....... .+....++.+++.+||. +..++.+
T Consensus 103 ~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~~-- 147 (267)
T PRK15112 103 RQRISQILDFPLRLNTDLEP---------------------------------EQREKQIIETLRQVGLLPDHASYYP-- 147 (267)
T ss_pred chhHHHHHHHHHHhccCCCH---------------------------------HHHHHHHHHHHHHcCCChHHHhcCc--
Confidence 88999999886543210000 00112356789999994 4555443
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
..|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++++.. +++|+.++|+.+++..++|++++|
T Consensus 148 ---~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tviivsH~~~~~~~~~d~i~~l 223 (267)
T PRK15112 148 ---HMLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQ-GISYIYVTQHLGMMKHISDQVLVM 223 (267)
T ss_pred ---hhcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHc-CcEEEEEeCCHHHHHHhcCEEEEE
Confidence 4799999999999999999999999999999999999999999999986533 445555788888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999987764
No 398
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.3e-33 Score=311.96 Aligned_cols=200 Identities=26% Similarity=0.398 Sum_probs=160.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCC--CCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHI--GEMT 242 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 242 (1444)
.++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++. ..++.++|++|++.+. +.+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHH--HHHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999999987 999999998764 2346799999997653 3489
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+||+.++...... .+.. + . .+....++.+++.+||++..++.+ .
T Consensus 87 v~e~l~~~~~~~~~--~~~~--------------~--~------------~~~~~~~~~~l~~~~l~~~~~~~~-----~ 131 (213)
T cd03235 87 VRDVVLMGLYGHKG--LFRR--------------L--S------------KADKAKVDEALERVGLSELADRQI-----G 131 (213)
T ss_pred HHHHHHhccccccc--cccC--------------C--C------------HHHHHHHHHHHHHcCCHHHHhCCc-----c
Confidence 99999885431100 0000 0 0 001123567889999987666554 4
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ . +++|+.++|+.+++.+++|++++|++|
T Consensus 132 ~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~~l~~~- 208 (213)
T cd03235 132 ELSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-E-GMTILVVTHDLGLVLEYFDRVLLLNRT- 208 (213)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-c-CCEEEEEeCCHHHHHHhcCEEEEEcCc-
Confidence 6999999999999999999999999999999999999999999999865 3 445666788888999999999999886
Q ss_pred EEEec
Q 000524 403 IVYQG 407 (1444)
Q Consensus 403 iv~~G 407 (1444)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66654
No 399
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=7.8e-33 Score=309.58 Aligned_cols=192 Identities=25% Similarity=0.347 Sum_probs=159.8
Q ss_pred CceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEEecCCCCCCCCcH
Q 000524 870 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTV 949 (1444)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv 949 (1444)
+.+.+|+|+|++|++||+++|+||||||||||+++|+|... +.+|+|.++|.+... ..+...+.+.+||
T Consensus 33 ~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~tv 101 (224)
T cd03220 33 GEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPELTG 101 (224)
T ss_pred CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCCcH
Confidence 45679999999999999999999999999999999999765 358999999976421 1112234567999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000524 950 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1444)
Q Consensus 950 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgL 1029 (1444)
+||+.+....+. ...+..++.++++++.++|.+..++.+ ..||||||||++|||+|+.+|++|+|||||+||
T Consensus 102 ~enl~~~~~~~~---~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~gL 173 (224)
T cd03220 102 RENIYLNGRLLG---LSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAVG 173 (224)
T ss_pred HHHHHHHHHHcC---CCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccC
Confidence 999987654321 223344456788999999988777764 579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1030 D~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
|+.++..+.+.|++++++|+|||+++|++. ++.+.+|++++|++ |++++.|
T Consensus 174 D~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 174 DAAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 999999999999998777899999999986 57778999999985 7887765
No 400
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=5.5e-33 Score=306.62 Aligned_cols=199 Identities=22% Similarity=0.289 Sum_probs=164.9
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++++|+++.++ .+.+|+|+|+.+++||++||+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 2 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~v~~~g~~~~ 66 (204)
T PRK13538 2 LEARNLACERD-------------ERILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARP--DAGEVLWQGEPIR 66 (204)
T ss_pred eEEEEEEEEEC-------------CEEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEEcc
Confidence 45677777653 24699999999999999999999999999999999998653 4799999998754
Q ss_pred c--ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHH
Q 000524 927 Q--ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQR 1004 (1444)
Q Consensus 927 ~--~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqr 1004 (1444)
. ..+++.++|++|++.+++.+|+.|++.+....+. . ..++.++++++.+||.+..++. +..||||||
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~tv~e~l~~~~~~~~---~---~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~ 135 (204)
T PRK13538 67 RQRDEYHQDLLYLGHQPGIKTELTALENLRFYQRLHG---P---GDDEALWEALAQVGLAGFEDVP-----VRQLSAGQQ 135 (204)
T ss_pred cchHHhhhheEEeCCccccCcCCcHHHHHHHHHHhcC---c---cHHHHHHHHHHHcCCHHHhhCC-----hhhcCHHHH
Confidence 3 2345678999999988899999999987654321 1 1234578999999998777765 357999999
Q ss_pred HHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEE
Q 000524 1005 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1072 (1444)
Q Consensus 1005 kRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll 1072 (1444)
||++||++|+++|++|+|||||+|||+.+...+++.|+++.++|+|||+++|++. ++-+.-+|++.+
T Consensus 136 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~-~i~~~~~~~~~~ 202 (204)
T PRK13538 136 RRVALARLWLTRAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDL-PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChh-hhccCCceEEec
Confidence 9999999999999999999999999999999999999998777899999999986 344443565554
No 401
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-33 Score=321.40 Aligned_cols=207 Identities=25% Similarity=0.340 Sum_probs=168.4
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC---ccceEEEEcCCCC-CCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV---PERTAAYISQHDN-HIGEM 241 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~l 241 (1444)
++|+|+|+.|++|++++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++. .++..
T Consensus 21 ~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~~ 100 (282)
T PRK13640 21 PALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVGA 100 (282)
T ss_pred cceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhccC
Confidence 4899999999999999999999999999999999999886112399999999886432 2357999999974 67789
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
||+||+.|..+..+.. . .+...+++.+++.+||++..++.+
T Consensus 101 tv~enl~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~L~~~~~~~~----- 141 (282)
T PRK13640 101 TVGDDVAFGLENRAVP-R---------------------------------PEMIKIVRDVLADVGMLDYIDSEP----- 141 (282)
T ss_pred CHHHHHHhhHHhCCCC-H---------------------------------HHHHHHHHHHHHHCCChhHhcCCc-----
Confidence 9999998864322110 0 011224567889999987666544
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.| |+.++|..+++ ..+|++++|++|
T Consensus 142 ~~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~t-vli~tH~~~~~-~~~d~i~~l~~G 219 (282)
T PRK13640 142 ANLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLT-VISITHDIDEA-NMADQVLVLDDG 219 (282)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEecCHHHH-HhCCEEEEEECC
Confidence 5799999999999999999999999999999999999999999999886533445 44466766676 579999999999
Q ss_pred eEEEecChhhHH
Q 000524 402 QIVYQGPRELVL 413 (1444)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1444)
++++.|+.+++.
T Consensus 220 ~i~~~g~~~~~~ 231 (282)
T PRK13640 220 KLLAQGSPVEIF 231 (282)
T ss_pred EEEEeCCHHHHh
Confidence 999999998774
No 402
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-33 Score=319.31 Aligned_cols=218 Identities=22% Similarity=0.379 Sum_probs=174.9
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|+++.++ +++.+|+|+|++|++||++||+||||||||||+++|+|...+ .+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRL--ASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEh
Confidence 478999988773 124699999999999999999999999999999999998653 589999999876
Q ss_pred CcccccceEEEEecCCCCC--CCCcHHHHHHHHHHhcCC-CCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 926 KQETFARISGYCEQNDIHS--PFVTVYESLLYSAWLRLP-PEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 926 ~~~~~~~~~gyv~q~~~~~--~~lTv~e~l~f~a~lr~~-~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
.....++.++|++|++.+. ...+++|++.+....+.. ........++.++++++.++|.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4332234689999997653 234788887653211000 01111223445788999999988777764 469999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEc
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G 1082 (1444)
||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999986 578899999777 4 8999999
Q ss_pred CCC
Q 000524 1083 PLG 1085 (1444)
Q Consensus 1083 ~~~ 1085 (1444)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 864
No 403
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-33 Score=316.88 Aligned_cols=203 Identities=24% Similarity=0.314 Sum_probs=167.4
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCC------C---CccceEEEEcCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGE------F---VPERTAAYISQHDN 236 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~------~---~~~~~~~yv~Q~d~ 236 (1444)
.+|+|+|+.+++||+++|+|||||||||||++|+|..+|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 5999999999999999999999999999999999999987 9999999987631 1 11357999999999
Q ss_pred CCCCCCHHHHHHHhh-hhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccc
Q 000524 237 HIGEMTVRETLAFSA-RCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTM 315 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1444)
+++.+||+||+.+.. ...+... .+....++.+++.+||++..+..
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLSK----------------------------------DQALARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCChhhhhCC
Confidence 999999999997532 1111000 00112356788999998766655
Q ss_pred ccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeE
Q 000524 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1444)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1444)
+ +.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|+++.. .+ ++++.++|+..++.+++|++
T Consensus 139 ~-----~~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tii~~sh~~~~~~~~~d~i 211 (242)
T PRK11124 139 P-----LHLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-TG-ITQVIVTHEVEVARKTASRV 211 (242)
T ss_pred h-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhcCEE
Confidence 4 47999999999999999999999999999999999999999999998753 34 45555778888888999999
Q ss_pred EEEcCCeEEEecChhhH
Q 000524 396 ILLSDGQIVYQGPRELV 412 (1444)
Q Consensus 396 ilL~~G~iv~~G~~~~~ 412 (1444)
++|++|+++++|+.+++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999987754
No 404
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=4.6e-33 Score=306.42 Aligned_cols=195 Identities=26% Similarity=0.320 Sum_probs=165.7
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
+++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (201)
T cd03231 2 EADELTCERD-------------GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDF 66 (201)
T ss_pred EEEEEEEEeC-------------CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEeccc
Confidence 4667776653 24699999999999999999999999999999999998653 47999999987532
Q ss_pred --ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000524 928 --ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 1005 (1444)
Q Consensus 928 --~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1005 (1444)
..+++.++|++|++.+++.+|++|++.+.... . .++.++++++.+++.+..++. +..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~-----~----~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~q 132 (201)
T cd03231 67 QRDSIARGLLYLGHAPGIKTTLSVLENLRFWHAD-----H----SDEQVEEALARVGLNGFEDRP-----VAQLSAGQQR 132 (201)
T ss_pred ccHHhhhheEEeccccccCCCcCHHHHHHhhccc-----c----cHHHHHHHHHHcCChhhhcCc-----hhhCCHHHHH
Confidence 23456789999998888899999999874311 1 134578899999998877665 3579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEE
Q 000524 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLM 1072 (1444)
Q Consensus 1006 Rl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll 1072 (1444)
|++||++|+.+|++|+|||||+|||+.+...+++.|+++.++|+|+|+++|++. ++...+|+++++
T Consensus 133 rl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 133 RVALARLLLSGRPLWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999999999999999999999999999999999998777999999999986 677889999877
No 405
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3.3e-33 Score=356.95 Aligned_cols=213 Identities=22% Similarity=0.321 Sum_probs=179.5
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++++|++|+++. +.+.+|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 340 ~~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~ 406 (582)
T PRK11176 340 GDIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHD 406 (582)
T ss_pred CeEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEE
Confidence 46999999999852 124699999999999999999999999999999999998764 47999999998
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 994 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1444)
.++ ..+++.++||+|++.+++ -|++||+.++. +.+.+ ++.++++++.+++.+. .|+.+|..
T Consensus 407 i~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~----~~~~~----~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~ 477 (582)
T PRK11176 407 LRDYTLASLRNQVALVSQNVHLFN-DTIANNIAYAR----TEQYS----REQIEEAARMAYAMDFINKMDNGLDTVIGEN 477 (582)
T ss_pred hhhcCHHHHHhhceEEccCceeec-chHHHHHhcCC----CCCCC----HHHHHHHHHHhCcHHHHHhcccccCceeCCC
Confidence 654 346788999999998886 69999997641 21222 2347778888776543 46777764
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
...||||||||++|||+|+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ..+.||+|++|++
T Consensus 478 -g~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~ 553 (582)
T PRK11176 478 -GVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED 553 (582)
T ss_pred -CCcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC
Confidence 36799999999999999999999999999999999999999999999874 4799999999984 6788999999985
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 554 -g~i~e~g~~ 562 (582)
T PRK11176 554 -GEIVERGTH 562 (582)
T ss_pred -CEEEEeCCH
Confidence 899999984
No 406
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-33 Score=320.11 Aligned_cols=209 Identities=23% Similarity=0.372 Sum_probs=171.3
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++..++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 45999999999999999999999999999999999999987 9999999998765332 35699999999888899
Q ss_pred CHHHHHHHhhhhc-CCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 242 TVRETLAFSARCQ-GVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 242 TV~E~l~f~~~~~-~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
||+||+.++..-. ..... . . ......++.+++.+||++..++.+
T Consensus 97 tv~~~~~~~~~~~~~~~~~----------------~--~-------------~~~~~~~~~~l~~~~l~~~~~~~~---- 141 (265)
T PRK10253 97 TVQELVARGRYPHQPLFTR----------------W--R-------------KEDEEAVTKAMQATGITHLADQSV---- 141 (265)
T ss_pred cHHHHHHhCcccccccccC----------------C--C-------------HHHHHHHHHHHHHcCCHHHhcCCc----
Confidence 9999998752100 00000 0 0 001123567889999987666544
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
+.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++.. +++|+.++|+..++.+++|+|++|++
T Consensus 142 -~~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~-~~tiii~tH~~~~~~~~~d~i~~l~~ 219 (265)
T PRK10253 142 -DTLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREK-GYTLAAVLHDLNQACRYASHLIALRE 219 (265)
T ss_pred -ccCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 5799999999999999999999999999999999999999999999986533 44555577888899999999999999
Q ss_pred CeEEEecChhhHH
Q 000524 401 GQIVYQGPRELVL 413 (1444)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1444)
|++++.|+.+++.
T Consensus 220 G~i~~~g~~~~~~ 232 (265)
T PRK10253 220 GKIVAQGAPKEIV 232 (265)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988764
No 407
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=3.8e-33 Score=320.08 Aligned_cols=216 Identities=23% Similarity=0.317 Sum_probs=171.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC--------ccceEEEEcCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV--------PERTAAYISQHDN 236 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~--------~~~~~~yv~Q~d~ 236 (1444)
+++|+|+|+.+++||+++|+||||||||||+++|+|.++|+...+|+|.++|.++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 45999999999999999999999999999999999999875223699999998875321 1356899999998
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1444)
+++.+||+||+.+...... . ..... ... . ..+.+..++.+++.+||++..|..+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~--~-------~~~~~--~~~-~--------------~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGST--P-------FWRTC--FSW-F--------------TREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhcccc--c-------chhhh--ccc-c--------------cHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 9999999999987642100 0 00000 000 0 0011234677899999987776654
Q ss_pred cCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEE
Q 000524 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1444)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1444)
..|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++.. +++|+.++|+.+++.+.+|+|+
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-g~tvii~tH~~~~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQND-GITVVVTLHQVDYALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEEE
Confidence 4699999999999999999999999999999999999999999999987533 4555657788888999999999
Q ss_pred EEcCCeEEEecChhhH
Q 000524 397 LLSDGQIVYQGPRELV 412 (1444)
Q Consensus 397 lL~~G~iv~~G~~~~~ 412 (1444)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999998764
No 408
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-32 Score=317.49 Aligned_cols=205 Identities=21% Similarity=0.288 Sum_probs=168.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC---ccceEEEEcCCCC-CCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV---PERTAAYISQHDN-HIGE 240 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 240 (1444)
..+|+|+|+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999987 999999999876432 2467999999974 6778
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
.||.||+.++.+..+.. + .+....++.+++.+||.+..++.+
T Consensus 97 ~tv~eni~~~~~~~~~~-~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~---- 138 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP-R---------------------------------EEMIKRVDEALLAVNMLDFKTREP---- 138 (277)
T ss_pred CCHHHHHHhhHHHcCCC-H---------------------------------HHHHHHHHHHHHHCCCHhHhhCCc----
Confidence 89999998764321110 0 001123567888999987666544
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|++++...+.| |+.++|..+++. .+|+|++|++
T Consensus 139 -~~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~t-iil~sH~~~~~~-~~d~i~~l~~ 215 (277)
T PRK13642 139 -ARLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLT-VLSITHDLDEAA-SSDRILVMKA 215 (277)
T ss_pred -ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCE-EEEEeCCHHHHH-hCCEEEEEEC
Confidence 4799999999999999999999999999999999999999999999886533444 555777777775 6999999999
Q ss_pred CeEEEecChhhHH
Q 000524 401 GQIVYQGPRELVL 413 (1444)
Q Consensus 401 G~iv~~G~~~~~~ 413 (1444)
|+++..|+.+++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988764
No 409
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.7e-33 Score=319.58 Aligned_cols=210 Identities=20% Similarity=0.293 Sum_probs=174.1
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|+++.++. +...+|+|||+.|++||+++|+|+||||||||+++|+|... .+|+|.++|.++
T Consensus 2 ~i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i 67 (275)
T cd03289 2 QMTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSW 67 (275)
T ss_pred eEEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEh
Confidence 3789999888742 12358999999999999999999999999999999999864 369999999876
Q ss_pred Cc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccC------CCC
Q 000524 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGL------PGV 996 (1444)
Q Consensus 926 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~------~~~ 996 (1444)
.. ...++.++|++|++.+++ .|++||+.... ... ++.++++++.+||.+..+..++. ++.
T Consensus 68 ~~~~~~~lr~~i~~v~q~~~lf~-~tv~~nl~~~~------~~~----~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g 136 (275)
T cd03289 68 NSVPLQKWRKAFGVIPQKVFIFS-GTFRKNLDPYG------KWS----DEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGG 136 (275)
T ss_pred hhCCHHHHhhhEEEECCCcccch-hhHHHHhhhcc------CCC----HHHHHHHHHHcCCHHHHHhCcccccceecCCC
Confidence 43 234667999999999887 59999995321 111 23478889999998766665431 234
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
..||||||||++|||||+.+|+||+|||||+|||+.+...+++.|++.. .++|||+++|++. .+ ..+|++++|++ |
T Consensus 137 ~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i-~~~dri~vl~~-G 212 (275)
T cd03289 137 CVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE-AM-LECQRFLVIEE-N 212 (275)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH-HH-HhCCEEEEecC-C
Confidence 6799999999999999999999999999999999999999999999874 4899999999984 34 45999999985 7
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
+++++|++
T Consensus 213 ~i~~~g~~ 220 (275)
T cd03289 213 KVRQYDSI 220 (275)
T ss_pred eEeecCCH
Confidence 99999986
No 410
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-33 Score=312.83 Aligned_cols=201 Identities=23% Similarity=0.382 Sum_probs=168.1
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCHHHHHH
Q 000524 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTVRETLA 248 (1444)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 248 (1444)
|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999987 9999999998765432 357999999999999999999998
Q ss_pred HhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccchhh
Q 000524 249 FSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGE 328 (1444)
Q Consensus 249 f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGq 328 (1444)
+..... .... . .....++.+++.+||++..++.+. .|||||
T Consensus 94 ~~~~~~-~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 134 (232)
T PRK10771 94 LGLNPG-LKLN-----A----------------------------AQREKLHAIARQMGIEDLLARLPG-----QLSGGQ 134 (232)
T ss_pred cccccc-cCCC-----H----------------------------HHHHHHHHHHHHcCcHHHHhCCcc-----cCCHHH
Confidence 753210 0000 0 011235678899999877776554 699999
Q ss_pred hhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEEEecC
Q 000524 329 RKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVYQGP 408 (1444)
Q Consensus 329 rqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~~G~ 408 (1444)
||||+||++++.+|++++|||||+|||..++..+.+.|+++.+..+. +|+.++|+..++.+.+|+|++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~-tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQL-TLLMVSHSLEDAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCC-EEEEEECCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999988653344 45557788888899999999999999999999
Q ss_pred hhhHH
Q 000524 409 RELVL 413 (1444)
Q Consensus 409 ~~~~~ 413 (1444)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 88764
No 411
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.2e-34 Score=321.31 Aligned_cols=209 Identities=26% Similarity=0.412 Sum_probs=172.6
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCC---CccceEEEEcCCCCCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF---VPERTAAYISQHDNHIGE 240 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~---~~~~~~~yv~Q~d~~~~~ 240 (1444)
.+++|+||||++.||+.+|++||||+||||+|++|....+.+ +|.|+++|+++... ..|+.+|.||||..+|.
T Consensus 550 ~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFN- 625 (790)
T KOG0056|consen 550 GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFN- 625 (790)
T ss_pred CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCcceeec-
Confidence 357999999999999999999999999999999999999887 99999999998654 34678999999887776
Q ss_pred CCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcc
Q 000524 241 MTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEM 320 (1444)
Q Consensus 241 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~ 320 (1444)
.|+..||.|+.. + ..|.+.+..|.+. + + --++++.++.++|+||+++
T Consensus 626 dTI~yNIryak~----~--------------------AsneevyaAAkAA--~----I---HdrIl~fPegY~t~VGERG 672 (790)
T KOG0056|consen 626 DTILYNIRYAKP----S--------------------ASNEEVYAAAKAA--Q----I---HDRILQFPEGYNTRVGERG 672 (790)
T ss_pred ceeeeheeecCC----C--------------------CChHHHHHHHHHh--h----H---HHHHhcCchhhhhhhhhcc
Confidence 599999988631 1 1121222221111 1 1 1257889999999999998
Q ss_pred ccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC
Q 000524 321 IRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD 400 (1444)
Q Consensus 321 ~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~ 400 (1444)
.+ |||||||||+|||+++..|.+++|||.||+||..+.+.|..+|.+++. ++|+|+..|. -.+.-.+|.|+++++
T Consensus 673 Lk-LSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvAHR--LSTivnAD~ILvi~~ 747 (790)
T KOG0056|consen 673 LK-LSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVAHR--LSTIVNADLILVISN 747 (790)
T ss_pred cc-cCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEeee--ehheecccEEEEEeC
Confidence 86 999999999999999999999999999999999999999999999884 5677765543 335567899999999
Q ss_pred CeEEEecChhhHHH
Q 000524 401 GQIVYQGPRELVLE 414 (1444)
Q Consensus 401 G~iv~~G~~~~~~~ 414 (1444)
|+|++.|.++|++.
T Consensus 748 G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 748 GRIVERGRHEELLK 761 (790)
T ss_pred CeEeecCcHHHHHh
Confidence 99999999999875
No 412
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=5.8e-33 Score=315.37 Aligned_cols=213 Identities=25% Similarity=0.319 Sum_probs=168.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCeecEEEECCccCCCCCc----cceEEEEcCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKL--DSSLKVSGRVTYNGHDMGEFVP----ERTAAYISQHDNHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l--~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 238 (1444)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.+ +|+ +|+|.++|+++..... +..++|++|++.++
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 45999999999999999999999999999999999995 566 9999999998765432 23489999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcc-ccccccc
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV-CADTMVG 317 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-~~dt~vg 317 (1444)
+.+|++|++.+......... .+. ..+ ..+....++.+++.+||+. ..++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~----------~~~------~~~-----------~~~~~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSAR----------GEE------PLD-----------LLDFLKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhccc----------ccc------ccc-----------HHHHHHHHHHHHHHcCCchhhcccccc
Confidence 99999999988643211000 000 000 0011234677899999973 4554443
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhh-cCeEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDL-FDDII 396 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~-fD~vi 396 (1444)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. .+ ++|+.++|+.+++... +|+++
T Consensus 143 ----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tvi~vsH~~~~~~~~~~d~i~ 216 (243)
T TIGR01978 143 ----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PD-RSFLIITHYQRLLNYIKPDYVH 216 (243)
T ss_pred ----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CC-cEEEEEEecHHHHHhhcCCeEE
Confidence 14999999999999999999999999999999999999999999998854 34 4555577778888887 89999
Q ss_pred EEcCCeEEEecChhhHH
Q 000524 397 LLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1444)
+|++|++++.|+.+++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999987553
No 413
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-33 Score=324.03 Aligned_cols=206 Identities=19% Similarity=0.296 Sum_probs=166.3
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCC----C----CccceEEEEcCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGE----F----VPERTAAYISQHDN 236 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~----~----~~~~~~~yv~Q~d~ 236 (1444)
..+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 24 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~ 100 (289)
T PRK13645 24 FKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPE 100 (289)
T ss_pred cceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcc
Confidence 35899999999999999999999999999999999999987 9999999988642 1 12457999999863
Q ss_pred -CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc-ccccc
Q 000524 237 -HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADT 314 (1444)
Q Consensus 237 -~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1444)
.+...||+||+.|+....+... .+....++.+++.+||+ +..++
T Consensus 101 ~~~~~~tv~enl~~~~~~~~~~~----------------------------------~~~~~~~~~ll~~~~L~~~~~~~ 146 (289)
T PRK13645 101 YQLFQETIEKDIAFGPVNLGENK----------------------------------QEAYKKVPELLKLVQLPEDYVKR 146 (289)
T ss_pred hhhhhhHHHHHHHHHHHHcCCCH----------------------------------HHHHHHHHHHHHHcCCChhHhcC
Confidence 2334699999988643221100 00112346678889994 45554
Q ss_pred cccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCe
Q 000524 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1444)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1444)
.+ +.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+.. +++|+.++|..+++.+++|+
T Consensus 147 ~~-----~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tiiiisH~~~~~~~~~d~ 220 (289)
T PRK13645 147 SP-----FELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEY-KKRIIMVTHNMDQVLRIADE 220 (289)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEecCHHHHHHhCCE
Confidence 43 4799999999999999999999999999999999999999999999886533 44555578888889999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 000524 395 IILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1444)
|++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 221 VIVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999988764
No 414
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=7.3e-33 Score=346.74 Aligned_cols=220 Identities=23% Similarity=0.340 Sum_probs=181.2
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++++|+++.++ ++.+|+|||+++++||++||+||||||||||+++|+|...+++.+|+|.++|.++.
T Consensus 2 l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~ 68 (500)
T TIGR02633 2 LEMKGIVKTFG-------------GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLK 68 (500)
T ss_pred EEEEeEEEEeC-------------CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECC
Confidence 56778887763 24699999999999999999999999999999999997653224899999998764
Q ss_pred ccc----ccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHcCCcccc-cccccCCCCCcCC
Q 000524 927 QET----FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP-EVDSETRKMFIEEVMELVELKPLI-QSLVGLPGVSGLS 1000 (1444)
Q Consensus 927 ~~~----~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~-~~~~~~~~~~v~~~l~~l~L~~~~-~~~vg~~~~~~lS 1000 (1444)
... .++.+||++|++.+++.+||.|++.+....+... ....+..++.++++++.++|.+.. +.. +..||
T Consensus 69 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS 143 (500)
T TIGR02633 69 ASNIRDTERAGIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYG 143 (500)
T ss_pred CCCHHHHHhCCEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCC
Confidence 321 2356899999998889999999998764332111 122333445688999999998654 343 35799
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEE
Q 000524 1001 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIY 1080 (1444)
Q Consensus 1001 gGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y 1080 (1444)
|||||||+||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.||++++|++ |++++
T Consensus 144 gG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~ 221 (500)
T TIGR02633 144 GGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVA 221 (500)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEee
Confidence 99999999999999999999999999999999999999999999888999999999986 57788999999986 78999
Q ss_pred EcCCCc
Q 000524 1081 VGPLGR 1086 (1444)
Q Consensus 1081 ~G~~~~ 1086 (1444)
.|+...
T Consensus 222 ~~~~~~ 227 (500)
T TIGR02633 222 TKDMST 227 (500)
T ss_pred ecCccc
Confidence 988753
No 415
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-33 Score=316.55 Aligned_cols=210 Identities=22% Similarity=0.318 Sum_probs=164.7
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCeecEEEECCccCCCC--C---ccceEEEEcCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF--V---PERTAAYISQHDNHI 238 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~--~---~~~~~~yv~Q~d~~~ 238 (1444)
.+|+|+|+.+++|++++|+|||||||||||++|+|..+ |....+|+|.++|+++... . .++.++|++|++.++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 58999999999999999999999999999999999864 1001389999999887532 1 145799999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+ .||+||+.++....+.... ......++.+++.+||.+...+.. +
T Consensus 100 ~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14242 100 P-KSIFENVAYGLRVNGVKDK---------------------------------AYLAERVERSLRHAALWDEVKDRL-H 144 (253)
T ss_pred c-CcHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 7 5999999987543221000 001123456677888754221222 2
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
..++.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.+++|+|++|
T Consensus 145 ~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tvii~tH~~~~~~~~~d~v~~l 221 (253)
T PRK14242 145 ESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELK--AR-YTIIIVTHNMQQAARVSDVTAFF 221 (253)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CeEEEEEecHHHHHHhCCEEEEE
Confidence 3456799999999999999999999999999999999999999999999874 24 45555778888899999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|++++.|+.+++.
T Consensus 222 ~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 222 YMGKLIEVGPTEQIF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987663
No 416
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=7.7e-33 Score=312.65 Aligned_cols=206 Identities=27% Similarity=0.408 Sum_probs=171.0
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-cceEEEEcCCCCCCCCCCH
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-ERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 243 (1444)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 35999999999999999999999999999999999999987 9999999998765433 3579999999988989999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
+||+.+..+..+... ......++++++.++|....++.+ +.
T Consensus 90 ~enl~~~~~~~~~~~----------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 130 (237)
T TIGR00968 90 RDNIAFGLEIRKHPK----------------------------------AKIKARVEELLELVQLEGLGDRYP-----NQ 130 (237)
T ss_pred HHHHHhHHHhcCCCH----------------------------------HHHHHHHHHHHHHcCCHhHhhCCh-----hh
Confidence 999988654321100 000123466788899976666544 46
Q ss_pred cchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeE
Q 000524 324 ISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQI 403 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~i 403 (1444)
||||||||++||++|+.+|++++|||||+|||..+...+.+.|++++...++|+|+ ++|...++.+++|+|++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli-~sH~~~~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 131 LSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVF-VTHDQEEAMEVADRIVVMSNGKI 209 (237)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEE-EeCCHHHHHhhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999876532445444 66777888999999999999999
Q ss_pred EEecChhhHH
Q 000524 404 VYQGPRELVL 413 (1444)
Q Consensus 404 v~~G~~~~~~ 413 (1444)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (237)
T TIGR00968 210 EQIGSPDEVY 219 (237)
T ss_pred EEecCHHHHH
Confidence 9999988764
No 417
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.2e-33 Score=354.68 Aligned_cols=212 Identities=28% Similarity=0.425 Sum_probs=179.8
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++|+|+++.++. +++.+|+|+|++++|||++||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p--~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDP--QQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 46999999999852 123599999999999999999999999999999999998653 48999999998
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccc------cccccCCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLI------QSLVGLPG 995 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~------~~~vg~~~ 995 (1444)
+.+ ..+++.++||+|++.+++ .|++||+.++. + +. .++.++++++.+++.+.. ||.+|..
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~----~-~~----~~~~i~~al~~~~l~~~i~~p~GldT~vge~- 472 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAA----P-NA----SDEALIEVLQQVGLEKLLEDDKGLNAWLGEG- 472 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCC----C-cc----CHHHHHHHHHHcCCHHHHcCccccCchhcCC-
Confidence 654 346778999999998876 59999997752 1 11 233478899999987653 5666654
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecC
Q 000524 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1075 (1444)
Q Consensus 996 ~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~g 1075 (1444)
...||||||||++|||+|+++|+||+||||||+||+.++..+++.|+++. +++|+|+++|+++ ....+|++++|++
T Consensus 473 g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~- 548 (574)
T PRK11160 473 GRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN- 548 (574)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-
Confidence 46799999999999999999999999999999999999999999999985 5899999999986 4567999999986
Q ss_pred cEEEEEcCC
Q 000524 1076 GQEIYVGPL 1084 (1444)
Q Consensus 1076 g~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 549 G~i~~~g~~ 557 (574)
T PRK11160 549 GQIIEQGTH 557 (574)
T ss_pred CeEEEeCCH
Confidence 899999874
No 418
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.3e-33 Score=358.32 Aligned_cols=209 Identities=22% Similarity=0.381 Sum_probs=167.2
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
+++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 45999999999999999999999999999999999999998 9999999999887654 478999999987776 6
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
|++|||.++..-. .+.++..+++...+ .++.++ .|++..||.+|+.+
T Consensus 432 Ti~~Ni~~~~~~~------------------------~~~~~i~~al~~~~------l~~~i~--~lp~Gldt~ig~~g- 478 (582)
T PRK11176 432 TIANNIAYARTEQ------------------------YSREQIEEAARMAY------AMDFIN--KMDNGLDTVIGENG- 478 (582)
T ss_pred hHHHHHhcCCCCC------------------------CCHHHHHHHHHHhC------cHHHHH--hcccccCceeCCCC-
Confidence 9999998753100 01111111111100 112222 26777899999865
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
+.||||||||++|||||+++|++++||||||+||+.++..+.+.|+++. .++|+|+ ++|.. +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~~~tvI~-VtHr~-~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ--KNRTSLV-IAHRL-STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEE-Eecch-HHHHhCCEEEEEECC
Confidence 5799999999999999999999999999999999999999999998863 3456555 45544 567789999999999
Q ss_pred eEEEecChhhHHH
Q 000524 402 QIVYQGPRELVLE 414 (1444)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1444)
+++++|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999998864
No 419
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.5e-32 Score=313.52 Aligned_cols=220 Identities=24% Similarity=0.296 Sum_probs=175.4
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|+++.++ ++.+|+|||+++++||++||+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 378899987763 2359999999999999999999999999999999999621124589999999876
Q ss_pred Ccc---cccc-eEEEEecCCCCCCCCcHHHHHHHHHHhcCC----CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCC
Q 000524 926 KQE---TFAR-ISGYCEQNDIHSPFVTVYESLLYSAWLRLP----PEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGV 996 (1444)
Q Consensus 926 ~~~---~~~~-~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~----~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~ 996 (1444)
... ..++ .++|++|++.+++.+|+.|++.+....... .+....+..+.+.++++.+++. ...+..++
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 431 1222 478999999999999999998765432110 1112222335678899999997 34554431
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHh-cceEEEEecC
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDA-FDELFLMKRG 1075 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~-fD~v~ll~~g 1075 (1444)
..||||||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||+++|+++ .+... +|++++|++
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~-~~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQR-LLDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHhhhCCEEEEEeC-
Confidence 259999999999999999999999999999999999999999999999877999999999986 35454 899999985
Q ss_pred cEEEEEcCC
Q 000524 1076 GQEIYVGPL 1084 (1444)
Q Consensus 1076 g~~~y~G~~ 1084 (1444)
|++++.|+.
T Consensus 228 G~i~~~~~~ 236 (252)
T CHL00131 228 GKIIKTGDA 236 (252)
T ss_pred CEEEEecCh
Confidence 899999976
No 420
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=1e-32 Score=317.00 Aligned_cols=224 Identities=25% Similarity=0.328 Sum_probs=178.8
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+.... ..+. ..++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.++.
T Consensus 4 l~~~nl~~~~~~~~---~~~~-~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~ 77 (268)
T PRK10419 4 LNVSGLSHHYAHGG---LSGK-HQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLA 77 (268)
T ss_pred EEEeceEEEecCCc---cccc-cCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecc
Confidence 67888887764100 0000 013569999999999999999999999999999999999765 35899999998754
Q ss_pred cc------cccceEEEEecCC--CCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000524 927 QE------TFARISGYCEQND--IHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 997 (1444)
Q Consensus 927 ~~------~~~~~~gyv~q~~--~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1444)
.. ..++.++|++|+. .+.+..|+.|++.+..... ...........++++++.+++. ...++. ..
T Consensus 78 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~ 150 (268)
T PRK10419 78 KLNRAQRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHL--LSLDKAERLARASEMLRAVDLDDSVLDKR-----PP 150 (268)
T ss_pred ccChhHHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhh--ccCCHHHHHHHHHHHHHHcCCChhHhhCC-----Cc
Confidence 31 2356799999997 3567789999987643211 1123344455689999999996 455554 45
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|++. ++.+.+|++++|++ |
T Consensus 151 ~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G 228 (268)
T PRK10419 151 QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-G 228 (268)
T ss_pred cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999998765 899999999986 57788999999985 7
Q ss_pred EEEEEcCCC
Q 000524 1077 QEIYVGPLG 1085 (1444)
Q Consensus 1077 ~~~y~G~~~ 1085 (1444)
++++.|+..
T Consensus 229 ~i~~~g~~~ 237 (268)
T PRK10419 229 QIVETQPVG 237 (268)
T ss_pred EEeeeCChh
Confidence 999999864
No 421
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-33 Score=317.72 Aligned_cols=219 Identities=21% Similarity=0.224 Sum_probs=174.0
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCC--C-ceEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g 922 (1444)
-+.++|+++.++ .+.+|+|+|++|++||++||+|+||||||||+++|+|... + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 488999988774 1358999999999999999999999999999999999753 1 13589999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
.+... ..+++.++|++|++.+++ .|++||+.+....+. ..+.+..+..+.++++.+++......... ..+.
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~-~~~~ 166 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHG--IKDKKTLDEIVEKSLRGAAIWDELKDRLH-DNAY 166 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHcCCcchHHHHHh-cCcc
Confidence 87632 234567999999988877 599999988654321 11222234456777877765321111111 1246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |+
T Consensus 167 ~LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~~-G~ 243 (271)
T PRK14238 167 GLSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFLN-GY 243 (271)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CE
Confidence 8999999999999999999999999999999999999999999999865 799999999986 57788999999986 79
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
+++.|+.
T Consensus 244 i~~~g~~ 250 (271)
T PRK14238 244 VNEYDDT 250 (271)
T ss_pred EEEeCCH
Confidence 9999875
No 422
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-32 Score=316.80 Aligned_cols=219 Identities=18% Similarity=0.231 Sum_probs=175.1
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc---eEEEEEEEc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITIS 921 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~ 921 (1444)
.-+.++|+++.+. ++.+|+|+|+.+++||+++|+|+||||||||+++|+|..... +.+|+|.++
T Consensus 19 ~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 85 (274)
T PRK14265 19 SVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYR 85 (274)
T ss_pred ceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEEC
Confidence 3588999988763 246999999999999999999999999999999999975321 247999999
Q ss_pred CccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCC
Q 000524 922 GYPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGV 996 (1444)
Q Consensus 922 g~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~ 996 (1444)
|.++.. ..+++.++|++|+..+++. ||.|++.+....+. ... ..++.++++++.+++......... ..+
T Consensus 86 g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~l~~~~~-~~~ 159 (274)
T PRK14265 86 DRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANG---YKG-NLDELVEDSLRRAAIWEEVKDKLK-EKG 159 (274)
T ss_pred CEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcC---chH-HHHHHHHHHHHHcccchhhHHHhc-CCc
Confidence 987532 2345678999999887764 99999987643321 111 223446778888887432111111 124
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe---
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK--- 1073 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~--- 1073 (1444)
..||||||||++|||||+.+|++|+|||||+|||+.+...+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|+
T Consensus 160 ~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~~~ 237 (274)
T PRK14265 160 TALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFNTEI 237 (274)
T ss_pred ccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEeccc
Confidence 67999999999999999999999999999999999999999999999865 799999999996 6888999999997
Q ss_pred -----cCcEEEEEcCC
Q 000524 1074 -----RGGQEIYVGPL 1084 (1444)
Q Consensus 1074 -----~gg~~~y~G~~ 1084 (1444)
+.|++++.|+.
T Consensus 238 ~~~~~~~G~~~~~g~~ 253 (274)
T PRK14265 238 DEYGKRRGKLVEFSPT 253 (274)
T ss_pred ccccccCceEEEeCCH
Confidence 25899999986
No 423
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-33 Score=316.50 Aligned_cols=212 Identities=21% Similarity=0.315 Sum_probs=167.5
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCeecEEEECCccCC--CCC---ccceEEEEcCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMG--EFV---PERTAAYISQHDNHI 238 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~--~~~---~~~~~~yv~Q~d~~~ 238 (1444)
++|+|+|+.+++||+++|+||||||||||+++|+|.++|+ ...+|+|.++|+++. +.. .++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 5899999999999999999999999999999999998762 123899999999875 221 235799999999999
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+.+||.||+.++....+..... .+....++.+++.+||........ +
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKSK--------------------------------KELDERVEWALKKAALWDEVKDRL-N 144 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCCH--------------------------------HHHHHHHHHHHHHcCCccchhhhh-c
Confidence 9999999998865422110000 001123456778888743111111 2
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
...+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|..+++.+++|+|++|
T Consensus 145 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d~i~~l 221 (253)
T PRK14267 145 DYPSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--E-YTIVLVTHSPAQAARVSDYVAFL 221 (253)
T ss_pred cChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--C-CEEEEEECCHHHHHhhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 45555778888899999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|++++.|+.+++.
T Consensus 222 ~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 222 YLGKLIEVGPTRKVF 236 (253)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 424
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=8.1e-33 Score=346.15 Aligned_cols=211 Identities=21% Similarity=0.311 Sum_probs=180.6
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.+.++|+++.++ ++.+|+|+|+++++|+++||+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQYS-------------GVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPP--DSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEeC-------------CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 378899988774 24699999999999999999999999999999999998653 489999999876
Q ss_pred Ccc---c-ccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000524 926 KQE---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 926 ~~~---~-~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1001 (1444)
... . .++.+||++|++.+++.+||+|++.|... . ....++.++++++.++|.+..+..+ ..|||
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~--~-----~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 143 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLP--K-----RQASMQKMKQLLAALGCQLDLDSSA-----GSLEV 143 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccc--c-----chHHHHHHHHHHHHcCCCccccCCh-----hhCCH
Confidence 431 1 22458999999999999999999987531 1 1223456889999999988777664 57999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1081 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~ 1081 (1444)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. ++.+.||++++|++ |++++.
T Consensus 144 G~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (510)
T PRK15439 144 ADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALS 221 (510)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 9999999999999999999999999999999999999999999888999999999986 57788999999986 799999
Q ss_pred cCCC
Q 000524 1082 GPLG 1085 (1444)
Q Consensus 1082 G~~~ 1085 (1444)
|+..
T Consensus 222 g~~~ 225 (510)
T PRK15439 222 GKTA 225 (510)
T ss_pred cChH
Confidence 9864
No 425
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3e-33 Score=364.61 Aligned_cols=206 Identities=23% Similarity=0.320 Sum_probs=165.4
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
+++|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+|. .
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLFE-G 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhhh-c
Confidence 35899999999999999999999999999999999999998 9999999999887654 578999999987775 6
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
|++|||.++.. +.+.++..+++...+ .++.++ .++...||.+|+.+
T Consensus 568 Ti~eNi~l~~~-------------------------~~~~~~i~~al~~~~------l~~~i~--~lp~gl~t~i~e~G- 613 (710)
T TIGR03796 568 TVRDNLTLWDP-------------------------TIPDADLVRACKDAA------IHDVIT--SRPGGYDAELAEGG- 613 (710)
T ss_pred cHHHHhhCCCC-------------------------CCCHHHHHHHHHHhC------CHHHHH--hCcCcccceeccCC-
Confidence 99999987521 011111111111100 111222 36667899999765
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
.+||||||||++||||++++|++++||||||+||+.+...|.+.|++ .++|+|+ ++|.. ++...+|+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~Ii-itHrl-~~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCII-VAHRL-STIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEE-EecCH-HHHHhCCEEEEEeCC
Confidence 57999999999999999999999999999999999999999999975 3456666 55544 455679999999999
Q ss_pred eEEEecChhhHHH
Q 000524 402 QIVYQGPRELVLE 414 (1444)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1444)
+++++|+++++++
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999875
No 426
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-32 Score=317.68 Aligned_cols=213 Identities=22% Similarity=0.279 Sum_probs=174.3
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 922 (1444)
.+.++|+++.+. ++.+|+|+||.|++||+++|+|+||||||||+++|+|...+ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 488999988763 24699999999999999999999999999999999997542 13589999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc----cccccccC
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP----LIQSLVGL 993 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~----~~~~~vg~ 993 (1444)
.++.. ...++.++|++|+..+++. ||.|++.+....+. ... ..++.++++++.++|.+ ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~---~~~-~~~~~~~~~l~~~~l~~~i~~~~~~~--- 177 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQG---YDG-DIDERVEESLRRAALWDEVKDQLDSS--- 177 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcC---CcH-HHHHHHHHHHHHcCCCchhHHHHhCC---
Confidence 87532 2345679999999887775 99999987654432 112 23446889999999853 23332
Q ss_pred CCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEE-EE
Q 000524 994 PGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELF-LM 1072 (1444)
Q Consensus 994 ~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~-ll 1072 (1444)
+..||||||||++||++|+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|+++ +|
T Consensus 178 --~~~LSgGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l 253 (285)
T PRK14254 178 --GLDLSGGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFL 253 (285)
T ss_pred --cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEe
Confidence 467999999999999999999999999999999999999999999999976 489999999986 5778899975 56
Q ss_pred ecCcEEEEEcCC
Q 000524 1073 KRGGQEIYVGPL 1084 (1444)
Q Consensus 1073 ~~gg~~~y~G~~ 1084 (1444)
++ |+++..|+.
T Consensus 254 ~~-G~i~~~g~~ 264 (285)
T PRK14254 254 TG-GELVEFDDT 264 (285)
T ss_pred eC-CEEEEeCCH
Confidence 74 899998874
No 427
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-32 Score=314.85 Aligned_cols=210 Identities=18% Similarity=0.249 Sum_probs=164.8
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCeecEEEECCccCCCC--C---ccceEEEEcCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF--V---PERTAAYISQHDNHI 238 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~--~---~~~~~~yv~Q~d~~~ 238 (1444)
++|+|+|+.|++|++++|+||||||||||+++|+|.++ |....+|+|.++|+++... . .++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 58999999999999999999999999999999999986 2112389999999887421 1 246799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+ .||+||+.+..+....... .+....++.+++.+||........ +
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 151 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLSR---------------------------------AEMDERVEWALTKAALWNEVKDKL-H 151 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCCH---------------------------------HHHHHHHHHHHHHcCCChhhHHHH-h
Confidence 7 8999999886532210000 001123566788888742111111 2
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
.....||||||||++||++|+.+|++++|||||+|||..++..+.+.|+++. .+ ++|+.++|+..++.+++|++++|
T Consensus 152 ~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~--~~-~tiii~sH~~~~~~~~~d~i~~l 228 (260)
T PRK10744 152 QSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK--QD-YTVVIVTHNMQQAARCSDYTAFM 228 (260)
T ss_pred cCCCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCEEEEE
Confidence 3345799999999999999999999999999999999999999999999874 24 45566778888888999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|+++..|+.+++.
T Consensus 229 ~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 229 YLGELIEFGNTDTIF 243 (260)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 428
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=2.6e-33 Score=316.80 Aligned_cols=211 Identities=27% Similarity=0.420 Sum_probs=162.6
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
++++|+++.++. ..+.+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 1 i~~~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~--~~G~i~~~g~~~~ 67 (237)
T cd03252 1 ITFEHVRFRYKP-----------DGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVP--ENGRVLVDGHDLA 67 (237)
T ss_pred CEEEEEEEecCC-----------CCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCeehH
Confidence 356777776531 123599999999999999999999999999999999998653 4799999998753
Q ss_pred c---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc-c-----CCCCC
Q 000524 927 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLV-G-----LPGVS 997 (1444)
Q Consensus 927 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~v-g-----~~~~~ 997 (1444)
. ..+++.++|++|++.+++ .||.||+.+... ..... .+.+.++..++.+..+.+. | ...+.
T Consensus 68 ~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~-----~~~~~----~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~ 137 (237)
T cd03252 68 LADPAWLRRQVGVVLQENVLFN-RSIRDNIALADP-----GMSME----RVIEAAKLAGAHDFISELPEGYDTIVGEQGA 137 (237)
T ss_pred hcCHHHHhhcEEEEcCCchhcc-chHHHHhhccCC-----CCCHH----HHHHHHHHcCcHHHHHhCcccccchhhcCCC
Confidence 2 234567999999987764 699999976421 11111 1223333334333222110 0 11246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|++++ +|+|||+++|++. ++ +.+|++++|++ |+
T Consensus 138 ~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tiii~sH~~~-~~-~~~d~v~~l~~-G~ 213 (237)
T cd03252 138 GLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC-AGRTVIIIAHRLS-TV-KNADRIIVMEK-GR 213 (237)
T ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-HhCCEEEEEEC-CE
Confidence 899999999999999999999999999999999999999999999986 4899999999986 35 56999999985 79
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
+++.|+.
T Consensus 214 i~~~~~~ 220 (237)
T cd03252 214 IVEQGSH 220 (237)
T ss_pred EEEEcCH
Confidence 9999875
No 429
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-32 Score=314.75 Aligned_cols=211 Identities=20% Similarity=0.288 Sum_probs=167.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCeecEEEECCccCCCC-----CccceEEEEcCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1444)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|. ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 35899999999999999999999999999999999998641 12389999999987532 124579999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1444)
++ .||+||+.++.+..+.... .+....++.+++.+||.+..+...
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~i~~~~- 157 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKDK---------------------------------KVLDEIVETSLKQAALWDQVKDDL- 157 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCCchhhhhh-
Confidence 77 6999999986532211000 001123456788888864322222
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1444)
+...+.||||||||++|||+|+.+|++++|||||+|||+.+...+.+.|+++. .+ ++|+.++|..+++.+++|++++
T Consensus 158 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~ 234 (267)
T PRK14237 158 HKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK--KN-YTIIIVTHNMQQAARASDYTAF 234 (267)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh--cC-CEEEEEecCHHHHHHhcCEEEE
Confidence 34566899999999999999999999999999999999999999999999874 24 4556677888889999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000524 398 LSDGQIVYQGPRELVL 413 (1444)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1444)
|++|++++.|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 235 FYLGDLIEYDKTRNIF 250 (267)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988763
No 430
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=9.3e-33 Score=307.02 Aligned_cols=199 Identities=21% Similarity=0.318 Sum_probs=165.0
Q ss_pred EeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC-ccceEEEEcCCCCCCCCCCHHH
Q 000524 167 ILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-PERTAAYISQHDNHIGEMTVRE 245 (1444)
Q Consensus 167 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 245 (1444)
+++|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 357999999999999999999999999999999999987 999999999875432 2467999999999999999999
Q ss_pred HHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccc
Q 000524 246 TLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGIS 325 (1444)
Q Consensus 246 ~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LS 325 (1444)
|+.+...... ... .+....++++++.+||++..++.+ +.||
T Consensus 90 n~~~~~~~~~-~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KLN---------------------------------AEQQEKVVDAAQQVGIADYLDRLP-----EQLS 130 (213)
T ss_pred HHHhHhhccC-Ccc---------------------------------HHHHHHHHHHHHHcCcHHHhhCCc-----ccCC
Confidence 9987532100 000 001123566889999987666554 4799
Q ss_pred hhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCeEEE
Q 000524 326 GGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQIVY 405 (1444)
Q Consensus 326 GGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~iv~ 405 (1444)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.... +++|+.++|+.+++.+++|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSER-QRTLLMVTHHLSDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHhhcCeEEEEECCeEEE
Confidence 999999999999999999999999999999999999999999886533 4555557888888889999999999999999
Q ss_pred ecC
Q 000524 406 QGP 408 (1444)
Q Consensus 406 ~G~ 408 (1444)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 875
No 431
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=315.49 Aligned_cols=218 Identities=19% Similarity=0.250 Sum_probs=174.2
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC--c-eEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--G-YITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~-~~~G~i~i~g 922 (1444)
.+.++|+++.++ .+.+|+|+|++|++||+++|+|+||||||||+++|+|.... . +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 378899988763 23699999999999999999999999999999999996431 1 2479999999
Q ss_pred ccCC-----cccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCC
Q 000524 923 YPKK-----QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 923 ~~~~-----~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~ 997 (1444)
.++. ...+++.++|++|++.+++ .|+.||+.+....+. .. ...++.++++++.+++.+..+.... ..+.
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~---~~-~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~ 150 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARING---YK-GDMDELVERSLRQAALWDEVKDKLK-QSGL 150 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcC---cc-hHHHHHHHHHHHHhCchhhHHHHhc-CCcc
Confidence 8753 1234567899999988877 599999987654321 11 1233456778888887532111111 1246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec---
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR--- 1074 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~--- 1074 (1444)
.||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.||++++|++
T Consensus 151 ~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~ 228 (264)
T PRK14243 151 SLSGGQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELT 228 (264)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccc
Confidence 7999999999999999999999999999999999999999999999975 589999999986 68899999999982
Q ss_pred -----CcEEEEEcCC
Q 000524 1075 -----GGQEIYVGPL 1084 (1444)
Q Consensus 1075 -----gg~~~y~G~~ 1084 (1444)
.|+++..|+.
T Consensus 229 ~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 229 EGGGRYGYLVEFDRT 243 (264)
T ss_pred cccccCceEEEeCCH
Confidence 4899999875
No 432
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-33 Score=303.62 Aligned_cols=196 Identities=27% Similarity=0.391 Sum_probs=170.5
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC-------ccceEEEEcCCCCCCCCCC
Q 000524 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1444)
++++..+.-.+|||-|+||||||||+|+|+|+..|+ +|.|.+||..+.+.. .+|++|||+||-.+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 577777775799999999999999999999999998 999999998764321 2589999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+-||.|+.... .....|.+.+.||++|..+.+ +.
T Consensus 93 VrgNL~YG~~~~----------------------------------------~~~~fd~iv~lLGI~hLL~R~-----P~ 127 (352)
T COG4148 93 VRGNLRYGMWKS----------------------------------------MRAQFDQLVALLGIEHLLDRY-----PG 127 (352)
T ss_pred Eecchhhhhccc----------------------------------------chHhHHHHHHHhCcHHHHhhC-----CC
Confidence 999999975321 001246788999999988754 45
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.|||||||||+|||||++.|++|+||||.+.||-....+|+-.|.++.++ -+.-|+.++|-..|+.+++|+|++|++|+
T Consensus 128 ~LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e-~~IPIlYVSHS~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 128 TLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDE-INIPILYVSHSLDEVLRLADRVVVLENGK 206 (352)
T ss_pred ccCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHh-cCCCEEEEecCHHHHHhhhheEEEecCCe
Confidence 79999999999999999999999999999999999999999999998764 45667778999999999999999999999
Q ss_pred EEEecChhhHHH
Q 000524 403 IVYQGPRELVLE 414 (1444)
Q Consensus 403 iv~~G~~~~~~~ 414 (1444)
+...|+.+++.+
T Consensus 207 V~A~g~~e~v~~ 218 (352)
T COG4148 207 VKASGPLEEVWG 218 (352)
T ss_pred EEecCcHHHHhc
Confidence 999999998853
No 433
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=6e-33 Score=360.67 Aligned_cols=208 Identities=28% Similarity=0.469 Sum_probs=168.3
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
.++|+|+|++|+|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+|. .
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~-~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFY-G 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhhhh-h
Confidence 35899999999999999999999999999999999999998 9999999999987654 578999999987776 5
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
|++|||.++.. +.+.++..+++...+ .++.++ .|++..||.+|+.+
T Consensus 554 TI~eNi~~~~~-------------------------~~~~~~i~~a~~~~~------l~~~i~--~lp~gl~T~i~e~G- 599 (694)
T TIGR03375 554 TLRDNIALGAP-------------------------YADDEEILRAAELAG------VTEFVR--RHPDGLDMQIGERG- 599 (694)
T ss_pred hHHHHHhCCCC-------------------------CCCHHHHHHHHHHcC------hHHHHH--hCcccccceecCCC-
Confidence 99999987521 111111111111111 111222 46778899999865
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
..||||||||++||||++++|++++||||||+||+.+...|.+.|+++. .++|+|+ ++|.. ++.+.+|+|++|++|
T Consensus 600 ~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~--~~~T~ii-ItHrl-~~~~~~D~iivl~~G 675 (694)
T TIGR03375 600 RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL--AGKTLVL-VTHRT-SLLDLVDRIIVMDNG 675 (694)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCCEEEE-EecCH-HHHHhCCEEEEEeCC
Confidence 4799999999999999999999999999999999999999999998864 3456666 44544 456889999999999
Q ss_pred eEEEecChhhHHH
Q 000524 402 QIVYQGPRELVLE 414 (1444)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1444)
+++++|+++++++
T Consensus 676 ~i~e~G~~~eLl~ 688 (694)
T TIGR03375 676 RIVADGPKDQVLE 688 (694)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999999865
No 434
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-33 Score=316.93 Aligned_cols=209 Identities=25% Similarity=0.373 Sum_probs=170.3
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 46999999999999999999999999999999999999887 9999999988754322 35699999998888889
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
||.||+.++..-.. ..+ .... .+....++.+++.+||++..++.+
T Consensus 92 tv~~~i~~~~~~~~--~~~----------------~~~~------------~~~~~~~~~~l~~~~l~~~~~~~~----- 136 (255)
T PRK11231 92 TVRELVAYGRSPWL--SLW----------------GRLS------------AEDNARVNQAMEQTRINHLADRRL----- 136 (255)
T ss_pred cHHHHHHhccchhh--hhc----------------cCCC------------HHHHHHHHHHHHHcCCHHHHcCCc-----
Confidence 99999988531000 000 0000 001123567888999987666654
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
+.|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.. .+ ++|+.++|+.+++.+++|++++|++|
T Consensus 137 ~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~~-~tiii~tH~~~~~~~~~d~i~~l~~G 214 (255)
T PRK11231 137 TDLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-QG-KTVVTVLHDLNQASRYCDHLVVLANG 214 (255)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CC-CEEEEEECCHHHHHHhcCEEEEEECC
Confidence 46999999999999999999999999999999999999999999998764 34 45555778888999999999999999
Q ss_pred eEEEecChhhHH
Q 000524 402 QIVYQGPRELVL 413 (1444)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1444)
++++.|+.+++.
T Consensus 215 ~i~~~~~~~~~~ 226 (255)
T PRK11231 215 HVMAQGTPEEVM 226 (255)
T ss_pred eEEEEcCHHHhc
Confidence 999999987663
No 435
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=5.1e-33 Score=360.60 Aligned_cols=206 Identities=23% Similarity=0.391 Sum_probs=162.3
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
+++|+|+|++++|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+|. .
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~-g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFS-G 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCccccc-c
Confidence 46899999999999999999999999999999999999998 9999999999887654 478999999987665 6
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
|+||||.++..-. +.++..+++...+ .++.++ .|++..||.+|+.+
T Consensus 570 TIreNI~~g~~~~-------------------------~~e~i~~al~~a~------l~~~i~--~lp~GldT~ige~G- 615 (711)
T TIGR00958 570 SVRENIAYGLTDT-------------------------PDEEIMAAAKAAN------AHDFIM--EFPNGYDTEVGEKG- 615 (711)
T ss_pred CHHHHHhcCCCCC-------------------------CHHHHHHHHHHcC------CHHHHH--hCCCccCCcccCCC-
Confidence 9999999863210 0011111111100 111222 35667899999764
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
..||||||||++||||++++|+|++||||||+||+.+...|.+ ... ..++|+|+ ++|.. ++.+.+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~~---~~~~TvIi-ItHrl-~~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SRS---RASRTVLL-IAHRL-STVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hhc---cCCCeEEE-EeccH-HHHHhCCEEEEEECC
Confidence 5799999999999999999999999999999999999998888 221 23455555 55554 456779999999999
Q ss_pred eEEEecChhhHHH
Q 000524 402 QIVYQGPRELVLE 414 (1444)
Q Consensus 402 ~iv~~G~~~~~~~ 414 (1444)
+|+++|+++++++
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999999865
No 436
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=8.3e-33 Score=316.18 Aligned_cols=208 Identities=27% Similarity=0.396 Sum_probs=170.0
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
..+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 45999999999999999999999999999999999999987 9999999998765432 34689999998778889
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
||+||+.++..... ... . .+ . .+....++.+++.+||.+..++.+
T Consensus 91 tv~e~l~~~~~~~~---------~~~------~-~~-~-------------~~~~~~~~~~l~~~~l~~~~~~~~----- 135 (256)
T TIGR03873 91 TVRDVVALGRIPHR---------SLW------A-GD-S-------------PHDAAVVDRALARTELSHLADRDM----- 135 (256)
T ss_pred CHHHHHHhcchhhh---------hhc------c-CC-C-------------HHHHHHHHHHHHHcCcHhhhcCCc-----
Confidence 99999987531000 000 0 00 0 001123567788999987666554
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
..|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.. .+ ++|+.++|..+++.+++|+|++|++|
T Consensus 136 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~-~tiii~sH~~~~~~~~~d~i~~l~~G 213 (256)
T TIGR03873 136 STLSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-TG-VTVVAALHDLNLAASYCDHVVVLDGG 213 (256)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-cC-CEEEEEeCCHHHHHHhCCEEEEEeCC
Confidence 46999999999999999999999999999999999999999999998753 34 45666778888999999999999999
Q ss_pred eEEEecChhhH
Q 000524 402 QIVYQGPRELV 412 (1444)
Q Consensus 402 ~iv~~G~~~~~ 412 (1444)
++++.|+.+++
T Consensus 214 ~i~~~g~~~~~ 224 (256)
T TIGR03873 214 RVVAAGPPREV 224 (256)
T ss_pred CEEEecCHHHh
Confidence 99999998765
No 437
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-32 Score=312.80 Aligned_cols=218 Identities=22% Similarity=0.283 Sum_probs=176.0
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCC--C-ceEEEEEEEcCc
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKT--G-GYITGNITISGY 923 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~--~-~~~~G~i~i~g~ 923 (1444)
+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|... + .+.+|+|.+||.
T Consensus 4 l~~~~v~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~ 70 (250)
T PRK14266 4 IEVENLNTYFD-------------DAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGV 70 (250)
T ss_pred EEEEeEEEEeC-------------CeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCE
Confidence 67888887763 2469999999999999999999999999999999999643 1 125799999998
Q ss_pred cCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCc
Q 000524 924 PKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSG 998 (1444)
Q Consensus 924 ~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~ 998 (1444)
++.. ...++.++|++|++.+++. |+.||+.+...... ..+.+...+.+.++++.+++.+....... .....
T Consensus 71 ~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~ 146 (250)
T PRK14266 71 DIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHG--EDDEDFIEERVEESLKAAALWDEVKDKLD-KSALG 146 (250)
T ss_pred EcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcC--CCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCccc
Confidence 7642 1345679999999888874 99999987643221 11223345668889999998643222222 22568
Q ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEE
Q 000524 999 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQE 1078 (1444)
Q Consensus 999 lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~ 1078 (1444)
||+|||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 147 LS~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~i 223 (250)
T PRK14266 147 LSGGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GEI 223 (250)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-CeE
Confidence 999999999999999999999999999999999999999999999854 899999999986 68888999999985 799
Q ss_pred EEEcCC
Q 000524 1079 IYVGPL 1084 (1444)
Q Consensus 1079 ~y~G~~ 1084 (1444)
++.|+.
T Consensus 224 ~~~g~~ 229 (250)
T PRK14266 224 IESGLT 229 (250)
T ss_pred EEeCCH
Confidence 999875
No 438
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-32 Score=296.29 Aligned_cols=168 Identities=28% Similarity=0.415 Sum_probs=148.3
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
.++|+++.++ ...+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (173)
T cd03230 2 EVRNLSKRYG-------------KKTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKP--DSGEIKVLGKDIKK 66 (173)
T ss_pred EEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCeEEEECCEEccc
Confidence 4677776653 23599999999999999999999999999999999998653 48999999987643
Q ss_pred --ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000524 928 --ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 1005 (1444)
Q Consensus 928 --~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1005 (1444)
..+++.++|++|++.+++..|+.|++. |||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~~~--------------------------------------------LS~G~~q 102 (173)
T cd03230 67 EPEEVKRRIGYLPEEPSLYENLTVRENLK--------------------------------------------LSGGMKQ 102 (173)
T ss_pred chHhhhccEEEEecCCccccCCcHHHHhh--------------------------------------------cCHHHHH
Confidence 234567899999998888899999873 8999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecC
Q 000524 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1075 (1444)
Q Consensus 1006 Rl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~g 1075 (1444)
|++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|.|||+++|++. ++.+.+|++++|++|
T Consensus 103 rv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 103 RLALAQALLHDPELLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999877899999999986 577789999999874
No 439
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=344.40 Aligned_cols=216 Identities=28% Similarity=0.328 Sum_probs=179.9
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
-++++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p--~~G~I~~~g~~i 68 (501)
T PRK11288 4 YLSFDGIGKTFP-------------GVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQP--DAGSILIDGQEM 68 (501)
T ss_pred eEEEeeeEEEEC-------------CEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCCEEEECCEEC
Confidence 377889888763 24699999999999999999999999999999999997653 479999999876
Q ss_pred Cc----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCH
Q 000524 926 KQ----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 926 ~~----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSg 1001 (1444)
.. ..+++.+||++|++.+++.+||.|++.+....+.....+..+.++.++++++.++|.+..+.. +..|||
T Consensus 69 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSg 143 (501)
T PRK11288 69 RFASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSI 143 (501)
T ss_pred CCCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCH
Confidence 42 123567899999998899999999998853211111122334445688999999998766655 357999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEE
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYV 1081 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~ 1081 (1444)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|++++++|+|||+++|++. ++.+.||++++|++ |+++..
T Consensus 144 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~ 221 (501)
T PRK11288 144 GQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVAT 221 (501)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEee
Confidence 9999999999999999999999999999999999999999999878999999999986 57788999999986 788876
Q ss_pred cC
Q 000524 1082 GP 1083 (1444)
Q Consensus 1082 G~ 1083 (1444)
++
T Consensus 222 ~~ 223 (501)
T PRK11288 222 FD 223 (501)
T ss_pred cC
Confidence 65
No 440
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-32 Score=312.21 Aligned_cols=215 Identities=23% Similarity=0.314 Sum_probs=174.6
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC--c--eEEEEEEEcC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG--G--YITGNITISG 922 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~--~--~~~G~i~i~g 922 (1444)
+.++++++++. ++.+|+|+||.+.+||+++|+|+||||||||+++|+|...+ | .+.|++.++|
T Consensus 11 i~~~~~~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g 77 (257)
T PRK14246 11 FNISRLYLYIN-------------DKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFG 77 (257)
T ss_pred eeeeeEEEecC-------------CceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECC
Confidence 77888887763 34699999999999999999999999999999999997542 2 1236666666
Q ss_pred ccCCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc----ccccccCCC
Q 000524 923 YPKKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL----IQSLVGLPG 995 (1444)
Q Consensus 923 ~~~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~----~~~~vg~~~ 995 (1444)
.+... ...++.++|++|++.+++.+|++||+.+...... ....++..+.++++++.+++.+. .+..
T Consensus 78 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----- 150 (257)
T PRK14246 78 KDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHG--IKEKREIKKIVEECLRKVGLWKEVYDRLNSP----- 150 (257)
T ss_pred cccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHcCCCccchhhhcCC-----
Confidence 65432 2345678999999999999999999988643321 11233344568899999999642 2332
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecC
Q 000524 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1075 (1444)
Q Consensus 996 ~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~g 1075 (1444)
+..||+|||||++|||+|+.+|++|+|||||+|||..+...+.+.|+++.+ ++|||+++|++. .+.+.||++++|++
T Consensus 151 ~~~LS~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~- 227 (257)
T PRK14246 151 ASQLSGGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN- 227 (257)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC-
Confidence 467999999999999999999999999999999999999999999999864 699999999986 57789999999985
Q ss_pred cEEEEEcCC
Q 000524 1076 GQEIYVGPL 1084 (1444)
Q Consensus 1076 g~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 228 g~i~~~g~~ 236 (257)
T PRK14246 228 GELVEWGSS 236 (257)
T ss_pred CEEEEECCH
Confidence 799999875
No 441
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=2.1e-32 Score=312.47 Aligned_cols=214 Identities=26% Similarity=0.297 Sum_probs=172.6
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc--
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP-- 924 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~-- 924 (1444)
+.++|+++.++ ...+|+|+|+++++||+++|+|+||||||||+++|+|...+ .+|+|.++|.+
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~ 68 (253)
T TIGR02323 4 LQVSGLSKSYG-------------GGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAP--DHGTATYIMRSGA 68 (253)
T ss_pred EEEeeeEEEeC-------------CceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEEeccccc
Confidence 67888887763 23589999999999999999999999999999999998653 48999999976
Q ss_pred ---CCcc-------cccceEEEEecCCC--CCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcc-cccccc
Q 000524 925 ---KKQE-------TFARISGYCEQNDI--HSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKP-LIQSLV 991 (1444)
Q Consensus 925 ---~~~~-------~~~~~~gyv~q~~~--~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~-~~~~~v 991 (1444)
+... ..++.++|++|++. ..+.+|+.|++.+..... .. .......+.++++++.+++.+ ..++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~-~~-~~~~~~~~~~~~~l~~l~l~~~~~~~~- 145 (253)
T TIGR02323 69 ELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAI-GA-RHYGNIRAAAHDWLEEVEIDPTRIDDL- 145 (253)
T ss_pred ccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHh-cc-cchHHHHHHHHHHHHHcCCChhhhhcC-
Confidence 3221 12346899999975 345678999986542211 11 111233456889999999963 55554
Q ss_pred cCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEE
Q 000524 992 GLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELF 1070 (1444)
Q Consensus 992 g~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ 1070 (1444)
++.||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|++. ++.+.+|+++
T Consensus 146 ----~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~ 220 (253)
T TIGR02323 146 ----PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLL 220 (253)
T ss_pred ----chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEE
Confidence 4679999999999999999999999999999999999999999999998764 899999999986 5777899999
Q ss_pred EEecCcEEEEEcCC
Q 000524 1071 LMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1071 ll~~gg~~~y~G~~ 1084 (1444)
+|++ |++++.|+.
T Consensus 221 ~l~~-G~i~~~~~~ 233 (253)
T TIGR02323 221 VMQQ-GRVVESGLT 233 (253)
T ss_pred EEEC-CEEEEECCH
Confidence 9986 799999875
No 442
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=315.53 Aligned_cols=212 Identities=21% Similarity=0.333 Sum_probs=166.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CeecEEEECCccCCCC-----CccceEEEEcCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++|.- ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (258)
T PRK14241 17 FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNP 96 (258)
T ss_pred EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEcccccc
Confidence 358999999999999999999999999999999999986410 1389999999887421 124579999999989
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1444)
++.+||+||+.++....+.... .+....++.+++.+||........
T Consensus 97 ~~~~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 142 (258)
T PRK14241 97 FPTMSIRDNVVAGLKLNGVRNK---------------------------------KDLDELVEKSLRGANLWNEVKDRL- 142 (258)
T ss_pred CCCCcHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-
Confidence 9999999999886543210000 001123566788888742111111
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1444)
+..+..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +. +|+.++|+..++.+++|+|++
T Consensus 143 ~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~-tviivsH~~~~~~~~~d~i~~ 219 (258)
T PRK14241 143 DKPGGGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--DY-TIVIVTHNMQQAARVSDQTAF 219 (258)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CC-EEEEEecCHHHHHHhCCEEEE
Confidence 234457999999999999999999999999999999999999999999998853 34 555577888889999999999
Q ss_pred Ec------CCeEEEecChhhHH
Q 000524 398 LS------DGQIVYQGPRELVL 413 (1444)
Q Consensus 398 L~------~G~iv~~G~~~~~~ 413 (1444)
|+ +|++++.|+.+++.
T Consensus 220 l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 220 FNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EecccCCCCceEEecCCHHHHH
Confidence 97 79999999988764
No 443
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=314.15 Aligned_cols=210 Identities=18% Similarity=0.275 Sum_probs=166.3
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcC---CCCCCCeecEEEECCccCCCCC-----ccceEEEEcCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGK---LDSSLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDN 236 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~---l~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~ 236 (1444)
+++|+|+|+.+++|++++|+||||||||||+++|+|. .++. ..+|+|.++|+++.... .++.++|++|++.
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 3599999999999999999999999999999999997 3331 13899999999875421 2357999999988
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1444)
+++ .||+||+.++.+..+.... ......++++++.+||.+...+..
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~ 140 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGVKDN---------------------------------AFIRQRVEETLKGAALWDEVKDKL 140 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCcH---------------------------------HHHHHHHHHHHHHcCCCcchhhhh
Confidence 776 6999999886543211000 001123566788888864322222
Q ss_pred cCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEE
Q 000524 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1444)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1444)
+...+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .+ ++|+.++|+..++.+.+|+|+
T Consensus 141 -~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiivtH~~~~~~~~~d~v~ 216 (250)
T PRK14245 141 -KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK--KD-YTIVIVTHNMQQAARVSDKTA 216 (250)
T ss_pred -hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhCCEEE
Confidence 23455799999999999999999999999999999999999999999999874 24 455557788888999999999
Q ss_pred EEcCCeEEEecChhhHH
Q 000524 397 LLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1444)
+|++|+++++|+.+++.
T Consensus 217 ~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 217 FFYMGEMVEYDDTKKIF 233 (250)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999998874
No 444
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=5.8e-33 Score=308.89 Aligned_cols=195 Identities=22% Similarity=0.369 Sum_probs=161.7
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCC-----CccceEEEEcCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNHIG 239 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~~ 239 (1444)
+.+|+|+|+.++||++++|+|||||||||||++|+|.++|+ +|+|.++|+++... ..++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 45999999999999999999999999999999999999987 99999999987421 12467999999998899
Q ss_pred CCCHHHHHHHhhh-hcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 240 EMTVRETLAFSAR-CQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 240 ~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
.+||+||+.++.. .++.. . .+....++.+++.+||++..++.+
T Consensus 90 ~~t~~e~l~~~~~~~~~~~------~----------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 133 (213)
T cd03262 90 HLTVLENITLAPIKVKGMS------K----------------------------AEAEERALELLEKVGLADKADAYP-- 133 (213)
T ss_pred CCcHHHHHHhHHHHhcCCC------H----------------------------HHHHHHHHHHHHHcCCHhHhhhCc--
Confidence 9999999988642 11100 0 001123566788999987666554
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
+.|||||||||+||++++.+|++++|||||+|||+.+...+.+.|++++. .+ ++|+.++|+..++.+++|+|++|
T Consensus 134 ---~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~-~tvi~~sh~~~~~~~~~d~i~~l 208 (213)
T cd03262 134 ---AQLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EG-MTMVVVTHEMGFAREVADRVIFM 208 (213)
T ss_pred ---cccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-cC-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 47999999999999999999999999999999999999999999999864 34 44555788888999999999999
Q ss_pred cCCeE
Q 000524 399 SDGQI 403 (1444)
Q Consensus 399 ~~G~i 403 (1444)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 445
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.1e-32 Score=308.73 Aligned_cols=203 Identities=22% Similarity=0.370 Sum_probs=166.9
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
-+.++|+++.+. ++.+|+|+|+++++||+++|+||||||||||+++|+|... +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLAG-------------DAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEeeC-------------CceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 478899988763 2369999999999999999999999999999999999764 3489999999875
Q ss_pred Cc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCCcCCH
Q 000524 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVSGLST 1001 (1444)
Q Consensus 926 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~~lSg 1001 (1444)
.. ..+++.++|++|++.+++ .|++||+.+....+.. .. .++.++++++.+++. ...++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~---~~--~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~ 140 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQ---QP--DPAIFLDDLERFALPDTILTKN-----IAELSG 140 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCC---Ch--HHHHHHHHHHHcCCChHHhcCC-----cccCCH
Confidence 42 224567899999988877 5999999875443321 11 123477899999996 345554 457999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 1002 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 1002 GqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
|||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++.++ |.|||+++|++. ++ +.+|++++|++.+
T Consensus 141 G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~-~~-~~~d~i~~l~~~~ 214 (225)
T PRK10247 141 GEKQRISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKD-EI-NHADKVITLQPHA 214 (225)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChH-HH-HhCCEEEEEeccc
Confidence 9999999999999999999999999999999999999999998764 899999999986 35 5699999996433
No 446
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.8e-33 Score=352.30 Aligned_cols=200 Identities=29% Similarity=0.452 Sum_probs=164.6
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1444)
++|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+|+ .|
T Consensus 354 ~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~t 429 (574)
T PRK11160 354 PVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-AT 429 (574)
T ss_pred cceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-cc
Confidence 5899999999999999999999999999999999999998 9999999999887654 467999999987765 69
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCC------cccccccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGL------EVCADTMV 316 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL------~~~~dt~v 316 (1444)
++||+.++..- .+.++ ++..++..|+ ++..||.|
T Consensus 430 i~~Ni~~~~~~-------------------------~~~~~---------------i~~al~~~~l~~~i~~p~GldT~v 469 (574)
T PRK11160 430 LRDNLLLAAPN-------------------------ASDEA---------------LIEVLQQVGLEKLLEDDKGLNAWL 469 (574)
T ss_pred HHHHhhcCCCc-------------------------cCHHH---------------HHHHHHHcCCHHHHcCccccCchh
Confidence 99999886310 00001 1112222222 56789999
Q ss_pred cCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEE
Q 000524 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1444)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1444)
|+.+ +.||||||||++|||+++++|++++|||||++||+.++..|.+.|++.. .++|+|++. |..+. ...+|+|+
T Consensus 470 ge~g-~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~~~tviiit-Hr~~~-~~~~d~i~ 544 (574)
T PRK11160 470 GEGG-RQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--QNKTVLMIT-HRLTG-LEQFDRIC 544 (574)
T ss_pred cCCC-CCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--CCCEEEEEe-cChhH-HHhCCEEE
Confidence 9764 5799999999999999999999999999999999999999999999864 356666654 44444 46799999
Q ss_pred EEcCCeEEEecChhhHHH
Q 000524 397 LLSDGQIVYQGPRELVLE 414 (1444)
Q Consensus 397 lL~~G~iv~~G~~~~~~~ 414 (1444)
+|++|++++.|+++++++
T Consensus 545 ~l~~G~i~~~g~~~~l~~ 562 (574)
T PRK11160 545 VMDNGQIIEQGTHQELLA 562 (574)
T ss_pred EEeCCeEEEeCCHHHHHh
Confidence 999999999999998864
No 447
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=316.11 Aligned_cols=211 Identities=21% Similarity=0.323 Sum_probs=166.2
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCeecEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNHI 238 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1444)
.+|+|+|+.|+||++++|+|||||||||||++|+|.++|. ...+|+|+++|+++... ..++.++|++|++..+
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 112 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPF 112 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCC
Confidence 5899999999999999999999999999999999998741 01389999999987532 1245799999998878
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+. ||.||+.++.+.++.... + .+....++.+++.+||.+...... +
T Consensus 113 ~~-tv~enl~~~~~~~~~~~~--------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-~ 158 (267)
T PRK14235 113 PK-SIYENVAYGPRIHGLARS--------K------------------------AELDEIVETSLRKAGLWEEVKDRL-H 158 (267)
T ss_pred CC-cHHHHHHHHHHhcccccc--------h------------------------HHHHHHHHHHHHHcCCchhhhHHh-h
Confidence 74 999999987543221000 0 001123566788889864211111 2
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
..++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++.+ +. +|+.++|+.+++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~~-tiiivtH~~~~~~~~~d~v~~l 235 (267)
T PRK14235 159 EPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--NY-TIVIVTHSMQQAARVSQRTAFF 235 (267)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--CC-eEEEEEcCHHHHHhhCCEEEEE
Confidence 33457999999999999999999999999999999999999999999998753 44 5555778888889999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|+++.+|+.+++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 236 HLGNLVEVGDTEKMF 250 (267)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 448
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.6e-32 Score=314.11 Aligned_cols=207 Identities=24% Similarity=0.348 Sum_probs=167.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCcc-----CCCCCc-------cceEEEEc
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHD-----MGEFVP-------ERTAAYIS 232 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~-----~~~~~~-------~~~~~yv~ 232 (1444)
+.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++
T Consensus 19 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~ 95 (258)
T PRK11701 19 RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVH 95 (258)
T ss_pred ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEe
Confidence 35899999999999999999999999999999999999987 9999999987 654322 24699999
Q ss_pred CCCC--CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcc
Q 000524 233 QHDN--HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV 310 (1444)
Q Consensus 233 Q~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~ 310 (1444)
|++. +.+.+|+.||+.+.....+... + .+....++++++.+|+.+
T Consensus 96 q~~~~~~~~~~~~~~~i~~~~~~~~~~~-~--------------------------------~~~~~~~~~~l~~~~l~~ 142 (258)
T PRK11701 96 QHPRDGLRMQVSAGGNIGERLMAVGARH-Y--------------------------------GDIRATAGDWLERVEIDA 142 (258)
T ss_pred eCcccccCccccHHHHHHHHHHHhccCc-H--------------------------------HHHHHHHHHHHHHcCCCh
Confidence 9973 5777899999976432110000 0 001123567888999964
Q ss_pred -cccccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHH
Q 000524 311 -CADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETY 389 (1444)
Q Consensus 311 -~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~ 389 (1444)
..++. +..|||||||||+|||||+.+|++++|||||+|||+.+...+.+.|+++.... +.+|+.++|+..++.
T Consensus 143 ~~~~~~-----~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~-~~tii~isH~~~~~~ 216 (258)
T PRK11701 143 ARIDDL-----PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVREL-GLAVVIVTHDLAVAR 216 (258)
T ss_pred hHHhCC-----CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhc-CcEEEEEeCCHHHHH
Confidence 44543 35799999999999999999999999999999999999999999999876533 456666888888999
Q ss_pred hhcCeEEEEcCCeEEEecChhhHH
Q 000524 390 DLFDDIILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 390 ~~fD~vilL~~G~iv~~G~~~~~~ 413 (1444)
+.+|+|++|++|++++.|+.+++.
T Consensus 217 ~~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 217 LLAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred HhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999988763
No 449
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.1e-33 Score=325.73 Aligned_cols=201 Identities=28% Similarity=0.411 Sum_probs=165.2
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
.++|+|+|+++++||.+||+|++|||||||++.|+|-++|+ +|+|+.||.++.+... ++.++.++|.. |+..-
T Consensus 351 ~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~-hlF~~ 426 (573)
T COG4987 351 TKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQRV-HLFSG 426 (573)
T ss_pred cchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccch-HHHHH
Confidence 46999999999999999999999999999999999999998 9999999999887765 46889999976 55567
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhC-------Ccccccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLG-------LEVCADT 314 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lg-------L~~~~dt 314 (1444)
|+|+||..+.. +... +.+ -++++..| .++..||
T Consensus 427 Tlr~NL~lA~~-------------------------~AsD-Eel--------------~~aL~qvgL~~l~~~~p~gl~t 466 (573)
T COG4987 427 TLRDNLRLANP-------------------------DASD-EEL--------------WAALQQVGLEKLLESAPDGLNT 466 (573)
T ss_pred HHHHHHhhcCC-------------------------CCCH-HHH--------------HHHHHHcCHHHHHHhChhhhhc
Confidence 99999998632 1111 111 11223333 3456688
Q ss_pred cccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCe
Q 000524 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1444)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1444)
.+|+.+ +.||||||||++|||+|++++++++|||||.|||+.|..++++.|.+.+ .++|+++ ++|+... .+.||+
T Consensus 467 ~lge~G-~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~--~~kTll~-vTHrL~~-le~~dr 541 (573)
T COG4987 467 WLGEGG-RRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA--EGKTLLM-VTHRLRG-LERMDR 541 (573)
T ss_pred hhccCC-CcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh--cCCeEEE-Eeccccc-HhhcCE
Confidence 999755 5799999999999999999999999999999999999999999998754 4566655 5665554 467899
Q ss_pred EEEEcCCeEEEecChhhHHH
Q 000524 395 IILLSDGQIVYQGPRELVLE 414 (1444)
Q Consensus 395 vilL~~G~iv~~G~~~~~~~ 414 (1444)
|++|++|+++++|.+.+++.
T Consensus 542 Iivl~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 542 IIVLDNGKIIEEGTHAELLA 561 (573)
T ss_pred EEEEECCeeeecCCHHhhhc
Confidence 99999999999999998874
No 450
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=4.5e-33 Score=361.10 Aligned_cols=211 Identities=26% Similarity=0.402 Sum_probs=175.6
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCcc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYP 924 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~ 924 (1444)
..++|+||+|+|+.. +++.+|+|+|++|+|||++||+||||||||||+++|+|...+ .+|+|.+||.|
T Consensus 477 ~~I~~~nVsf~Y~~~----------~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~ 544 (711)
T TIGR00958 477 GLIEFQDVSFSYPNR----------PDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQP--TGGQVLLDGVP 544 (711)
T ss_pred CeEEEEEEEEECCCC----------CCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCC--CCCEEEECCEE
Confidence 469999999998631 124699999999999999999999999999999999998764 48999999998
Q ss_pred CCc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-------ccccccCC
Q 000524 925 KKQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-------IQSLVGLP 994 (1444)
Q Consensus 925 ~~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-------~~~~vg~~ 994 (1444)
+++ ..+++.++||+|++.++. .|++||+.++. + +.+ ++.++++++..++.+. .|+.+|..
T Consensus 545 i~~~~~~~lr~~i~~v~Q~~~lF~-gTIreNI~~g~----~-~~~----~e~i~~al~~a~l~~~i~~lp~GldT~ige~ 614 (711)
T TIGR00958 545 LVQYDHHYLHRQVALVGQEPVLFS-GSVRENIAYGL----T-DTP----DEEIMAAAKAANAHDFIMEFPNGYDTEVGEK 614 (711)
T ss_pred HHhcCHHHHHhhceEEecCccccc-cCHHHHHhcCC----C-CCC----HHHHHHHHHHcCCHHHHHhCCCccCCcccCC
Confidence 654 346778999999998875 79999998752 1 122 3347788888887654 45666654
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
..+||||||||++|||+|+++|+||+||||||+||++++..+++ .. ..+++|+|+++|+++ ..+.+|+|++|++
T Consensus 615 -G~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~--~~~~~TvIiItHrl~--~i~~aD~IivL~~ 688 (711)
T TIGR00958 615 -GSQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR--SRASRTVLLIAHRLS--TVERADQILVLKK 688 (711)
T ss_pred -CCcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh--ccCCCeEEEEeccHH--HHHhCCEEEEEEC
Confidence 46899999999999999999999999999999999999999998 22 235899999999985 5678999999985
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 689 -G~ive~Gt~ 697 (711)
T TIGR00958 689 -GSVVEMGTH 697 (711)
T ss_pred -CEEEEeeCH
Confidence 899999984
No 451
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-32 Score=312.88 Aligned_cols=211 Identities=20% Similarity=0.315 Sum_probs=165.9
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCeecEEEECCccCCCCC-----ccceEEEEcCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFV-----PERTAAYISQHDNH 237 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1444)
+.+|+|+|+.+++||+++|+|||||||||||++|+|..+|. ...+|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35899999999999999999999999999999999998751 113899999999875321 24579999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1444)
++ +|++||+.|.....+.... .+...+++.+++.+||........
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 141 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKDK---------------------------------KELDKIVEWALKKAALWDEVKDDL- 141 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCcH---------------------------------HHHHHHHHHHHHHcCCchhhhhHh-
Confidence 87 8999999986543221000 001123456678888742110111
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1444)
+...+.||||||||++||++++.+|++++|||||+|||+.++.++.+.|+++.. +. +|+.++|+..++.+++|+|++
T Consensus 142 ~~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~~-tiiivsH~~~~~~~~~d~v~~ 218 (251)
T PRK14270 142 KKSALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--EY-TIVIVTHNMQQASRVSDYTAF 218 (251)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CC-eEEEEEcCHHHHHHhcCEEEE
Confidence 234557999999999999999999999999999999999999999999998753 34 455577778889999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000524 398 LSDGQIVYQGPRELVL 413 (1444)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1444)
|++|++++.|+.+++.
T Consensus 219 l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 219 FLMGDLIEFNKTEKIF 234 (251)
T ss_pred EECCeEEEeCCHHHHh
Confidence 9999999999988764
No 452
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-32 Score=305.96 Aligned_cols=192 Identities=27% Similarity=0.395 Sum_probs=160.1
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC-------ccceEEEEcCCCCCCCCCC
Q 000524 170 DVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV-------PERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 170 ~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 242 (1444)
|+|+.+++ ++++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999987 999999998864311 2357999999998898999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
++||+.+..... .. . .....++.+++.+||++..+..+ +
T Consensus 92 ~~~~l~~~~~~~---~~--------~-------------------------~~~~~~~~~l~~~~l~~~~~~~~-----~ 130 (214)
T cd03297 92 VRENLAFGLKRK---RN--------R-------------------------EDRISVDELLDLLGLDHLLNRYP-----A 130 (214)
T ss_pred HHHHHHHHHhhC---CH--------H-------------------------HHHHHHHHHHHHcCCHhHhhcCc-----c
Confidence 999998764211 00 0 00123566788999987666544 4
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.||||||||++||++++.+|++++|||||+|||+.++..+.+.|++++...+ ++|+.++|+.+++.+++|++++|++|+
T Consensus 131 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tiii~sH~~~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 131 QLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLN-IPVIFVTHDLSEAEYLADRIVVMEDGR 209 (214)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcC-cEEEEEecCHHHHHHhcCEEEEEECCE
Confidence 6999999999999999999999999999999999999999999999875334 455667788888999999999999999
Q ss_pred EEEec
Q 000524 403 IVYQG 407 (1444)
Q Consensus 403 iv~~G 407 (1444)
++.+|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98875
No 453
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=1.5e-32 Score=312.24 Aligned_cols=197 Identities=25% Similarity=0.372 Sum_probs=167.9
Q ss_pred EeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc---ccccceEEEEecCCCCCCCCcHH
Q 000524 874 LLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ---ETFARISGYCEQNDIHSPFVTVY 950 (1444)
Q Consensus 874 iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~---~~~~~~~gyv~q~~~~~~~lTv~ 950 (1444)
+|+|+|+.+++||+++|+|+||||||||+++|+|... .+|+|.++|.+... ...++.++|++|++.+++.+|++
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999763 27999999987643 12345689999998888889999
Q ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhh-------CCCEEEEe
Q 000524 951 ESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVA-------NPSIIFMD 1023 (1444)
Q Consensus 951 e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~-------~p~illLD 1023 (1444)
|++.+.... ....+...+.++++++.++|.+..++. +..||||||||++||++|+. +|++|+||
T Consensus 88 ~nl~~~~~~----~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~~~~~~p~p~llllD 158 (248)
T PRK03695 88 QYLTLHQPD----KTRTEAVASALNEVAEALGLDDKLGRS-----VNQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLD 158 (248)
T ss_pred HHHHhcCcc----CCCcHHHHHHHHHHHHHcCCHhHhcCC-----cccCCHHHHHHHHHHHHHhccccccCCCCCEEEEc
Confidence 999875321 112223345688999999998776665 35799999999999999997 67999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCC
Q 000524 1024 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1024 EPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~ 1084 (1444)
|||+|||+.++..+.+.|++++++|.|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 159 EPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 217 (248)
T PRK03695 159 EPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRR 217 (248)
T ss_pred CCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999877999999999986 58889999999985 799999875
No 454
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=3e-31 Score=342.02 Aligned_cols=123 Identities=23% Similarity=0.292 Sum_probs=98.9
Q ss_pred CCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCCCCCcCCHHHHHHHHHHHHHhh---CCCEEE
Q 000524 946 FVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLPGVSGLSTEQRKRLTIAVELVA---NPSIIF 1021 (1444)
Q Consensus 946 ~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~~~~~lSgGqrkRl~ia~~L~~---~p~ill 1021 (1444)
.+||.|.+.|...+. .. ....++++.+||... .+.. ...|||||+||+.||++|+. +|++++
T Consensus 789 ~~tv~e~~~f~~~~~---~i------~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llI 854 (924)
T TIGR00630 789 DMTVEEAYEFFEAVP---SI------SRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYI 854 (924)
T ss_pred CCcHHHHHHHHHhcc---ch------hHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEE
Confidence 356667766654331 00 124577888898652 3433 46799999999999999997 599999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe-----cCcEEEEEcCC
Q 000524 1022 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK-----RGGQEIYVGPL 1084 (1444)
Q Consensus 1022 LDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~-----~gg~~~y~G~~ 1084 (1444)
|||||+|||+.+...+++.|+++.++|.|||+++|++. ....+|+++.|. +||++++.|+.
T Consensus 855 LDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 855 LDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 99999999999999999999999888999999999985 447899999994 57999999985
No 455
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-32 Score=343.68 Aligned_cols=206 Identities=24% Similarity=0.314 Sum_probs=173.5
Q ss_pred eEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcc----cccceEEEEecCCCCCCCC
Q 000524 872 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQE----TFARISGYCEQNDIHSPFV 947 (1444)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~----~~~~~~gyv~q~~~~~~~l 947 (1444)
+.+|+|||+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.++... ..++.++|++|+...++.+
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQK--DSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 4699999999999999999999999999999999998653 489999999876421 2345689999999888899
Q ss_pred cHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCC
Q 000524 948 TVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1027 (1444)
Q Consensus 948 Tv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTs 1027 (1444)
||+|++.+..........+.+...+.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt~ 163 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPTS 163 (491)
T ss_pred CHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCC
Confidence 99999987532111111123333456889999999987776653 5799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCCc
Q 000524 1028 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLGR 1086 (1444)
Q Consensus 1028 gLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~~ 1086 (1444)
|||+.+...+.+.|++++++|+|||+++|++. ++.+.||++++|++ |+++..|+...
T Consensus 164 ~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 164 SLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 99999999999999999878999999999986 57788999999986 79999998643
No 456
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-32 Score=312.42 Aligned_cols=212 Identities=21% Similarity=0.294 Sum_probs=167.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCeecEEEECCccCCCC-----CccceEEEEcCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1444)
+.+|+|+|+.|++||+++|+|||||||||||++|+|.++ |+...+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 359999999999999999999999999999999999986 3111389999999987532 124679999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1444)
++.+||+||+.++.+..+.... .+....++++++.+||........
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 142 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVNR---------------------------------SEADEIVESSLKRVALWDEVKDRL- 142 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhHHh-
Confidence 9999999999876432110000 001123566788888854211111
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1444)
+..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|..+++.+++|++++
T Consensus 143 ~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~-~tiiivsH~~~~~~~~~d~i~~ 219 (252)
T PRK14256 143 KSNAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--K-YTIIIVTHNMQQAARVSDYTAF 219 (252)
T ss_pred hCCcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--C-CcEEEEECCHHHHHhhCCEEEE
Confidence 123557999999999999999999999999999999999999999999999853 3 4556677888889999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000524 398 LSDGQIVYQGPRELVL 413 (1444)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1444)
|++|+++..|+.+++.
T Consensus 220 l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 220 FYMGDLVECGETKKIF 235 (252)
T ss_pred EECCEEEEeCCHHHHH
Confidence 9999999999988763
No 457
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-32 Score=312.69 Aligned_cols=210 Identities=20% Similarity=0.332 Sum_probs=164.9
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCeecEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNHI 238 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1444)
.+|+|+|+.+++||+++|+|||||||||||++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 58999999999999999999999999999999999853 4222389999999987431 1245799999998877
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+ +||+||+.++....+.... + .....++.+++.+|+.....+.. +
T Consensus 99 ~-~tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKDK-Q--------------------------------VLDEAVEKSLKGASIWDEVKDRL-H 143 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCcH-H--------------------------------HHHHHHHHHHHHcCCchhHHHHH-h
Confidence 7 8999999986543211000 0 01123455677777743211111 2
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
..++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++.+ + ++|+.++|+.+++.+.+|+|++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~~sH~~~~~~~~~d~i~~l 220 (252)
T PRK14239 144 DSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--D-YTMLLVTRSMQQASRISDRTGFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--C-CeEEEEECCHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 45556778888899999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 221 LDGDLIEYNDTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988764
No 458
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=2.9e-32 Score=310.59 Aligned_cols=219 Identities=26% Similarity=0.302 Sum_probs=170.6
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.++ ++.+|+|+|+.|++|++++|+|+||||||||+++|+|.....+.+|+|.++|.+..
T Consensus 2 i~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~ 68 (248)
T PRK09580 2 LSIKDLHVSVE-------------DKAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLL 68 (248)
T ss_pred eEEEEEEEEeC-------------CeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccc
Confidence 56788877763 23599999999999999999999999999999999997421145899999998764
Q ss_pred cc----cccceEEEEecCCCCCCCCcHHHHHHHHH-HhcC--C-CCCCHHHHHHHHHHHHHHcCCc-ccccccccCCCCC
Q 000524 927 QE----TFARISGYCEQNDIHSPFVTVYESLLYSA-WLRL--P-PEVDSETRKMFIEEVMELVELK-PLIQSLVGLPGVS 997 (1444)
Q Consensus 927 ~~----~~~~~~gyv~q~~~~~~~lTv~e~l~f~a-~lr~--~-~~~~~~~~~~~v~~~l~~l~L~-~~~~~~vg~~~~~ 997 (1444)
.. ..++.++|++|++.+++.+|+.+++.+.. .++. . .........+.++++++.+++. +..+..+ .+
T Consensus 69 ~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~ 144 (248)
T PRK09580 69 ELSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NV 144 (248)
T ss_pred cCCHHHHhhcceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CC
Confidence 31 12346899999998888888777654321 1110 0 0111222345678899999995 3444432 13
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHh-cceEEEEecCc
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDA-FDELFLMKRGG 1076 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~-fD~v~ll~~gg 1076 (1444)
.||||||||++|||+|+.+|+||+|||||+|||+.+...+.+.|+++.+.|+|||+++|++. .+... +|++++|++ |
T Consensus 145 ~LS~G~~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~-~~~~~~~d~i~~l~~-g 222 (248)
T PRK09580 145 GFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQR-ILDYIKPDYVHVLYQ-G 222 (248)
T ss_pred CCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHhhhCCEEEEEEC-C
Confidence 69999999999999999999999999999999999999999999999877899999999986 35454 899999985 7
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
++++.|+.
T Consensus 223 ~i~~~g~~ 230 (248)
T PRK09580 223 RIVKSGDF 230 (248)
T ss_pred eEEEeCCH
Confidence 99999875
No 459
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=1.1e-32 Score=300.76 Aligned_cols=178 Identities=26% Similarity=0.327 Sum_probs=150.2
Q ss_pred eEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc-----ccccceEEEEecCCC-CCC
Q 000524 872 LVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ-----ETFARISGYCEQNDI-HSP 945 (1444)
Q Consensus 872 ~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~-----~~~~~~~gyv~q~~~-~~~ 945 (1444)
+.+|+|+|++|++||+++|+||||||||||+++|+|...+ .+|+|.++|.+... ..+++.++|++|++. ...
T Consensus 5 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 82 (190)
T TIGR01166 5 PEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLRP--QSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQLF 82 (190)
T ss_pred cceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceeEEECCEEccccccchHHHHhhEEEEecChhhccc
Confidence 4699999999999999999999999999999999998653 48999999987531 123567899999973 233
Q ss_pred CCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCC
Q 000524 946 FVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEP 1025 (1444)
Q Consensus 946 ~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEP 1025 (1444)
..||+||+.+..... ..+.+...+.++++++.++|.+..++.+ ..||||||||++|||+|+.+|++|+||||
T Consensus 83 ~~tv~~nl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP 154 (190)
T TIGR01166 83 AADVDQDVAFGPLNL---GLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDEP 154 (190)
T ss_pred cccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 479999998865432 1233344456889999999988777763 57999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCC
Q 000524 1026 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPG 1059 (1444)
Q Consensus 1026 TsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps 1059 (1444)
|+|||+.+...+.+.|+++.++|+|||+++|++.
T Consensus 155 t~~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 155 TAGLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cccCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 9999999999999999999877999999999975
No 460
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-32 Score=311.56 Aligned_cols=220 Identities=21% Similarity=0.231 Sum_probs=175.4
Q ss_pred ceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCc---eEEEEEEEc
Q 000524 845 HSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGG---YITGNITIS 921 (1444)
Q Consensus 845 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~---~~~G~i~i~ 921 (1444)
..+.++|+++.++ ++.+|+|+|+++++||+++|+|+||||||||+++|+|...+. +.+|+|.++
T Consensus 15 ~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~ 81 (265)
T PRK14252 15 QKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILH 81 (265)
T ss_pred ceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEc
Confidence 3588999988774 236999999999999999999999999999999999976421 258999999
Q ss_pred CccCC----c---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCC
Q 000524 922 GYPKK----Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLP 994 (1444)
Q Consensus 922 g~~~~----~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~ 994 (1444)
|.+.. . ..+++.++|++|++.+++. |++||+.+...... .......++.++++++.+++.+....... .
T Consensus 82 g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~--~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~ 157 (265)
T PRK14252 82 PDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRG--VKRRSILEERVENALRNAALWDEVKDRLG-D 157 (265)
T ss_pred CccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcC--CChHHHHHHHHHHHHHHcCCchhhhHHHh-C
Confidence 87642 1 1345678999999988885 99999987643321 11112224457888888887531111111 1
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEec
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKR 1074 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~ 1074 (1444)
....||||||||++|||+|+.+|++|+|||||+|||+.+...+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++
T Consensus 158 ~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~~l~~ 235 (265)
T PRK14252 158 LAFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTAYMYM 235 (265)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEEEEEC
Confidence 2457999999999999999999999999999999999999999999999865 699999999986 57789999999985
Q ss_pred CcEEEEEcCC
Q 000524 1075 GGQEIYVGPL 1084 (1444)
Q Consensus 1075 gg~~~y~G~~ 1084 (1444)
|+++..|+.
T Consensus 236 -G~i~~~g~~ 244 (265)
T PRK14252 236 -GELIEFGAT 244 (265)
T ss_pred -CEEEEeCCH
Confidence 899999875
No 461
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.4e-32 Score=311.95 Aligned_cols=206 Identities=24% Similarity=0.281 Sum_probs=165.7
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC-CeecEEEECCccCCCCCc-cceEEEEcCCCC--CCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL-KVSGRVTYNGHDMGEFVP-ERTAAYISQHDN--HIGEM 241 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~-~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~l 241 (1444)
++|+|+|+.+++|++++|+||||||||||+++|+|.++|.. ..+|+|.++|+++..... ++.++||+|++. +.+.+
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 48999999999999999999999999999999999998810 028999999998764322 257999999974 44667
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcc---cccccccC
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEV---CADTMVGD 318 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~---~~dt~vg~ 318 (1444)
|+.+++.+.++..+.. . ....++.+++.+||.+ ..++
T Consensus 97 ~~~~~~~~~~~~~~~~-~-----------------------------------~~~~~~~~l~~~~l~~~~~~~~~---- 136 (254)
T PRK10418 97 TMHTHARETCLALGKP-A-----------------------------------DDATLTAALEAVGLENAARVLKL---- 136 (254)
T ss_pred cHHHHHHHHHHHcCCC-h-----------------------------------HHHHHHHHHHHcCCCChhhhhhc----
Confidence 9999987643321100 0 0123466788999975 2333
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
..+.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++.. +++|+.++|..+++.+.+|++++|
T Consensus 137 -~~~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~-g~til~~sH~~~~~~~~~d~v~~l 214 (254)
T PRK10418 137 -YPFEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKR-ALGMLLVTHDMGVVARLADDVAVM 214 (254)
T ss_pred -CCcccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhc-CcEEEEEecCHHHHHHhCCEEEEE
Confidence 345799999999999999999999999999999999999999999999986533 445666778888888999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 215 SHGRIVEQGDVETLF 229 (254)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999988764
No 462
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-32 Score=313.96 Aligned_cols=210 Identities=19% Similarity=0.306 Sum_probs=165.1
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCeecEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNHI 238 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1444)
.+|+|+|+.|++||+++|+|||||||||||++|+|.++ |+...+|+|.++|+++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 58999999999999999999999999999999999986 3222489999999987531 1245799999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+. ||+||+.|..+..+.... .+...+++.+++.+||.+...... +
T Consensus 106 ~~-tv~enl~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~ 150 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKNK---------------------------------KKLQEIVEKSLKDVALWDEVKDRL-H 150 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhhhhh-h
Confidence 75 999999886433211000 001123456677888753211111 2
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
...+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++. .++ +++.++|+.+++.+.+|++++|
T Consensus 151 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~~-tiiivtH~~~~~~~~~d~i~~l 227 (259)
T PRK14274 151 TQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLK--EKY-TIVIVTHNMQQAARVSDQTAFF 227 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--cCC-EEEEEEcCHHHHHHhCCEEEEE
Confidence 3455799999999999999999999999999999999999999999999874 244 4555777788889999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|+++.+|+++++.
T Consensus 228 ~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 228 YMGELVECNDTNKMF 242 (259)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999988764
No 463
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.2e-33 Score=324.68 Aligned_cols=211 Identities=24% Similarity=0.367 Sum_probs=178.5
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|++++++.+ ..++|+|+|+++++||++||+|+||||||||++.|+|... +.+|+|++||.++
T Consensus 336 ~l~~~~vsF~y~~~-----------~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPGQ-----------QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCCC-----------ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 68999999999743 3469999999999999999999999999999999999765 4589999999886
Q ss_pred Cc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccc-------cccCCC
Q 000524 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQS-------LVGLPG 995 (1444)
Q Consensus 926 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~-------~vg~~~ 995 (1444)
.. ...++.++.++|...++ .-|+++||..+. | +.+ ++.++++++.+||++.... .+|. +
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF-~~Tlr~NL~lA~----~-~As----DEel~~aL~qvgL~~l~~~~p~gl~t~lge-~ 471 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLF-SGTLRDNLRLAN----P-DAS----DEELWAALQQVGLEKLLESAPDGLNTWLGE-G 471 (573)
T ss_pred hhCChhhHHHHHhhhccchHHH-HHHHHHHHhhcC----C-CCC----HHHHHHHHHHcCHHHHHHhChhhhhchhcc-C
Confidence 43 33566788899987665 469999997642 2 222 3448899999999876544 4554 4
Q ss_pred CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecC
Q 000524 996 VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRG 1075 (1444)
Q Consensus 996 ~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~g 1075 (1444)
.+.||||||||++|||+|++|.++++|||||.|||+.|+++|++.|.+-++ |+|+|++||+.. -.+.||+|++|++
T Consensus 472 G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~- 547 (573)
T COG4987 472 GRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN- 547 (573)
T ss_pred CCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-
Confidence 578999999999999999999999999999999999999999999988764 899999999975 4688999999985
Q ss_pred cEEEEEcCC
Q 000524 1076 GQEIYVGPL 1084 (1444)
Q Consensus 1076 g~~~y~G~~ 1084 (1444)
|+++..|..
T Consensus 548 Gkiie~G~~ 556 (573)
T COG4987 548 GKIIEEGTH 556 (573)
T ss_pred CeeeecCCH
Confidence 899999975
No 464
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=9.2e-33 Score=308.81 Aligned_cols=209 Identities=25% Similarity=0.411 Sum_probs=168.1
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|+++.+.. ..+.+|+|+|+.+++|++++|+||||||||||+++|+|...+ .+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~~-----------~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~~~ 69 (220)
T cd03245 3 IEFRNVSFSYPN-----------QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKP--TSGSVLLDGTDIR 69 (220)
T ss_pred EEEEEEEEEcCC-----------CCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCeEEECCEEhH
Confidence 667888776531 123599999999999999999999999999999999998653 4799999998753
Q ss_pred c---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccccc------CCCCC
Q 000524 927 Q---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVG------LPGVS 997 (1444)
Q Consensus 927 ~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg------~~~~~ 997 (1444)
. ...++.++|++|++..++ .|+.|++.+... ... ...+.++++.+++.+..+..+. .....
T Consensus 70 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~-----~~~----~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~ 139 (220)
T cd03245 70 QLDPADLRRNIGYVPQDVTLFY-GTLRDNITLGAP-----LAD----DERILRAAELAGVTDFVNKHPNGLDLQIGERGR 139 (220)
T ss_pred HCCHHHHHhhEEEeCCCCcccc-chHHHHhhcCCC-----CCC----HHHHHHHHHHcCcHHHHHhccccccceecCCCc
Confidence 2 223567899999988776 699999876421 111 2235678888999877665431 11245
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ +|||+++|++. ..+.+|++++|++ |+
T Consensus 140 ~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~--~~~~~d~v~~l~~-g~ 215 (220)
T cd03245 140 GLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLGD-KTLIIITHRPS--LLDLVDRIIVMDS-GR 215 (220)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcCC-CEEEEEeCCHH--HHHhCCEEEEEeC-Ce
Confidence 89999999999999999999999999999999999999999999998764 89999999986 3479999999986 78
Q ss_pred EEEEc
Q 000524 1078 EIYVG 1082 (1444)
Q Consensus 1078 ~~y~G 1082 (1444)
+++.|
T Consensus 216 i~~~~ 220 (220)
T cd03245 216 IVADG 220 (220)
T ss_pred EeecC
Confidence 77654
No 465
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-32 Score=314.70 Aligned_cols=209 Identities=21% Similarity=0.323 Sum_probs=162.7
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCeecEEEECCccCCCC-----CccceEEEEcCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1444)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.+++. ...+|+|.++|+++... ..++.++|++|++.+
T Consensus 26 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 105 (269)
T PRK14259 26 FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNP 105 (269)
T ss_pred EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCcc
Confidence 35899999999999999999999999999999999998631 01389999999886421 123569999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1444)
++ .||+||+.+++...+... + ....++.+++.+++....+...
T Consensus 106 ~~-~tv~enl~~~~~~~~~~~------~-----------------------------~~~~~~~~l~~~~l~~~l~~~~- 148 (269)
T PRK14259 106 FP-KSIYENIAFGARINGYTG------D-----------------------------MDELVERSLRKAAVWDECKDKL- 148 (269)
T ss_pred ch-hhHHHHHhhhhhhcCCcH------H-----------------------------HHHHHHHHHHHhCCcchhhhhh-
Confidence 87 599999998754322100 0 0012344566666632111111
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1444)
+..++.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ + .+|+.++|+..++.+++|++++
T Consensus 149 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~-~tiiivtH~~~~~~~~~d~i~~ 225 (269)
T PRK14259 149 NESGYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK--N-FTIVIVTHNMQQAVRVSDMTAF 225 (269)
T ss_pred CCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhcCEEEE
Confidence 234457999999999999999999999999999999999999999999998742 4 4566678888899999999999
Q ss_pred EcC-----------CeEEEecChhhHH
Q 000524 398 LSD-----------GQIVYQGPRELVL 413 (1444)
Q Consensus 398 L~~-----------G~iv~~G~~~~~~ 413 (1444)
|++ |++++.|+.+++.
T Consensus 226 l~~~~~~~~~~g~~g~~~~~~~~~~~~ 252 (269)
T PRK14259 226 FNAEEVEGGSGGKVGYLVEFNETKKIF 252 (269)
T ss_pred EeccccccccccccceEEEeCCHHHHH
Confidence 996 6789999998874
No 466
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=1.8e-32 Score=301.22 Aligned_cols=194 Identities=24% Similarity=0.275 Sum_probs=160.5
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
.++|+++.++ .+.+|+|+|+.+++||+++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (198)
T TIGR01189 2 AARNLACSRG-------------ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRP--DSGEVRWNGTALAE 66 (198)
T ss_pred EEEEEEEEEC-------------CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CccEEEECCEEccc
Confidence 4567766653 34699999999999999999999999999999999997653 48999999987543
Q ss_pred --ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHH
Q 000524 928 --ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRK 1005 (1444)
Q Consensus 928 --~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrk 1005 (1444)
..+++.++|++|++.+++.+|+.|++.+....+. . + ++.++++++.+++.+..++.+ ..|||||||
T Consensus 67 ~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~----~-~--~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~q 134 (198)
T TIGR01189 67 QRDEPHRNILYLGHLPGLKPELSALENLHFWAAIHG----G-A--QRTIEDALAAVGLTGFEDLPA-----AQLSAGQQR 134 (198)
T ss_pred chHHhhhheEEeccCcccccCCcHHHHHHHHHHHcC----C-c--HHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHH
Confidence 2245678999999888888999999987644331 1 1 234788999999988777654 579999999
Q ss_pred HHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEE
Q 000524 1006 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFL 1071 (1444)
Q Consensus 1006 Rl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~l 1071 (1444)
|++||++++.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++.. ..+|+++.
T Consensus 135 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~---~~~~~~~~ 197 (198)
T TIGR01189 135 RLALARLWLSRAPLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLG---LVEARELR 197 (198)
T ss_pred HHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEccccc---ccceEEee
Confidence 9999999999999999999999999999999999999987789999999999852 23466553
No 467
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.7e-32 Score=303.28 Aligned_cols=197 Identities=28% Similarity=0.373 Sum_probs=164.0
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCC
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKK 926 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~ 926 (1444)
+.++|++..++ ++.+|+|+|++|++||++||+|+||||||||+++|+|... +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (207)
T PRK13539 3 LEGEDLACVRG-------------GRVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDID 67 (207)
T ss_pred EEEEeEEEEEC-------------CeEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCc
Confidence 56788876653 2469999999999999999999999999999999999765 34799999998753
Q ss_pred cccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHH
Q 000524 927 QETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKR 1006 (1444)
Q Consensus 927 ~~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkR 1006 (1444)
...+++.++|++|++.+++.+||.|++.+....+. .. ++.++++++.++|.+..+..+ +.||||||||
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~tv~~~l~~~~~~~~---~~----~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 135 (207)
T PRK13539 68 DPDVAEACHYLGHRNAMKPALTVAENLEFWAAFLG---GE----ELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRR 135 (207)
T ss_pred chhhHhhcEEecCCCcCCCCCcHHHHHHHHHHhcC---Cc----HHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHH
Confidence 22255678999999888889999999987543321 11 124789999999987666553 5799999999
Q ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe
Q 000524 1007 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1073 (1444)
Q Consensus 1007 l~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~ 1073 (1444)
++||++|+.+|++|+|||||+|||+.+...+++.|++++++|+|||+++|++. ++. . |+++.+.
T Consensus 136 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~-~-~~~~~~~ 199 (207)
T PRK13539 136 VALARLLVSNRPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPL-GLP-G-ARELDLG 199 (207)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCch-hhc-c-CcEEeec
Confidence 99999999999999999999999999999999999998878999999999985 344 3 8887774
No 468
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=2.5e-32 Score=298.62 Aligned_cols=170 Identities=41% Similarity=0.670 Sum_probs=148.0
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCC--CCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKL--DSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l--~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1444)
+++|+|+|+.+++|++++|+||||||||||+++|+|.+ +|. +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 45999999999999999999999999999999999999 887 9999999998765334567999999998899999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
++||+.+..++ .
T Consensus 99 ~~~~i~~~~~~--------------------------------------------------------------------~ 110 (194)
T cd03213 99 VRETLMFAAKL--------------------------------------------------------------------R 110 (194)
T ss_pred HHHHHHHHHHh--------------------------------------------------------------------c
Confidence 99999763210 0
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCc-hhHHhhcCeEEEEcCC
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPA-PETYDLFDDIILLSDG 401 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~-~~~~~~fD~vilL~~G 401 (1444)
.||||||||++||++|+.+|++++|||||+|||..++..+.+.|+++.. .+.|+|+ ++|.. .++.+.+|++++|++|
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii-~sh~~~~~~~~~~d~v~~l~~G 188 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLAD-TGRTIIC-SIHQPSSEIFELFDKLLLLSQG 188 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEE-EecCchHHHHHhcCEEEEEeCC
Confidence 4999999999999999999999999999999999999999999998754 3556555 55554 4788899999999999
Q ss_pred eEEEec
Q 000524 402 QIVYQG 407 (1444)
Q Consensus 402 ~iv~~G 407 (1444)
++++.|
T Consensus 189 ~i~~~~ 194 (194)
T cd03213 189 RVIYFG 194 (194)
T ss_pred EEEecC
Confidence 998765
No 469
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.1e-32 Score=275.64 Aligned_cols=202 Identities=29% Similarity=0.390 Sum_probs=170.5
Q ss_pred CccccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc-------cceEEEEc
Q 000524 160 SRKKHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP-------ERTAAYIS 232 (1444)
Q Consensus 160 ~~~~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~ 232 (1444)
+...+.+||++|++.|++||.++|+|||||||||||-+|+|+-.|+ +|+|.+.|+++..+.. .+.+|+|+
T Consensus 18 ~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVF 94 (228)
T COG4181 18 QGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVF 94 (228)
T ss_pred CCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEE
Confidence 3445688999999999999999999999999999999999999998 9999999999876542 36899999
Q ss_pred CCCCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccc
Q 000524 233 QHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCA 312 (1444)
Q Consensus 233 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~ 312 (1444)
|.-.++|+||..||+...+.+++-..+ +........|+.+||.+-.
T Consensus 95 QSF~Lip~ltAlENV~lPleL~ge~~~----------------------------------~~~~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 95 QSFHLIPNLTALENVALPLELRGESSA----------------------------------DSRAGAKALLEAVGLGKRL 140 (228)
T ss_pred EeeeccccchhhhhccchhhhcCCccc----------------------------------cHHHHHHHHHHHhCccccc
Confidence 999999999999999998877652211 0112345678999998766
Q ss_pred cccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhc
Q 000524 313 DTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLF 392 (1444)
Q Consensus 313 dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~f 392 (1444)
+- .+.+|||||+|||+||||+...|+|||-||||-.||..|..+|.+.|-.+.+.. +++++.++|+ +....-|
T Consensus 141 ~H-----yP~qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~-G~TlVlVTHD-~~LA~Rc 213 (228)
T COG4181 141 TH-----YPAQLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRER-GTTLVLVTHD-PQLAARC 213 (228)
T ss_pred cc-----CccccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhc-CceEEEEeCC-HHHHHhh
Confidence 54 345799999999999999999999999999999999999999999998887654 5555556665 4577889
Q ss_pred CeEEEEcCCeEEE
Q 000524 393 DDIILLSDGQIVY 405 (1444)
Q Consensus 393 D~vilL~~G~iv~ 405 (1444)
||++-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999974
No 470
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=6.4e-33 Score=292.91 Aligned_cols=209 Identities=22% Similarity=0.355 Sum_probs=184.3
Q ss_pred ccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCC
Q 000524 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1444)
.++++++|+||.++||+|++++|||||||||.+++|+|.++|+ +|+|+++|.+++... +.+|||+|.+--+++.+|
T Consensus 13 g~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle~~---~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~t 88 (300)
T COG4152 13 GDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLEPT---EGEITWNGGPLSQEI-KNRIGYLPEERGLYPKMT 88 (300)
T ss_pred CceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCCcc---CceEEEcCcchhhhh-hhhcccChhhhccCccCc
Confidence 4578999999999999999999999999999999999999998 999999999887543 356999999999999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|.|.|.|-++++|+... +.....+++|+.+++....... +.
T Consensus 89 v~dql~yla~LkGm~~~----------------------------------e~~~~~~~wLer~~i~~~~~~k-----Ik 129 (300)
T COG4152 89 VEDQLKYLAELKGMPKA----------------------------------EIQKKLQAWLERLEIVGKKTKK-----IK 129 (300)
T ss_pred HHHHHHHHHHhcCCcHH----------------------------------HHHHHHHHHHHhccccccccch-----HH
Confidence 99999999999986421 1233467899999998766544 45
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
.||-|.+|++-+-.+++++|++++||||+|||||-.+..+-+.+.++.. .+++|+..+|.++.+.++||+|++|++|+
T Consensus 130 ~LSKGnqQKIQfisaviHePeLlILDEPFSGLDPVN~elLk~~I~~lk~--~GatIifSsH~Me~vEeLCD~llmL~kG~ 207 (300)
T COG4152 130 ELSKGNQQKIQFISAVIHEPELLILDEPFSGLDPVNVELLKDAIFELKE--EGATIIFSSHRMEHVEELCDRLLMLKKGQ 207 (300)
T ss_pred HhhhhhhHHHHHHHHHhcCCCEEEecCCccCCChhhHHHHHHHHHHHHh--cCCEEEEecchHHHHHHHhhhhheecCCc
Confidence 7999999999999999999999999999999999999999999998864 35566667888999999999999999999
Q ss_pred EEEecChhhHHHHH
Q 000524 403 IVYQGPRELVLEFF 416 (1444)
Q Consensus 403 iv~~G~~~~~~~~F 416 (1444)
.|.+|+.+++..-|
T Consensus 208 ~V~~G~v~~ir~~~ 221 (300)
T COG4152 208 TVLYGTVEDIRRSF 221 (300)
T ss_pred eEEeccHHHHHHhc
Confidence 99999999998744
No 471
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-32 Score=310.76 Aligned_cols=212 Identities=19% Similarity=0.273 Sum_probs=167.1
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC---ccceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV---PERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~l 241 (1444)
+.+|+|+|+.+++|++++|+||||||||||+++|+|.++|....+|+|+++|+++.+.. .++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 35899999999999999999999999999999999997531113899999999886542 2457999999988887 6
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMI 321 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~ 321 (1444)
||+||+.++.+.++.... . ......++.+++.+||........ +...
T Consensus 94 tv~eni~~~~~~~~~~~~-------------------~-------------~~~~~~~~~~l~~~~l~~~~~~~~-~~~~ 140 (246)
T PRK14269 94 SIYENISYAPKLHGMIKN-------------------K-------------DEEEALVVDCLQKVGLFEEVKDKL-KQNA 140 (246)
T ss_pred cHHHHhhhHHhhcCcccC-------------------h-------------HHHHHHHHHHHHHcCCChhhhHHh-cCCc
Confidence 999999986533211000 0 001123466788889853211111 2345
Q ss_pred cccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCC
Q 000524 322 RGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDG 401 (1444)
Q Consensus 322 ~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G 401 (1444)
+.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. .+ ++|+.++|+.+++.+.+|+|++|++|
T Consensus 141 ~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~--~~-~tiii~tH~~~~~~~~~d~i~~l~~G 217 (246)
T PRK14269 141 LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELS--HN-LSMIMVTHNMQQGKRVADYTAFFHLG 217 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHh--CC-CEEEEEecCHHHHHhhCcEEEEEECC
Confidence 6799999999999999999999999999999999999999999999874 24 45666778888899999999999999
Q ss_pred eEEEecChhhHH
Q 000524 402 QIVYQGPRELVL 413 (1444)
Q Consensus 402 ~iv~~G~~~~~~ 413 (1444)
++++.|+.+++.
T Consensus 218 ~i~~~g~~~~~~ 229 (246)
T PRK14269 218 ELIEFGESKEFF 229 (246)
T ss_pred EEEEECCHHHHH
Confidence 999999988764
No 472
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=8.3e-33 Score=377.06 Aligned_cols=213 Identities=23% Similarity=0.335 Sum_probs=168.4
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC---------------------------------------
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--------------------------------------- 205 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~--------------------------------------- 205 (1444)
.++|+|+|+.|+||+.+||+||||||||||+++|+|.++|.
T Consensus 1181 ~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 (1466)
T PTZ00265 1181 VPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSL 1260 (1466)
T ss_pred CccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999999981
Q ss_pred ------------CCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHh
Q 000524 206 ------------LKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMTVRETLAFSARCQGVGSRYELLTELARRE 270 (1444)
Q Consensus 206 ------------~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e 270 (1444)
...+|+|++||+++.+... ++.++||+|++.+| +.||+|||.++..
T Consensus 1261 ~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIreNI~~g~~------------------ 1321 (1466)
T PTZ00265 1261 TKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIYENIKFGKE------------------ 1321 (1466)
T ss_pred ccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHHHHHhcCCC------------------
Confidence 0138999999999987754 57899999998777 5799999998631
Q ss_pred hhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccccchhhhhHHHHHHHHhcCCccceeecC
Q 000524 271 NEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEI 350 (1444)
Q Consensus 271 ~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEp 350 (1444)
+.+.++..+|+...+ .++. +-.|++..||.||+.+. .||||||||++|||||+++|+||+||||
T Consensus 1322 -------~at~eeI~~A~k~A~------l~~f--I~~LP~GydT~VGe~G~-~LSGGQkQRIaIARALlr~p~ILLLDEa 1385 (1466)
T PTZ00265 1322 -------DATREDVKRACKFAA------IDEF--IESLPNKYDTNVGPYGK-SLSGGQKQRIAIARALLREPKILLLDEA 1385 (1466)
T ss_pred -------CCCHHHHHHHHHHcC------CHHH--HHhCccccCCccCCCCC-cCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 001111111111111 1111 22588899999997654 6999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcC----CeEE-EecChhhHHH
Q 000524 351 STGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSD----GQIV-YQGPRELVLE 414 (1444)
Q Consensus 351 tsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~----G~iv-~~G~~~~~~~ 414 (1444)
||+||+.+...|.+.|+++....++|+|+ +.|.. ++.+.+|+|++|++ |+++ ++|+++++++
T Consensus 1386 TSaLD~~sE~~I~~~L~~~~~~~~~TvIi-IaHRl-sti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1386 TSSLDSNSEKLIEKTIVDIKDKADKTIIT-IAHRI-ASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred ccccCHHHHHHHHHHHHHHhccCCCEEEE-EechH-HHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 99999999999999999864223556666 55544 56678999999999 9955 8999999863
No 473
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-33 Score=312.92 Aligned_cols=209 Identities=25% Similarity=0.340 Sum_probs=163.0
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
+++|+++.++. .++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~~-----------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p--~~G~i~~~g~~~~~ 68 (234)
T cd03251 2 EFKNVTFRYPG-----------DGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDV--DSGRILIDGHDVRD 68 (234)
T ss_pred EEEEEEEEeCC-----------CCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccC--CCCEEEECCEEhhh
Confidence 56777766531 113589999999999999999999999999999999998653 48999999976532
Q ss_pred ---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHH-----HHHHHHHHHc--CCcccccccccCCCCC
Q 000524 928 ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRK-----MFIEEVMELV--ELKPLIQSLVGLPGVS 997 (1444)
Q Consensus 928 ---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~-----~~v~~~l~~l--~L~~~~~~~vg~~~~~ 997 (1444)
...++.++|++|++.+++ .||+||+.+.... ....... ..+++.++.+ ++.+..+.. +.
T Consensus 69 ~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-----~~ 137 (234)
T cd03251 69 YTLASLRRQIGLVSQDVFLFN-DTVAENIAYGRPG-----ATREEVEEAARAANAHEFIMELPEGYDTVIGER-----GV 137 (234)
T ss_pred CCHHHHHhhEEEeCCCCeecc-ccHHHHhhccCCC-----CCHHHHHHHHHHcCcHHHHHhcccCcceeeccC-----CC
Confidence 234567899999988776 6999999764321 1111100 1133444444 444443332 46
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||+|||||++||++|+.+|++|+|||||+|||+.+...+.+.|+++. +|+|||+++|++. ++ ..||++++|++ |+
T Consensus 138 ~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~v~~l~~-G~ 213 (234)
T cd03251 138 KLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLVQAALERLM-KNRTTFVIAHRLS-TI-ENADRIVVLED-GK 213 (234)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEecC-Ce
Confidence 799999999999999999999999999999999999999999999986 4899999999986 45 45999999986 78
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
+++.|+.
T Consensus 214 i~~~~~~ 220 (234)
T cd03251 214 IVERGTH 220 (234)
T ss_pred EeeeCCH
Confidence 8888764
No 474
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-32 Score=311.88 Aligned_cols=212 Identities=20% Similarity=0.306 Sum_probs=166.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCeecEEEECCccCCCCC-----ccceEEEEcCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEFV-----PERTAAYISQHDNH 237 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 237 (1444)
+++|+|+|+.+++|++++|+||||||||||+++|+|..+ |....+|+|+++|+++.+.. .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999976 21123899999998865321 24579999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1444)
++. ||+||+.+.....+..... .+.+..++.+++.+||.+...+.+
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~~--------------------------------~~~~~~~~~~l~~~~l~~~~~~~~- 143 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKNK--------------------------------KKLDEIVEKSLTSVGLWEELGDRL- 143 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCCH--------------------------------HHHHHHHHHHHHHcCCCchhhhHh-
Confidence 875 9999998864322110000 001123566788899865322222
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1444)
+...+.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|+++. .+ .+|+.++|...++.+.+|+|++
T Consensus 144 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~--~~-~tiiiisH~~~~~~~~~d~i~~ 220 (251)
T PRK14244 144 KDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELK--KN-FTIIVVTHSMKQAKKVSDRVAF 220 (251)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHhhcCEEEE
Confidence 23456799999999999999999999999999999999999999999999874 24 4555577888888999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000524 398 LSDGQIVYQGPRELVL 413 (1444)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1444)
|++|++++.|+.+++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999987764
No 475
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-32 Score=310.89 Aligned_cols=211 Identities=21% Similarity=0.345 Sum_probs=165.9
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCeecEEEECCccCCCC-----CccceEEEEcCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDS--SLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1444)
..+|+|+|+.+++||+++|+|||||||||||++|+|.++| ....+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 3589999999999999999999999999999999999874 111389999999887532 124679999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1444)
++ +||+||+.++....+.... + ..+..+++.++.+|+....+.. .
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~~~-----~----------------------------~~~~~~~~~l~~~~l~~~~~~~-~ 140 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVKSK-----H----------------------------KLDRIVEESLKKAALWDEVKSE-L 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH-----H----------------------------HHHHHHHHHHHHcCCCchhHHH-H
Confidence 77 8999999986532211000 0 0112245567777775321111 2
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1444)
+..++.||||||||++||+||+.+|++++|||||+|||..+...+.+.|+++.. + ++|+.++|+.+++.+++|+|++
T Consensus 141 ~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tili~sH~~~~~~~~~d~i~~ 217 (250)
T PRK14262 141 NKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--N-YTIVIVTHNIGQAIRIADYIAF 217 (250)
T ss_pred hCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--C-cEEEEEeCCHHHHHHhCCEEEE
Confidence 344568999999999999999999999999999999999999999999998753 4 4555577878888999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000524 398 LSDGQIVYQGPRELVL 413 (1444)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1444)
|++|+++..|+.+++.
T Consensus 218 l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 218 MYRGELIEYGPTREIV 233 (250)
T ss_pred EECCEEEEecCHHHHH
Confidence 9999999999988764
No 476
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-32 Score=296.29 Aligned_cols=170 Identities=28% Similarity=0.414 Sum_probs=148.8
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
+++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|...+ .+|+|.++|.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~ 66 (178)
T cd03229 2 ELKNVSKRYG-------------QKTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEP--DSGSILIDGEDLTD 66 (178)
T ss_pred EEEEEEEEEC-------------CeEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccc
Confidence 4677776653 24699999999999999999999999999999999997653 48999999987542
Q ss_pred -----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHH
Q 000524 928 -----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTE 1002 (1444)
Q Consensus 928 -----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgG 1002 (1444)
..+++.++|++|++..++..|++|++.+. ||||
T Consensus 67 ~~~~~~~~~~~i~~~~q~~~~~~~~t~~~~l~~~------------------------------------------lS~G 104 (178)
T cd03229 67 LEDELPPLRRRIGMVFQDFALFPHLTVLENIALG------------------------------------------LSGG 104 (178)
T ss_pred cchhHHHHhhcEEEEecCCccCCCCCHHHheeec------------------------------------------CCHH
Confidence 23456799999999888889999987532 8999
Q ss_pred HHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhC-CCEEEEEecCCCHHHHHhcceEEEEecC
Q 000524 1003 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPGIDIFDAFDELFLMKRG 1075 (1444)
Q Consensus 1003 qrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~-g~tvi~t~Hqps~~i~~~fD~v~ll~~g 1075 (1444)
||||++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |+|+|+++|++. ++.+.+|++++|++|
T Consensus 105 ~~qr~~la~al~~~p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 105 QQQRVALARALAMDPDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 999999999999999999999999999999999999999999877 899999999985 576789999999864
No 477
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=8e-33 Score=313.08 Aligned_cols=210 Identities=29% Similarity=0.419 Sum_probs=162.4
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
+++|+++.++.. +++.+|+|+||++++||+++|+|+||||||||+++|+|... +.+|+|.++|.+...
T Consensus 2 ~i~~l~~~~~~~----------~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~ 69 (238)
T cd03249 2 EFKNVSFRYPSR----------PDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRD 69 (238)
T ss_pred eEEEEEEecCCC----------CCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhh
Confidence 467777665310 12359999999999999999999999999999999999865 348999999987532
Q ss_pred ---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccccccc-------ccCCCCC
Q 000524 928 ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSL-------VGLPGVS 997 (1444)
Q Consensus 928 ---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~-------vg~~~~~ 997 (1444)
...++.++|++|++.+++ .||+|++.+....+ ..+ .+++.++..++.+..+.+ .. ....
T Consensus 70 ~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~ 138 (238)
T cd03249 70 LNLRWLRSQIGLVSQEPVLFD-GTIAENIRYGKPDA-----TDE----EVEEAAKKANIHDFIMSLPDGYDTLVG-ERGS 138 (238)
T ss_pred cCHHHHHhhEEEECCchhhhh-hhHHHHhhccCCCC-----CHH----HHHHHHHHcChHHHHHhhccccceeec-cCCc
Confidence 223456999999987776 69999997642111 111 123334444443322221 11 1246
Q ss_pred cCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcE
Q 000524 998 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQ 1077 (1444)
Q Consensus 998 ~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~ 1077 (1444)
.||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++. +|+|||+++|++. ++ +.||++++|++ |+
T Consensus 139 ~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~-~g~~vi~~sh~~~-~~-~~~d~v~~l~~-G~ 214 (238)
T cd03249 139 QLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM-KGRTTIVIAHRLS-TI-RNADLIAVLQN-GQ 214 (238)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEeCCHH-HH-hhCCEEEEEEC-CE
Confidence 899999999999999999999999999999999999999999999986 7899999999986 45 48999999986 78
Q ss_pred EEEEcCC
Q 000524 1078 EIYVGPL 1084 (1444)
Q Consensus 1078 ~~y~G~~ 1084 (1444)
+++.|+.
T Consensus 215 i~~~~~~ 221 (238)
T cd03249 215 VVEQGTH 221 (238)
T ss_pred EEEeCCH
Confidence 9998874
No 478
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=6.6e-33 Score=361.03 Aligned_cols=207 Identities=26% Similarity=0.364 Sum_probs=166.1
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1444)
++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|++||+++.+... ++.++||+|++.+|+ .|
T Consensus 488 ~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-gT 563 (708)
T TIGR01193 488 NILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFS-GS 563 (708)
T ss_pred cceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCceehh-HH
Confidence 5899999999999999999999999999999999999998 9999999999877654 578999999987775 59
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+|||.++.+- +.+.++..+++...+ .++.++ .++...||.||+.+ .
T Consensus 564 I~eNi~l~~~~------------------------~~~~~~i~~a~~~a~------l~~~i~--~lp~gldt~i~e~G-~ 610 (708)
T TIGR01193 564 ILENLLLGAKE------------------------NVSQDEIWAACEIAE------IKDDIE--NMPLGYQTELSEEG-S 610 (708)
T ss_pred HHHHHhccCCC------------------------CCCHHHHHHHHHHhC------CHHHHH--hcccccCcEecCCC-C
Confidence 99999986311 001111111111110 111222 36677899999754 5
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEcCCe
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLSDGQ 402 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~~G~ 402 (1444)
+||||||||++||||++++|++|+||||||+||+.+...+.+.|+++ .++|+|+ ++|.. ++.+.+|+|++|++|+
T Consensus 611 ~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~Ii-itHr~-~~~~~~D~i~~l~~G~ 685 (708)
T TIGR01193 611 SISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTIIF-VAHRL-SVAKQSDKIIVLDHGK 685 (708)
T ss_pred CCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEEEE-Eecch-HHHHcCCEEEEEECCE
Confidence 79999999999999999999999999999999999999999999873 3456555 55544 4568899999999999
Q ss_pred EEEecChhhHHH
Q 000524 403 IVYQGPRELVLE 414 (1444)
Q Consensus 403 iv~~G~~~~~~~ 414 (1444)
+++.|+++++++
T Consensus 686 i~~~G~~~~L~~ 697 (708)
T TIGR01193 686 IIEQGSHDELLD 697 (708)
T ss_pred EEEECCHHHHHh
Confidence 999999998865
No 479
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-31 Score=306.68 Aligned_cols=194 Identities=20% Similarity=0.292 Sum_probs=164.7
Q ss_pred CceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCcccccceEEEEecCCCCCCCCcH
Q 000524 870 DKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQETFARISGYCEQNDIHSPFVTV 949 (1444)
Q Consensus 870 ~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~~~~~~~~gyv~q~~~~~~~lTv 949 (1444)
..+.+|+++|+.++|||+++|+||||||||||+++|+|...+ .+|+|.++|. .+++.|+....+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~p--~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLSP--TVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEECCE----------EeEEecccCCCCCCcH
Confidence 446799999999999999999999999999999999998653 4799999984 3566777667778999
Q ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCC
Q 000524 950 YESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1029 (1444)
Q Consensus 950 ~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgL 1029 (1444)
.|++.+..... ....+.....++++++.+++.+..+.. ++.||||||||++||++|+.+|++|+|||||+||
T Consensus 103 ~enl~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gL 174 (264)
T PRK13546 103 IENIEFKMLCM---GFKRKEIKAMTPKIIEFSELGEFIYQP-----VKKYSSGMRAKLGFSINITVNPDILVIDEALSVG 174 (264)
T ss_pred HHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhcCC-----cccCCHHHHHHHHHHHHHhhCCCEEEEeCccccC
Confidence 99998764432 123344445677889999998877665 4579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCcEEEEEcCCC
Q 000524 1030 DARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGGQEIYVGPLG 1085 (1444)
Q Consensus 1030 D~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg~~~y~G~~~ 1085 (1444)
|+.+...+.+.|+++.+.|+|||+++|++. ++.+.+|++++|++ |++++.|+..
T Consensus 175 D~~~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~i~~~g~~~ 228 (264)
T PRK13546 175 DQTFAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GKLKDYGELD 228 (264)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CEEEEeCCHH
Confidence 999999999999999777999999999985 57788999999985 7999998863
No 480
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.4e-33 Score=311.09 Aligned_cols=211 Identities=25% Similarity=0.379 Sum_probs=167.0
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPK 925 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~ 925 (1444)
.++++|+++.++. .+.+|+|+|+++++||+++|+|||||||||||++|+|...+ .+|+|.++|.++
T Consensus 2 ~l~~~~l~~~~~~------------~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~ 67 (229)
T cd03254 2 EIEFENVNFSYDE------------KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDP--QKGQILIDGIDI 67 (229)
T ss_pred eEEEEEEEEecCC------------CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCC--CCCEEEECCEeH
Confidence 3678888877631 23589999999999999999999999999999999998653 479999999875
Q ss_pred Cc---ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccc-c-----CCCC
Q 000524 926 KQ---ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLV-G-----LPGV 996 (1444)
Q Consensus 926 ~~---~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~v-g-----~~~~ 996 (1444)
.. ..+++.++|++|++.+++. |++|++.+... ... ...+++.++.+++.+..+.+. | ...+
T Consensus 68 ~~~~~~~~~~~i~~~~q~~~~~~~-tv~~~~~~~~~-----~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 137 (229)
T cd03254 68 RDISRKSLRSMIGVVLQDTFLFSG-TIMENIRLGRP-----NAT----DEEVIEAAKEAGAHDFIMKLPNGYDTVLGENG 137 (229)
T ss_pred HHcCHHHHhhhEEEecCCchhhhh-HHHHHHhccCC-----CCC----HHHHHHHHHHhChHHHHHhCcccccCHhhcCC
Confidence 42 2345678999999887775 99999976421 111 122455566666654443321 1 1124
Q ss_pred CcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEecCc
Q 000524 997 SGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMKRGG 1076 (1444)
Q Consensus 997 ~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~~gg 1076 (1444)
..||||||||++||++|+.+|++|+|||||+|||+.+...+++.|+++. +|+|||+++|++. ++ +.+|++++|++ |
T Consensus 138 ~~LS~G~~~rv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~-~~~tii~~sh~~~-~~-~~~d~i~~l~~-g 213 (229)
T cd03254 138 GNLSQGERQLLAIARAMLRDPKILILDEATSNIDTETEKLIQEALEKLM-KGRTSIIIAHRLS-TI-KNADKILVLDD-G 213 (229)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc-CCCEEEEEecCHH-HH-hhCCEEEEEeC-C
Confidence 6899999999999999999999999999999999999999999999985 5899999999986 34 56999999985 7
Q ss_pred EEEEEcCC
Q 000524 1077 QEIYVGPL 1084 (1444)
Q Consensus 1077 ~~~y~G~~ 1084 (1444)
++++.|+.
T Consensus 214 ~~~~~~~~ 221 (229)
T cd03254 214 KIIEEGTH 221 (229)
T ss_pred eEEEeCCH
Confidence 88888764
No 481
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-32 Score=313.02 Aligned_cols=213 Identities=29% Similarity=0.393 Sum_probs=168.6
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC-----CCeecEEEECCccCCCCCc---cceEEEEcCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS-----LKVSGRVTYNGHDMGEFVP---ERTAAYISQHDN 236 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~-----~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~ 236 (1444)
+.+|+|+|+.|++|++++|+|||||||||||++|+|.++|+ ...+|+|.++|+++..... ++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 35999999999999999999999999999999999999874 1137999999998764332 346899999987
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1444)
.++.+||+||+.++...... .. +..+ .+....++.+++.+||++..++.
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~--~~-------------~~~~---------------~~~~~~~~~~l~~~~l~~~~~~~- 142 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHAR--RA-------------GALT---------------HRDGEIAWQALALAGATALVGRD- 142 (272)
T ss_pred CCCCCcHHHHHhhccccccc--cc-------------ccCC---------------HHHHHHHHHHHHHcCcHhhhcCC-
Confidence 66779999999875311000 00 0000 00112356788999998665544
Q ss_pred cCccccccchhhhhHHHHHHHHh---------cCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchh
Q 000524 317 GDEMIRGISGGERKRVTTGEMMV---------GPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPE 387 (1444)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~---------~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~ 387 (1444)
+..|||||||||+||++|+ .+|++|+|||||+|||+.+...+.+.|+++.+..+ ++|+.++|...+
T Consensus 143 ----~~~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~-~tviiisH~~~~ 217 (272)
T PRK13547 143 ----VTTLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWN-LGVLAIVHDPNL 217 (272)
T ss_pred ----cccCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcC-CEEEEEECCHHH
Confidence 4479999999999999999 59999999999999999999999999999865334 445557788888
Q ss_pred HHhhcCeEEEEcCCeEEEecChhhHH
Q 000524 388 TYDLFDDIILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 388 ~~~~fD~vilL~~G~iv~~G~~~~~~ 413 (1444)
+.+++|++++|++|++++.|+.+++.
T Consensus 218 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 243 (272)
T PRK13547 218 AARHADRIAMLADGAIVAHGAPADVL 243 (272)
T ss_pred HHHhCCEEEEEECCeEEEecCHHHHc
Confidence 88999999999999999999987763
No 482
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-32 Score=311.66 Aligned_cols=210 Identities=20% Similarity=0.273 Sum_probs=167.5
Q ss_pred cceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCeecEEEECCccCCCC-----CccceEEEEcCCCC
Q 000524 164 HLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEF-----VPERTAAYISQHDN 236 (1444)
Q Consensus 164 ~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~ 236 (1444)
++.+|+|+|+.++||++++|+||||||||||+++|+|.++|. ...+|+|+++|+++... ..++.++|++|++.
T Consensus 20 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 99 (261)
T PRK14263 20 NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPN 99 (261)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCc
Confidence 356999999999999999999999999999999999999761 01389999999987532 12456999999987
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMV 316 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~v 316 (1444)
++ .+|++||+.++....+.. . +....++.+++.+||.+..+...
T Consensus 100 ~~-~~tv~enl~~~~~~~~~~------~-----------------------------~~~~~~~~~l~~~~l~~~i~~~~ 143 (261)
T PRK14263 100 PF-SMSIFDNVAFGLRLNRYK------G-----------------------------DLGDRVKHALQGAALWDEVKDKL 143 (261)
T ss_pred cc-cccHHHHHHHHHhhcCch------H-----------------------------HHHHHHHHHHHHcCCchhhhhhh
Confidence 77 599999999875432100 0 00123456677888754322222
Q ss_pred cCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEE
Q 000524 317 GDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1444)
Q Consensus 317 g~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1444)
+...+.||||||||++|||||+.+|++++|||||+|||+.+..++.+.|+++. .+ ++++.++|+..++.+++|+|+
T Consensus 144 -~~~~~~LS~G~~qrv~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~--~~-~tii~isH~~~~i~~~~d~v~ 219 (261)
T PRK14263 144 -KVSGLSLSGGQQQRLCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELK--KD-YTIALVTHNMQQAIRVADTTA 219 (261)
T ss_pred -hCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CeEEEEeCCHHHHHHhCCEEE
Confidence 23456799999999999999999999999999999999999999999999874 23 456667888888999999999
Q ss_pred EEc--------CCeEEEecChhhHH
Q 000524 397 LLS--------DGQIVYQGPRELVL 413 (1444)
Q Consensus 397 lL~--------~G~iv~~G~~~~~~ 413 (1444)
+|+ +|++++.|+.+++.
T Consensus 220 ~l~~~~~~~~~~G~i~~~g~~~~~~ 244 (261)
T PRK14263 220 FFSVDISQGTRTGYLVEMGPTAQIF 244 (261)
T ss_pred EEecccccccCCceEEEeCCHHHHH
Confidence 996 89999999988764
No 483
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.1e-32 Score=317.86 Aligned_cols=232 Identities=27% Similarity=0.412 Sum_probs=192.4
Q ss_pred cCcccCCCCceeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEE
Q 000524 836 RGMILPFEPHSLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYIT 915 (1444)
Q Consensus 836 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~ 915 (1444)
..|.+|.+...++.+++.+.. +. .++.+|+|+||.+.|||.+||+||||||||||.++|.|-.. +..
T Consensus 324 ~~m~LP~P~g~L~Ve~l~~~P---Pg--------~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~--p~~ 390 (580)
T COG4618 324 ERMPLPAPQGALSVERLTAAP---PG--------QKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWP--PTS 390 (580)
T ss_pred CCCCCCCCCceeeEeeeeecC---CC--------CCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccc--cCC
Confidence 457788878889999998843 21 34689999999999999999999999999999999999765 358
Q ss_pred EEEEEcCccCCcc---cccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHH-----HHHHHHHHHHHcCCcccc
Q 000524 916 GNITISGYPKKQE---TFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSET-----RKMFIEEVMELVELKPLI 987 (1444)
Q Consensus 916 G~i~i~g~~~~~~---~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~-----~~~~v~~~l~~l~L~~~~ 987 (1444)
|.|++||.+.++. .+-+.+||.||+-.+++ -||.||+. |...+.+.+. +...|+|++ +.+.+-.
T Consensus 391 G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIa-----Rf~~~~d~~kIieAA~lAgvHelI--l~lP~GY 462 (580)
T COG4618 391 GSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIA-----RFGEEADPEKVIEAARLAGVHELI--LRLPQGY 462 (580)
T ss_pred CcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHH-----hccccCCHHHHHHHHHHcChHHHH--HhCcCCc
Confidence 9999999987663 46688999999999886 69999994 3333333332 112233332 4677788
Q ss_pred cccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcc
Q 000524 988 QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFD 1067 (1444)
Q Consensus 988 ~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD 1067 (1444)
||.+|..+ .+||||||||+++||||-.+|.+++||||-|+||.+.+..+.++|..+.++|+|+|+++|.|+ +...+|
T Consensus 463 dT~iG~~G-~~LSgGQRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs--~L~~~D 539 (580)
T COG4618 463 DTRIGEGG-ATLSGGQRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPS--ALASVD 539 (580)
T ss_pred cCccCCCC-CCCCchHHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHH--HHhhcc
Confidence 99999754 689999999999999999999999999999999999999999999999989999999999996 788999
Q ss_pred eEEEEecCcEEEEEcCCCcchhHHHHHHH
Q 000524 1068 ELFLMKRGGQEIYVGPLGRHSCQLISYFE 1096 (1444)
Q Consensus 1068 ~v~ll~~gg~~~y~G~~~~~~~~~~~yF~ 1096 (1444)
+|++|+ +|++--|||. ++++.-..
T Consensus 540 kilvl~-~G~~~~FG~r----~eVLa~~~ 563 (580)
T COG4618 540 KILVLQ-DGRIAAFGPR----EEVLAKVL 563 (580)
T ss_pred eeeeec-CChHHhcCCH----HHHHHHhc
Confidence 999998 5899999997 45555543
No 484
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-32 Score=312.85 Aligned_cols=211 Identities=24% Similarity=0.327 Sum_probs=167.9
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCeecEEEECCccCCCCC----ccceEEEEcCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGEFV----PERTAAYISQHDNHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~~~ 238 (1444)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|. ...+|+|.++|+++.+.. .++.++|++|++.++
T Consensus 34 ~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~l~ 113 (276)
T PRK14271 34 KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPF 113 (276)
T ss_pred EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHhhheEEeccCCccC
Confidence 45899999999999999999999999999999999998751 013899999998876432 246799999998878
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+ +||+||+.++......... .+....++.+++.+||.+..++.. +
T Consensus 114 ~-~tv~eni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~l-~ 158 (276)
T PRK14271 114 P-MSIMDNVLAGVRAHKLVPR---------------------------------KEFRGVAQARLTEVGLWDAVKDRL-S 158 (276)
T ss_pred C-ccHHHHHHHHHHhccCCCH---------------------------------HHHHHHHHHHHHHcCCCchhhhHh-h
Confidence 7 8999999876432110000 001123456678888865332222 2
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
..++.|||||||||+|||+|+.+|++++|||||+|||+.+...+.+.|+++.. + ++|+.++|+.+++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~-~tiiivsH~~~~~~~~~dri~~l 235 (276)
T PRK14271 159 DSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD--R-LTVIIVTHNLAQAARISDRAALF 235 (276)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--C-CEEEEEeCCHHHHHHhCCEEEEE
Confidence 34567999999999999999999999999999999999999999999998753 3 45566788888999999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|++++.|+.+++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 236 FDGRLVEEGPTEQLF 250 (276)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988774
No 485
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-32 Score=309.95 Aligned_cols=210 Identities=22% Similarity=0.352 Sum_probs=163.8
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCC--CCCeecEEEECCccCCCC-----CccceEEEEcCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDS--SLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNHI 238 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 238 (1444)
++|+|+|+++++||+++|+|||||||||||++|+|.+++ ....+|+|.++|+++.+. ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 589999999999999999999999999999999998753 112389999999987531 1245799999998878
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+ +||+||+.++....+.... .+....++.+++.+++.+...... +
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~---------------------------------~~~~~~~~~~l~~~~l~~~l~~~~-~ 141 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK---------------------------------KKLDEIVEKSLKGAALWDEVKDRL-K 141 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH---------------------------------HHHHHHHHHHHHHcCCchhhHHHH-h
Confidence 7 8999999986543221000 001123455566777642111111 2
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .+. +|+.++|+.+++.+.+|+|++|
T Consensus 142 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~~-tiii~sH~~~~~~~~~d~v~~l 218 (250)
T PRK14240 142 KSALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELK--KDY-TIVIVTHNMQQASRISDKTAFF 218 (250)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cCC-eEEEEEeCHHHHHhhCCEEEEE
Confidence 3345799999999999999999999999999999999999999999999874 244 4555777888899999999999
Q ss_pred cCCeEEEecChhhHH
Q 000524 399 SDGQIVYQGPRELVL 413 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~~ 413 (1444)
++|++++.|+.+++.
T Consensus 219 ~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 219 LNGEIVEFGDTVDLF 233 (250)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 486
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-32 Score=309.84 Aligned_cols=208 Identities=23% Similarity=0.347 Sum_probs=164.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CeecEEEECCccCCCC-----CccceEEEEcCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1444)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 459999999999999999999999999999999999987631 1379999999887532 124579999999999
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc----cccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE----VCAD 313 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~----~~~d 313 (1444)
++.+|+.||+.++....+.... + +....++..++.+++. +..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIRDR-D--------------------------------HLMEVAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCCCH-H--------------------------------HHHHHHHHHHHHcCcchhhhhhhc
Confidence 9999999999876432211000 0 0011233445555543 2233
Q ss_pred ccccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcC
Q 000524 314 TMVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFD 393 (1444)
Q Consensus 314 t~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD 393 (1444)
+ .++.||||||||++||++|+.+|++++|||||+|||..+...+.+.|+++++ + ++|+.++|+..++.+.+|
T Consensus 144 ~-----~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tiii~sH~~~~~~~~~d 215 (252)
T PRK14272 144 T-----PATGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK--V-TTIIIVTHNMHQAARVSD 215 (252)
T ss_pred C-----CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEeCCHHHHHHhCC
Confidence 3 3457999999999999999999999999999999999999999999998752 4 555667788888999999
Q ss_pred eEEEEcCCeEEEecChhhHH
Q 000524 394 DIILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 394 ~vilL~~G~iv~~G~~~~~~ 413 (1444)
+|++|++|++++.|+.+++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 487
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=5.3e-32 Score=302.47 Aligned_cols=196 Identities=28% Similarity=0.395 Sum_probs=160.9
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc------cceEEEEcCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHDNHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 238 (1444)
+++|+|+|+++++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQ---EGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLL 94 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhc
Confidence 56999999999999999999999999999999999999987 9999999998754322 35799999999889
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+.+|+.||+.++........ . .+....++++++.+||.+..+..+
T Consensus 95 ~~~t~~~n~~~~~~~~~~~~---------~------------------------~~~~~~~~~~l~~~~l~~~~~~~~-- 139 (220)
T TIGR02982 95 GFLTARQNVQMALELQPNLS---------Y------------------------QEARERARAMLEAVGLGDHLDYYP-- 139 (220)
T ss_pred CCCCHHHHHHHHHHhccCCC---------H------------------------HHHHHHHHHHHHHcCChhhhhcCh--
Confidence 98999999998653221000 0 001124567889999987666544
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
+.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++....++|+|+ ++|... +.+.+|+|++|
T Consensus 140 ---~~lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~-~sh~~~-~~~~~d~v~~l 214 (220)
T TIGR02982 140 ---HNLSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILI-VTHDNR-ILDVADRIVHM 214 (220)
T ss_pred ---hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEE-EeCCHH-HHhhCCEEEEE
Confidence 5799999999999999999999999999999999999999999999986534555555 555554 56899999999
Q ss_pred cCCeE
Q 000524 399 SDGQI 403 (1444)
Q Consensus 399 ~~G~i 403 (1444)
++|++
T Consensus 215 ~~g~~ 219 (220)
T TIGR02982 215 EDGKL 219 (220)
T ss_pred ECCEE
Confidence 99986
No 488
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.2e-32 Score=315.23 Aligned_cols=221 Identities=23% Similarity=0.298 Sum_probs=175.6
Q ss_pred eeEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCC---ceEEEEEEEcC
Q 000524 846 SLTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTG---GYITGNITISG 922 (1444)
Q Consensus 846 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~---~~~~G~i~i~g 922 (1444)
.+.++|+++.+. .+.+|+++|++|++||+++|+|+|||||||||++|+|.... .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 588999988763 24699999999999999999999999999999999997532 13589999999
Q ss_pred ccCCc-----ccccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCC---------CC-CHHHHHHHHHHHHHHcCCcccc
Q 000524 923 YPKKQ-----ETFARISGYCEQNDIHSPFVTVYESLLYSAWLRLPP---------EV-DSETRKMFIEEVMELVELKPLI 987 (1444)
Q Consensus 923 ~~~~~-----~~~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~---------~~-~~~~~~~~v~~~l~~l~L~~~~ 987 (1444)
.++.. ...++.++|++|+..+++ .||+||+.+....+... .. ..+..++.++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87542 123567999999988777 59999999864322100 01 1122345688999999885422
Q ss_pred cccccCCCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcc
Q 000524 988 QSLVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFD 1067 (1444)
Q Consensus 988 ~~~vg~~~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD 1067 (1444)
..... ..+..||||||||++||++|+.+|+||||||||+|||+.++..+++.|+++++ +.|||+++|+++ .+.+.+|
T Consensus 191 ~~~~~-~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLD-DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhc-CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 22221 22468999999999999999999999999999999999999999999999976 589999999986 5778899
Q ss_pred eEE-EEecCcEEEEEcCC
Q 000524 1068 ELF-LMKRGGQEIYVGPL 1084 (1444)
Q Consensus 1068 ~v~-ll~~gg~~~y~G~~ 1084 (1444)
+++ +|++ |++++.|+.
T Consensus 268 ~i~~~l~~-G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLTG-GELVEYDDT 284 (305)
T ss_pred EEEEEecC-CEEEEeCCH
Confidence 974 6675 899999985
No 489
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=5.6e-32 Score=303.30 Aligned_cols=210 Identities=23% Similarity=0.277 Sum_probs=166.3
Q ss_pred eEEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEc--Cc-
Q 000524 847 LTFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITIS--GY- 923 (1444)
Q Consensus 847 ~~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~--g~- 923 (1444)
+.++|+++.++.... ...++.+|+|+|++|++||+++|+|+||||||||+++|+|...+ ..|+|.++ |.
T Consensus 2 l~~~~l~~~~~~~~~------~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~~~g~~ 73 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQ------GGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLP--DSGRILVRHEGAW 73 (224)
T ss_pred EEEEeeEEEeecccC------CCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCeEEEecCCCc
Confidence 567888877642100 00124699999999999999999999999999999999998653 47999998 42
Q ss_pred -cCCc---cc----ccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCccc-ccccccCC
Q 000524 924 -PKKQ---ET----FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPL-IQSLVGLP 994 (1444)
Q Consensus 924 -~~~~---~~----~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~-~~~~vg~~ 994 (1444)
+... .. .++.++|++|++.+++.+||.|++.+..... ....+...+.+.++++.+++.+. .+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~---~~~~~~~~~~~~~~l~~~~l~~~~~~~~---- 146 (224)
T TIGR02324 74 VDLAQASPREVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLER---GVPREAARARARELLARLNIPERLWHLP---- 146 (224)
T ss_pred cchhhcCHHHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHcCCchhhhhCC----
Confidence 3221 11 1346899999998899999999998764332 12233344567889999999763 3443
Q ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhcceEEEEe
Q 000524 995 GVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFDAFDELFLMK 1073 (1444)
Q Consensus 995 ~~~~lSgGqrkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~~fD~v~ll~ 1073 (1444)
+..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|++. .+.+.+|+++.+.
T Consensus 147 -~~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~-~~~~~~d~i~~~~ 223 (224)
T TIGR02324 147 -PATFSGGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEE-VRELVADRVMDVT 223 (224)
T ss_pred -cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcceeEecC
Confidence 4679999999999999999999999999999999999999999999999877999999999964 4567899998774
No 490
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-32 Score=346.91 Aligned_cols=207 Identities=25% Similarity=0.303 Sum_probs=173.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCC------ccceEEEEcCCC--C
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFV------PERTAAYISQHD--N 236 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~ 236 (1444)
+.+|+|||+.|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++ .
T Consensus 337 ~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~ 413 (623)
T PRK10261 337 VHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQ---GGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYAS 413 (623)
T ss_pred eEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhh
Confidence 46999999999999999999999999999999999999987 999999999876442 135799999987 5
Q ss_pred CCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc-cccccc
Q 000524 237 HIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADTM 315 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt~ 315 (1444)
+++.+||.|++.+.....+...+ .+...+++++|+.+||+ ...+..
T Consensus 414 l~~~~tv~~~l~~~~~~~~~~~~---------------------------------~~~~~~~~~~L~~~gL~~~~~~~~ 460 (623)
T PRK10261 414 LDPRQTVGDSIMEPLRVHGLLPG---------------------------------KAAAARVAWLLERVGLLPEHAWRY 460 (623)
T ss_pred cCCCCCHHHHHHHHHHHcCCCCH---------------------------------HHHHHHHHHHHHHcCCCHHHhhCC
Confidence 88999999999886543211000 00123456789999996 455655
Q ss_pred ccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeE
Q 000524 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1444)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1444)
+ ..|||||||||+||+||+.+|++|||||||+|||..++.++.+.|+++.+.. +.+|+.++|+...+.+++|+|
T Consensus 461 ~-----~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~-g~tvi~isHdl~~v~~~~dri 534 (623)
T PRK10261 461 P-----HEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDF-GIAYLFISHDMAVVERISHRV 534 (623)
T ss_pred c-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHhCCEE
Confidence 4 4799999999999999999999999999999999999999999999987543 455666889999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000524 396 ILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1444)
++|++|++++.|+.+++.
T Consensus 535 ~vl~~G~iv~~g~~~~i~ 552 (623)
T PRK10261 535 AVMYLGQIVEIGPRRAVF 552 (623)
T ss_pred EEEECCEEEEecCHHHHh
Confidence 999999999999998874
No 491
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=3.5e-32 Score=309.10 Aligned_cols=201 Identities=26% Similarity=0.387 Sum_probs=166.5
Q ss_pred EeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCCCH
Q 000524 167 ILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMTV 243 (1444)
Q Consensus 167 iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV 243 (1444)
+|+|+|+.+++|++++|+||||||||||+++|+|.++ . +|+|.++|+++....+ ++.++|++|++.+++.+||
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv 86 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-G---SGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPV 86 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-C---CeEEEECCEecCcCCHHHHhhheEEecccCccCCCccH
Confidence 7999999999999999999999999999999999984 3 8999999998765433 2468999999888888999
Q ss_pred HHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCccccc
Q 000524 244 RETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIRG 323 (1444)
Q Consensus 244 ~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~~ 323 (1444)
+||+.+..... . .. .+....++++++.+||++..++.+ +.
T Consensus 87 ~~nl~~~~~~~-~-~~---------------------------------~~~~~~~~~~l~~~~l~~~~~~~~-----~~ 126 (248)
T PRK03695 87 FQYLTLHQPDK-T-RT---------------------------------EAVASALNEVAEALGLDDKLGRSV-----NQ 126 (248)
T ss_pred HHHHHhcCccC-C-Cc---------------------------------HHHHHHHHHHHHHcCCHhHhcCCc-----cc
Confidence 99998753210 0 00 001123567889999987666554 46
Q ss_pred cchhhhhHHHHHHHHhc-------CCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEE
Q 000524 324 ISGGERKRVTTGEMMVG-------PALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDII 396 (1444)
Q Consensus 324 LSGGqrqRvsia~al~~-------~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vi 396 (1444)
||||||||++||+||+. +|++++|||||+|||+.++..+.+.|++++. . +++|+.++|+..++.+++|+++
T Consensus 127 LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~-~-~~tvi~~sH~~~~~~~~~d~i~ 204 (248)
T PRK03695 127 LSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQ-Q-GIAVVMSSHDLNHTLRHADRVW 204 (248)
T ss_pred CCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-C-CCEEEEEecCHHHHHHhCCEEE
Confidence 99999999999999997 6799999999999999999999999998864 3 4456667888888999999999
Q ss_pred EEcCCeEEEecChhhHH
Q 000524 397 LLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 397 lL~~G~iv~~G~~~~~~ 413 (1444)
+|++|++++.|+.+++.
T Consensus 205 ~l~~G~i~~~g~~~~~~ 221 (248)
T PRK03695 205 LLKQGKLLASGRRDEVL 221 (248)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999987653
No 492
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-32 Score=309.73 Aligned_cols=210 Identities=21% Similarity=0.329 Sum_probs=163.8
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCC--CCeecEEEECCccCCC-C---CccceEEEEcCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSS--LKVSGRVTYNGHDMGE-F---VPERTAAYISQHDNHI 238 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~--~~~~G~I~~~G~~~~~-~---~~~~~~~yv~Q~d~~~ 238 (1444)
+.+|+|+|+.+++|++++|+||||||||||+++|+|..+|. ...+|+|.++|.++.. . ..++.++|++|++.++
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~ 95 (249)
T PRK14253 16 NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVADLRIKVGMVFQKPNPF 95 (249)
T ss_pred eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHHHHhheeEEecCCCcC
Confidence 45899999999999999999999999999999999998752 0138999999988742 1 1245799999998888
Q ss_pred CCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccC
Q 000524 239 GEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGD 318 (1444)
Q Consensus 239 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~ 318 (1444)
+ .||+||+.++....+.... + .....++..++.+|+.+...... +
T Consensus 96 ~-~tv~~~l~~~~~~~~~~~~-----~----------------------------~~~~~~~~~~~~~~l~~~~~~~~-~ 140 (249)
T PRK14253 96 P-MSIYENVAYGLRAQGIKDK-----K----------------------------VLDEVVERSLRGAALWDEVKDRL-K 140 (249)
T ss_pred c-ccHHHHHHhHHHhcCCCch-----H----------------------------HHHHHHHHHHHHcCCchhhhHHh-h
Confidence 7 8999999886432211000 0 00112344566667643211111 2
Q ss_pred ccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEE
Q 000524 319 EMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILL 398 (1444)
Q Consensus 319 ~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL 398 (1444)
.....|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ + ++|+.++|...++.+.+|++++|
T Consensus 141 ~~~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~-~tii~~sh~~~~~~~~~d~i~~l 217 (249)
T PRK14253 141 SHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK--N-YTIVIVTHSMQQARRISDRTAFF 217 (249)
T ss_pred cCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--C-CeEEEEecCHHHHHHhCCEEEEE
Confidence 34457999999999999999999999999999999999999999999999753 3 45555777888899999999999
Q ss_pred cCCeEEEecChhhH
Q 000524 399 SDGQIVYQGPRELV 412 (1444)
Q Consensus 399 ~~G~iv~~G~~~~~ 412 (1444)
++|++++.|+.+++
T Consensus 218 ~~G~i~~~g~~~~~ 231 (249)
T PRK14253 218 LMGELVEHDDTQVI 231 (249)
T ss_pred ECCEEEEeCCHHHH
Confidence 99999999998765
No 493
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-32 Score=296.02 Aligned_cols=169 Identities=36% Similarity=0.611 Sum_probs=145.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCeecEEEECCccCCCCCccceEEEEcCCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEFVPERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 242 (1444)
+++|+|+|+.+++|++++|+|||||||||||++|+|... |+ +|+|.++|+++. ...++.++|++|++.+++.+|
T Consensus 20 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~---~G~i~~~g~~~~-~~~~~~i~~~~q~~~~~~~~t 95 (192)
T cd03232 20 RQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVI---TGEILINGRPLD-KNFQRSTGYVEQQDVHSPNLT 95 (192)
T ss_pred eEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCc---ceEEEECCEehH-HHhhhceEEecccCccccCCc
Confidence 469999999999999999999999999999999999863 55 999999998875 223467999999998999999
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCcccccccccCcccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVGDEMIR 322 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg~~~~~ 322 (1444)
|+||+.++..+ +
T Consensus 96 v~~~l~~~~~~--------------------------------------------------~------------------ 107 (192)
T cd03232 96 VREALRFSALL--------------------------------------------------R------------------ 107 (192)
T ss_pred HHHHHHHHHHH--------------------------------------------------h------------------
Confidence 99999864210 0
Q ss_pred ccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCch-hHHhhcCeEEEEcC-
Q 000524 323 GISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAP-ETYDLFDDIILLSD- 400 (1444)
Q Consensus 323 ~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~-~~~~~fD~vilL~~- 400 (1444)
.|||||||||+||++++.+|++++|||||+|||+.++..+.+.|++++. .+.|+|+ ++|..+ ++.+.+|+|++|++
T Consensus 108 ~LSgGe~qrv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii-vtH~~~~~~~~~~d~i~~l~~~ 185 (192)
T cd03232 108 GLSVEQRKRLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLAD-SGQAILC-TIHQPSASIFEKFDRLLLLKRG 185 (192)
T ss_pred cCCHHHhHHHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHH-cCCEEEE-EEcCChHHHHhhCCEEEEEcCC
Confidence 5999999999999999999999999999999999999999999998764 3555555 555555 57889999999999
Q ss_pred CeEEEec
Q 000524 401 GQIVYQG 407 (1444)
Q Consensus 401 G~iv~~G 407 (1444)
|++++.|
T Consensus 186 g~i~~~g 192 (192)
T cd03232 186 GKTVYFG 192 (192)
T ss_pred CeEEeCC
Confidence 9999876
No 494
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.9e-32 Score=308.33 Aligned_cols=211 Identities=18% Similarity=0.263 Sum_probs=165.3
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCC--CeecEEEECCccCCCC-----CccceEEEEcCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSL--KVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1444)
+.+|+|+|+.|++|++++|+||||||||||+++|+|.++|+. ..+|+|.++|.++... ..++.++||+|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 96 (251)
T PRK14249 17 HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNLRKRVGMVFQQPNP 96 (251)
T ss_pred eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHhhceEEEEecCCcc
Confidence 359999999999999999999999999999999999998741 1259999999887532 124679999999988
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1444)
++. ||+||+.++....+.... + +....++..++.+||.+......
T Consensus 97 ~~~-tv~enl~~~~~~~~~~~~-~--------------------------------~~~~~~~~~l~~~~l~~~l~~~~- 141 (251)
T PRK14249 97 FPK-SIFDNVAFGPRMLGTTAQ-S--------------------------------RLDEVVEKSLRQAALWDEVKDNL- 141 (251)
T ss_pred CcC-cHHHHHhhHHHhcCCChh-h--------------------------------HHHHHHHHHHHHhCCchhhhhHh-
Confidence 875 999999987543221000 0 00112344566666643211111
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1444)
+.....|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++. .+ .+|+.++|+..++.+.+|++++
T Consensus 142 ~~~~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~-~tilivsh~~~~~~~~~d~i~~ 218 (251)
T PRK14249 142 HKSGLALSGGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK--QN-YTIAIVTHNMQQAARASDWTGF 218 (251)
T ss_pred hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh--cC-CEEEEEeCCHHHHHhhCCEEEE
Confidence 23456799999999999999999999999999999999999999999999873 34 4556678888899999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000524 398 LSDGQIVYQGPRELVL 413 (1444)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1444)
|++|++++.|+.+++.
T Consensus 219 l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 219 LLTGDLVEYGRTGEIF 234 (251)
T ss_pred EeCCeEEEeCCHHHHH
Confidence 9999999999988764
No 495
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-31 Score=306.12 Aligned_cols=211 Identities=19% Similarity=0.299 Sum_probs=162.2
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCC--CCCCeecEEEECCccCCCC-----CccceEEEEcCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLD--SSLKVSGRVTYNGHDMGEF-----VPERTAAYISQHDNH 237 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 237 (1444)
+.+|+|+|+.+++||+++|+|||||||||||++|+|..+ |+...+|+|.++|.++... ..++.++|++|++.+
T Consensus 18 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 97 (252)
T PRK14255 18 FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVVQLRKQVGMVFQQPNP 97 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHHHhcCeEEEEECCCcc
Confidence 358999999999999999999999999999999999865 3212389999999887431 124579999999888
Q ss_pred CCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccccc
Q 000524 238 IGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTMVG 317 (1444)
Q Consensus 238 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~vg 317 (1444)
++ .||+||+.+..+..+.... +. .+..+...++.+|+........
T Consensus 98 ~~-~tv~~nl~~~~~~~~~~~~-~~--------------------------------~~~~~~~~l~~~~l~~~i~~~~- 142 (252)
T PRK14255 98 FP-FSIYENVIYGLRLAGVKDK-AV--------------------------------LDEAVETSLKQAAIWDEVKDHL- 142 (252)
T ss_pred CC-CcHHHHHHHHHHHcCCCCH-HH--------------------------------HHHHHHHHHHHcCCccchhhHH-
Confidence 87 7999999986543221100 00 0011234455565532111111
Q ss_pred CccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEE
Q 000524 318 DEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIIL 397 (1444)
Q Consensus 318 ~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vil 397 (1444)
+..+..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.. + .+|+.++|+..++.+.+|+|++
T Consensus 143 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~-~tii~vsH~~~~~~~~~d~i~~ 219 (252)
T PRK14255 143 HESALSLSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD--Q-YTIILVTHSMHQASRISDKTAF 219 (252)
T ss_pred hcCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh--C-CEEEEEECCHHHHHHhCCEEEE
Confidence 233457999999999999999999999999999999999999999999998753 3 4555578888889999999999
Q ss_pred EcCCeEEEecChhhHH
Q 000524 398 LSDGQIVYQGPRELVL 413 (1444)
Q Consensus 398 L~~G~iv~~G~~~~~~ 413 (1444)
|++|+++..|+..++.
T Consensus 220 l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 220 FLTGNLIEFADTKQMF 235 (252)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999887763
No 496
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=5.5e-32 Score=297.52 Aligned_cols=190 Identities=24% Similarity=0.293 Sum_probs=156.4
Q ss_pred EEeceeeeeecchhhhhccccCCceEEeeccEEEEeCCeEEEEecCCCCchHHHHhhhcCCCCCceEEEEEEEcCccCCc
Q 000524 848 TFDEVVYSVDMPQEMKLQGVLEDKLVLLNGLSGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGYITGNITISGYPKKQ 927 (1444)
Q Consensus 848 ~~~~v~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~sGaGKTTLl~~L~g~~~~~~~~G~i~i~g~~~~~ 927 (1444)
+++|+++.++ ++.+|+|+|+.+++||+++|+|+||||||||+++|+|.....+..|+|.+||.+...
T Consensus 2 ~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~ 68 (200)
T cd03217 2 EIKDLHVSVG-------------GKEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITD 68 (200)
T ss_pred eEEEEEEEeC-------------CEEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCc
Confidence 5677776653 246999999999999999999999999999999999974212458999999987653
Q ss_pred c---c-ccceEEEEecCCCCCCCCcHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCCcccccccccCCCCCcCCHHH
Q 000524 928 E---T-FARISGYCEQNDIHSPFVTVYESLLYSAWLRLPPEVDSETRKMFIEEVMELVELKPLIQSLVGLPGVSGLSTEQ 1003 (1444)
Q Consensus 928 ~---~-~~~~~gyv~q~~~~~~~lTv~e~l~f~a~lr~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~vg~~~~~~lSgGq 1003 (1444)
. . .++.++|++|++..++..|+++++ +.. ...|||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~~~~~~l----------------------------------~~~-----~~~LS~G~ 109 (200)
T cd03217 69 LPPEERARLGIFLAFQYPPEIPGVKNADFL----------------------------------RYV-----NEGFSGGE 109 (200)
T ss_pred CCHHHHhhCcEEEeecChhhccCccHHHHH----------------------------------hhc-----cccCCHHH
Confidence 2 1 234589999998888888887765 000 13699999
Q ss_pred HHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHH-hcceEEEEecCcEEEEEc
Q 000524 1004 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPGIDIFD-AFDELFLMKRGGQEIYVG 1082 (1444)
Q Consensus 1004 rkRl~ia~~L~~~p~illLDEPTsgLD~~s~~~i~~~l~~~~~~g~tvi~t~Hqps~~i~~-~fD~v~ll~~gg~~~y~G 1082 (1444)
|||++|||+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|++. .+.+ .+|++++|++ |+++..|
T Consensus 110 ~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~-~~~~~~~d~i~~l~~-G~i~~~~ 187 (200)
T cd03217 110 KKRNEILQLLLLEPDLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQR-LLDYIKPDRVHVLYD-GRIVKSG 187 (200)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhhCCEEEEEEC-CEEEEEc
Confidence 99999999999999999999999999999999999999999877899999999986 4555 7999999986 7999998
Q ss_pred CCCcchhHHHHHHH
Q 000524 1083 PLGRHSCQLISYFE 1096 (1444)
Q Consensus 1083 ~~~~~~~~~~~yF~ 1096 (1444)
+. ++.++|.
T Consensus 188 ~~-----~~~~~~~ 196 (200)
T cd03217 188 DK-----ELALEIE 196 (200)
T ss_pred cH-----HHHhhhc
Confidence 63 4455553
No 497
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3e-32 Score=308.25 Aligned_cols=206 Identities=27% Similarity=0.421 Sum_probs=158.5
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCC
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEM 241 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 241 (1444)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++ ..
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~-~~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLF-NR 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhc-cc
Confidence 45899999999999999999999999999999999999987 9999999988754322 45799999998766 47
Q ss_pred CHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHh--CCcccccccccCc
Q 000524 242 TVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVL--GLEVCADTMVGDE 319 (1444)
Q Consensus 242 TV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~l--gL~~~~dt~vg~~ 319 (1444)
||+||+.+... .. .. +...+... ....+.+++.+ |++...+ .
T Consensus 91 tv~~nl~~~~~--~~-~~-~~~~~~~~---------------------------~~~~~~~l~~l~~~~~~~~~-----~ 134 (237)
T cd03252 91 SIRDNIALADP--GM-SM-ERVIEAAK---------------------------LAGAHDFISELPEGYDTIVG-----E 134 (237)
T ss_pred hHHHHhhccCC--CC-CH-HHHHHHHH---------------------------HcCcHHHHHhCcccccchhh-----c
Confidence 99999987432 10 00 00000000 00112334444 4443333 3
Q ss_pred cccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeEEEEc
Q 000524 320 MIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDIILLS 399 (1444)
Q Consensus 320 ~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~vilL~ 399 (1444)
.++.|||||||||+||++|+.+|++++|||||+|||+.+...+.+.|++++ .+.| |+.++|+.+++ +.+|++++|+
T Consensus 135 ~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~--~~~t-iii~sH~~~~~-~~~d~v~~l~ 210 (237)
T cd03252 135 QGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDIC--AGRT-VIIIAHRLSTV-KNADRIIVME 210 (237)
T ss_pred CCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhc--CCCE-EEEEeCCHHHH-HhCCEEEEEE
Confidence 445799999999999999999999999999999999999999999999875 3445 55566666676 4699999999
Q ss_pred CCeEEEecChhhHHH
Q 000524 400 DGQIVYQGPRELVLE 414 (1444)
Q Consensus 400 ~G~iv~~G~~~~~~~ 414 (1444)
+|++++.|+.+++.+
T Consensus 211 ~G~i~~~~~~~~~~~ 225 (237)
T cd03252 211 KGRIVEQGSHDELLA 225 (237)
T ss_pred CCEEEEEcCHHHHHh
Confidence 999999999887653
No 498
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3e-32 Score=312.07 Aligned_cols=198 Identities=23% Similarity=0.226 Sum_probs=159.5
Q ss_pred eEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc---cceEEEEcCCCCCCCCCC
Q 000524 166 TILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP---ERTAAYISQHDNHIGEMT 242 (1444)
Q Consensus 166 ~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 242 (1444)
.+|+|+|+.|++||+++|+|||||||||||++|+|.++ . +|+|.++|.++..... ++.++||+|++.+++ .|
T Consensus 18 ~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~---~G~I~i~g~~i~~~~~~~lr~~i~~v~q~~~lf~-~t 92 (275)
T cd03289 18 AVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-T---EGDIQIDGVSWNSVPLQKWRKAFGVIPQKVFIFS-GT 92 (275)
T ss_pred cceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-C---CcEEEECCEEhhhCCHHHHhhhEEEECCCcccch-hh
Confidence 48999999999999999999999999999999999986 4 8999999998865432 467999999998887 59
Q ss_pred HHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc-------cccccc
Q 000524 243 VRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-------VCADTM 315 (1444)
Q Consensus 243 V~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-------~~~dt~ 315 (1444)
|+||+...... . .+ .+...++.+||. ...||.
T Consensus 93 v~~nl~~~~~~----~-~~------------------------------------~~~~~l~~~gL~~~~~~~p~~l~~~ 131 (275)
T cd03289 93 FRKNLDPYGKW----S-DE------------------------------------EIWKVAEEVGLKSVIEQFPGQLDFV 131 (275)
T ss_pred HHHHhhhccCC----C-HH------------------------------------HHHHHHHHcCCHHHHHhCcccccce
Confidence 99999632110 0 00 011122333333 345667
Q ss_pred ccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeE
Q 000524 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1444)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1444)
+++ ..+.||||||||++||||++.+|++++|||||++||+.+...+.+.|++.. . +++|+.++|..+.+. .+|+|
T Consensus 132 ~~~-~g~~LS~G~~qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~--~-~~tii~isH~~~~i~-~~dri 206 (275)
T cd03289 132 LVD-GGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF--A-DCTVILSEHRIEAML-ECQRF 206 (275)
T ss_pred ecC-CCCCCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc--C-CCEEEEEECCHHHHH-hCCEE
Confidence 765 456899999999999999999999999999999999999999999999753 3 445566777776665 59999
Q ss_pred EEEcCCeEEEecChhhHHH
Q 000524 396 ILLSDGQIVYQGPRELVLE 414 (1444)
Q Consensus 396 ilL~~G~iv~~G~~~~~~~ 414 (1444)
++|++|++++.|++++++.
T Consensus 207 ~vl~~G~i~~~g~~~~l~~ 225 (275)
T cd03289 207 LVIEENKVRQYDSIQKLLN 225 (275)
T ss_pred EEecCCeEeecCCHHHHhh
Confidence 9999999999999999864
No 499
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=6.3e-32 Score=310.49 Aligned_cols=206 Identities=25% Similarity=0.313 Sum_probs=168.9
Q ss_pred ceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCCCc------cceEEEEcCCC--C
Q 000524 165 LTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEFVP------ERTAAYISQHD--N 236 (1444)
Q Consensus 165 ~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d--~ 236 (1444)
+.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++....+ ++.++|++|++ .
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPS---QGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 46999999999999999999999999999999999999887 9999999998765432 45799999997 3
Q ss_pred CCCCCCHHHHHHHhhhh-cCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCc-ccccc
Q 000524 237 HIGEMTVRETLAFSARC-QGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLE-VCADT 314 (1444)
Q Consensus 237 ~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~-~~~dt 314 (1444)
+.+..|+.|++.+.... .... . .+....++.+++.+||. ...++
T Consensus 102 ~~~~~t~~~~l~~~~~~~~~~~----------~------------------------~~~~~~~~~~l~~~gl~~~~~~~ 147 (268)
T PRK10419 102 VNPRKTVREIIREPLRHLLSLD----------K------------------------AERLARASEMLRAVDLDDSVLDK 147 (268)
T ss_pred cCCCCCHHHHHHHHHHhhccCC----------H------------------------HHHHHHHHHHHHHcCCChhHhhC
Confidence 56789999999764321 0000 0 00112456788899996 34554
Q ss_pred cccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCe
Q 000524 315 MVGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDD 394 (1444)
Q Consensus 315 ~vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~ 394 (1444)
. .+.||||||||++||++|+.+|++++|||||+|||..+...+.+.|+++++.. +++|+.++|+..++.+++|+
T Consensus 148 ~-----~~~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~-~~tiiivsH~~~~i~~~~d~ 221 (268)
T PRK10419 148 R-----PPQLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQF-GTACLFITHDLRLVERFCQR 221 (268)
T ss_pred C-----CccCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHc-CcEEEEEECCHHHHHHhCCE
Confidence 3 45799999999999999999999999999999999999999999999886533 45556678888899999999
Q ss_pred EEEEcCCeEEEecChhhHH
Q 000524 395 IILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 395 vilL~~G~iv~~G~~~~~~ 413 (1444)
+++|++|++++.|+.+++.
T Consensus 222 i~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 222 VMVMDNGQIVETQPVGDKL 240 (268)
T ss_pred EEEEECCEEeeeCChhhcc
Confidence 9999999999999988764
No 500
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=4.1e-32 Score=324.38 Aligned_cols=210 Identities=30% Similarity=0.377 Sum_probs=177.4
Q ss_pred ccceEeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhcCCCCCCCeecEEEECCccCCCC-----CccceEEEEcCCC--
Q 000524 163 KHLTILKDVSGIIKPGRMTLLLGPPASGKTTLLLALAGKLDSSLKVSGRVTYNGHDMGEF-----VPERTAAYISQHD-- 235 (1444)
Q Consensus 163 ~~~~iL~~vs~~i~~G~~~~ilGp~GsGKSTLL~~L~G~l~~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d-- 235 (1444)
....+++||||.+++||+++|+|+||||||||.++|+|+++|+ +|+|.++|.+.+-. ..++.+-+|+|++
T Consensus 302 ~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P~---~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~ 378 (539)
T COG1123 302 GEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPPS---SGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYS 378 (539)
T ss_pred cceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEEeCcccccccchhhhhhhheEEEEeCccc
Confidence 4567999999999999999999999999999999999999997 99999999872111 1135677888876
Q ss_pred CCCCCCCHHHHHHHhhhhcCCCchhhHhHHHHHHhhhcCCCCCCCHHHHHHHHHhhhhhhhHHHHHHHHHhCCccccccc
Q 000524 236 NHIGEMTVRETLAFSARCQGVGSRYELLTELARRENEAGIKPDPDIDVYMKAIATEGQEANVITDYYLKVLGLEVCADTM 315 (1444)
Q Consensus 236 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~e~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~dt~ 315 (1444)
.+.|.+||+++|.-......... ..+.+.+++++++..||+..
T Consensus 379 SLnPr~tV~~~i~epL~~~~~~~---------------------------------~~~~~~rv~~ll~~VgL~~~---- 421 (539)
T COG1123 379 SLNPRMTVGDILAEPLRIHGGGS---------------------------------GAERRARVAELLELVGLPPE---- 421 (539)
T ss_pred ccCccccHHHHHHhHHhhhcccc---------------------------------hHHHHHHHHHHHHHcCCCHH----
Confidence 68899999999987765443211 01123467889999999842
Q ss_pred ccCccccccchhhhhHHHHHHHHhcCCccceeecCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEEecCchhHHhhcCeE
Q 000524 316 VGDEMIRGISGGERKRVTTGEMMVGPALALFMDEISTGLDSSTTFQIVNCLKQHVHINSGTAVISLLQPAPETYDLFDDI 395 (1444)
Q Consensus 316 vg~~~~~~LSGGqrqRvsia~al~~~p~vllLDEptsgLDs~t~~~i~~~L~~~~~~~~~t~vi~i~q~~~~~~~~fD~v 395 (1444)
..++.+..|||||||||+|||||+.+|+++++|||||+||++++.+|.+.|+++.++. +.+.+.|+|+..-+..+||+|
T Consensus 422 ~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~-g~t~lfISHDl~vV~~i~drv 500 (539)
T COG1123 422 FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEEL-GLTYLFISHDLAVVRYIADRV 500 (539)
T ss_pred HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHh-CCEEEEEeCCHHHHHhhCceE
Confidence 4456778899999999999999999999999999999999999999999999987654 566777999999999999999
Q ss_pred EEEcCCeEEEecChhhHH
Q 000524 396 ILLSDGQIVYQGPRELVL 413 (1444)
Q Consensus 396 ilL~~G~iv~~G~~~~~~ 413 (1444)
++|++|+||+.||.+++.
T Consensus 501 ~vm~~G~iVE~G~~~~v~ 518 (539)
T COG1123 501 AVMYDGRIVEEGPTEKVF 518 (539)
T ss_pred EEEECCeEEEeCCHHHHh
Confidence 999999999999998884
Done!